0s autopkgtest [14:17:02]: starting date and time: 2025-03-15 14:17:02+0000 0s autopkgtest [14:17:02]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [14:17:02]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.jp_vtrbt/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade mdanalysis --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- lxd -r lxd-armhf-10.145.243.234 lxd-armhf-10.145.243.234:autopkgtest/ubuntu/plucky/armhf 22s autopkgtest [14:17:24]: testbed dpkg architecture: armhf 24s autopkgtest [14:17:26]: testbed apt version: 2.9.33 28s autopkgtest [14:17:30]: @@@@@@@@@@@@@@@@@@@@ test bed setup 30s autopkgtest [14:17:32]: testbed release detected to be: None 39s autopkgtest [14:17:41]: updating testbed package index (apt update) 41s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 42s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 42s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 42s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 42s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 42s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 42s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 42s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [81.0 kB] 42s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1944 B] 42s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 42s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [326 kB] 43s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [12.1 kB] 43s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 43s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [332 B] 43s Get:15 http://ftpmaster.internal/ubuntu plucky/main Sources [1400 kB] 44s Get:16 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 44s Get:17 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 63s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 64s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 64s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 64s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 77s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 79s Fetched 41.0 MB in 38s (1082 kB/s) 80s Reading package lists... 86s autopkgtest [14:18:28]: upgrading testbed (apt dist-upgrade and autopurge) 88s Reading package lists... 89s Building dependency tree... 89s Reading state information... 89s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 89s Starting 2 pkgProblemResolver with broken count: 0 89s Done 90s Entering ResolveByKeep 90s 91s Calculating upgrade... 91s The following packages will be upgraded: 91s libc-bin libc6 locales python3-jinja2 sos strace 92s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s Need to get 8642 kB of archives. 92s After this operation, 23.6 kB of additional disk space will be used. 92s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 94s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 94s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 98s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 98s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 98s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 99s Preconfiguring packages ... 99s Fetched 8642 kB in 7s (1181 kB/s) 99s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 99s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 99s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 100s Setting up libc6:armhf (2.41-1ubuntu2) ... 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 100s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 100s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 100s Setting up libc-bin (2.41-1ubuntu2) ... 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 100s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 100s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 101s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 101s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 101s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 101s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 101s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 101s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 101s Setting up sos (4.9.0-5) ... 102s Setting up locales (2.41-1ubuntu2) ... 103s Generating locales (this might take a while)... 105s en_US.UTF-8... done 105s Generation complete. 105s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 105s Setting up strace (6.13+ds-1ubuntu1) ... 105s Processing triggers for man-db (2.13.0-1) ... 106s Processing triggers for systemd (257.3-1ubuntu3) ... 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 110s Starting pkgProblemResolver with broken count: 0 110s Starting 2 pkgProblemResolver with broken count: 0 110s Done 110s Solving dependencies... 111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 113s autopkgtest [14:18:55]: rebooting testbed after setup commands that affected boot 161s autopkgtest [14:19:43]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 192s autopkgtest [14:20:14]: @@@@@@@@@@@@@@@@@@@@ apt-source mdanalysis 267s Get:1 http://ftpmaster.internal/ubuntu plucky/universe mdanalysis 2.8.0-4build1 (dsc) [2947 B] 267s Get:2 http://ftpmaster.internal/ubuntu plucky/universe mdanalysis 2.8.0-4build1 (tar) [60.8 MB] 267s Get:3 http://ftpmaster.internal/ubuntu plucky/universe mdanalysis 2.8.0-4build1 (diff) [11.2 kB] 267s gpgv: Signature made Tue Mar 4 14:49:32 2025 UTC 267s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 267s gpgv: Can't check signature: No public key 267s dpkg-source: warning: cannot verify inline signature for ./mdanalysis_2.8.0-4build1.dsc: no acceptable signature found 268s autopkgtest [14:21:30]: testing package mdanalysis version 2.8.0-4build1 271s autopkgtest [14:21:33]: build not needed 277s autopkgtest [14:21:39]: test test-mdanalysis: preparing testbed 279s Reading package lists... 279s Building dependency tree... 279s Reading state information... 280s Starting pkgProblemResolver with broken count: 0 280s Starting 2 pkgProblemResolver with broken count: 0 280s Done 281s The following NEW packages will be installed: 281s autoconf automake autopoint autotools-dev blt build-essential cpp cpp-14 281s cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cython3 debhelper 281s debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common 281s dwz fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 281s fonts-lato fonts-lyx fonts-mathjax fonts-urw-base35 g++ g++-14 281s g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-14 281s gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext intltool-debian 281s libaec0 libarchive-zip-perl libasan8 libblas3 libc-dev-bin libc6-dev 281s libcairo2 libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0 libdw1t64 281s libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 281s libfreetype6 libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3 281s libharfbuzz0b libhdf5-310 libhdf5-hl-310 libimagequant0 libisl23 libjbig0 281s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libjs-mathjax 281s libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 liblbfgsb0 281s liblcms2-2 liblerc4 liblzf1 libmpc3 libnetcdf22 libopenjp2-7 libpixman-1-0 281s libpython3-all-dev libpython3-dev libpython3.13 libpython3.13-dev 281s libqhull-r8.0 libraqm0 libsharpyuv0 libstdc++-14-dev libsz2 libtcl8.6 281s libtiff6 libtk8.6 libtool libubsan1 libwebp7 libwebpdemux2 libwebpmux3 281s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1 281s linux-libc-dev m4 po-debconf pybuild-plugin-pyproject python-matplotlib-data 281s python-mdanalysis-doc python3-alabaster python3-all python3-all-dev 281s python3-biopython python3-brotli python3-build python3-cairo python3-cftime 281s python3-citeproc python3-contourpy python3-cycler python3-decorator 281s python3-defusedxml python3-dev python3-docutils python3-duecredit 281s python3-fasteners python3-fonttools python3-freetype python3-fs 281s python3-griddataformats python3-gsd python3-h5py python3-h5py-serial 281s python3-hypothesis python3-imagesize python3-iniconfig python3-installer 281s python3-joblib python3-kiwisolver python3-latexcodec python3-looseversion 281s python3-lxml python3-lz4 python3-matplotlib python3-mda-xdrlib 281s python3-mdanalysis python3-mmtf python3-monotonic python3-mpmath 281s python3-mrcfile python3-msgpack python3-msmb-theme python3-netcdf4 281s python3-networkx python3-numpy python3-numpy-dev python3-pandas 281s python3-pandas-lib python3-pil python3-pil.imagetk python3-platformdirs 281s python3-pluggy python3-pybtex python3-pybtex-docutils 281s python3-pyproject-hooks python3-pytest python3-pytz python3-reportlab 281s python3-rlpycairo python3-roman python3-scipy python3-seaborn 281s python3-sklearn python3-sklearn-lib python3-snowballstemmer 281s python3-sortedcontainers python3-sphinx python3-sphinx-rtd-theme 281s python3-sphinx-sitemap python3-sphinxcontrib.bibtex 281s python3-sphinxcontrib.jquery python3-sympy python3-threadpoolctl python3-tk 281s python3-toml python3-tqdm python3-tz python3-ufolib2 python3-unicodedata2 281s python3-wheel python3.12-tk python3.13-dev python3.13-tk rpcsvc-proto 281s sgml-base sphinx-common sphinx-rtd-theme-common tk8.6-blt2.5 unicode-data 281s w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core zlib1g-dev 282s 0 upgraded, 205 newly installed, 0 to remove and 0 not upgraded. 282s Need to get 205 MB of archives. 282s After this operation, 780 MB of additional disk space will be used. 282s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-lato all 2.015-1 [2781 kB] 284s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy-dev armhf 1:2.2.3+ds-5 [141 kB] 284s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.1-2 [132 kB] 285s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 15-20250222-0ubuntu1 [330 kB] 285s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.1-2 [2091 kB] 286s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:2.2.3+ds-5 [3725 kB] 289s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf sgml-base all 1.31 [11.4 kB] 289s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf m4 armhf 1.4.19-7 [238 kB] 290s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf autoconf all 2.72-3ubuntu1 [383 kB] 290s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf autotools-dev all 20220109.1 [44.9 kB] 290s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf automake all 1:1.17-3ubuntu1 [572 kB] 291s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf autopoint all 0.23.1-1 [619 kB] 291s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libtcl8.6 armhf 8.6.16+dfsg-1 [909 kB] 292s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB] 292s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 293s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 294s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf libfontenc1 armhf 1:1.1.8-1build1 [11.5 kB] 294s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 294s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 294s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf xfonts-utils armhf 1:7.7+7 [90.6 kB] 294s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-urw-base35 all 20200910-8 [11.0 MB] 305s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-2ubuntu1 [37.5 kB] 305s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-2ubuntu1 [114 kB] 305s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 305s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 305s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 305s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf libtk8.6 armhf 8.6.16-1 [686 kB] 306s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-8 [527 kB] 307s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf blt armhf 2.5.3+dfsg-8 [4824 B] 307s Get:30 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-dev-bin armhf 2.41-1ubuntu2 [23.0 kB] 307s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf linux-libc-dev armhf 6.14.0-10.10 [1683 kB] 309s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf libcrypt-dev armhf 1:4.4.38-1 [120 kB] 309s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 309s Get:34 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6-dev armhf 2.41-1ubuntu2 [1396 kB] 310s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf libisl23 armhf 0.27-1 [546 kB] 311s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libmpc3 armhf 1.3.1-1build2 [47.1 kB] 311s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [9220 kB] 321s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14 armhf 14.2.0-17ubuntu3 [1030 B] 321s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [5578 B] 321s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf cpp armhf 4:14.2.0-1ubuntu1 [22.4 kB] 321s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf libcc1-0 armhf 15-20250222-0ubuntu1 [38.9 kB] 321s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 15-20250222-0ubuntu1 [128 kB] 321s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf libasan8 armhf 15-20250222-0ubuntu1 [2955 kB] 324s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf libubsan1 armhf 15-20250222-0ubuntu1 [1191 kB] 325s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-14-dev armhf 14.2.0-17ubuntu3 [897 kB] 326s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [18.0 MB] 345s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14 armhf 14.2.0-17ubuntu3 [506 kB] 345s Get:48 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [1218 B] 345s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf gcc armhf 4:14.2.0-1ubuntu1 [5004 B] 346s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++-14-dev armhf 14.2.0-17ubuntu3 [2573 kB] 348s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [10.5 MB] 358s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14 armhf 14.2.0-17ubuntu3 [21.8 kB] 358s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf g++-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [966 B] 358s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf g++ armhf 4:14.2.0-1ubuntu1 [1084 B] 358s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 358s Get:56 http://ftpmaster.internal/ubuntu plucky/universe armhf cython3 armhf 3.0.11+dfsg-2ubuntu2 [2469 kB] 361s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf libdebhelper-perl all 13.24.1ubuntu2 [95.4 kB] 361s Get:58 http://ftpmaster.internal/ubuntu plucky/main armhf libtool all 2.5.4-4 [168 kB] 361s Get:59 http://ftpmaster.internal/ubuntu plucky/main armhf dh-autoreconf all 20 [16.1 kB] 361s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] 361s Get:61 http://ftpmaster.internal/ubuntu plucky/main armhf libfile-stripnondeterminism-perl all 1.14.1-2 [20.3 kB] 361s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf dh-strip-nondeterminism all 1.14.1-2 [5064 B] 361s Get:63 http://ftpmaster.internal/ubuntu plucky/main armhf libdw1t64 armhf 0.192-4 [243 kB] 362s Get:64 http://ftpmaster.internal/ubuntu plucky/main armhf debugedit armhf 1:5.1-2 [46.7 kB] 362s Get:65 http://ftpmaster.internal/ubuntu plucky/main armhf dwz armhf 0.15-1build6 [116 kB] 362s Get:66 http://ftpmaster.internal/ubuntu plucky/main armhf gettext armhf 0.23.1-1 [1053 kB] 363s Get:67 http://ftpmaster.internal/ubuntu plucky/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] 363s Get:68 http://ftpmaster.internal/ubuntu plucky/main armhf po-debconf all 1.0.21+nmu1 [233 kB] 363s Get:69 http://ftpmaster.internal/ubuntu plucky/main armhf debhelper all 13.24.1ubuntu2 [895 kB] 364s Get:70 http://ftpmaster.internal/ubuntu plucky/universe armhf dh-python all 6.20250308 [118 kB] 364s Get:71 http://ftpmaster.internal/ubuntu plucky/main armhf xml-core all 0.19 [20.3 kB] 364s Get:72 http://ftpmaster.internal/ubuntu plucky/main armhf docutils-common all 0.21.2+dfsg-2 [131 kB] 364s Get:73 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 365s Get:74 http://ftpmaster.internal/ubuntu plucky/universe armhf fonts-lyx all 2.4.3-1 [171 kB] 365s Get:75 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 367s Get:76 http://ftpmaster.internal/ubuntu plucky/universe armhf libaec0 armhf 1.1.3-1 [20.8 kB] 367s Get:77 http://ftpmaster.internal/ubuntu plucky/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 368s Get:78 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 368s Get:79 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 368s Get:80 http://ftpmaster.internal/ubuntu plucky/main armhf libcairo2 armhf 1.18.2-2 [484 kB] 369s Get:81 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.23-1 [38.5 kB] 369s Get:82 http://ftpmaster.internal/ubuntu plucky/main armhf libexpat1-dev armhf 2.6.4-1 [121 kB] 369s Get:83 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 369s Get:84 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.2.0-1 [464 kB] 369s Get:85 http://ftpmaster.internal/ubuntu plucky/universe armhf libsz2 armhf 1.1.3-1 [5302 B] 369s Get:86 http://ftpmaster.internal/ubuntu plucky/universe armhf libhdf5-310 armhf 1.14.5+repack-3 [1410 kB] 371s Get:87 http://ftpmaster.internal/ubuntu plucky/universe armhf libhdf5-hl-310 armhf 1.14.5+repack-3 [58.8 kB] 371s Get:88 http://ftpmaster.internal/ubuntu plucky/main armhf libimagequant0 armhf 2.18.0-1build1 [31.1 kB] 371s Get:89 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8 armhf 2.1.5-3ubuntu2 [127 kB] 371s Get:90 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 371s Get:91 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 371s Get:92 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 371s Get:93 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 372s Get:94 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-sphinxdoc all 8.1.3-4 [30.9 kB] 372s Get:95 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-perl all 4.10000-1 [81.9 kB] 372s Get:96 http://ftpmaster.internal/ubuntu plucky/universe armhf liblbfgsb0 armhf 3.0+dfsg.4-1build1 [27.4 kB] 372s Get:97 http://ftpmaster.internal/ubuntu plucky/main armhf liblcms2-2 armhf 2.16-2 [137 kB] 372s Get:98 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 372s Get:99 http://ftpmaster.internal/ubuntu plucky/universe armhf liblzf1 armhf 3.6-4 [6554 B] 372s Get:100 http://ftpmaster.internal/ubuntu plucky/universe armhf libnetcdf22 armhf 1:4.9.3-1 [459 kB] 373s Get:101 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13 armhf 3.13.2-2 [2079 kB] 375s Get:102 http://ftpmaster.internal/ubuntu plucky/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1ubuntu1 [880 kB] 376s Get:103 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-dev armhf 3.13.2-2 [4265 kB] 380s Get:104 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3-dev armhf 3.13.2-2 [10.7 kB] 380s Get:105 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3-all-dev armhf 3.13.2-2 [910 B] 380s Get:106 http://ftpmaster.internal/ubuntu plucky/universe armhf libqhull-r8.0 armhf 2020.2-6build1 [173 kB] 380s Get:107 http://ftpmaster.internal/ubuntu plucky/main armhf libraqm0 armhf 0.10.2-1 [12.4 kB] 380s Get:108 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 380s Get:109 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 380s Get:110 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 380s Get:111 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB] 380s Get:112 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpdemux2 armhf 1.5.0-0.1 [11.5 kB] 380s Get:113 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpmux3 armhf 1.5.0-0.1 [22.4 kB] 380s Get:114 http://ftpmaster.internal/ubuntu plucky/main armhf libxslt1.1 armhf 1.1.39-0exp1ubuntu2 [152 kB] 381s Get:115 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 381s Get:116 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-toml all 0.10.2-1 [16.5 kB] 381s Get:117 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-wheel all 0.45.1-1 [57.7 kB] 381s Get:118 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-build all 1.2.2-1 [31.0 kB] 381s Get:119 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 381s Get:120 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-pyproject all 6.20250308 [1726 B] 381s Get:121 http://ftpmaster.internal/ubuntu plucky/universe armhf python-matplotlib-data all 3.8.3-7build1 [2934 kB] 384s Get:122 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 389s Get:123 http://ftpmaster.internal/ubuntu plucky/universe armhf python-mdanalysis-doc all 2.8.0-4build1 [3458 kB] 393s Get:124 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all armhf 3.13.2-2 [886 B] 393s Get:125 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-dev armhf 3.13.2-2 [509 kB] 393s Get:126 http://ftpmaster.internal/ubuntu plucky/main armhf python3-dev armhf 3.13.2-2 [26.7 kB] 393s Get:127 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all-dev armhf 3.13.2-2 [912 B] 393s Get:128 http://ftpmaster.internal/ubuntu plucky/main armhf python3.12-tk armhf 3.12.9-1 [113 kB] 393s Get:129 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-tk armhf 3.13.2-2 [103 kB] 394s Get:130 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tk armhf 3.13.1-1 [9770 B] 394s Get:131 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pil.imagetk armhf 11.1.0-5build1 [9226 B] 394s Get:132 http://ftpmaster.internal/ubuntu plucky/main armhf libopenjp2-7 armhf 2.5.3-2 [172 kB] 394s Get:133 http://ftpmaster.internal/ubuntu plucky/main armhf python3-pil armhf 11.1.0-5build1 [435 kB] 394s Get:134 http://ftpmaster.internal/ubuntu plucky/main armhf python3-cairo armhf 1.26.1-2build2 [114 kB] 394s Get:135 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-freetype all 2.5.1-1 [92.3 kB] 394s Get:136 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-rlpycairo all 0.3.0-3 [9130 B] 394s Get:137 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-reportlab all 4.3.1-1 [1137 kB] 395s Get:138 http://ftpmaster.internal/ubuntu plucky/universe armhf w3c-sgml-lib all 1.3-3 [280 kB] 396s Get:139 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-biopython armhf 1.85+dfsg-2build1 [1692 kB] 397s Get:140 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-brotli armhf 1.1.0-2build4 [322 kB] 398s Get:141 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-cftime armhf 1.6.4-2 [212 kB] 398s Get:142 http://ftpmaster.internal/ubuntu plucky/main armhf python3-lxml armhf 5.3.1-1build1 [1282 kB] 399s Get:143 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-citeproc all 0.6.0-3 [98.4 kB] 400s Get:144 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-contourpy armhf 1.3.1-1build1 [195 kB] 400s Get:145 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-cycler all 0.12.1-1 [9716 B] 400s Get:146 http://ftpmaster.internal/ubuntu plucky/main armhf python3-decorator all 5.1.1-5 [10.1 kB] 400s Get:147 http://ftpmaster.internal/ubuntu plucky/main armhf python3-defusedxml all 0.7.1-3 [42.2 kB] 400s Get:148 http://ftpmaster.internal/ubuntu plucky/main armhf python3-roman all 5.0-1 [10.3 kB] 400s Get:149 http://ftpmaster.internal/ubuntu plucky/main armhf python3-docutils all 0.21.2+dfsg-2 [409 kB] 400s Get:150 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-looseversion all 1.3.0-3 [8354 B] 400s Get:151 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-duecredit all 0.10.2-2 [66.0 kB] 400s Get:152 http://ftpmaster.internal/ubuntu plucky/main armhf python3-monotonic all 1.6-3 [5344 B] 400s Get:153 http://ftpmaster.internal/ubuntu plucky/main armhf python3-fasteners all 0.18-2 [12.5 kB] 400s Get:154 http://ftpmaster.internal/ubuntu plucky/main armhf python3-platformdirs all 4.3.6-1 [16.8 kB] 400s Get:155 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fs all 2.4.16-7 [90.8 kB] 401s Get:156 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-lz4 armhf 4.4.0+dfsg-1build1 [25.3 kB] 401s Get:157 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-scipy armhf 1.14.1-4ubuntu2 [16.7 MB] 418s Get:158 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-mpmath all 1.3.0-1 [425 kB] 418s Get:159 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sympy all 1.13.3-5 [4229 kB] 423s Get:160 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-ufolib2 all 0.17.0+dfsg1-1 [33.5 kB] 423s Get:161 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-unicodedata2 armhf 15.1.0+ds-1build3 [357 kB] 424s Get:162 http://ftpmaster.internal/ubuntu plucky/universe armhf unicode-data all 15.1.0-1 [8878 kB] 434s Get:163 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fonttools armhf 4.55.3-2build1 [1462 kB] 435s Get:164 http://ftpmaster.internal/ubuntu plucky/main armhf sphinx-rtd-theme-common all 3.0.2+dfsg-2 [1014 kB] 436s Get:165 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-mrcfile all 1.5.4-2 [116 kB] 436s Get:166 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-griddataformats all 1.0.2-2 [2107 kB] 439s Get:167 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-gsd armhf 3.4.2-2build1 [206 kB] 439s Get:168 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-h5py-serial armhf 3.13.0-1 [1113 kB] 440s Get:169 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-h5py all 3.13.0-1 [7978 B] 440s Get:170 http://ftpmaster.internal/ubuntu plucky/main armhf python3-sortedcontainers all 2.4.0-2 [27.6 kB] 440s Get:171 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-hypothesis all 6.127.4-1 [335 kB] 440s Get:172 http://ftpmaster.internal/ubuntu plucky/main armhf python3-imagesize all 1.4.1-1 [6844 B] 440s Get:173 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 440s Get:174 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-joblib all 1.4.2-3 [205 kB] 441s Get:175 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-kiwisolver armhf 1.4.7-3build1 [57.7 kB] 441s Get:176 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-latexcodec all 3.0.0-1 [16.6 kB] 441s Get:177 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-matplotlib armhf 3.8.3-7build1 [17.3 MB] 458s Get:178 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-mda-xdrlib all 0.2.0-3 [11.4 kB] 458s Get:179 http://ftpmaster.internal/ubuntu plucky/main armhf python3-msgpack armhf 1.0.3-3build4 [80.6 kB] 458s Get:180 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-mmtf all 1.1.3-1 [16.2 kB] 458s Get:181 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-threadpoolctl all 3.1.0-1 [21.3 kB] 458s Get:182 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-tqdm all 4.67.1-2 [92.5 kB] 458s Get:183 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-mdanalysis armhf 2.8.0-4build1 [3854 kB] 463s Get:184 http://ftpmaster.internal/ubuntu plucky/main armhf sphinx-common all 8.1.3-4 [663 kB] 463s Get:185 http://ftpmaster.internal/ubuntu plucky/main armhf python3-alabaster all 0.7.16-0.1 [18.5 kB] 463s Get:186 http://ftpmaster.internal/ubuntu plucky/main armhf python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 463s Get:187 http://ftpmaster.internal/ubuntu plucky/main armhf python3-sphinx all 8.1.3-4 [474 kB] 464s Get:188 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sphinxcontrib.jquery all 4.1-5 [6678 B] 464s Get:189 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sphinx-rtd-theme all 3.0.2+dfsg-2 [23.5 kB] 464s Get:190 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-msmb-theme all 1.2.0-4 [35.4 kB] 464s Get:191 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-netcdf4 armhf 1.7.2-1build4 [601 kB] 464s Get:192 http://ftpmaster.internal/ubuntu plucky/main armhf python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 475s Get:193 http://ftpmaster.internal/ubuntu plucky/main armhf python3-pytz all 2025.1-3 [162 kB] 475s Get:194 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tz all 2025.1-3 [1866 B] 475s Get:195 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas-lib armhf 2.2.3+dfsg-8build1 [4877 kB] 479s Get:196 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas all 2.2.3+dfsg-8build1 [3112 kB] 482s Get:197 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 482s Get:198 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pybtex all 0.24.0-4 [70.0 kB] 482s Get:199 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pybtex-docutils all 1.0.2-1 [7176 B] 482s Get:200 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest all 8.3.5-1 [252 kB] 483s Get:201 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-seaborn all 0.13.2-4.1 [225 kB] 483s Get:202 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sklearn-lib armhf 1.4.2+dfsg-7build2 [4010 kB] 486s Get:203 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sklearn all 1.4.2+dfsg-7build2 [2258 kB] 488s Get:204 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sphinx-sitemap all 2.6.0-1 [6674 B] 488s Get:205 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sphinxcontrib.bibtex all 2.6.2-1 [25.2 kB] 489s Fetched 205 MB in 3min 27s (989 kB/s) 489s Selecting previously unselected package fonts-lato. 489s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 489s Preparing to unpack .../000-fonts-lato_2.015-1_all.deb ... 489s Unpacking fonts-lato (2.015-1) ... 490s Selecting previously unselected package python3-numpy-dev:armhf. 490s Preparing to unpack .../001-python3-numpy-dev_1%3a2.2.3+ds-5_armhf.deb ... 490s Unpacking python3-numpy-dev:armhf (1:2.2.3+ds-5) ... 490s Selecting previously unselected package libblas3:armhf. 490s Preparing to unpack .../002-libblas3_3.12.1-2_armhf.deb ... 490s Unpacking libblas3:armhf (3.12.1-2) ... 490s Selecting previously unselected package libgfortran5:armhf. 490s Preparing to unpack .../003-libgfortran5_15-20250222-0ubuntu1_armhf.deb ... 490s Unpacking libgfortran5:armhf (15-20250222-0ubuntu1) ... 490s Selecting previously unselected package liblapack3:armhf. 490s Preparing to unpack .../004-liblapack3_3.12.1-2_armhf.deb ... 490s Unpacking liblapack3:armhf (3.12.1-2) ... 490s Selecting previously unselected package python3-numpy. 490s Preparing to unpack .../005-python3-numpy_1%3a2.2.3+ds-5_armhf.deb ... 490s Unpacking python3-numpy (1:2.2.3+ds-5) ... 490s Selecting previously unselected package sgml-base. 490s Preparing to unpack .../006-sgml-base_1.31_all.deb ... 490s Unpacking sgml-base (1.31) ... 490s Selecting previously unselected package m4. 490s Preparing to unpack .../007-m4_1.4.19-7_armhf.deb ... 490s Unpacking m4 (1.4.19-7) ... 490s Selecting previously unselected package autoconf. 490s Preparing to unpack .../008-autoconf_2.72-3ubuntu1_all.deb ... 490s Unpacking autoconf (2.72-3ubuntu1) ... 490s Selecting previously unselected package autotools-dev. 490s Preparing to unpack .../009-autotools-dev_20220109.1_all.deb ... 490s Unpacking autotools-dev (20220109.1) ... 490s Selecting previously unselected package automake. 490s Preparing to unpack .../010-automake_1%3a1.17-3ubuntu1_all.deb ... 490s Unpacking automake (1:1.17-3ubuntu1) ... 490s Selecting previously unselected package autopoint. 490s Preparing to unpack .../011-autopoint_0.23.1-1_all.deb ... 490s Unpacking autopoint (0.23.1-1) ... 490s Selecting previously unselected package libtcl8.6:armhf. 490s Preparing to unpack .../012-libtcl8.6_8.6.16+dfsg-1_armhf.deb ... 490s Unpacking libtcl8.6:armhf (8.6.16+dfsg-1) ... 490s Selecting previously unselected package libfreetype6:armhf. 490s Preparing to unpack .../013-libfreetype6_2.13.3+dfsg-1_armhf.deb ... 490s Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... 490s Selecting previously unselected package fonts-dejavu-mono. 490s Preparing to unpack .../014-fonts-dejavu-mono_2.37-8_all.deb ... 490s Unpacking fonts-dejavu-mono (2.37-8) ... 490s Selecting previously unselected package fonts-dejavu-core. 490s Preparing to unpack .../015-fonts-dejavu-core_2.37-8_all.deb ... 491s Unpacking fonts-dejavu-core (2.37-8) ... 491s Selecting previously unselected package libfontenc1:armhf. 491s Preparing to unpack .../016-libfontenc1_1%3a1.1.8-1build1_armhf.deb ... 491s Unpacking libfontenc1:armhf (1:1.1.8-1build1) ... 491s Selecting previously unselected package x11-common. 491s Preparing to unpack .../017-x11-common_1%3a7.7+23ubuntu3_all.deb ... 491s Unpacking x11-common (1:7.7+23ubuntu3) ... 491s Selecting previously unselected package xfonts-encodings. 491s Preparing to unpack .../018-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 491s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 491s Selecting previously unselected package xfonts-utils. 491s Preparing to unpack .../019-xfonts-utils_1%3a7.7+7_armhf.deb ... 491s Unpacking xfonts-utils (1:7.7+7) ... 491s Selecting previously unselected package fonts-urw-base35. 491s Preparing to unpack .../020-fonts-urw-base35_20200910-8_all.deb ... 491s Unpacking fonts-urw-base35 (20200910-8) ... 491s Selecting previously unselected package fontconfig-config. 491s Preparing to unpack .../021-fontconfig-config_2.15.0-2ubuntu1_armhf.deb ... 491s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 491s Selecting previously unselected package libfontconfig1:armhf. 491s Preparing to unpack .../022-libfontconfig1_2.15.0-2ubuntu1_armhf.deb ... 491s Unpacking libfontconfig1:armhf (2.15.0-2ubuntu1) ... 491s Selecting previously unselected package libxrender1:armhf. 491s Preparing to unpack .../023-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 491s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 491s Selecting previously unselected package libxft2:armhf. 491s Preparing to unpack .../024-libxft2_2.3.6-1build1_armhf.deb ... 491s Unpacking libxft2:armhf (2.3.6-1build1) ... 491s Selecting previously unselected package libxss1:armhf. 491s Preparing to unpack .../025-libxss1_1%3a1.2.3-1build3_armhf.deb ... 491s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 491s Selecting previously unselected package libtk8.6:armhf. 491s Preparing to unpack .../026-libtk8.6_8.6.16-1_armhf.deb ... 491s Unpacking libtk8.6:armhf (8.6.16-1) ... 491s Selecting previously unselected package tk8.6-blt2.5. 491s Preparing to unpack .../027-tk8.6-blt2.5_2.5.3+dfsg-8_armhf.deb ... 491s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-8) ... 491s Selecting previously unselected package blt. 491s Preparing to unpack .../028-blt_2.5.3+dfsg-8_armhf.deb ... 491s Unpacking blt (2.5.3+dfsg-8) ... 491s Selecting previously unselected package libc-dev-bin. 491s Preparing to unpack .../029-libc-dev-bin_2.41-1ubuntu2_armhf.deb ... 491s Unpacking libc-dev-bin (2.41-1ubuntu2) ... 491s Selecting previously unselected package linux-libc-dev:armhf. 492s Preparing to unpack .../030-linux-libc-dev_6.14.0-10.10_armhf.deb ... 492s Unpacking linux-libc-dev:armhf (6.14.0-10.10) ... 492s Selecting previously unselected package libcrypt-dev:armhf. 492s Preparing to unpack .../031-libcrypt-dev_1%3a4.4.38-1_armhf.deb ... 492s Unpacking libcrypt-dev:armhf (1:4.4.38-1) ... 492s Selecting previously unselected package rpcsvc-proto. 492s Preparing to unpack .../032-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 492s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 492s Selecting previously unselected package libc6-dev:armhf. 492s Preparing to unpack .../033-libc6-dev_2.41-1ubuntu2_armhf.deb ... 492s Unpacking libc6-dev:armhf (2.41-1ubuntu2) ... 492s Selecting previously unselected package libisl23:armhf. 492s Preparing to unpack .../034-libisl23_0.27-1_armhf.deb ... 492s Unpacking libisl23:armhf (0.27-1) ... 492s Selecting previously unselected package libmpc3:armhf. 492s Preparing to unpack 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.../040-libcc1-0_15-20250222-0ubuntu1_armhf.deb ... 492s Unpacking libcc1-0:armhf (15-20250222-0ubuntu1) ... 492s Selecting previously unselected package libgomp1:armhf. 492s Preparing to unpack .../041-libgomp1_15-20250222-0ubuntu1_armhf.deb ... 492s Unpacking libgomp1:armhf (15-20250222-0ubuntu1) ... 492s Selecting previously unselected package libasan8:armhf. 492s Preparing to unpack .../042-libasan8_15-20250222-0ubuntu1_armhf.deb ... 492s Unpacking libasan8:armhf (15-20250222-0ubuntu1) ... 493s Selecting previously unselected package libubsan1:armhf. 493s Preparing to unpack .../043-libubsan1_15-20250222-0ubuntu1_armhf.deb ... 493s Unpacking libubsan1:armhf (15-20250222-0ubuntu1) ... 493s Selecting previously unselected package libgcc-14-dev:armhf. 493s Preparing to unpack .../044-libgcc-14-dev_14.2.0-17ubuntu3_armhf.deb ... 493s Unpacking libgcc-14-dev:armhf (14.2.0-17ubuntu3) ... 493s Selecting previously unselected package gcc-14-arm-linux-gnueabihf. 493s Preparing to unpack .../045-gcc-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 493s Unpacking gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 493s Selecting previously unselected package gcc-14. 493s Preparing to unpack .../046-gcc-14_14.2.0-17ubuntu3_armhf.deb ... 493s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 493s Selecting previously unselected package gcc-arm-linux-gnueabihf. 493s Preparing to unpack .../047-gcc-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 493s Unpacking gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 493s Selecting previously unselected package gcc. 493s Preparing to unpack .../048-gcc_4%3a14.2.0-1ubuntu1_armhf.deb ... 493s Unpacking gcc (4:14.2.0-1ubuntu1) ... 493s Selecting previously unselected package libstdc++-14-dev:armhf. 493s Preparing to unpack .../049-libstdc++-14-dev_14.2.0-17ubuntu3_armhf.deb ... 493s Unpacking libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 493s Selecting previously unselected package g++-14-arm-linux-gnueabihf. 494s Preparing to unpack .../050-g++-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 494s Unpacking g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 494s Selecting previously unselected package g++-14. 494s Preparing to unpack .../051-g++-14_14.2.0-17ubuntu3_armhf.deb ... 494s Unpacking g++-14 (14.2.0-17ubuntu3) ... 494s Selecting previously unselected package g++-arm-linux-gnueabihf. 494s Preparing to unpack .../052-g++-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 494s Unpacking g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 494s Selecting previously unselected package g++. 494s Preparing to unpack .../053-g++_4%3a14.2.0-1ubuntu1_armhf.deb ... 494s Unpacking g++ (4:14.2.0-1ubuntu1) ... 494s Selecting previously unselected package build-essential. 494s Preparing to unpack .../054-build-essential_12.10ubuntu1_armhf.deb ... 494s Unpacking build-essential (12.10ubuntu1) ... 494s Selecting previously unselected package cython3. 494s Preparing to unpack .../055-cython3_3.0.11+dfsg-2ubuntu2_armhf.deb ... 494s Unpacking cython3 (3.0.11+dfsg-2ubuntu2) ... 494s Selecting previously unselected package libdebhelper-perl. 494s Preparing to unpack .../056-libdebhelper-perl_13.24.1ubuntu2_all.deb ... 494s Unpacking libdebhelper-perl (13.24.1ubuntu2) ... 494s Selecting previously unselected package libtool. 494s Preparing to unpack .../057-libtool_2.5.4-4_all.deb ... 494s Unpacking libtool (2.5.4-4) ... 494s Selecting previously unselected package dh-autoreconf. 494s Preparing to unpack .../058-dh-autoreconf_20_all.deb ... 494s Unpacking dh-autoreconf (20) ... 494s Selecting previously unselected package libarchive-zip-perl. 494s Preparing to unpack .../059-libarchive-zip-perl_1.68-1_all.deb ... 494s Unpacking libarchive-zip-perl (1.68-1) ... 494s Selecting previously unselected package libfile-stripnondeterminism-perl. 494s Preparing to unpack .../060-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... 494s Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... 494s Selecting previously unselected package dh-strip-nondeterminism. 494s Preparing to unpack .../061-dh-strip-nondeterminism_1.14.1-2_all.deb ... 494s Unpacking dh-strip-nondeterminism (1.14.1-2) ... 494s Selecting previously unselected package libdw1t64:armhf. 494s Preparing to unpack .../062-libdw1t64_0.192-4_armhf.deb ... 494s Unpacking libdw1t64:armhf (0.192-4) ... 494s Selecting previously unselected package debugedit. 494s Preparing to unpack .../063-debugedit_1%3a5.1-2_armhf.deb ... 494s Unpacking debugedit (1:5.1-2) ... 494s Selecting previously unselected package dwz. 494s Preparing to unpack .../064-dwz_0.15-1build6_armhf.deb ... 494s Unpacking dwz (0.15-1build6) ... 494s Selecting previously unselected package gettext. 494s Preparing to unpack .../065-gettext_0.23.1-1_armhf.deb ... 494s Unpacking gettext (0.23.1-1) ... 494s Selecting previously unselected package intltool-debian. 494s Preparing to unpack .../066-intltool-debian_0.35.0+20060710.6_all.deb ... 494s Unpacking intltool-debian (0.35.0+20060710.6) ... 494s Selecting previously unselected package po-debconf. 494s Preparing to unpack .../067-po-debconf_1.0.21+nmu1_all.deb ... 494s Unpacking po-debconf (1.0.21+nmu1) ... 494s Selecting previously unselected package debhelper. 495s Preparing to unpack .../068-debhelper_13.24.1ubuntu2_all.deb ... 495s Unpacking debhelper (13.24.1ubuntu2) ... 495s Selecting previously unselected package dh-python. 495s Preparing to unpack .../069-dh-python_6.20250308_all.deb ... 495s Unpacking dh-python (6.20250308) ... 495s Selecting previously unselected package xml-core. 495s Preparing to unpack .../070-xml-core_0.19_all.deb ... 495s Unpacking xml-core (0.19) ... 495s Selecting previously unselected package docutils-common. 495s Preparing to unpack .../071-docutils-common_0.21.2+dfsg-2_all.deb ... 495s Unpacking docutils-common (0.21.2+dfsg-2) ... 495s Selecting previously unselected package fonts-font-awesome. 495s Preparing to unpack .../072-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 495s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 495s Selecting previously unselected package fonts-lyx. 495s Preparing to unpack .../073-fonts-lyx_2.4.3-1_all.deb ... 495s Unpacking fonts-lyx (2.4.3-1) ... 495s Selecting previously unselected package fonts-mathjax. 495s Preparing to unpack .../074-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 495s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 495s Selecting previously unselected package libaec0:armhf. 495s Preparing to unpack .../075-libaec0_1.1.3-1_armhf.deb ... 495s Unpacking libaec0:armhf (1.1.3-1) ... 495s Selecting previously unselected package libpixman-1-0:armhf. 495s Preparing to unpack .../076-libpixman-1-0_0.44.0-3_armhf.deb ... 495s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 495s Selecting previously unselected package libxcb-render0:armhf. 495s Preparing to unpack .../077-libxcb-render0_1.17.0-2_armhf.deb ... 495s Unpacking libxcb-render0:armhf (1.17.0-2) ... 495s Selecting previously unselected package libxcb-shm0:armhf. 495s Preparing to unpack .../078-libxcb-shm0_1.17.0-2_armhf.deb ... 495s Unpacking libxcb-shm0:armhf (1.17.0-2) ... 495s Selecting previously unselected package libcairo2:armhf. 495s Preparing to unpack .../079-libcairo2_1.18.2-2_armhf.deb ... 495s Unpacking libcairo2:armhf (1.18.2-2) ... 495s Selecting previously unselected package libdeflate0:armhf. 495s Preparing to unpack .../080-libdeflate0_1.23-1_armhf.deb ... 495s Unpacking libdeflate0:armhf (1.23-1) ... 495s Selecting previously unselected package libexpat1-dev:armhf. 495s Preparing to unpack .../081-libexpat1-dev_2.6.4-1_armhf.deb ... 495s Unpacking libexpat1-dev:armhf (2.6.4-1) ... 495s Selecting previously unselected package libgraphite2-3:armhf. 495s Preparing to unpack .../082-libgraphite2-3_1.3.14-2ubuntu1_armhf.deb ... 495s Unpacking libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 495s Selecting previously unselected package libharfbuzz0b:armhf. 495s Preparing to unpack .../083-libharfbuzz0b_10.2.0-1_armhf.deb ... 495s Unpacking libharfbuzz0b:armhf (10.2.0-1) ... 495s Selecting previously unselected package libsz2:armhf. 495s Preparing to unpack .../084-libsz2_1.1.3-1_armhf.deb ... 495s Unpacking libsz2:armhf (1.1.3-1) ... 496s Selecting previously unselected package libhdf5-310:armhf. 496s Preparing to unpack .../085-libhdf5-310_1.14.5+repack-3_armhf.deb ... 496s Unpacking libhdf5-310:armhf (1.14.5+repack-3) ... 496s Selecting previously unselected package libhdf5-hl-310:armhf. 496s Preparing to unpack .../086-libhdf5-hl-310_1.14.5+repack-3_armhf.deb ... 496s Unpacking libhdf5-hl-310:armhf (1.14.5+repack-3) ... 496s Selecting previously unselected package libimagequant0:armhf. 496s Preparing to unpack .../087-libimagequant0_2.18.0-1build1_armhf.deb ... 496s Unpacking libimagequant0:armhf (2.18.0-1build1) ... 496s Selecting previously unselected package libjpeg-turbo8:armhf. 496s Preparing to unpack .../088-libjpeg-turbo8_2.1.5-3ubuntu2_armhf.deb ... 496s Unpacking libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 496s Selecting previously unselected package libjpeg8:armhf. 496s Preparing to unpack .../089-libjpeg8_8c-2ubuntu11_armhf.deb ... 496s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 496s Selecting previously unselected package libjs-jquery. 496s Preparing to unpack .../090-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 496s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 496s Selecting previously unselected package libjs-jquery-ui. 496s Preparing to unpack .../091-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 496s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 496s Selecting previously unselected package libjs-underscore. 496s Preparing to unpack .../092-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 496s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 496s Selecting previously unselected package libjs-sphinxdoc. 496s Preparing to unpack .../093-libjs-sphinxdoc_8.1.3-4_all.deb ... 496s Unpacking libjs-sphinxdoc (8.1.3-4) ... 496s Selecting previously unselected package libjson-perl. 496s Preparing to unpack .../094-libjson-perl_4.10000-1_all.deb ... 496s Unpacking libjson-perl (4.10000-1) ... 496s Selecting previously unselected package liblbfgsb0:armhf. 496s Preparing to unpack .../095-liblbfgsb0_3.0+dfsg.4-1build1_armhf.deb ... 496s Unpacking liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 496s Selecting previously unselected package liblcms2-2:armhf. 496s Preparing to unpack .../096-liblcms2-2_2.16-2_armhf.deb ... 496s Unpacking liblcms2-2:armhf (2.16-2) ... 496s Selecting previously unselected package liblerc4:armhf. 496s Preparing to unpack .../097-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 496s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 496s Selecting previously unselected package liblzf1:armhf. 496s Preparing to unpack .../098-liblzf1_3.6-4_armhf.deb ... 496s Unpacking liblzf1:armhf (3.6-4) ... 496s Selecting previously unselected package libnetcdf22:armhf. 496s Preparing to unpack .../099-libnetcdf22_1%3a4.9.3-1_armhf.deb ... 496s Unpacking libnetcdf22:armhf (1:4.9.3-1) ... 496s Selecting previously unselected package libpython3.13:armhf. 496s Preparing to unpack .../100-libpython3.13_3.13.2-2_armhf.deb ... 496s Unpacking libpython3.13:armhf (3.13.2-2) ... 496s Selecting previously unselected package zlib1g-dev:armhf. 496s Preparing to unpack .../101-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_armhf.deb ... 496s Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 496s Selecting previously unselected package libpython3.13-dev:armhf. 496s Preparing to unpack .../102-libpython3.13-dev_3.13.2-2_armhf.deb ... 496s Unpacking libpython3.13-dev:armhf (3.13.2-2) ... 497s Selecting previously unselected package libpython3-dev:armhf. 497s Preparing to unpack .../103-libpython3-dev_3.13.2-2_armhf.deb ... 497s Unpacking libpython3-dev:armhf (3.13.2-2) ... 497s Selecting previously unselected package libpython3-all-dev:armhf. 497s Preparing to unpack .../104-libpython3-all-dev_3.13.2-2_armhf.deb ... 497s Unpacking libpython3-all-dev:armhf (3.13.2-2) ... 497s Selecting previously unselected package libqhull-r8.0:armhf. 497s Preparing to unpack .../105-libqhull-r8.0_2020.2-6build1_armhf.deb ... 497s Unpacking libqhull-r8.0:armhf (2020.2-6build1) ... 497s Selecting previously unselected package libraqm0:armhf. 497s Preparing to unpack .../106-libraqm0_0.10.2-1_armhf.deb ... 497s Unpacking libraqm0:armhf (0.10.2-1) ... 497s Selecting previously unselected package libsharpyuv0:armhf. 497s Preparing to unpack .../107-libsharpyuv0_1.5.0-0.1_armhf.deb ... 497s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 497s Selecting previously unselected package libjbig0:armhf. 497s Preparing to unpack .../108-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 497s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 497s Selecting previously unselected package libwebp7:armhf. 497s Preparing to unpack .../109-libwebp7_1.5.0-0.1_armhf.deb ... 497s Unpacking libwebp7:armhf (1.5.0-0.1) ... 497s Selecting previously unselected package libtiff6:armhf. 497s Preparing to unpack .../110-libtiff6_4.5.1+git230720-4ubuntu4_armhf.deb ... 497s Unpacking libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 497s Selecting previously unselected package libwebpdemux2:armhf. 497s Preparing to unpack .../111-libwebpdemux2_1.5.0-0.1_armhf.deb ... 497s Unpacking libwebpdemux2:armhf (1.5.0-0.1) ... 497s Selecting previously unselected package libwebpmux3:armhf. 497s Preparing to unpack .../112-libwebpmux3_1.5.0-0.1_armhf.deb ... 497s Unpacking libwebpmux3:armhf (1.5.0-0.1) ... 497s Selecting previously unselected package libxslt1.1:armhf. 497s Preparing to unpack .../113-libxslt1.1_1.1.39-0exp1ubuntu2_armhf.deb ... 497s Unpacking libxslt1.1:armhf (1.1.39-0exp1ubuntu2) ... 497s Selecting previously unselected package python3-pyproject-hooks. 497s Preparing to unpack .../114-python3-pyproject-hooks_1.2.0-1_all.deb ... 497s Unpacking python3-pyproject-hooks (1.2.0-1) ... 497s Selecting previously unselected package python3-toml. 497s Preparing to unpack .../115-python3-toml_0.10.2-1_all.deb ... 497s Unpacking python3-toml (0.10.2-1) ... 497s Selecting previously unselected package python3-wheel. 497s Preparing to unpack .../116-python3-wheel_0.45.1-1_all.deb ... 497s Unpacking python3-wheel (0.45.1-1) ... 497s Selecting previously unselected package python3-build. 497s Preparing to unpack .../117-python3-build_1.2.2-1_all.deb ... 497s Unpacking python3-build (1.2.2-1) ... 497s Selecting previously unselected package python3-installer. 497s Preparing to unpack .../118-python3-installer_0.7.0+dfsg1-3_all.deb ... 497s Unpacking python3-installer (0.7.0+dfsg1-3) ... 497s Selecting previously unselected package pybuild-plugin-pyproject. 497s Preparing to unpack .../119-pybuild-plugin-pyproject_6.20250308_all.deb ... 497s Unpacking pybuild-plugin-pyproject (6.20250308) ... 497s Selecting previously unselected package python-matplotlib-data. 497s Preparing to unpack .../120-python-matplotlib-data_3.8.3-7build1_all.deb ... 497s Unpacking python-matplotlib-data (3.8.3-7build1) ... 497s Selecting previously unselected package libjs-mathjax. 497s Preparing to unpack .../121-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 497s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 498s Selecting previously unselected package python-mdanalysis-doc. 498s Preparing to unpack .../122-python-mdanalysis-doc_2.8.0-4build1_all.deb ... 498s Unpacking python-mdanalysis-doc (2.8.0-4build1) ... 498s Selecting previously unselected package python3-all. 498s Preparing to unpack .../123-python3-all_3.13.2-2_armhf.deb ... 498s Unpacking python3-all (3.13.2-2) ... 499s Selecting previously unselected package python3.13-dev. 499s Preparing to unpack .../124-python3.13-dev_3.13.2-2_armhf.deb ... 499s Unpacking python3.13-dev (3.13.2-2) ... 499s Selecting previously unselected package python3-dev. 499s Preparing to unpack .../125-python3-dev_3.13.2-2_armhf.deb ... 499s Unpacking python3-dev (3.13.2-2) ... 499s Selecting previously unselected package python3-all-dev. 499s Preparing to unpack .../126-python3-all-dev_3.13.2-2_armhf.deb ... 499s Unpacking python3-all-dev (3.13.2-2) ... 499s Selecting previously unselected package python3.12-tk. 499s Preparing to unpack .../127-python3.12-tk_3.12.9-1_armhf.deb ... 499s Unpacking python3.12-tk (3.12.9-1) ... 499s Selecting previously unselected package python3.13-tk. 499s Preparing to unpack .../128-python3.13-tk_3.13.2-2_armhf.deb ... 499s Unpacking python3.13-tk (3.13.2-2) ... 499s Selecting previously unselected package python3-tk:armhf. 499s Preparing to unpack .../129-python3-tk_3.13.1-1_armhf.deb ... 499s Unpacking python3-tk:armhf (3.13.1-1) ... 499s Selecting previously unselected package python3-pil.imagetk:armhf. 499s Preparing to unpack .../130-python3-pil.imagetk_11.1.0-5build1_armhf.deb ... 499s Unpacking python3-pil.imagetk:armhf (11.1.0-5build1) ... 499s Selecting previously unselected package libopenjp2-7:armhf. 499s Preparing to unpack .../131-libopenjp2-7_2.5.3-2_armhf.deb ... 499s Unpacking libopenjp2-7:armhf (2.5.3-2) ... 499s Selecting previously unselected package python3-pil:armhf. 499s Preparing to unpack .../132-python3-pil_11.1.0-5build1_armhf.deb ... 499s Unpacking python3-pil:armhf (11.1.0-5build1) ... 499s Selecting previously unselected package python3-cairo. 499s Preparing to unpack .../133-python3-cairo_1.26.1-2build2_armhf.deb ... 499s Unpacking python3-cairo (1.26.1-2build2) ... 499s Selecting previously unselected package python3-freetype. 499s Preparing to unpack .../134-python3-freetype_2.5.1-1_all.deb ... 499s Unpacking python3-freetype (2.5.1-1) ... 499s Selecting previously unselected package python3-rlpycairo. 499s Preparing to unpack .../135-python3-rlpycairo_0.3.0-3_all.deb ... 499s Unpacking python3-rlpycairo (0.3.0-3) ... 499s Selecting previously unselected package python3-reportlab. 499s Preparing to unpack .../136-python3-reportlab_4.3.1-1_all.deb ... 499s Unpacking python3-reportlab (4.3.1-1) ... 499s Selecting previously unselected package w3c-sgml-lib. 499s Preparing to unpack .../137-w3c-sgml-lib_1.3-3_all.deb ... 499s Unpacking w3c-sgml-lib (1.3-3) ... 499s Selecting previously unselected package python3-biopython. 499s Preparing to unpack .../138-python3-biopython_1.85+dfsg-2build1_armhf.deb ... 499s Unpacking python3-biopython (1.85+dfsg-2build1) ... 499s Selecting previously unselected package python3-brotli. 499s Preparing to unpack .../139-python3-brotli_1.1.0-2build4_armhf.deb ... 499s Unpacking python3-brotli (1.1.0-2build4) ... 500s Selecting previously unselected package python3-cftime. 500s Preparing to unpack .../140-python3-cftime_1.6.4-2_armhf.deb ... 500s Unpacking python3-cftime (1.6.4-2) ... 500s Selecting previously unselected package python3-lxml:armhf. 500s Preparing to unpack .../141-python3-lxml_5.3.1-1build1_armhf.deb ... 500s Unpacking python3-lxml:armhf (5.3.1-1build1) ... 500s Selecting previously unselected package python3-citeproc. 500s Preparing to unpack .../142-python3-citeproc_0.6.0-3_all.deb ... 500s Unpacking python3-citeproc (0.6.0-3) ... 500s Selecting previously unselected package python3-contourpy. 500s Preparing to unpack .../143-python3-contourpy_1.3.1-1build1_armhf.deb ... 500s Unpacking python3-contourpy (1.3.1-1build1) ... 500s Selecting previously unselected package python3-cycler. 500s Preparing to unpack .../144-python3-cycler_0.12.1-1_all.deb ... 500s Unpacking python3-cycler (0.12.1-1) ... 500s Selecting previously unselected package python3-decorator. 500s Preparing to unpack .../145-python3-decorator_5.1.1-5_all.deb ... 500s Unpacking python3-decorator (5.1.1-5) ... 500s Selecting previously unselected package python3-defusedxml. 500s Preparing to unpack .../146-python3-defusedxml_0.7.1-3_all.deb ... 500s Unpacking python3-defusedxml (0.7.1-3) ... 500s Selecting previously unselected package python3-roman. 500s Preparing to unpack .../147-python3-roman_5.0-1_all.deb ... 500s Unpacking python3-roman (5.0-1) ... 500s Selecting previously unselected package python3-docutils. 500s Preparing to unpack .../148-python3-docutils_0.21.2+dfsg-2_all.deb ... 500s Unpacking python3-docutils (0.21.2+dfsg-2) ... 500s Selecting previously unselected package python3-looseversion. 500s Preparing to unpack .../149-python3-looseversion_1.3.0-3_all.deb ... 500s Unpacking python3-looseversion (1.3.0-3) ... 500s Selecting previously unselected package python3-duecredit. 500s Preparing to unpack .../150-python3-duecredit_0.10.2-2_all.deb ... 500s Unpacking python3-duecredit (0.10.2-2) ... 500s Selecting previously unselected package python3-monotonic. 500s Preparing to unpack .../151-python3-monotonic_1.6-3_all.deb ... 500s Unpacking python3-monotonic (1.6-3) ... 500s Selecting previously unselected package python3-fasteners. 500s Preparing to unpack .../152-python3-fasteners_0.18-2_all.deb ... 500s Unpacking python3-fasteners (0.18-2) ... 500s Selecting previously unselected package python3-platformdirs. 500s Preparing to unpack .../153-python3-platformdirs_4.3.6-1_all.deb ... 500s Unpacking python3-platformdirs (4.3.6-1) ... 500s Selecting previously unselected package python3-fs. 500s Preparing to unpack .../154-python3-fs_2.4.16-7_all.deb ... 500s Unpacking python3-fs (2.4.16-7) ... 500s Selecting previously unselected package python3-lz4. 500s Preparing to unpack .../155-python3-lz4_4.4.0+dfsg-1build1_armhf.deb ... 500s Unpacking python3-lz4 (4.4.0+dfsg-1build1) ... 500s Selecting previously unselected package python3-scipy. 500s Preparing to unpack .../156-python3-scipy_1.14.1-4ubuntu2_armhf.deb ... 500s Unpacking python3-scipy (1.14.1-4ubuntu2) ... 501s Selecting previously unselected package python3-mpmath. 501s Preparing to unpack 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python3-fonttools (4.55.3-2build1) ... 502s Selecting previously unselected package sphinx-rtd-theme-common. 502s Preparing to unpack .../163-sphinx-rtd-theme-common_3.0.2+dfsg-2_all.deb ... 502s Unpacking sphinx-rtd-theme-common (3.0.2+dfsg-2) ... 502s Selecting previously unselected package python3-mrcfile. 502s Preparing to unpack .../164-python3-mrcfile_1.5.4-2_all.deb ... 502s Unpacking python3-mrcfile (1.5.4-2) ... 502s Selecting previously unselected package python3-griddataformats. 502s Preparing to unpack .../165-python3-griddataformats_1.0.2-2_all.deb ... 502s Unpacking python3-griddataformats (1.0.2-2) ... 502s Selecting previously unselected package python3-gsd. 502s Preparing to unpack .../166-python3-gsd_3.4.2-2build1_armhf.deb ... 502s Unpacking python3-gsd (3.4.2-2build1) ... 502s Selecting previously unselected package python3-h5py-serial. 502s Preparing to unpack .../167-python3-h5py-serial_3.13.0-1_armhf.deb ... 502s Unpacking python3-h5py-serial (3.13.0-1) ... 502s 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unpack .../173-python3-joblib_1.4.2-3_all.deb ... 503s Unpacking python3-joblib (1.4.2-3) ... 503s Selecting previously unselected package python3-kiwisolver. 503s Preparing to unpack .../174-python3-kiwisolver_1.4.7-3build1_armhf.deb ... 503s Unpacking python3-kiwisolver (1.4.7-3build1) ... 503s Selecting previously unselected package python3-latexcodec. 503s Preparing to unpack .../175-python3-latexcodec_3.0.0-1_all.deb ... 503s Unpacking python3-latexcodec (3.0.0-1) ... 503s Selecting previously unselected package python3-matplotlib. 503s Preparing to unpack .../176-python3-matplotlib_3.8.3-7build1_armhf.deb ... 503s Unpacking python3-matplotlib (3.8.3-7build1) ... 503s Selecting previously unselected package python3-mda-xdrlib. 503s Preparing to unpack .../177-python3-mda-xdrlib_0.2.0-3_all.deb ... 503s Unpacking python3-mda-xdrlib (0.2.0-3) ... 503s Selecting previously unselected package python3-msgpack. 504s Preparing to unpack .../178-python3-msgpack_1.0.3-3build4_armhf.deb ... 504s Unpacking python3-msgpack (1.0.3-3build4) ... 504s Selecting previously unselected package python3-mmtf. 504s Preparing to unpack .../179-python3-mmtf_1.1.3-1_all.deb ... 504s Unpacking python3-mmtf (1.1.3-1) ... 504s Selecting previously unselected package python3-threadpoolctl. 504s Preparing to unpack .../180-python3-threadpoolctl_3.1.0-1_all.deb ... 504s Unpacking python3-threadpoolctl (3.1.0-1) ... 504s Selecting previously unselected package python3-tqdm. 504s Preparing to unpack .../181-python3-tqdm_4.67.1-2_all.deb ... 504s Unpacking python3-tqdm (4.67.1-2) ... 504s Selecting previously unselected package python3-mdanalysis. 504s Preparing to unpack .../182-python3-mdanalysis_2.8.0-4build1_armhf.deb ... 504s Unpacking python3-mdanalysis (2.8.0-4build1) ... 504s Selecting previously unselected package sphinx-common. 504s Preparing to unpack .../183-sphinx-common_8.1.3-4_all.deb ... 504s Unpacking sphinx-common (8.1.3-4) ... 504s Selecting previously unselected package python3-alabaster. 504s Preparing to unpack .../184-python3-alabaster_0.7.16-0.1_all.deb ... 504s Unpacking python3-alabaster (0.7.16-0.1) ... 504s Selecting previously unselected package python3-snowballstemmer. 504s Preparing to unpack .../185-python3-snowballstemmer_2.2.0-4build1_all.deb ... 504s Unpacking python3-snowballstemmer (2.2.0-4build1) ... 504s Selecting previously unselected package python3-sphinx. 504s Preparing to unpack .../186-python3-sphinx_8.1.3-4_all.deb ... 504s Unpacking python3-sphinx (8.1.3-4) ... 504s Selecting previously unselected package python3-sphinxcontrib.jquery. 504s Preparing to unpack .../187-python3-sphinxcontrib.jquery_4.1-5_all.deb ... 504s Unpacking python3-sphinxcontrib.jquery (4.1-5) ... 504s Selecting previously unselected package python3-sphinx-rtd-theme. 504s Preparing to unpack .../188-python3-sphinx-rtd-theme_3.0.2+dfsg-2_all.deb ... 504s Unpacking python3-sphinx-rtd-theme (3.0.2+dfsg-2) ... 504s Selecting previously unselected package python3-msmb-theme. 504s Preparing to unpack .../189-python3-msmb-theme_1.2.0-4_all.deb ... 504s Unpacking python3-msmb-theme (1.2.0-4) ... 505s Selecting previously unselected package python3-netcdf4. 505s Preparing to unpack .../190-python3-netcdf4_1.7.2-1build4_armhf.deb ... 505s Unpacking python3-netcdf4 (1.7.2-1build4) ... 505s Selecting previously unselected package python3-networkx. 505s Preparing to unpack .../191-python3-networkx_3.2.1-4ubuntu1_all.deb ... 505s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 505s Selecting previously unselected package python3-pytz. 505s Preparing to unpack .../192-python3-pytz_2025.1-3_all.deb ... 505s Unpacking python3-pytz (2025.1-3) ... 505s Selecting previously unselected package python3-tz. 505s Preparing to unpack .../193-python3-tz_2025.1-3_all.deb ... 505s Unpacking python3-tz (2025.1-3) ... 506s Selecting previously unselected package python3-pandas-lib:armhf. 506s Preparing to unpack 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511s Setting up python3-platformdirs (4.3.6-1) ... 511s Setting up python3-tz (2025.1-3) ... 511s Setting up libdw1t64:armhf (0.192-4) ... 511s Setting up python3-monotonic (1.6-3) ... 511s Setting up python3-fs (2.4.16-7) ... 512s Setting up unicode-data (15.1.0-1) ... 512s Setting up python3-roman (5.0-1) ... 512s Setting up python3-decorator (5.1.1-5) ... 512s Setting up libfontenc1:armhf (1:1.1.8-1build1) ... 512s Setting up autotools-dev (20220109.1) ... 512s Setting up libblas3:armhf (3.12.1-2) ... 512s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 512s Setting up rpcsvc-proto (1.4.2-0ubuntu7) ... 512s Setting up python3-pyproject-hooks (1.2.0-1) ... 512s Setting up libfreetype6:armhf (2.13.3+dfsg-1) ... 512s Setting up python3-snowballstemmer (2.2.0-4build1) ... 512s Setting up python3-brotli (1.1.0-2build4) ... 512s Setting up liblzf1:armhf (3.6-4) ... 512s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 512s Setting up python3-cycler (0.12.1-1) ... 513s Setting up libimagequant0:armhf (2.18.0-1build1) ... 513s Setting up fonts-dejavu-mono (2.37-8) ... 513s Setting up python3-kiwisolver (1.4.7-3build1) ... 513s Setting up libmpc3:armhf (1.3.1-1build2) ... 513s Setting up python3-numpy-dev:armhf (1:2.2.3+ds-5) ... 513s Setting up cython3 (3.0.11+dfsg-2ubuntu2) ... 514s Setting up libtcl8.6:armhf (8.6.16+dfsg-1) ... 514s Setting up autopoint (0.23.1-1) ... 514s Setting up fonts-dejavu-core (2.37-8) ... 514s Setting up python3-fasteners (0.18-2) ... 514s Setting up libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 514s Setting up python3-toml (0.10.2-1) ... 514s Setting up python3-installer (0.7.0+dfsg1-3) ... 514s Setting up libgfortran5:armhf (15-20250222-0ubuntu1) ... 514s Setting up autoconf (2.72-3ubuntu1) ... 514s Setting up python3-pluggy (1.5.0-1) ... 515s Setting up libwebp7:armhf (1.5.0-0.1) ... 515s Setting up python3-pybtex (0.24.0-4) ... 515s Setting up libubsan1:armhf (15-20250222-0ubuntu1) ... 515s Setting up dwz (0.15-1build6) ... 515s Setting up python3-looseversion (1.3.0-3) ... 515s Setting up libcrypt-dev:armhf (1:4.4.38-1) ... 515s Setting up libasan8:armhf (15-20250222-0ubuntu1) ... 515s Setting up libjson-perl (4.10000-1) ... 515s Setting up libxslt1.1:armhf (1.1.39-0exp1ubuntu2) ... 515s Setting up debugedit (1:5.1-2) ... 515s Setting up libopenjp2-7:armhf (2.5.3-2) ... 515s Setting up libharfbuzz0b:armhf (10.2.0-1) ... 515s Setting up sgml-base (1.31) ... 515s Setting up python3-msgpack (1.0.3-3build4) ... 515s Setting up libxss1:armhf (1:1.2.3-1build3) ... 515s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 515s Setting up libgcc-14-dev:armhf (14.2.0-17ubuntu3) ... 515s Setting up python3-mpmath (1.3.0-1) ... 516s Setting up libisl23:armhf (0.27-1) ... 516s Setting up python3-build (1.2.2-1) ... 516s Setting up libc-dev-bin (2.41-1ubuntu2) ... 516s Setting up python-matplotlib-data (3.8.3-7build1) ... 516s Setting up libwebpmux3:armhf (1.5.0-0.1) ... 516s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 516s Setting up sphinx-rtd-theme-common (3.0.2+dfsg-2) ... 516s Setting up libcc1-0:armhf (15-20250222-0ubuntu1) ... 516s Setting up libsz2:armhf (1.1.3-1) ... 516s Setting up cpp-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 516s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 516s Setting up python3-imagesize (1.4.1-1) ... 516s Setting up libjpeg8:armhf (8c-2ubuntu11) ... 516s Setting up automake (1:1.17-3ubuntu1) ... 516s update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode 516s Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... 516s Setting up python3-sympy (1.13.3-5) ... 523s Setting up liblapack3:armhf (3.12.1-2) ... 523s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 523s Setting up gettext (0.23.1-1) ... 523s Setting up pybuild-plugin-pyproject (6.20250308) ... 523s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 523s Setting up python3-pytest (8.3.5-1) ... 523s Setting up libwebpdemux2:armhf (1.5.0-0.1) ... 523s Setting up python3-hypothesis (6.127.4-1) ... 524s Setting up gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 524s Setting up python3-freetype (2.5.1-1) ... 524s Setting up xfonts-utils (1:7.7+7) ... 524s Setting up intltool-debian (0.35.0+20060710.6) ... 524s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 524s Setting up libraqm0:armhf (0.10.2-1) ... 524s Setting up python3-numpy (1:2.2.3+ds-5) ... 526s Setting up libjs-sphinxdoc (8.1.3-4) ... 526s Setting up cpp-14 (14.2.0-17ubuntu3) ... 526s Setting up dh-strip-nondeterminism (1.14.1-2) ... 526s Setting up libhdf5-310:armhf (1.14.5+repack-3) ... 526s Setting up python3-lxml:armhf (5.3.1-1build1) ... 526s Setting up libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 526s Setting up xml-core (0.19) ... 526s Setting up libc6-dev:armhf (2.41-1ubuntu2) ... 526s Setting up python3-contourpy (1.3.1-1build1) ... 527s Setting up libfontconfig1:armhf (2.15.0-2ubuntu1) ... 527s Setting up libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 527s Setting up cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 527s Setting up liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 527s Setting up gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 527s Setting up python3-mrcfile (1.5.4-2) ... 527s Setting up libhdf5-hl-310:armhf (1.14.5+repack-3) ... 527s Setting up g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 527s Setting up libxft2:armhf (2.3.6-1build1) ... 527s Setting up python3-scipy (1.14.1-4ubuntu2) ... 530s Setting up python3-citeproc (0.6.0-3) ... 531s Setting up po-debconf (1.0.21+nmu1) ... 531s Setting up libtk8.6:armhf (8.6.16-1) ... 531s Setting up python3-pandas-lib:armhf (2.2.3+dfsg-8build1) ... 531s Setting up python3.12-tk (3.12.9-1) ... 531s Setting up libnetcdf22:armhf (1:4.9.3-1) ... 531s Setting up python3-sklearn-lib:armhf (1.4.2+dfsg-7build2) ... 531s Setting up python3-h5py-serial (3.13.0-1) ... 531s Setting up python3-gsd (3.4.2-2build1) ... 531s Setting up python3-mmtf (1.1.3-1) ... 531s Setting up fonts-urw-base35 (20200910-8) ... 532s Setting up libcairo2:armhf (1.18.2-2) ... 532s Setting up python3.13-tk (3.13.2-2) ... 532s Setting up python-mdanalysis-doc (2.8.0-4build1) ... 532s Setting up gcc-14 (14.2.0-17ubuntu3) ... 532s Setting up python3-pil:armhf (11.1.0-5build1) ... 532s Setting up python3-griddataformats (1.0.2-2) ... 532s Setting up libexpat1-dev:armhf (2.6.4-1) ... 532s Setting up python3-pandas (2.2.3+dfsg-8build1) ... 538s Setting up sphinx-common (8.1.3-4) ... 538s Setting up python3-h5py (3.13.0-1) ... 538s Setting up python3-sklearn (1.4.2+dfsg-7build2) ... 540s Setting up python3-cftime (1.6.4-2) ... 540s Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 540s Setting up cpp (4:14.2.0-1ubuntu1) ... 540s Setting up g++-14 (14.2.0-17ubuntu3) ... 540s Setting up python3-netcdf4 (1.7.2-1build4) ... 540s Setting up g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 540s Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... 540s Setting up python3-cairo (1.26.1-2build2) ... 540s Setting up python3-duecredit (0.10.2-2) ... 541s Setting up libtool (2.5.4-4) ... 541s Setting up blt (2.5.3+dfsg-8) ... 541s Setting up python3-tk:armhf (3.13.1-1) ... 541s Setting up gcc (4:14.2.0-1ubuntu1) ... 541s Setting up dh-autoreconf (20) ... 541s Setting up python3-pil.imagetk:armhf (11.1.0-5build1) ... 541s Setting up python3-rlpycairo (0.3.0-3) ... 541s Setting up libpython3.13-dev:armhf (3.13.2-2) ... 541s Setting up python3-reportlab (4.3.1-1) ... 542s Setting up g++ (4:14.2.0-1ubuntu1) ... 542s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 542s Setting up build-essential (12.10ubuntu1) ... 542s Setting up libpython3-dev:armhf (3.13.2-2) ... 542s Setting up python3.13-dev (3.13.2-2) ... 542s Setting up debhelper (13.24.1ubuntu2) ... 542s Setting up libpython3-all-dev:armhf (3.13.2-2) ... 542s Setting up python3-dev (3.13.2-2) ... 542s Setting up python3-all-dev (3.13.2-2) ... 542s Setting up python3-fonttools (4.55.3-2build1) ... 543s Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... 543s Setting up python3-matplotlib (3.8.3-7build1) ... 545s Setting up python3-seaborn (0.13.2-4.1) ... 546s Processing triggers for man-db (2.13.0-1) ... 547s Processing triggers for install-info (7.1.1-1) ... 547s Processing triggers for libc-bin (2.41-1ubuntu2) ... 547s Processing triggers for sgml-base (1.31) ... 547s Setting up docutils-common (0.21.2+dfsg-2) ... 547s Setting up w3c-sgml-lib (1.3-3) ... 577s Setting up python3-biopython (1.85+dfsg-2build1) ... 578s Setting up python3-mdanalysis (2.8.0-4build1) ... 578s Processing triggers for sgml-base (1.31) ... 579s Setting up python3-docutils (0.21.2+dfsg-2) ... 579s Setting up python3-pybtex-docutils (1.0.2-1) ... 579s Setting up python3-sphinx (8.1.3-4) ... 580s Setting up python3-sphinxcontrib.bibtex (2.6.2-1) ... 580s Setting up python3-sphinx-sitemap (2.6.0-1) ... 580s Setting up python3-sphinxcontrib.jquery (4.1-5) ... 580s Setting up python3-sphinx-rtd-theme (3.0.2+dfsg-2) ... 580s Setting up python3-msmb-theme (1.2.0-4) ... 592s autopkgtest [14:26:54]: test test-mdanalysis: [----------------------- 595s skipping tests with SKIP_TEST_LIST=test_all_import[.analysis.hole2] journal.pcbi.1004568 595s ============================= test session starts ============================== 595s platform linux -- Python 3.13.2, pytest-8.3.5, pluggy-1.5.0 -- /usr/bin/python3.13 595s cachedir: .pytest_cache 595s hypothesis profile 'default' -> database=DirectoryBasedExampleDatabase(PosixPath('/tmp/autopkgtest.0yRE7m/build.hps/src/.hypothesis/examples')) 595s rootdir: /tmp/autopkgtest.0yRE7m/build.hps/src 595s plugins: typeguard-4.4.2, hypothesis-6.127.4 606s collecting ... collected 19667 items / 2 deselected / 6 skipped / 19665 selected 606s 606s testsuite/MDAnalysisTests/analysis/test_align.py::TestRotationMatrix::test_rotation_matrix_input[a0-b0-None-0.15785647734415692] PASSED [ 0%] 606s testsuite/MDAnalysisTests/analysis/test_align.py::TestRotationMatrix::test_rotation_matrix_input[a1-b1-weights1-0.13424643502242328] PASSED [ 0%] 606s testsuite/MDAnalysisTests/analysis/test_align.py::TestRotationMatrix::test_list_args PASSED [ 0%] 606s testsuite/MDAnalysisTests/analysis/test_align.py::TestRotationMatrix::test_exception PASSED [ 0%] 607s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_match[True] PASSED [ 0%] 607s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_match[False] PASSED [ 0%] 607s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_nomatch_atoms_raise[True] PASSED [ 0%] 607s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_nomatch_atoms_raise[False] PASSED [ 0%] 608s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_nomatch_residues_raise_empty[True] PASSED [ 0%] 608s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_nomatch_residues_raise_empty[False] PASSED [ 0%] 608s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_toggle_atom_mismatch_default_error PASSED [ 0%] 608s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_toggle_atom_mismatch_kwarg_error PASSED [ 0%] 608s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_toggle_atom_nomatch PASSED [ 0%] 609s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_toggle_atom_nomatch_mismatch_atoms PASSED [ 0%] 609s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_subselection_alignto[resname ALA and name CA-expectation0] PASSED [ 0%] 609s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_subselection_alignto[subselection1-expectation1] PASSED [ 0%] 609s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_subselection_alignto[1234-expectation2] PASSED [ 0%] 609s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_no_atom_masses PASSED [ 0%] 609s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_one_universe_has_masses PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_rmsd PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_rmsd_custom_mass_weights PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_rmsd_custom_weights PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_outfile_default PASSED [ 0%] 611s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_outfile_default_exists PASSED [ 0%] 611s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_step_works PASSED [ 0%] 611s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_deprecated_attribute PASSED [ 0%] 612s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj PASSED [ 0%] 612s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_weighted PASSED [ 0%] 613s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_custom_weights PASSED [ 0%] 613s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_custom_mass_weights PASSED [ 0%] 616s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_partial_fit PASSED [ 0%] 617s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_in_memory PASSED [ 0%] 617s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_writer_kwargs PASSED [ 0%] 617s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_alignto_checks_selections PASSED [ 0%] 617s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_alignto_partial_universe PASSED [ 0%] 617s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_deprecated_attrs PASSED [ 0%] 617s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure PASSED [ 0%] 617s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_mass_weighted PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_select PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_no_ref PASSED [ 0%] 619s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_no_msf PASSED [ 0%] 619s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_mismatch_atoms PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_ref_frame PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_in_memory PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlignmentProcessing::test_importerror_biopython SKIPPED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlignmentProcessing::test_fasta2select_aligned PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlignmentProcessing::test_fasta2select_file SKIPPED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlignmentProcessing::test_fasta2select_ClustalW SKIPPED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlignmentProcessing::test_fasta2select_resids PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_align.py::TestSequenceAlignmentFunction::test_biopython_import_error SKIPPED [ 0%] 621s testsuite/MDAnalysisTests/analysis/test_align.py::TestSequenceAlignmentFunction::test_sequence_alignment PASSED [ 0%] 621s testsuite/MDAnalysisTests/analysis/test_align.py::TestSequenceAlignmentFunction::test_sequence_alignment_deprecation PASSED [ 0%] 621s testsuite/MDAnalysisTests/analysis/test_align.py::TestIterativeAverage::test_iterative_average_default PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_align.py::TestIterativeAverage::test_iterative_average_eps_high PASSED [ 0%] 623s testsuite/MDAnalysisTests/analysis/test_align.py::TestIterativeAverage::test_iterative_average_weights_mass PASSED [ 0%] 624s testsuite/MDAnalysisTests/analysis/test_align.py::TestIterativeAverage::test_iterative_average_convergence_failure PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_align.py::TestIterativeAverage::test_iterative_average_convergence_verbose PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_align.py::test_alignto_reorder_atomgroups PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_atomicdistances.py::TestAtomicDistances::test_ad_exceptions PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_atomicdistances.py::TestAtomicDistances::test_ad_pairwise_dist PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_atomicdistances.py::TestAtomicDistances::test_ad_pairwise_dist_pbc PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_fails_incorrect_n_workers[BackendBase--1] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_fails_incorrect_n_workers[BackendSerial-None] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_fails_incorrect_n_workers[BackendMultiprocessing-string] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_fails_incorrect_n_workers[BackendDask-n_workers3] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_all_backends_give_correct_results[square-iterable0-answer0] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_all_backends_give_correct_results[square-iterable1-answer1] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_all_backends_give_correct_results[noop-iterable2-answer2] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_all_backends_give_correct_results[upper-asdf-answer3] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_get_warnings[BackendSerial-params0-n_workers is ignored when executing with backend='serial'] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_get_errors[BackendDask-params0-module 'dask' is missing. Please install 'dask': https://docs.dask.org/en/stable/install.html] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_base.py::test_incompatible_n_workers PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[Parallelizable-not-existing-backend-2] PASSED [ 0%] 626s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[Parallelizable-not-existing-backend-None] PASSED [ 0%] 626s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[SerialOnly-not-existing-backend-2] PASSED [ 0%] 626s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[SerialOnly-not-existing-backend-None] PASSED [ 0%] 628s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[SerialOnly-multiprocessing-2] PASSED [ 0%] 628s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[SerialOnly-dask-None] PASSED [ 0%] 628s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[ParallelizableWithDaskOnly-multiprocessing-None] PASSED [ 0%] 628s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[ParallelizableWithDaskOnly-multiprocessing-2] PASSED [ 0%] 628s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_works_when_unsupported_backend[Parallelizable-CustomSerialBackend-2] PASSED [ 0%] 629s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_works_when_unsupported_backend[ParallelizableWithDaskOnly-CustomSerialBackend-2] PASSED [ 0%] 629s testsuite/MDAnalysisTests/analysis/test_base.py::test_custom_backend_works[Parallelizable-CustomSerialBackend-1] PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_base.py::test_custom_backend_works[ParallelizableWithDaskOnly-CustomSerialBackend-1] PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_incorrect_custom_backend[Parallelizable-map-1] PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_incorrect_custom_backend[SerialOnly-list-1] PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_incorrect_custom_backend[ParallelizableWithDaskOnly-object-1] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_for_unparallelizable[SerialOnly-CustomSerialBackend-1] PASSED [ 0%] 634s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_for_unparallelizable[SerialOnly-multiprocessing-1] PASSED [ 0%] 634s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_for_unparallelizable[SerialOnly-dask-1] PASSED [ 0%] 634s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step_parallel[client_FrameAnalysis0-run_kwargs0-frames0] PASSED [ 0%] 634s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step_parallel[client_FrameAnalysis0-run_kwargs1-frames1] PASSED [ 0%] 634s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step_parallel[client_FrameAnalysis0-run_kwargs2-frames2] PASSED [ 0%] 634s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step_parallel[client_FrameAnalysis0-run_kwargs3-frames3] PASSED [ 0%] 634s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis0-run_kwargs0-frames0] PASSED [ 0%] 634s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis0-run_kwargs1-frames1] PASSED [ 0%] 634s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis0-run_kwargs2-frames2] PASSED [ 0%] 635s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis0-run_kwargs3-frames3] PASSED [ 0%] 635s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis0-run_kwargs4-frames4] PASSED [ 0%] 635s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs0] PASSED [ 0%] 635s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs1] PASSED [ 0%] 635s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs2] PASSED [ 0%] 635s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs3] PASSED [ 0%] 635s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs4] PASSED [ 0%] 635s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs5] PASSED [ 0%] 635s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs6] PASSED [ 0%] 636s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_bool_fail[client_FrameAnalysis0] PASSED [ 0%] 636s testsuite/MDAnalysisTests/analysis/test_base.py::test_rewind[client_FrameAnalysis0] PASSED [ 0%] 637s testsuite/MDAnalysisTests/analysis/test_base.py::test_frames_times[client_FrameAnalysis0] PASSED [ 0%] 637s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step_parallel[client_FrameAnalysis1-run_kwargs0-frames0] PASSED [ 0%] 637s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step_parallel[client_FrameAnalysis1-run_kwargs1-frames1] PASSED [ 0%] 637s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step_parallel[client_FrameAnalysis1-run_kwargs2-frames2] PASSED [ 0%] 637s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step_parallel[client_FrameAnalysis1-run_kwargs3-frames3] PASSED [ 0%] 637s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis1-run_kwargs0-frames0] PASSED [ 0%] 638s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis1-run_kwargs1-frames1] PASSED [ 0%] 638s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis1-run_kwargs2-frames2] PASSED [ 0%] 639s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis1-run_kwargs3-frames3] PASSED [ 0%] 639s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis1-run_kwargs4-frames4] PASSED [ 0%] 639s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs0] PASSED [ 0%] 639s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs1] PASSED [ 0%] 639s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs2] PASSED [ 0%] 639s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs3] PASSED [ 0%] 639s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs4] PASSED [ 0%] 639s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs5] PASSED [ 0%] 639s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs6] PASSED [ 0%] 639s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_bool_fail[client_FrameAnalysis1] PASSED [ 0%] 640s testsuite/MDAnalysisTests/analysis/test_base.py::test_rewind[client_FrameAnalysis1] PASSED [ 0%] 640s testsuite/MDAnalysisTests/analysis/test_base.py::test_frames_times[client_FrameAnalysis1] PASSED [ 0%] 640s testsuite/MDAnalysisTests/analysis/test_base.py::test_reset_n_parts_to_n_frames PASSED [ 0%] 640s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step[run_kwargs0-frames0] PASSED [ 0%] 640s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step[run_kwargs1-frames1] PASSED [ 0%] 640s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step[run_kwargs2-frames2] PASSED [ 0%] 640s testsuite/MDAnalysisTests/analysis/test_base.py::test_start_stop_step[run_kwargs3-frames3] PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice[run_kwargs0-frames0] PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice[run_kwargs1-frames1] PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice[run_kwargs2-frames2] PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice[run_kwargs3-frames3] PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice[run_kwargs4-frames4] PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_parallelizable_transformations PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_instance_serial_backend PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_verbose PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_warn_nparts_nworkers PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_not_parallelizable[AnalysisBase-False] PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_not_parallelizable[AnalysisFromFunction-True] PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_not_parallelizable[FrameAnalysis-True] PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_verbose_progressbar PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_verbose_progressbar_run PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_verbose_progressbar_run_with_kwargs PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_progressbar_multiprocessing PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_incomplete_defined_analysis PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_old_api PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_filter_baseanalysis_kwargs_VE PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_filter_baseanalysis_kwargs PASSED [ 0%] 641s testsuite/MDAnalysisTests/analysis/test_base.py::test_results_type PASSED [ 0%] 644s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction0-None-None-2-49] PASSED [ 0%] 646s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction0-None-50-2-25] PASSED [ 0%] 649s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction0-20-50-2-15] PASSED [ 0%] 652s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction0-20-50-None-30] PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction_args_content[client_AnalysisFromFunction0] PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction1-None-None-2-49] PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction1-None-50-2-25] PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction1-20-50-2-15] PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction1-20-50-None-30] PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction_args_content[client_AnalysisFromFunction1] PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_base.py::test_analysis_class[client_AnalysisFromFunctionAnalysisClass0] PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_base.py::test_analysis_class_decorator PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_root_selection PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_number_of_frames[client_BAT0] PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_coordinates[client_BAT0] PASSED [ 0%] 654s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_coordinates_single_frame[client_BAT0] PASSED [ 0%] 655s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_reconstruction[client_BAT0] PASSED [ 0%] 655s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_IO[client_BAT0] PASSED [ 0%] 655s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_incorrect_dims[client_BAT0] PASSED [ 0%] 655s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_Cartesian_does_not_modify_input[client_BAT0] PASSED [ 0%] 655s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_number_of_frames[client_BAT1] PASSED [ 0%] 655s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_coordinates[client_BAT1] PASSED [ 0%] 655s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_coordinates_single_frame[client_BAT1] PASSED [ 0%] 655s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_reconstruction[client_BAT1] PASSED [ 0%] 655s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_IO[client_BAT1] PASSED [ 0%] 656s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_incorrect_dims[client_BAT1] PASSED [ 0%] 656s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_Cartesian_does_not_modify_input[client_BAT1] PASSED [ 0%] 656s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_nobonds PASSED [ 0%] 656s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_bad_initial_atom PASSED [ 0%] 656s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_disconnected_atom_group PASSED [ 0%] 658s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_multifragments_atomgroup PASSED [ 0%] 658s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_soft_cut_q PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_soft_cut_q_folded PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_soft_cut_q_unfolded PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_hard_cut_q[r0-2-1] PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_hard_cut_q[r1-1-0] PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_hard_cut_q[r2-1-0.5] PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_hard_cut_q[r3-cutoff3-1] PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_hard_cut_q[r4-cutoff4-0] PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_radius_cut_q[r0-None-2-1] PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_radius_cut_q[r1-None-1-0] PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_radius_cut_q[r2-None-1-0.5] PASSED [ 0%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_contact_matrix PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_new_selection PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_valid_types[(resname ASP GLU) and (name OE* OD*)] PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_valid_types[(resname ARG LYS) and (name NH* NZ)] PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_contacts_selections PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_wrong_types[1] PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_wrong_types[ag1] PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_wrong_types[Universe] PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_wrong_types[USE UPDATING AG] PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_startframe PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_end_zero PASSED [ 1%] 660s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_slicing PASSED [ 1%] 660s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_villin_folded PASSED [ 1%] 661s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_villin_unfolded PASSED [ 1%] 661s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_hard_cut_method PASSED [ 1%] 661s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_radius_cut_method PASSED [ 1%] 661s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_own_method PASSED [ 1%] 661s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_own_method_no_array_cast PASSED [ 1%] 661s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_non_callable_method PASSED [ 1%] 662s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_distance_box[True-expected0] PASSED [ 1%] 663s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_distance_box[False-expected1] PASSED [ 1%] 663s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_warn_deprecated_attr PASSED [ 1%] 663s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_n_initial_contacts[datafiles0-0] PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_n_initial_contacts[datafiles1-41814] PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_q1q2 PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_data.py::test_all_exports PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_shape PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_edges PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_midpoints PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_delta PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_grid PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_origin PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_set_unit_keyerror PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_set_unit_attributeError PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_set_unit_nolength PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_set_density_none PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_set_density_not_in_units PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_parameters_isdensity PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_density_grid_not_density PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_density_value_error PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_density_units_same_density_units PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_density_units_density PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_convert_length_same_length_units PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_convert_length_other_length_units PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_repr PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_length_edges PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_density_edges PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_export_types[float] PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_export_types[double] PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_export_types[int] PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_export_types[byte] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_run[static] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_run[dynamic] PASSED [ 1%] 681s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_sliced PASSED [ 1%] 682s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_userdefn_eqbox PASSED [ 1%] 682s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_userdefn_neqbox PASSED [ 1%] 682s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_userdefn_boxshape PASSED [ 1%] 683s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_warn_userdefn_padding PASSED [ 1%] 683s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_warn_userdefn_smallgrid PASSED [ 1%] 684s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_userdefn_gridcenter_shape PASSED [ 1%] 684s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_userdefn_gridcenter_type PASSED [ 1%] 685s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_userdefn_gridcenter_missing PASSED [ 1%] 685s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_userdefn_xdim_type PASSED [ 1%] 685s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_userdefn_xdim_nanvalue PASSED [ 1%] 686s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_warn_noatomgroup PASSED [ 1%] 686s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_noatomgroup PASSED [ 1%] 687s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_warn_results_deprecated PASSED [ 1%] 687s testsuite/MDAnalysisTests/analysis/test_density.py::TestGridImport::test_absence_griddata PASSED [ 1%] 687s testsuite/MDAnalysisTests/analysis/test_density.py::TestGridImport::test_presence_griddata PASSED [ 1%] 687s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_broken_molecules PASSED [ 1%] 687s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_broken_repaired_molecules PASSED [ 1%] 687s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_temperature PASSED [ 1%] 687s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_non_charges PASSED [ 1%] 687s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_non_neutral PASSED [ 1%] 687s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_free_charges PASSED [ 1%] 688s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_eg PASSED [ 1%] 688s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_dist_weights PASSED [ 1%] 688s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_dist_weights_frames PASSED [ 1%] 689s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_distvalues_ag_universe PASSED [ 1%] 690s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_distvalues_ag_select PASSED [ 1%] 691s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_different_steps PASSED [ 1%] 691s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_transform PASSED [ 1%] 691s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_long_traj PASSED [ 1%] 692s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_updating_atomgroup PASSED [ 1%] 692s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_not_universe_atomgroup_error PASSED [ 1%] 692s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_DistanceMatrix_attr_warning PASSED [ 1%] 693s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral[client_Dihedral0] PASSED [ 1%] 693s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral_single_frame[client_Dihedral0] PASSED [ 1%] 694s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_atomgroup_list[client_Dihedral0] PASSED [ 1%] 694s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_enough_atoms[client_Dihedral0] PASSED [ 1%] 694s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral_attr_warning[client_Dihedral0] PASSED [ 1%] 695s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral[client_Dihedral1] PASSED [ 1%] 695s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral_single_frame[client_Dihedral1] PASSED [ 1%] 696s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_atomgroup_list[client_Dihedral1] PASSED [ 1%] 696s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_enough_atoms[client_Dihedral1] PASSED [ 1%] 696s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral_attr_warning[client_Dihedral1] PASSED [ 1%] 697s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran[client_Ramachandran0] PASSED [ 1%] 697s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran_single_frame[client_Ramachandran0] PASSED [ 1%] 698s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran_residue_selections[client_Ramachandran0] PASSED [ 1%] 698s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_outside_protein_length[client_Ramachandran0] PASSED [ 1%] 699s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_outside_protein_unchecked[client_Ramachandran0] PASSED [ 1%] 699s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran[client_Ramachandran1] PASSED [ 1%] 700s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran_single_frame[client_Ramachandran1] PASSED [ 1%] 700s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran_residue_selections[client_Ramachandran1] PASSED [ 1%] 700s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_outside_protein_length[client_Ramachandran1] PASSED [ 1%] 701s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_outside_protein_unchecked[client_Ramachandran1] PASSED [ 1%] 701s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_protein_ends PASSED [ 1%] 701s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_None_removal PASSED [ 1%] 702s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_plot PASSED [ 1%] 702s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran_attr_warning PASSED [ 1%] 703s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin[client_Janin0] PASSED [ 1%] 704s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_tpr[client_Janin0] PASSED [ 1%] 704s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_residue_selections[client_Janin0] PASSED [ 1%] 705s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin[client_Janin1] PASSED [ 1%] 705s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_tpr[client_Janin1] PASSED [ 1%] 705s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_residue_selections[client_Janin1] PASSED [ 1%] 706s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_single_frame PASSED [ 1%] 706s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_outside_protein_length PASSED [ 1%] 707s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_remove_residues PASSED [ 1%] 707s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_atom_selection PASSED [ 1%] 707s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_plot PASSED [ 1%] 707s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_attr_warning PASSED [ 1%] 707s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_class_is_parallelizable[Dihedral-True] PASSED [ 1%] 707s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_class_is_parallelizable[Ramachandran-True] PASSED [ 1%] 707s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_class_is_parallelizable[Janin-True] PASSED [ 1%] 707s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_supported_backends[Dihedral-backends0] PASSED [ 1%] 708s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_supported_backends[Ramachandran-backends1] PASSED [ 1%] 708s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_supported_backends[Janin-backends2] PASSED [ 1%] 708s testsuite/MDAnalysisTests/analysis/test_distances.py::TestContactMatrix::test_np PASSED [ 1%] 708s testsuite/MDAnalysisTests/analysis/test_distances.py::TestContactMatrix::test_sparse PASSED [ 1%] 708s testsuite/MDAnalysisTests/analysis/test_distances.py::TestContactMatrix::test_box_numpy PASSED [ 1%] 708s testsuite/MDAnalysisTests/analysis/test_distances.py::TestContactMatrix::test_box_sparse PASSED [ 1%] 708s testsuite/MDAnalysisTests/analysis/test_distances.py::TestDist::test_pairwise_dist PASSED [ 1%] 709s testsuite/MDAnalysisTests/analysis/test_distances.py::TestDist::test_pairwise_dist_box PASSED [ 1%] 710s testsuite/MDAnalysisTests/analysis/test_distances.py::TestDist::test_pairwise_dist_offset_effect PASSED [ 1%] 711s testsuite/MDAnalysisTests/analysis/test_distances.py::TestDist::test_offset_calculation PASSED [ 1%] 712s testsuite/MDAnalysisTests/analysis/test_distances.py::TestDist::test_mismatch_exception PASSED [ 1%] 713s testsuite/MDAnalysisTests/analysis/test_distances.py::TestBetween::test_between_simple_case_indices_only PASSED [ 1%] 713s testsuite/MDAnalysisTests/analysis/test_distances.py::TestBetween::test_between_return_type[5.9] PASSED [ 1%] 714s testsuite/MDAnalysisTests/analysis/test_distances.py::TestBetween::test_between_return_type[0.0] PASSED [ 1%] 714s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1ahsA.pdb.gz] PASSED [ 1%] 714s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1bvyF.pdb.gz] PASSED [ 1%] 714s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1dx5I.pdb.gz] PASSED [ 1%] 714s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1eteA.pdb.gz] PASSED [ 1%] 715s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1h4aX.pdb.gz] PASSED [ 1%] 715s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1i8nA.pdb.gz] PASSED [ 1%] 715s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1lpbA.pdb.gz] PASSED [ 1%] 715s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1mr1D.pdb.gz] PASSED [ 1%] 715s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1or4A.pdb.gz] PASSED [ 1%] 715s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1pdoA.pdb.gz] PASSED [ 1%] 716s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1v7mV.pdb.gz] PASSED [ 1%] 716s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1y1lA.pdb.gz] FAILED [ 1%] 716s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2a2lA.pdb.gz] FAILED [ 1%] 716s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cayA.pdb.gz] FAILED [ 1%] 716s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cviA.pdb.gz] FAILED [ 1%] 716s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2fvvA.pdb.gz] FAILED [ 1%] 716s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2gu3A.pdb.gz] FAILED [ 1%] 717s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2i39A.pdb.gz] FAILED [ 1%] 717s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2j49A.pdb.gz] FAILED [ 1%] 717s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2qdlA.pdb.gz] FAILED [ 1%] 717s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2va0A.pdb.gz] FAILED [ 1%] 717s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xcjA.pdb.gz] FAILED [ 1%] 717s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] FAILED [ 1%] 717s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xr6A.pdb.gz] FAILED [ 1%] 718s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3a4rA.pdb.gz] FAILED [ 1%] 718s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3aqgA.pdb.gz] FAILED [ 1%] 718s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3e8mA.pdb.gz] FAILED [ 1%] 718s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ejfA.pdb.gz] FAILED [ 1%] 718s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3fhkA.pdb.gz] FAILED [ 1%] 718s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gfsA.pdb.gz] FAILED [ 1%] 718s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gknA.pdb.gz] FAILED [ 1%] 718s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gwiA.pdb.gz] FAILED [ 1%] 719s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3hklA.pdb.gz] FAILED [ 1%] 719s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ieyB.pdb.gz] FAILED [ 1%] 719s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ii2A.pdb.gz] FAILED [ 1%] 719s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3k7pA.pdb.gz] FAILED [ 1%] 719s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3l4rA.pdb.gz] FAILED [ 1%] 719s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3lqcA.pdb.gz] FAILED [ 1%] 719s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nbkA.pdb.gz] FAILED [ 1%] 720s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nngA.pdb.gz] FAILED [ 1%] 720s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ny7A.pdb.gz] FAILED [ 1%] 720s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nzmA.pdb.gz] FAILED [ 1%] 720s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3on9A.pdb.gz] FAILED [ 1%] 720s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3pivA.pdb.gz] FAILED [ 1%] 720s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3q4oA.pdb.gz] FAILED [ 1%] 720s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3so6A.pdb.gz] FAILED [ 1%] 720s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3t5gB.pdb.gz] FAILED [ 1%] 720s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3vjzA.pdb.gz] FAILED [ 1%] 721s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4dkcA.pdb.gz] FAILED [ 1%] 721s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4gcnA.pdb.gz] FAILED [ 1%] 721s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory[client_DSSP0] FAILED [ 1%] 722s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_atomgroup[client_DSSP0] FAILED [ 1%] 722s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_hydrogens[client_DSSP0] FAILED [ 1%] 722s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_without_hydrogen_fails[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 1%] 722s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_uneven_number_of_atoms_fails[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1mr1D_failing.pdb.gz] PASSED [ 1%] 722s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_exception_raises_with_atom_index[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/wrong_hydrogens.pdb.gz] PASSED [ 1%] 722s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1ahsA.pdb.gz] PASSED [ 1%] 722s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1bvyF.pdb.gz] PASSED [ 2%] 722s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1dx5I.pdb.gz] PASSED [ 2%] 722s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1eteA.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1h4aX.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1i8nA.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1lpbA.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1mr1D.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1or4A.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1pdoA.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1v7mV.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1y1lA.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2a2lA.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cayA.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cviA.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2fvvA.pdb.gz] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2gu3A.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2i39A.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2j49A.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2qdlA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2va0A.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xcjA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xr6A.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3a4rA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3aqgA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3e8mA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ejfA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3fhkA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gfsA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gknA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gwiA.pdb.gz] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3hklA.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ieyB.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ii2A.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3k7pA.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3l4rA.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3lqcA.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nbkA.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nngA.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ny7A.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nzmA.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3on9A.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3pivA.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3q4oA.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3so6A.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3t5gB.pdb.gz] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3vjzA.pdb.gz] PASSED [ 2%] 726s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4dkcA.pdb.gz] PASSED [ 2%] 726s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4gcnA.pdb.gz] PASSED [ 2%] 727s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory[client_DSSP1] PASSED [ 2%] 728s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_atomgroup[client_DSSP1] PASSED [ 2%] 728s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_hydrogens[client_DSSP1] PASSED [ 2%] 728s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_without_hydrogen_fails[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 2%] 728s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_uneven_number_of_atoms_fails[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1mr1D_failing.pdb.gz] PASSED [ 2%] 728s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_exception_raises_with_atom_index[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/wrong_hydrogens.pdb.gz] PASSED [ 2%] 728s testsuite/MDAnalysisTests/analysis/test_encore.py::test_moved_to_mdakit_warning PASSED [ 2%] 728s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_triangular_matrix PASSED [ 2%] 728s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_parallel_calculation FAILED [ 2%] 729s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_rmsd_matrix_with_superimposition PASSED [ 2%] 729s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_rmsd_matrix_with_superimposition_custom_weights PASSED [ 2%] 729s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_rmsd_matrix_without_superimposition PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ensemble_superimposition PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ensemble_superimposition_to_reference_non_weighted PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_covariance_matrix PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_covariance_matrix_with_reference PASSED [ 2%] 735s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_to_self PASSED [ 2%] 739s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes PASSED [ 2%] 748s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_custom_weights PASSED [ 2%] 753s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_align PASSED [ 2%] 754s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_to_self PASSED [ 2%] 754s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces PASSED [ 2%] 755s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_to_self PASSED [ 2%] 755s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres PASSED [ 2%] 756s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_without_superimposition XPASS [ 2%] 757s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_convergence PASSED [ 2%] 757s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_convergence PASSED [ 2%] 759s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_error_estimation XPASS [ 2%] 761s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_error_estimation PASSED [ 2%] 765s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_error_estimation_ensemble_bootstrap PASSED [ 2%] 768s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_error_estimation PASSED [ 2%] 768s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_one_ensemble PASSED [ 2%] 769s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_ensembles PASSED [ 2%] 769s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_three_ensembles_two_identical PASSED [ 2%] 770s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_methods PASSED [ 2%] 770s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_AffinityPropagationNative_direct PASSED [ 2%] 770s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_AffinityPropagation_direct PASSED [ 2%] 770s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_KMeans_direct PASSED [ 2%] 771s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_DBSCAN_direct PASSED [ 2%] 771s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_different_methods PASSED [ 2%] 771s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_method_w_no_distance_matrix PASSED [ 2%] 772s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_methods_one_w_no_distance_matrix PASSED [ 2%] 772s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_sklearn_affinity_propagation PASSED [ 2%] 772s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_ClusterCollection_init PASSED [ 2%] 772s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_Cluster_init PASSED [ 2%] 772s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_ClusterCollection_get_ids PASSED [ 2%] 772s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_ClusterCollection_get_centroids PASSED [ 2%] 773s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_add_metadata PASSED [ 2%] 773s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_empty_cluster PASSED [ 2%] 773s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_centroid_not_in_elements PASSED [ 2%] 773s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_metadata_size_error PASSED [ 2%] 773s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_iteration PASSED [ 2%] 773s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_len PASSED [ 2%] 773s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_repr PASSED [ 2%] 773s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClusteringSklearn::test_one PASSED [ 2%] 773s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_one_ensemble PASSED [ 2%] 774s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_two_ensembles PASSED [ 2%] 775s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_three_ensembles_two_identical PASSED [ 2%] 775s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_specified_dimension PASSED [ 2%] 775s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_SPENative_direct PASSED [ 2%] 776s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_PCA_direct PASSED [ 2%] 776s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_different_method PASSED [ 2%] 777s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_two_methods PASSED [ 2%] 778s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_two_different_methods PASSED [ 2%] 778s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreConfDistMatrix::test_get_distance_matrix PASSED [ 2%] 778s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreImportWarnings::test_import_warnings PASSED [ 2%] 778s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm[client_GNMAnalysis0] FAILED [ 2%] 779s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm_run_step[client_GNMAnalysis0] FAILED [ 2%] 779s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis[client_GNMAnalysis0] FAILED [ 2%] 780s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis_weights_None[client_GNMAnalysis0] FAILED [ 2%] 781s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm[client_GNMAnalysis1] PASSED [ 2%] 782s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm_run_step[client_GNMAnalysis1] PASSED [ 2%] 785s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis[client_GNMAnalysis1] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis_weights_None[client_GNMAnalysis1] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_generate_kirchoff PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm_SVD_fail PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_plane_circle PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_ortho_circle PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_around_circle PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_around_circle_rising PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_parallel_axes PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis0-screw_angles0] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis1-screw_angles1] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis2-screw_angles2] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis3-screw_angles3] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis4-screw_angles4] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis5-screw_angles5] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis6-screw_angles6] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis7-screw_angles7] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis8-screw_angles8] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis9-screw_angles9] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis10-screw_angles10] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis11-screw_angles11] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis12-screw_angles12] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis13-screw_angles13] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis14-screw_angles14] PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_square_oct PASSED [ 2%] 788s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_regression_summary PASSED [ 2%] 789s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_regression_values PASSED [ 2%] 789s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_multiple_selections PASSED [ 2%] 789s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_universe_from_origins PASSED [ 2%] 789s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_universe_from_origins_except PASSED [ 2%] 789s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_multiple_atoms_per_residues PASSED [ 2%] 789s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_residue_gaps_split PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_residue_gaps_no_split PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_len_groups_short PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis0-screw_angles0] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis1-screw_angles1] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis2-screw_angles2] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis3-screw_angles3] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis4-screw_angles4] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis5-screw_angles5] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis6-screw_angles6] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis7-screw_angles7] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis8-screw_angles8] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis9-screw_angles9] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis10-screw_angles10] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis11-screw_angles11] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis12-screw_angles12] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis13-screw_angles13] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis14-screw_angles14] PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_vector_of_best_fit PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_hole2.py::test_moved_to_mdakit_warning SKIPPED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_continuous PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_continuous_excl PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_intermittent PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_intermittent_timecut PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_intermittent_excl PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_solve_continuous PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_solve_intermittent PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_wronglength_DA PASSED [ 2%] 790s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_exclusions PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_bond_type_VE PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_solve_before_run_VE PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_unslicable_traj_VE PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_repr PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::test_find_donors PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::test_donors_nobonds PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_continuous PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_continuous_excl PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_intermittent PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_intermittent_timecut PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_intermittent_excl PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_solve_continuous PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_solve_intermittent PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_wronglength_DA PASSED [ 2%] 791s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_exclusions PASSED [ 2%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_bond_type_VE PASSED [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_solve_before_run_VE PASSED [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_unslicable_traj_VE PASSED [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_repr PASSED [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_deprecation_warning PASSED [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_find_donors PASSED [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_donors_nobonds PASSED [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_find_hydrogen_donors_deprecation_warning PASSED [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_moved_module_warning PASSED [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbond_analysis[client_HydrogenBondAnalysis0] ERROR [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_time[client_HydrogenBondAnalysis0] ERROR [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_type[client_HydrogenBondAnalysis0] ERROR [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_ids[client_HydrogenBondAnalysis0] ERROR [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis0] ERROR [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_type[client_HydrogenBondAnalysis0] ERROR [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_first_hbond[client_HydrogenBondAnalysis0] ERROR [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_time[client_HydrogenBondAnalysis0] ERROR [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis0] ERROR [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis0] ERROR [ 3%] 792s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_logging_step_not_1[client_HydrogenBondAnalysis0] FAILED [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_type[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_first_hbond[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_time[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_logging_step_not_1[client_HydrogenBondAnalysis0] FAILED [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_all[client_HydrogenBondAnalysis0] FAILED [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW[client_HydrogenBondAnalysis0] FAILED [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW_PP[client_HydrogenBondAnalysis0] FAILED [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbond_analysis[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_time[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_type[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_ids[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_no_hydrogens[client_HydrogenBondAnalysis0] FAILED [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_hbond_analysis[client_HydrogenBondAnalysis0] ERROR [ 3%] 793s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_time[client_HydrogenBondAnalysis0] ERROR [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_type[client_HydrogenBondAnalysis0] ERROR [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_hbond_analysis[client_HydrogenBondAnalysis0] FAILED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_time[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_ids[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_first_hbond[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_time[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_logging_step_not_1[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_first_hbond[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_time[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_logging_step_not_1[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_all[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW_PP[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_time[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_ids[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_no_hydrogens[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_time[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_no_bond_info_exception PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_no_bond_donor_sel PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_no_attr_hbonds PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_bond_info_exception PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_bond_donor_sel PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_attr_hbonds PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_hydrogen_bonds PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessDonors_NoTopology::test_guess_donors PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessHydrogens_NoTopology::test_guess_hydrogens PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessHydrogens_NoTopology::test_guess_hydrogens_empty_selection PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessHydrogens_NoTopology::test_guess_hydrogens_min_max_mass PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_empty_sel[donors_sel] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_empty_sel[hydrogens_sel] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_empty_sel[acceptors_sel] PASSED [ 3%] 794s testsuite/MDAnalysisTests/analysis/test_leaflet.py::test_optional_nx SKIPPED [ 3%] 795s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_leaflet_finder PASSED [ 3%] 795s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_string_vs_atomgroup_proper PASSED [ 3%] 795s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_optimize_cutoff PASSED [ 3%] 795s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_pbc_on_off PASSED [ 3%] 795s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_pbc_on_off_difference PASSED [ 3%] 795s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_sparse_on_off_none[True] PASSED [ 3%] 795s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_sparse_on_off_none[False] PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_sparse_on_off_none[None] PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_cutoff_update PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_cutoff_update_default PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_write_selection PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_component_index_is_not_none PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_invalid_grouping PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[atoms-expected_masses0-expected_charges0-expected_xmass0-expected_xcharge0] PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[residues-expected_masses1-expected_charges1-expected_xmass1-expected_xcharge1] PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[segments-expected_masses2-expected_charges2-expected_xmass2-expected_xcharge2] PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[fragments-expected_masses3-expected_charges3-expected_xmass3-expected_xcharge3] PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_updating_atomgroup PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_old_name_deprecations PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_parallel_analysis PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_msd.py::test_notidynamics PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_selection_works PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_ag_accepted PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_updating_ag_rejected PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[foo] PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[bar] PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[yx] PASSED [ 3%] 796s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[zyx] PASSED [ 3%] 797s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[xyz-3] PASSED [ 3%] 797s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[xy-2] PASSED [ 3%] 798s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[xz-2] PASSED [ 3%] 798s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[yz-2] PASSED [ 3%] 798s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[x-1] PASSED [ 3%] 798s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[y-1] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[z-1] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[xyz-3] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[xy-2] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[xz-2] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[yz-2] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[x-1] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[y-1] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[z-1] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_random_walk_u_simple PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_default SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_default_per_particle SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[xyz] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[xy] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[xz] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[yz] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[x] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[y] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[z] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[xyz] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[xy] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[xz] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[yz] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[x] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[y] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[z] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[xyz-3] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[xy-2] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[xz-2] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[yz-2] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[x-1] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[y-1] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[z-1] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[xyz-3] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[xy-2] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[xz-2] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[yz-2] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[x-1] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[y-1] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[z-1] SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_random_walk_u_fft SKIPPED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_empty_ag_error PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_shape PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_results_keys PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_invalid_residue_types PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_selection_length_mismatch PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_deprecation_warning PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_strand_verification PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[0] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[1] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[2] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[parsnips] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[time] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[-1] PASSED [ 3%] 799s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_minor_dist PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_major_dist PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_wc_pair[1-2-RNAA-RNAA-4.3874702] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_wc_pair[22-23-RNAA-RNAA-4.1716404] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_minor_pair[3-17-RNAA-RNAA-15.06506] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_minor_pair[20-5-RNAA-RNAA-3.219116] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_major_pair[2-12-RNAA-RNAA-26.884272] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_major_pair[5-9-RNAA-RNAA-13.578535] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_cp[RNAA-9-3.16497] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_cp[RNAA-21-22.07721] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_as[RNAA-1-359.5758] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_as[RNAA-11-171.71645] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors[RNAA-5-expected_value0] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors[RNAA-21-expected_value1] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_alpha[RNAA-6-279.15103] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_alpha[RNAA-18-298.09936] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_beta[RNAA-7-184.20501] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_beta[RNAA-15-169.70042] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_gamma[RNAA-7-52.72022] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_gamma[RNAA-15-54.59684] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_delta[RNAA-7-84.80554] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_delta[RNAA-15-82.00043] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_eps[RNAA-7-200.4099] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_eps[RNAA-15-210.96953] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_zeta[RNAA-7-297.84736] PASSED [ 3%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_zeta[RNAA-15-330.24898] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-1-178.37435] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-2-202.03418] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-7-200.91674] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-15-209.32109] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-20-103.07024] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-5-156.62223] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-7-77.94538] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-15-130.18539] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_pseudo_dihe_baseflip[16-2-3-RNAA-RNAA-RNAA-314.69804] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_pseudo_dihe_baseflip[8-9-10-RNAA-RNAA-RNAA-34.50106] PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cov PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cum_var PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pcs PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pcs_n_components PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_different_steps PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_different_atoms PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_rerun PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_not_run PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_no_frames PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_can_run_frames PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_mismatch PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_universe PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_no_pca_run PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_none_anchor PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_more_anchor PASSED [ 4%] 800s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_less_anchor PASSED [ 4%] 802s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_invalid_anchor PASSED [ 4%] 802s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_compare_projections PASSED [ 4%] 802s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_reconstruct_whole PASSED [ 4%] 802s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[0-0] PASSED [ 4%] 802s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[0-n21] PASSED [ 4%] 802s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[n12-n22] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[0-1] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[1-0] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_extrapolate_translation PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cosine_content PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_mean_shape PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_calculate_mean PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_given_mean PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_wrong_num_given_mean PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_alignment PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_covariance_norm PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_rmsip_self PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_rmsip_ortho PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pytest_too_many_components PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_asymmetric_rmsip PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_cumulative_overlap_self PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cumulative_overlap_ortho PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_other[rmsip] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_other[cumulative_overlap] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_self[rmsip] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_self[cumulative_overlap] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_wrong_class[rmsip] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_wrong_class[cumulative_overlap] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_attr_warning[p_components] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_attr_warning[variance] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_attr_warning[cumulated_variance] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_class_is_parallelizable[PCA-False] PASSED [ 4%] 803s testsuite/MDAnalysisTests/analysis/test_pca.py::test_supported_backends[PCA-backends0] PASSED [ 4%] 804s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_ag_ValueError PASSED [ 4%] 804s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_run PASSED [ 4%] 804s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_lb PASSED [ 4%] 804s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_fit PASSED [ 4%] 805s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_raise_NoDataError PASSED [ 4%] 805s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_plot_ax_return PASSED [ 4%] 805s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_plot_with_ax PASSED [ 4%] 806s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_current_axes PASSED [ 4%] 806s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test[lb] PASSED [ 4%] 806s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test[lp] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test[fit] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestFitExponential::test_fit_simple PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestFitExponential::test_fit_noisy PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_missing_bonds PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_sortbb PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_not_fragment PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_branches PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_circular PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_psa.py::test_moved_to_mdakit_warning SKIPPED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_nbins PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_range PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_count_sum PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_count PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_double_run PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_exclusion PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues[residue-8] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues[segment-0] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues[chain-8] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues_fails PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[rdf] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[bins] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[edges] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[count] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm[density-1.956823] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm[rdf-244602.88385] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm[none-4] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm_values[Density-density] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm_values[None-none] PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_unknown_norm PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_nbins PASSED [ 4%] 807s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_range PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_count_size PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_count PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_double_run PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_cdf PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_density[None-26551.55088100731] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_density[False-26551.55088100731] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_density[True-0.021915460340071267] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_overwrite_norm PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm[density-0.021915460340071267] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm[rdf-26551.55088100731] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm[none-0.6] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm_values[Density-density] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm_values[None-none] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_unknown_norm PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[rdf] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[bins] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[edges] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[count] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[cdf] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_get PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_no_attr PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_set_attr PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_set_key PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[_MutableMapping__marker] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__abstractmethods__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__class__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__class_getitem__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__contains__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__copy__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__delattr__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__delitem__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__dict__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__dir__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__doc__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__eq__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__firstlineno__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__format__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ge__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__getattribute__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__getitem__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__getstate__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__gt__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__hash__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__init__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__init_subclass__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ior__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__iter__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__le__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__len__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__lt__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__module__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ne__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__new__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__or__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__reduce__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__reduce_ex__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__repr__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__reversed__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ror__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__setattr__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__setitem__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__sizeof__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__slots__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__static_attributes__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__str__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__subclasshook__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__weakref__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[_abc_impl] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[clear] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[copy] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[fromkeys] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[get] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[items] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[keys] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[pop] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[popitem] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[setdefault] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[update] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[values] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[data] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[_MutableMapping__marker] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__abstractmethods__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__class__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__class_getitem__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__contains__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__copy__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__delattr__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__delitem__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__dict__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__dir__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__doc__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__eq__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__firstlineno__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__format__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ge__] PASSED [ 4%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__getattribute__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__getitem__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__getstate__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__gt__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__hash__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__init__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__init_subclass__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ior__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__iter__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__le__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__len__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__lt__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__module__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ne__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__new__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__or__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__reduce__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__reduce_ex__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__repr__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__reversed__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ror__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__setattr__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__setitem__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__sizeof__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__slots__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__static_attributes__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__str__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__subclasshook__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__weakref__] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[_abc_impl] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[clear] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[copy] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[fromkeys] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[get] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[items] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[keys] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[pop] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[popitem] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[setdefault] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[update] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[values] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[data] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[0123] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[0j] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[1.1] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[{}] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[a b] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_setattr_modify_item PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_setitem_modify_item PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_delattr PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_missing_delattr PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_pop PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_update PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_update_data_fail PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_pickle PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args0-kwargs0-1] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args1-kwargs1-1] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args2-kwargs2-2] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args3-kwargs3-1] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_different_instances PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[1] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[2] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[5] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[14] PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_p_frames PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_no_center PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_center PASSED [ 5%] 808s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_list PASSED [ 5%] 809s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_superposition[float32] PASSED [ 5%] 809s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_superposition[float64] PASSED [ 5%] 809s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_weights PASSED [ 5%] 809s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_weights_and_superposition_1 PASSED [ 5%] 809s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_weights_and_superposition_2 PASSED [ 5%] 809s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_unequal_shape PASSED [ 5%] 809s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_wrong_weights PASSED [ 5%] 809s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_with_superposition_smaller PASSED [ 5%] 809s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_with_superposition_equal PASSED [ 5%] 809s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd[client_RMSD0] FAILED [ 5%] 810s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_frames[client_RMSD0] FAILED [ 5%] 810s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_unicode_selection[client_RMSD0] FAILED [ 5%] 810s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_atomgroup_selections[client_RMSD0] FAILED [ 5%] 810s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_single_frame[client_RMSD0] FAILED [ 5%] 810s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_mass_weighted[client_RMSD0] FAILED [ 5%] 810s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_weighted[client_RMSD0] FAILED [ 5%] 811s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_weights_mass_is_mass_weighted[client_RMSD0] FAILED [ 5%] 811s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_weighted_list[client_RMSD0] FAILED [ 5%] 811s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_1D_array[client_RMSD0] FAILED [ 5%] 811s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_mass[client_RMSD0] FAILED [ 5%] 812s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_group_selections[client_RMSD0] FAILED [ 5%] 812s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_backbone_and_group_selection[client_RMSD0] FAILED [ 5%] 812s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_ref_mobile_mass_mismapped[client_RMSD0] FAILED [ 5%] 812s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_attr_warning[client_RMSD0] FAILED [ 5%] 812s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd[client_RMSD1] PASSED [ 5%] 812s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_frames[client_RMSD1] PASSED [ 5%] 812s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_unicode_selection[client_RMSD1] PASSED [ 5%] 813s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_atomgroup_selections[client_RMSD1] PASSED [ 5%] 813s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_single_frame[client_RMSD1] PASSED [ 5%] 813s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_mass_weighted[client_RMSD1] PASSED [ 5%] 813s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_weighted[client_RMSD1] PASSED [ 5%] 813s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_weights_mass_is_mass_weighted[client_RMSD1] PASSED [ 5%] 813s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_weighted_list[client_RMSD1] PASSED [ 5%] 813s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_1D_array[client_RMSD1] PASSED [ 5%] 813s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_mass[client_RMSD1] PASSED [ 5%] 813s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_group_selections[client_RMSD1] PASSED [ 5%] 814s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_backbone_and_group_selection[client_RMSD1] PASSED [ 5%] 814s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_ref_mobile_mass_mismapped[client_RMSD1] PASSED [ 5%] 814s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_attr_warning[client_RMSD1] PASSED [ 5%] 814s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_scalar_weights_raises_ValueError PASSED [ 5%] 814s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_string_weights_raises_ValueError PASSED [ 5%] 814s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_mismatched_weights_raises_ValueError PASSED [ 5%] 814s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_misuse_weights_for_groupselection_raises_TypeError PASSED [ 5%] 814s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_mismatched_weights_in_groupselection_raises_ValueError PASSED [ 5%] 814s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_list_of_weights_wrong_length PASSED [ 5%] 815s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_ref_length_unequal_len PASSED [ 5%] 815s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_mass_mismatches PASSED [ 5%] 815s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_group_selections_unequal_len PASSED [ 5%] 815s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf[client_RMSF0] PASSED [ 5%] 816s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf_single_frame[client_RMSF0] PASSED [ 5%] 817s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf_identical_frames[client_RMSF0] PASSED [ 5%] 817s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf_attr_warning[client_RMSF0] PASSED [ 5%] 817s testsuite/MDAnalysisTests/analysis/test_rms.py::test_class_is_parallelizable[RMSD-True] PASSED [ 5%] 817s testsuite/MDAnalysisTests/analysis/test_rms.py::test_class_is_parallelizable[RMSF-False] PASSED [ 5%] 817s testsuite/MDAnalysisTests/analysis/test_rms.py::test_supported_backends[RMSD-backends0] PASSED [ 5%] 817s testsuite/MDAnalysisTests/analysis/test_rms.py::test_supported_backends[RMSF-backends1] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_waterdynamics.py::test_moved_to_mdakit_warning SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_nodata PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_selection_type_error PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_distance_type_error PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_selection2_type_error PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_empty_selection PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_loop PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter_pbc[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter_pbc[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_accepter_donor[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_accepter_donor[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_accepter[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_accepter[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_accepter[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_accepter[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_donor[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_donor[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_donor[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_donor[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_empty PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_same_selection PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_2water_accepter[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_2water_accepter[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_3water_accepter[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_3water_accepter[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_4water_accepter[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_4water_accepter[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_22water_accepter[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_22water_accepter[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_timeseries_wba PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_timeseries_hba PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_12water_accepter[hydrogen] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_12water_accepter[heavy] PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_single_link PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_multiple_link PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_multiple_frame PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_filter PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_merge PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_order PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_time PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_time_weight PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_time_empty PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_generate_table_hba PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_generate_table_s1s2 PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_timesteps_by_type PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_duplicate_water PASSED [ 5%] 818s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_warn_results_deprecated PASSED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_get_auxreader_for_none PASSED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_get_auxreader_for_wrong_auxdata PASSED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_get_auxreader_for_wrong_format PASSED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_notimplemented_read_next_timestep PASSED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_notimplemented_memory_usage PASSED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::test_pyedr_not_present_raises PASSED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_raise_error_no_auxdata_provided SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_n_steps SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_dt SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_initial_time SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_first_step SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_next SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_rewind SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_move_to_step SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_last_step SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_next_past_last_step_raises_StopIteration SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_move_to_invalid_step_raises_IndexError SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_invalid_step_to_time_raises_ValueError SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_iter SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_iter_list SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_iter_slice SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_slice_start_after_stop_raises_IndexError SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_slice_out_of_range_raises_IndexError SKIPPED [ 5%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_slice_non_int_raises_TypeError SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_bad_represent_raises_ValueError SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_time_selector SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_time_selector_manual SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_data_selector SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_no_constant_dt SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_update_ts_without_auxname_raises_ValueError SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_represent_as_closest_with_cutoff SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_auxreader_for SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_auxiliary_read_ts_rewind SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_description SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_load_from_description SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_step_to_frame_out_of_bounds SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_step_to_frame_no_time_diff SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_go_to_step_fail SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_set_constant_dt[True] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_set_constant_dt[False] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_copy SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_time_non_constant_dt SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_iterate_through_trajectory SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_iterate_as_auxiliary_from_trajectory SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_step_to_frame_time_diff SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_lower_freq_timestep SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_higher_freq_timestep SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_offset_timestep SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_represent_as_average SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_represent_as_average_with_cutoff SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_all_terms_from_file SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_all_terms_from_reader SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_term_list_custom_names_from_file SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_term_list_custom_names_from_reader SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_raise_error_if_auxname_already_assigned SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_single_term_custom_name_from_file SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_single_term_custom_name_from_reader SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_terms_update_on_iter SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_invalid_data_selector SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_all_times SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_from_string SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_from_list SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_everything SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_invalid_selections[42] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_invalid_selections[Not a valid term] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_invalid_selections[get_data_input2] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_warning_when_space_in_aux_spec SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_warn_too_much_memory_usage SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_auxreader_picklable SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_units_are_converted_by_EDRReader SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_warning_when_unknown_unit SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_unit_conversion_is_optional SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_edr.py::test_single_frame_input_file SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGStep::test_select_time_none PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGStep::test_select_time_invalid_index PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGStep::test_select_data_none PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_raise_error_no_auxdata_provided PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_n_steps PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_dt PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_initial_time PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_first_step PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_next PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_rewind PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_move_to_step PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_last_step PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_next_past_last_step_raises_StopIteration PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_move_to_invalid_step_raises_IndexError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_invalid_step_to_time_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_iter PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_iter_list PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_iter_slice PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_slice_start_after_stop_raises_IndexError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_slice_out_of_range_raises_IndexError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_slice_non_int_raises_TypeError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_bad_represent_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_time_selector PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_time_non_constant_dt PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_time_selector_manual PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_data_selector PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_no_constant_dt PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_update_ts_without_auxname_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_read_lower_freq_timestep PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_represent_as_average PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_represent_as_average_with_cutoff PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_read_offset_timestep PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_represent_as_closest_with_cutoff PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_read_higher_freq_timestep PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_get_auxreader_for PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_iterate_through_trajectory PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_iterate_as_auxiliary_from_trajectory PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_auxiliary_read_ts_rewind PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_get_description PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_load_from_description PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_step_to_frame_out_of_bounds PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_step_to_frame_no_time_diff PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_step_to_frame_time_diff PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_go_to_step_fail PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_set_constant_dt[True] PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_set_constant_dt[False] PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_copy PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_changing_n_col_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_time_selector_out_of_range_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_data_selector_out_of_range_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_raise_error_no_auxdata_provided PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_n_steps PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_dt PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_initial_time PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_first_step PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_next PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_rewind PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_move_to_step PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_last_step PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_next_past_last_step_raises_StopIteration PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_move_to_invalid_step_raises_IndexError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_invalid_step_to_time_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_iter PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_iter_list PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_iter_slice PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_slice_start_after_stop_raises_IndexError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_slice_out_of_range_raises_IndexError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_slice_non_int_raises_TypeError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_bad_represent_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_time_selector PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_time_non_constant_dt PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_time_selector_manual PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_data_selector PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_no_constant_dt PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_update_ts_without_auxname_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_read_lower_freq_timestep PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_represent_as_average PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_represent_as_average_with_cutoff PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_read_offset_timestep PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_represent_as_closest_with_cutoff PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_read_higher_freq_timestep PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_iterate_through_trajectory PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_iterate_as_auxiliary_from_trajectory PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_auxiliary_read_ts_rewind PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_get_description PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_load_from_description PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_step_to_frame_out_of_bounds PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_step_to_frame_no_time_diff PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_step_to_frame_time_diff PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_go_to_step_fail PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_set_constant_dt[True] PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_set_constant_dt[False] PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_copy PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_changing_n_col_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_time_selector_out_of_range_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_data_selector_out_of_range_raises_ValueError PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_get_auxreader_for PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_reopen PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::test_xvg_bz2 PASSED [ 6%] 818s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::test_xvg_file_bz2 PASSED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_base.py::test_coordinate_converterbase_warning PASSED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_base.py::test_converters_converterbase_no_warning PASSED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRequiresRDKit::test_converter_requires_rdkit PASSED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_coordinates[mol2_mol-1] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_coordinates[smiles_mol-3] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_no_coordinates SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_compare_mol2reader SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_no_atoms_attr SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[[H]] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[C] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[O] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[[He]] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[PRO-14-1] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[ILE-38-1] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[ALA-20-2] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[GLY-21-3] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_monomer_info[resid 1-0] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_monomer_info[resname LYS and name NZ-1] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_monomer_info[resid 34 and altloc B-2] SKIPPED [ 6%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_identical_topology[mol2_mol] 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testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[P](-[O]-[H])(-[O])(-[O])-[O]-P([O-])([O-])(O)=O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[P](-[O])(-[O])(-[O])-[O]-P([O-])([O-])([O-])=O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[H]-[O]-[N]-[O]-ON=O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[N]-[C]-[O]-N#C[O-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[[C](-[H])(-[H])(-[H])-[O]-4--1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[[N]-[C]-[O]-2--1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[[N](-[H])(-[H])(-[H])-[H]-0-1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[C-[C](-[O])-[O]-3--1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[S](-[O]-[H])(-[O]-[H])(-[O])-[O]-S(=O)(=O)(O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[S](-[O]-[H])(-[O])(-[O])-[O]-S(=O)(=O)([O-])O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[S](-[O])(-[O])(-[O])-[O]-S(=O)(=O)([O-])[O-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C-[N](-[H])-[C](-[N](-[H])-[H])-[N](-[H])-[H]-CNC(N)=[N+](-[H])-[H]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[O]-[C](-[H])-[C](-[H])-[H]-C([O-])=C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C-[N](-[O])-[O]-C[N+](=O)[O-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C(-[N](-[O])-[O])-[N](-[O])-[O]-C([N+](=O)[O-])[N+](=O)[O-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C-[N](-[O])-[O].C-[N](-[O])-[O]-C[N+](=O)[O-].C[N+](=O)[O-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[C-](=O)-C-[C](=O)-C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[H]-[N-]-C-[H]-[N]-C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[O]-[C]1-[C](-[H])-[C](-[H])-[C](-[H])-[C](-[H])-[C](-[H])1-[O-]c1ccccc1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[O]-[C]1-[C](-[H])-[C](-[H])-[C](-[H])-[C]1-[O]-[O-]C1=CC=CC1=O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[H]-[C]-[C]-[C](-[H])-[C](-[H])-[H]-C#CC=C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[H]-[C]-[C]-[C]-[C]-[H]-C#CC#C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-42-GetIntProp] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value1-GetIntProp] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value2-GetIntProp] SKIPPED [ 7%] 818s 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testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1ccc(cc1)-c1ccccc1-c1ccccc1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1cc[nH]c1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1ccc(cc1)-c1ccc(-c2ccccc2)c(-c2ccccc2)c1-c1ccccc1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1ccc2c(c1)c1ccccc1c1ccccc1c1ccccc1c1ccccc21] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1csc(c1)-c1ccoc1-c1cc[nH]c1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C1=C2C(=NC=N1)N=CN2] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CN1C=NC(=C1SC2=NC=NC3=C2NC=N3)[N+](=O)[O-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1c[nH]c(c1)-c1ccc(s1)-c1ccoc1-c1c[nH]cc1-c1ccccc1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C=CC=CC=CC=CC=CC=C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NCCCCC([NH3+])C(=O)[O-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C=CC1=C(C)CCCC1(C)C)=CC=CC(C)=CC=[NH+]C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C#CC=C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C([C@H](CC1=CNC=N1)N)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C([C@H](CC1=CN=CN1)N)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C([C@H](CC1=C[NH1+]=CN1)[NH3+])[O-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CCOC(=O)c1cc2cc(C(=O)O)ccc2[nH]1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-][n+]1cccnc1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[n+]1ccccc1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[PH4+]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1nc[nH]n1] SKIPPED [ 7%] 818s 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818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[C@@H](Oc1cc(F)ccc1Nc1ncnc2cc(N=S3(=O)CCC3)cc(F)c12)C(=O)NCC#N] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-][n+]1onc2ccccc21] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1cc[n+](CC[n+]2ccc(C)cc2)cc1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-]c1ccccc1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-]C=CC=CCC=CC=[N+](C)C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C=[N+](-[O-])-C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C-[N-]-C(=O)C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[C@H](N)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NCC(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC[C@H](C)[C@H](N)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)C[C@H](N)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C(O)[C@@H]1CCCN1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)[C@H](N)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1ccccc1)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1c[nH]c2ccccc12)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1ccc(O)cc1)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CC(=O)O)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CCC(=O)O)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N=C(N)NCCC[C@H](N)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1c[nH]cn1)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NCCCC[C@H](N)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CO)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[C@@H](O)[C@H](N)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CS)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CSCC[C@H](N)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NC(=O)C[C@H](N)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NC(=O)CC[C@H](N)C(=O)O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Nc1ncnc2c1ncn2[C@H]1C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1cn([C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)[nH]c1=O] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=c1ccn([C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)[nH]1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Nc1ccn([C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)n1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Nc1nc2c(ncn2[C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)[nH]1] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)NS(C)(=O)=Nc1ccc(-c2ccc(-c3nc4[nH]c(O[C@@H]5CO[C@@H]6[C@H](O)CO[C@H]56)nc4cc3Cl)cc2)cc1 CHEMBL4111464] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[n+]1c2ccccc2c(C(=O)O)c2[nH]c3ccc(Br)cc3c21 CHEMBL511591] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[n+]1ccccc1-c1ccc(NC(=O)c2ccc(C(=O)Nc3ccc(-c4cccc[n+]4C)cc3)cc2)cc1 CHEMBL3230729] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1ccc(/C(O)=C(/C([S-])=NCc2ccccc2)[n+]2cccc(CO)c2)cc1[N+](=O)[O-] CHEMBL1596426] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)(O)c1cc2c(cc1C(C)(C)O)-c1ccccc1-2 CHEMBL1990966] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-]/N=C1/c2ccccc2-c2nc3ccc(C(F)(F)F)cc3nc21 CHEMBL4557878] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N#Cc1c[nH]c(C(=O)Nc2ccc(-c3cccc[n+]3[O-])cc2C2=CCCCC2)n1 CHEMBL1172116] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-[N+]#N] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-N=[N+]=[N-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-[O+]=C] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-[N+]#[C-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_warn_conjugated_max_iter SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Li+]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Na+]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[K+]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Rb+]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Ag+]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Cs+]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Mg+2]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Ca+2]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Cu+2]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Zn+2]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Sr+2]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Ba+2]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Al+3]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Fe+2]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Cl-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[O-2]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Na+].[Cl-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_reorder_atoms[O=C([C@H](CC1=C[NH1+]=CN1)[NH3+])[O-]] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_reorder_atoms[O=S(C)(C)=NC] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_pdb_names SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_bond_stereo_not_stereoany[F/C(Br)=C(Cl)/I] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_bond_stereo_not_stereoany[F\\C(Br)=C(Cl)\\I] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_bond_stereo_not_stereoany[F-C(Br)=C(Cl)-I] SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_atom_sorter SKIPPED [ 7%] 818s testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py::TestINPCRDReader::test_reader PASSED [ 7%] 818s testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py::TestINPCRDReader::test_universe_inpcrd PASSED [ 7%] 818s testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py::TestINPCRDReader::test_universe_restrt PASSED [ 7%] 818s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_regular_repr PASSED [ 7%] 818s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_truncated_repr PASSED [ 7%] 819s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_next_trajectory PASSED [ 7%] 819s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_n_atoms PASSED [ 7%] 819s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_n_frames PASSED [ 7%] 819s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_iteration PASSED [ 7%] 819s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_jump_lastframe_trajectory PASSED [ 7%] 820s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_slice_trajectory PASSED [ 7%] 820s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_full_slice PASSED [ 7%] 820s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_frame_numbering PASSED [ 7%] 820s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_next_after_frame_numbering PASSED [ 7%] 821s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_frame PASSED [ 7%] 821s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_time PASSED [ 7%] 822s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_write_dcd PASSED [ 7%] 823s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transform_iteration PASSED [ 7%] 824s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transform_slice PASSED [ 7%] 824s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transform_switch PASSED [ 7%] 825s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transfrom_rewind PASSED [ 7%] 825s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderCommonDt::test_time PASSED [ 7%] 826s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_all_format_tuples PASSED [ 7%] 826s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_all_format_lammps PASSED [ 7%] 828s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_format_tuples_and_format PASSED [ 7%] 828s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_one_format_tuple PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_all_formats PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info0-xtc] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info0-trr] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info1-xtc] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info1-trr] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info2-xtc] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info2-trr] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info3-xtc] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info3-trr] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info4-xtc] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info4-trr] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info5-xtc] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info5-trr] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info6-xtc] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info6-trr] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info7-xtc] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info7-trr] PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_start_frames PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_missing PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_warning PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_interleaving_error PASSED [ 7%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_easy_trigger_warning PASSED [ 8%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_single_frames PASSED [ 8%] 830s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_mixed_filetypes PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_unsupported_filetypes PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l0-ref0] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l1-ref1] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l2-ref2] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l3-ref3] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l4-ref4] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l0-ref0] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l1-ref1] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l2-ref2] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l3-ref3] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l4-ref4] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l5-ref5] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l6-ref6] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l7-ref7] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l8-ref8] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l9-ref9] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l10-ref10] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l11-ref11] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l12-ref12] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l13-ref13] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l14-ref14] PASSED [ 8%] 831s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_issue_4008 PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_issue_3349 PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader0] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader1] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader2] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader3] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader4] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader5] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader6] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader7] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader8] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader9] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader10] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader11] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader12] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader13] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader14] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader15] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader16] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader17] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader18] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader19] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader20] PASSED [ 8%] 832s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader21] PASSED [ 8%] 834s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader22] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader23] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader24] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader25] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader26] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader0] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader1] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader2] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader3] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader4] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader5] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader6] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader7] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader8] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader9] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader10] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader11] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader12] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader13] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader14] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader15] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader16] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader17] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader18] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader19] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader20] PASSED [ 8%] 835s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader21] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader22] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader23] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader24] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader25] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader26] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args0] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args1] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args2] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args3] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args4] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args5] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args6] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args7] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args8] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args9] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args10] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args11] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args12] PASSED [ 8%] 837s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args13] PASSED [ 8%] 838s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args14] PASSED [ 8%] 838s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args15] PASSED [ 8%] 838s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args16] PASSED [ 8%] 838s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args17] PASSED [ 8%] 838s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args18] PASSED [ 8%] 838s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args19] PASSED [ 8%] 838s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args20] PASSED [ 8%] 838s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args21] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args22] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args23] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args24] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args25] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args26] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader0] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader1] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader2] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader3] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader4] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader5] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader6] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader7] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader8] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader9] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader10] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader11] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader12] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader13] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader14] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader15] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader16] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader17] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader18] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader19] SKIPPED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader20] PASSED [ 8%] 840s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader21] PASSED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader22] PASSED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader23] SKIPPED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader24] PASSED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader25] SKIPPED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader26] SKIPPED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader0] SKIPPED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader1] SKIPPED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader2] PASSED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader3] SKIPPED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader4] SKIPPED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader5] PASSED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader6] SKIPPED [ 8%] 842s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader7] PASSED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader8] SKIPPED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader9] SKIPPED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader10] PASSED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader11] SKIPPED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader12] SKIPPED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader13] SKIPPED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader14] PASSED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader15] PASSED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader16] PASSED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader17] PASSED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader18] SKIPPED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader19] SKIPPED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader20] PASSED [ 8%] 843s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader21] PASSED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader22] PASSED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader23] SKIPPED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader24] PASSED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader25] SKIPPED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader26] SKIPPED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader0] SKIPPED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader1] SKIPPED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader2] PASSED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader3] SKIPPED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader4] SKIPPED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader5] PASSED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader6] SKIPPED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader7] PASSED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader8] SKIPPED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader9] SKIPPED [ 8%] 846s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader10] PASSED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader11] SKIPPED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader12] SKIPPED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader13] SKIPPED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader14] PASSED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader15] PASSED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader16] PASSED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader17] PASSED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader18] SKIPPED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader19] SKIPPED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader20] PASSED [ 8%] 847s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader21] SKIPPED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader22] PASSED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader23] SKIPPED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader24] SKIPPED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader25] SKIPPED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader26] SKIPPED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader0] PASSED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader1] PASSED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader2] PASSED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader3] PASSED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader4] PASSED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader5] PASSED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader6] PASSED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader7] PASSED [ 8%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader8] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader9] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader10] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader11] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader12] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader13] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader14] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader15] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader16] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader17] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader18] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader19] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader20] PASSED [ 9%] 850s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader21] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader22] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader23] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader24] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader25] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader26] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader0] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader1] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader2] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader3] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader4] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader5] PASSED [ 9%] 852s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader6] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader7] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader8] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader9] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader10] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader11] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader12] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader13] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader14] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader15] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader16] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader17] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader18] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader19] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader20] PASSED [ 9%] 853s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader21] PASSED [ 9%] 855s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader22] PASSED [ 9%] 855s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader23] PASSED [ 9%] 855s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader24] PASSED [ 9%] 855s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader25] PASSED [ 9%] 855s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader26] PASSED [ 9%] 855s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_copy_with_auxiliary_no_pyedr PASSED [ 9%] 855s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_copy_with_auxiliary_pyedr SKIPPED [ 9%] 855s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_atoms[test.crd] PASSED [ 9%] 855s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_atoms[test.crd.bz2] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_atoms[test.crd.gz] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_roundtrip PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_EXT PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_EXT_read PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[resnames] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[resids] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[names] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[tempfactors] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[resnames] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[resids] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[names] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[tempfactors] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_n_atoms PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_n_frames PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_first_frame PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_double_close PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_get_writer_1 PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_get_writer_2 PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_dt PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_ts_dt_matches_reader PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_total_time PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_first_dimensions PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_changing_dimensions PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_volume PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_add_same_auxname_raises_ValueError PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_remove_auxiliary PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_auxiliary PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_get_aux_attribute PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_as_aux_cutoff PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_reload_auxiliaries_from_description PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_stop_iter PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_iter PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_2iter PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_slice PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_switch_frame PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformation_rewind PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_copy PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_add_another_transformations_raises_ValueError PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_pickle_reader PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_frame_collect_all_same XFAIL [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[fac] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[fca] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[afc] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[acf] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[caf] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[cfa] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_values[slice0] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_values[slice1] SKIPPED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_values[slice2] SKIPPED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_asel_shape[index 1] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_asel_shape[index 2] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_empty_asel PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_empty_atomgroup PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_asel_warns_deprecation PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_atomgroup PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_atomgroup_asel_mutex PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_last_frame PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_go_over_last_frame PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_frame_jump PASSED [ 9%] 856s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_frame_jump_issue1942 PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_next_gives_second_frame PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_reopen PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_rename_aux PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_as_aux_highf PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_as_aux_lowf PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_rewinds[indexed] PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_rewinds[sliced] PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_rewinds[all] PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_pickle_next_ts_reader PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_pickle_last_ts_reader PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_empty_dcd PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_with_statement PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_set_time PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_istart[0] PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_istart[1] PASSED [ 9%] 857s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_istart[2] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_istart[37] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_istart[None] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_different_box PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_trajectory_atomgroup PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_trajectory_universe PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_selection PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_none PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_no_container PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_not_changing_ts PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_random_unitcell PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_empty_dimension_warning PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_rewind PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_next PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_jump_last_frame PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_slice[5-17-3] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_slice[20-5--1] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_array_like[list] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_array_like[array] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_list_indices[indices0] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_list_indices[indices1] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice0-98] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice1-98] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice2-98] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice3-98] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice4-98] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice5-2] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice6-10] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice7-8] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice8-1] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice9-0] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice10-1] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice11-1] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice12-2] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice13-1] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice14-1] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice15-2] PASSED [ 9%] 858s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice16-4] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice17-3] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice18-2] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[fac-shape0] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[fca-shape1] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[afc-shape2] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[acf-shape3] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[caf-shape4] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[cfa-shape5] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_atomindices[indices0] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_atomindices[indices1] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_atomindices[indices2] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_reader_set_dt PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_writer_dt[dcd-4] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_writer_dt[xtc-3] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_DCDWriter_default[istart-0] PASSED [ 9%] 859s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_DCDWriter_default[nsavc-1] PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_other_writer[dcd-5] PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_other_writer[xtc-2] PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_single_frame PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_no_natoms PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_writer_trajectory_no_natoms PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_read_unitcell_triclinic[RefCHARMMtriclinicDCD] PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_read_unitcell_triclinic[RefNAMDtriclinicDCD] PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_unitcell_triclinic[RefCHARMMtriclinicDCD] PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_unitcell_triclinic[RefNAMDtriclinicDCD] PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ncdf2dcd_unitcell PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ncdf2dcd_coords PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe0] PASSED [ 9%] 860s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe1] PASSED [ 9%] 861s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe2] PASSED [ 9%] 861s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe3] PASSED [ 9%] 861s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_pathlib PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_large_dcdfile SKIPPED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_read_unitcell PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_positions PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_velocities PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_forces PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_read PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_read_unitcell PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_positions PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_velocities PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_forces PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_positions PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_read_unitcell PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_velocities PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_forces PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_names PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_pos PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_vel PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_for PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_number PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_names PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_pos PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_number PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_vel PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_for PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_len PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_getting PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_slicing PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_slicing_2 PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_position PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_velocity PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_force PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_unitcell PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_len PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_getting PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_slicing PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_slicing_2 PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_position PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_velocity PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_force PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_unitcell PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_len PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_getting PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_slicing PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_slicing_2 PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_position PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_velocity PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_force PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_unitcell PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_len PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_getting PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_slicing PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_slicing_2 PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_position PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_unitcell PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_velocity PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_force PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_global_cell PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_velocities PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_number_of_coords PASSED [ 10%] 861s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_coords_atom_0 PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_n_frames PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_time PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_frame PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_frame_index_0 PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_frame_index_1_raises_IndexError PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_single_file PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_uses_FHIAIMSReader PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_dimensions PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_n_atoms PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_fhiaims_positions PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_n_frames PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_time PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_missing_periodicity PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_relative_positions_no_box PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_missing_velocity PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_velocity_wrong_position PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_wrong_input_line PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_good_input_with_velocity PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_mixed_units PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_different_box PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_trajectory_atomgroup PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_trajectory_universe PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_selection PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_none PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_no_container PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_not_changing_ts PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer_with_velocity PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer_no_atom_names PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer_with_n_atoms_none PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_n_frames PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_random_access PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_rewind PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_next PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_dt PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_step5distances PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_n_frames PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_random_access PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_rewind PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_next PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_dt PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_step5distances PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_n_frames PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_random_access PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_rewind PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_next PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_dt PASSED [ 10%] 862s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_step5distances PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_load_gro PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_coordinates PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_distances PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_selection PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_unitcell PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_coordinates PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_distances PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_unitcell PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_volume PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_n_atoms PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_n_frames PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_first_frame PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_double_close PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_get_writer_1 PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_get_writer_2 PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_dt PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_ts_dt_matches_reader PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_total_time PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_first_dimensions PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_changing_dimensions PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_volume PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_iter PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_add_same_auxname_raises_ValueError PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_remove_auxiliary PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_iter_auxiliary PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_get_aux_attribute PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_iter_as_aux_cutoff PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_reload_auxiliaries_from_description PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_stop_iter PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_iter PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_2iter PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_slice PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_switch_frame PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformation_rewind PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_copy PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_add_another_transformations_raises_ValueError PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_pickle_reader PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_frame_collect_all_same PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[fac] PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[fca] PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[afc] PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[acf] PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[caf] PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[cfa] PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_values[slice0] SKIPPED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_values[slice1] SKIPPED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_values[slice2] SKIPPED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_asel_shape[index 1] PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_asel_shape[index 2] PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_empty_asel PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_empty_atomgroup PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_asel_warns_deprecation PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_atomgroup PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_atomgroup_asel_mutex PASSED [ 10%] 863s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_time PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_full_slice PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_different_box PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_trajectory_atomgroup PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_trajectory_universe PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_selection PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_none PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_no_container PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_not_changing_ts PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_velocities PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_no_resnames PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_no_resids PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_writer_no_atom_names PASSED [ 10%] 864s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_check_coordinate_limits_min PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_check_coordinate_limits_max PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_check_coordinate_limits_max_noconversion PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_n_atoms PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_n_frames PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_first_frame PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_double_close PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_get_writer_1 PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_get_writer_2 PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_dt PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_ts_dt_matches_reader PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_total_time PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_first_dimensions PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_changing_dimensions PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_volume PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_iter PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_add_same_auxname_raises_ValueError PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_remove_auxiliary PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 10%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_iter_auxiliary PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_get_aux_attribute PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_iter_as_aux_cutoff PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_reload_auxiliaries_from_description PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_stop_iter PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_iter PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_2iter PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_slice PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_switch_frame PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformation_rewind PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_copy PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_add_another_transformations_raises_ValueError PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_pickle_reader PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_frame_collect_all_same PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[fac] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[fca] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[afc] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[acf] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[caf] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[cfa] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_values[slice0] SKIPPED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_values[slice1] SKIPPED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_values[slice2] SKIPPED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_asel_shape[index 1] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_asel_shape[index 2] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_asel_shape[index 1 to 3] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_empty_asel PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_empty_atomgroup PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_asel_warns_deprecation PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_atomgroup PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_atomgroup_asel_mutex PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_different_box PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_trajectory_atomgroup PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_trajectory_universe PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_selection PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_none PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_no_container PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_not_changing_ts PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_n_atoms PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_n_frames PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_first_frame PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_double_close PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_get_writer_1 PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_get_writer_2 PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_dt PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_ts_dt_matches_reader PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_total_time PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_first_dimensions PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_changing_dimensions PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_volume PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_iter PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_add_same_auxname_raises_ValueError PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_remove_auxiliary PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_iter_auxiliary PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_get_aux_attribute PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_iter_as_aux_cutoff PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_reload_auxiliaries_from_description PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_stop_iter PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_iter PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_2iter PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_slice PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_switch_frame PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformation_rewind PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_copy PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_add_another_transformations_raises_ValueError PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_pickle_reader PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_frame_collect_all_same PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[fac] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[fca] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[afc] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[acf] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[caf] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[cfa] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_values[slice0] SKIPPED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_values[slice1] SKIPPED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_values[slice2] SKIPPED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_asel_shape[index 1] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_asel_shape[index 2] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_asel_shape[index 1 to 3] PASSED [ 11%] 865s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_empty_asel PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_empty_atomgroup PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_asel_warns_deprecation PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_atomgroup PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_atomgroup_asel_mutex PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_different_box PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_trajectory_atomgroup PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_trajectory_universe PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_selection PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_none PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_no_container PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_not_changing_ts PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_n_atoms PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_n_frames PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_first_frame PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_double_close PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_get_writer_1 PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_get_writer_2 PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_dt PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_ts_dt_matches_reader PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_total_time PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_first_dimensions PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_changing_dimensions PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_volume PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_iter PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_add_same_auxname_raises_ValueError PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_remove_auxiliary PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_iter_auxiliary PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_get_aux_attribute PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_iter_as_aux_cutoff PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_reload_auxiliaries_from_description PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_stop_iter PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_iter PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_2iter PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_slice PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_switch_frame PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformation_rewind PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_copy PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_add_another_transformations_raises_ValueError PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_pickle_reader PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_frame_collect_all_same PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[fac] PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[fca] PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[afc] PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[acf] PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[caf] PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[cfa] PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_values[slice0] SKIPPED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_values[slice1] SKIPPED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_values[slice2] SKIPPED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_asel_shape[index 1] PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_asel_shape[index 2] PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_empty_asel PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_empty_atomgroup PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_asel_warns_deprecation PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_atomgroup PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_atomgroup_asel_mutex PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_different_box PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_trajectory_atomgroup PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_trajectory_universe PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_selection PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_none PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_no_container PASSED [ 11%] 866s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_not_changing_ts PASSED [ 11%] 868s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_different_box PASSED [ 11%] 875s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_trajectory_atomgroup PASSED [ 11%] 881s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_trajectory_universe PASSED [ 11%] 886s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_selection PASSED [ 11%] 886s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_none PASSED [ 11%] 886s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_no_container PASSED [ 11%] 890s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_not_changing_ts PASSED [ 11%] 895s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_writer_large PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_writer_large_residue_count PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_growriter_resid_truncation PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_growriter_resid_true PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_growriter_resid_false PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_writer_resid_false PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_writer_resid_true PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_multiframe_gro PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_huge_box_gro PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[1] PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[2] PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[4] PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[5] PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[6] PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[7] PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[8] PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_gro_empty_box_write_read PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gsd.py::test_no_gsd_u_raises SKIPPED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gsd.py::test_gsd_reader_raises SKIPPED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_positions PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_n_frames PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_dimensions PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_data_step PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_n_atoms PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_n_frames PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_first_frame PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_double_close PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_dt PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_ts_dt_matches_reader PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_total_time PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_first_dimensions PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_changing_dimensions PASSED [ 11%] 898s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_volume PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_add_same_auxname_raises_ValueError PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_remove_auxiliary PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_auxiliary PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_get_aux_attribute PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_as_aux_cutoff PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_reload_auxiliaries_from_description PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_stop_iter PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_iter PASSED [ 11%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_2iter PASSED [ 12%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_slice PASSED [ 12%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_switch_frame PASSED [ 12%] 899s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformation_rewind PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_copy PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_add_another_transformations_raises_ValueError PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_pickle_reader PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_frame_collect_all_same PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[fac] PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[fca] PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[afc] PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[acf] PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[caf] PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[cfa] PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_values[slice0] PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_values[slice1] SKIPPED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_values[slice2] SKIPPED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_asel_shape[index 1] PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_asel_shape[index 2] PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_asel_shape[index 1 to 3] PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_empty_asel PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_empty_atomgroup PASSED [ 12%] 900s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_asel_warns_deprecation PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_atomgroup PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_atomgroup_asel_mutex PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_last_frame PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_go_over_last_frame PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_frame_jump PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_frame_jump_issue1942 PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_next_gives_second_frame PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_reopen PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_rename_aux PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_as_aux_highf PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_as_aux_lowf PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_rewinds[indexed] PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_rewinds[sliced] PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_rewinds[all] PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_pickle_next_ts_reader PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_pickle_last_ts_reader PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_get_writer_1 PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_get_writer_2 PASSED [ 12%] 901s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_copying PASSED [ 12%] 902s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_different_box PASSED [ 12%] 902s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_selection PASSED [ 12%] 902s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_none PASSED [ 12%] 902s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_no_container PASSED [ 12%] 902s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_not_changing_ts PASSED [ 12%] 902s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_trajectory_atomgroup PASSED [ 12%] 902s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_trajectory_universe PASSED [ 12%] 902s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_n_frames PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_positions PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_velocities PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_forces PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_dimensions PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_data_step PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_rewind PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_next PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_jump_last_frame PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_slice[0-2-1] PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_slice[1-2-1] PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_array_like[list] PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_array_like[array] PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_list_indices PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_group[position-positions] PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_group[velocity-velocities] PASSED [ 12%] 903s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_group[force-forces] PASSED [ 12%] 904s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[position/value] PASSED [ 12%] 904s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[position/time] PASSED [ 12%] 904s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[velocity/value] PASSED [ 12%] 904s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[force/value] PASSED [ 12%] 904s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_length_unit_from_box PASSED [ 12%] 905s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_changing_n_atoms[position] PASSED [ 12%] 905s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_changing_n_atoms[velocity] PASSED [ 12%] 905s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_changing_n_atoms[force] PASSED [ 12%] 905s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_2D_box PASSED [ 12%] 905s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_box_vector PASSED [ 12%] 905s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_box PASSED [ 12%] 905s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_groups PASSED [ 12%] 906s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_convert_units PASSED [ 12%] 906s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_units_but_convert_units_true_error PASSED [ 12%] 906s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_open_filestream XFAIL [ 12%] 906s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_wrong_driver PASSED [ 12%] 906s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_open_with_driver PASSED [ 12%] 906s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms[velocity-force] PASSED [ 12%] 906s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms[position-force] PASSED [ 12%] 906s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms[position-velocity] PASSED [ 12%] 906s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms_error PASSED [ 12%] 907s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_n_atoms_errors[0-ValueError-H5MDWriter: no atoms in output trajectory] PASSED [ 12%] 907s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_n_atoms_errors[0.5-OSError-H5MDWriter: Timestep does not have] PASSED [ 12%] 907s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_chunk_error PASSED [ 12%] 907s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_dimensions[None] PASSED [ 12%] 908s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_dimensions[0] PASSED [ 12%] 908s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_step_not_monotonic PASSED [ 12%] 908s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_step_from_frame PASSED [ 12%] 908s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_has_property PASSED [ 12%] 909s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-False-False] PASSED [ 12%] 909s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-True-False] PASSED [ 12%] 910s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-False-True] PASSED [ 12%] 910s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-True-True] PASSED [ 12%] 910s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[False-True-True] PASSED [ 12%] 911s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[False-False-True] PASSED [ 12%] 911s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[False-False-False] PASSED [ 12%] 911s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_AtomGroup_with PASSED [ 12%] 911s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_ag_write[None-1] PASSED [ 12%] 912s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_ag_write[all-3] PASSED [ 12%] 913s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[fs-Angstrom-Angstrom/ps-kJ/(mol*Angstrom)] PASSED [ 12%] 913s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[s-pm-m/s-Newton] PASSED [ 12%] 913s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[ps-fm-Angstrom/fs-kcal/(mol*Angstrom)] PASSED [ 12%] 914s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[AKMA-nm-Angstrom/AKMA-kcal/(mol*Angstrom)] PASSED [ 12%] 914s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[imaginary time-None-None-None] PASSED [ 12%] 914s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[None-None-c-None] PASSED [ 12%] 914s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[None-None-None-HUGE FORCE] PASSED [ 12%] 914s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[None-lightyear-None-None] PASSED [ 12%] 914s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_units_w_convert_true PASSED [ 12%] 915s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_units_w_convert_false PASSED [ 12%] 915s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_convert_units[True] PASSED [ 12%] 915s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_convert_units[False] PASSED [ 12%] 916s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks[chunks0] PASSED [ 12%] 916s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks[chunks1] PASSED [ 12%] 917s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks[chunks2] PASSED [ 12%] 918s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks_with_nframes PASSED [ 12%] 918s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_contiguous1 PASSED [ 12%] 918s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_contiguous2 PASSED [ 12%] 919s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_compression[gzip-1] PASSED [ 12%] 919s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_compression[gzip-9] PASSED [ 12%] 920s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_compression[lzf-None] PASSED [ 12%] 920s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_drivers[core] PASSED [ 12%] 920s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_drivers[stdio] PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_parallel_disabled PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_timestep_not_modified_by_writer PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5PYNotInstalled::test_reader_no_h5py PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5PYNotInstalled::test_writer_no_h5py PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithObservables::test_read_h5md_issue4598 PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithObservables::test_read_h5md_malformed PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datareader_ValueError PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_n_atoms PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_coords PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_velos PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_dimensions PASSED [ 12%] 921s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_singleframe PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_seek PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_seek_2 PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_iter PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_n_atoms PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_coords PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_velos PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_dimensions PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_singleframe PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_seek PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_seek_2 PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_iter PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_unwrap_vel_force PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_unwrap_image_wrap PASSED [ 12%] 922s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_unwrap_no_image PASSED [ 12%] 925s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 12%] 925s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 12%] 925s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-bonds] PASSED [ 12%] 925s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-angles] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-dihedrals] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-impropers] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-masses] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-charges] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-velocities] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-positions] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-masses] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-charges] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-velocities] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-positions] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-bonds] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-angles] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-dihedrals] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-impropers] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-masses] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-charges] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-velocities] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-positions] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-masses] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-charges] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-velocities] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-positions] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-bonds] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-angles] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-dihedrals] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-impropers] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-masses] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-charges] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-velocities] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-positions] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 12%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-masses] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-charges] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-velocities] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-positions] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-bonds] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-angles] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-dihedrals] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-impropers] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-masses] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-charges] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-velocities] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-positions] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-masses] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-charges] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-velocities] PASSED [ 13%] 926s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-positions] PASSED [ 13%] 929s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag0] PASSED [ 13%] 929s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag1] PASSED [ 13%] 929s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag2] PASSED [ 13%] 929s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag3] PASSED [ 13%] 931s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag4] PASSED [ 13%] 931s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datawriter_universe[out.data] PASSED [ 13%] 931s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datawriter_universe[out.data.bz2] PASSED [ 13%] 931s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datawriter_universe[out.data.gz] PASSED [ 13%] 931s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[masses] PASSED [ 13%] 932s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[charges] PASSED [ 13%] 933s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[velocities] PASSED [ 13%] 933s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[positions] PASSED [ 13%] 933s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_n_bonds PASSED [ 13%] 934s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_n_angles PASSED [ 13%] 934s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_Reader_is_LAMMPS PASSED [ 13%] 934s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_n_atoms PASSED [ 13%] 934s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_n_frames PASSED [ 13%] 934s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_dimensions PASSED [ 13%] 934s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_dt PASSED [ 13%] 934s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_Timestep_time PASSED [ 13%] 934s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_LAMMPSDCDReader_set_dt PASSED [ 13%] 934s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_wrong_time_unit PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_wrong_unit PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_Writer_is_LAMMPS PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_Writer PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_OtherWriter_is_LAMMPS PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_OtherWriter PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_Writer_is_LAMMPS PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_open PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_wrong_time_unit PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_wrong_unit PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_triclinicness PASSED [ 13%] 935s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestDataWriterErrors::test_write_no_masses PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestDataWriterErrors::test_write_no_types PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestDataWriterErrors::test_write_non_numerical_types PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_n_atoms[ascii] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_n_atoms[bz2] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_n_atoms[gzip] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_length[ascii] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_length[bz2] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_length[gzip] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_seeking[ascii] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_seeking[bz2] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_seeking[gzip] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_boxsize[ascii] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_boxsize[bz2] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_boxsize[gzip] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_atom_reordering[ascii] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_atom_reordering[bz2] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_atom_reordering[gzip] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_true-fields0] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_single-fields1] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_multiple-fields2] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_wrong_format_additional_colums[u_additional_columns_wrong_format] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_warning[u_additional_columns_not_present] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_absent_convention_fails[unscaled] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_absent_convention_fails[unwrapped] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_absent_convention_fails[scaled_unwrapped] PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_incorrect_convention_fails PASSED [ 13%] 936s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[auto-unscaled] PASSED [ 13%] 937s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[unscaled-unscaled] PASSED [ 13%] 938s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[scaled-scaled] PASSED [ 13%] 939s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[unwrapped-unwrapped] PASSED [ 13%] 940s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[scaled_unwrapped-scaled_unwrapped] PASSED [ 13%] 940s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_no_coordinate_info PASSED [ 13%] 945s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_unscaled_reference PASSED [ 13%] 949s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_scaled_reference PASSED [ 13%] 954s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_unwrapped_scaled_reference PASSED [ 13%] 960s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_scaled_unscaled_match PASSED [ 13%] 966s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_unwrapped_scaled_unwrapped_match PASSED [ 13%] 972s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_auto_is_unscaled_match PASSED [ 13%] 972s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsTriclinic::test_box PASSED [ 13%] 972s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_n_atoms PASSED [ 13%] 972s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_n_frames PASSED [ 13%] 972s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_first_frame PASSED [ 13%] 972s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_double_close PASSED [ 13%] 973s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_dt PASSED [ 13%] 973s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_ts_dt_matches_reader PASSED [ 13%] 973s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_total_time PASSED [ 13%] 973s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_first_dimensions PASSED [ 13%] 973s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_changing_dimensions PASSED [ 13%] 973s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_volume PASSED [ 13%] 973s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter PASSED [ 13%] 973s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_add_same_auxname_raises_ValueError PASSED [ 13%] 974s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_remove_auxiliary PASSED [ 13%] 974s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 13%] 974s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_auxiliary PASSED [ 13%] 974s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_get_aux_attribute PASSED [ 13%] 974s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_as_aux_cutoff PASSED [ 13%] 974s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_reload_auxiliaries_from_description PASSED [ 13%] 974s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_stop_iter PASSED [ 13%] 975s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_iter PASSED [ 13%] 975s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_2iter PASSED [ 13%] 976s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_slice PASSED [ 13%] 976s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_switch_frame PASSED [ 13%] 976s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformation_rewind PASSED [ 13%] 977s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_copy PASSED [ 13%] 977s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_add_another_transformations_raises_ValueError PASSED [ 13%] 977s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_pickle_reader PASSED [ 13%] 978s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_frame_collect_all_same XFAIL [ 13%] 978s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[fac] PASSED [ 13%] 978s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[fca] PASSED [ 13%] 978s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[afc] PASSED [ 13%] 978s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[acf] PASSED [ 13%] 978s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[caf] PASSED [ 13%] 978s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[cfa] PASSED [ 13%] 978s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_values[slice0] XFAIL [ 13%] 979s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_values[slice1] XFAIL [ 13%] 979s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_values[slice2] XFAIL [ 13%] 979s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_asel_shape[index 1] PASSED [ 13%] 979s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_asel_shape[index 2] PASSED [ 13%] 979s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 13%] 979s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_empty_asel PASSED [ 13%] 979s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_empty_atomgroup PASSED [ 13%] 979s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_last_frame PASSED [ 13%] 980s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_go_over_last_frame PASSED [ 13%] 980s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_frame_jump PASSED [ 13%] 980s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_frame_jump_issue1942 PASSED [ 13%] 980s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_next_gives_second_frame PASSED [ 13%] 980s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_reopen PASSED [ 13%] 980s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_rename_aux PASSED [ 13%] 980s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_as_aux_highf PASSED [ 13%] 981s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_as_aux_lowf PASSED [ 13%] 981s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_rewinds[indexed] PASSED [ 13%] 981s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_rewinds[sliced] PASSED [ 13%] 981s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_rewinds[all] PASSED [ 13%] 981s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_pickle_next_ts_reader PASSED [ 13%] 981s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_pickle_last_ts_reader PASSED [ 13%] 981s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_filename_transefer_to_memory PASSED [ 13%] 982s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_filename_array PASSED [ 13%] 982s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_default_memory_layout PASSED [ 13%] 982s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iteration PASSED [ 13%] 982s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_afc PASSED [ 13%] 982s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_fac PASSED [ 13%] 982s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_cfa PASSED [ 13%] 982s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_acf PASSED [ 13%] 982s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_fca PASSED [ 13%] 983s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_caf PASSED [ 13%] 983s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_skip1 PASSED [ 13%] 983s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_skip10 PASSED [ 13%] 983s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_view PASSED [ 13%] 983s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_subarray_view PASSED [ 13%] 983s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_view_from_universe_atoms PASSED [ 13%] 983s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_view_from_select_all PASSED [ 13%] 983s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_noview PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_repr PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_get_writer_1 PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_get_writer_2 PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_float32 PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_position_assignation PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_warns_deprecation PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_asel_warns_deprecation PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_atomgroup PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_atomgroup_asel_mutex PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[2d-2d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[2d-3d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[3d-2d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[3d-3d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[2d-2d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[2d-3d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[3d-2d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[3d-3d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-2d-2d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-2d-3d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-3d-2d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-3d-3d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-2d-2d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-2d-3d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-3d-2d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-3d-3d] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[2d-velocities] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[2d-forces] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[3d-velocities] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[3d-forces] PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_single_box PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_varying_box PASSED [ 13%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_wrong_length PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_wrong_shape PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[positions] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[velocities] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[forces] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[dimensions] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[positions] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[velocities] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[forces] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[dimensions] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_non_numpy_arr[velocities] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_non_numpy_arr[forces] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_non_numpy_arr[dimensions] PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_read_frame_size PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_read_positions PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_velocities PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_forces PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_len PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_read_frame_size PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_read_positions PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_velocities PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_forces PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_len PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::test_dimensionless PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::test_deprecation PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_read PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_read_statusbit PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_write PASSED [ 14%] 984s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_write_selection PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_write_in_loop PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_broken_molecule PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_comments_header PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_no_bonds PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_jump_lastframe_traj PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_jump_traj PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_n_frames PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_next_traj PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_reverse_traj PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_rewind_traj PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_slice_traj PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMOL2NoSubstructure::test_load PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMOL2NoSubstructure::test_universe PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMOL2NoSubstructure::test_write_nostructure PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::test_mol2_write_NIE PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::test_mol2_multi_write PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_mol2.py::test_mol2_universe_write PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_coordinates PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_distances PASSED [ 14%] 985s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_dt PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_frame PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_frame_index_0 PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_frame_index_1_raises_IndexError PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_full_slice PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_get_writer_from_reader PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_last_slice PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_load_file PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_n_atoms PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_n_frames PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_numres PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_parse_n_atoms PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_pickle_singleframe_reader PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_time PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_different_box PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_trajectory_atomgroup PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_trajectory_universe PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_selection PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_none PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_no_container PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_not_changing_ts PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_load_prm PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_n_atoms PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_n_frames PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_periodic PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_amber_proteinselection PASSED [ 14%] 986s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_sum_centres_of_geometry PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_initial_frame_is_0 PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_starts_with_first_frame PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_rewind PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_full_slice PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_random_access PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_slice_iteration PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_metadata PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_dt PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_get_writer PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_get_writer_custom_n_atoms PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_wrong_natoms PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_read_on_closed PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_mmap_kwarg PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_load_prm PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_n_atoms PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_n_frames PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_periodic PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_amber_proteinselection PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_sum_centres_of_geometry PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_initial_frame_is_0 PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_starts_with_first_frame PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_rewind PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_full_slice PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_random_access PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_slice_iteration PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_metadata PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_dt PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_get_writer PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_get_writer_custom_n_atoms PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_wrong_natoms PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_read_on_closed PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_mmap_kwarg PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_load_prm PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_n_atoms PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_n_frames PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_periodic PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_amber_proteinselection PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_sum_centres_of_geometry PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_initial_frame_is_0 PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_starts_with_first_frame PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_rewind PASSED [ 14%] 987s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_full_slice PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_random_access PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_slice_iteration PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_metadata PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_dt PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_get_writer PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_get_writer_custom_n_atoms PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_wrong_natoms PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_read_on_closed PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_mmap_kwarg PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_load_prm PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_n_atoms PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_n_frames PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_periodic PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_amber_proteinselection PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_sum_centres_of_geometry PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_initial_frame_is_0 PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_starts_with_first_frame PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_rewind PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_full_slice PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_random_access PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_slice_iteration PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_metadata PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_dt PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_get_writer PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_get_writer_custom_n_atoms PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_wrong_natoms PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_read_on_closed PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_mmap_kwarg PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_load_prm PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_n_atoms PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_n_frames PASSED [ 14%] 988s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_periodic PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_amber_proteinselection PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_sum_centres_of_geometry PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_initial_frame_is_0 PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_starts_with_first_frame PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_rewind PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_full_slice PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_random_access PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_slice_iteration PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_metadata PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_dt PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_get_writer PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_get_writer_custom_n_atoms PASSED [ 14%] 989s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_wrong_natoms PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_read_on_closed PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_mmap_kwarg PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_positions_1 PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_positions_2 PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_forces_1 PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_forces_2 PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_time_1 PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_time_2 PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_dt PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_box PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_positions[0-0] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_positions[8-1] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_forces[0-0] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_forces[8-1] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_velocities[0-0] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_velocities[8-1] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_time[0-1.0] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_time[8-9.0] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_nframes PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_dt PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_box[0-0] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_box[8-1] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader4::test_chain_times PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader4::test_dt PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader4::test_warn_user_no_time_information PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_coordinates PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_velocities PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_forces PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_box[mutation0-expected0] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_box[mutation1-expected1] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_not_float PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_type_errors[mutation0] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_type_errors[mutation1] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_type_errors[mutation2] PASSED [ 14%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation0] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation1] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation2] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation3] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation4] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation0] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation1] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation2] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation3] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation4] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation5] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation6] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_verify_units_errors[yard-foot] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_verify_units_errors[second-minute] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_ioerror PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_conventionversion_warn PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_program_warn[mutation0] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_program_warn[mutation1] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_no_dt_warning PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_write_trajectory_netCDF4 PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_write_trajectory_netcdf PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_OtherWriter[nc] PASSED [ 15%] 990s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_OtherWriter[ncdf] PASSED [ 15%] 991s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_TRR2NCDF PASSED [ 15%] 991s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_write_AtomGroup PASSED [ 15%] 991s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_write_trajectory_netCDF4 PASSED [ 15%] 992s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_write_trajectory_netcdf PASSED [ 15%] 992s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_OtherWriter[nc] PASSED [ 15%] 992s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_OtherWriter[ncdf] PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_TRR2NCDF PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_write_AtomGroup PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-False-False] PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-True-False] PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-False-True] PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-True-True] PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_factors_default PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_bad_scale_factor PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_write[-2.0--2.0--2.0--2.0--2.0--2.0] PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_write[1.0-1.0-1.0-1.0-1.0-1.0] PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_write[2.0-4.0-8.0-16.0-32.0-64.0] PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_factors_default PASSED [ 15%] 993s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_bad_scale_factor PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_write[-2.0--2.0--2.0--2.0--2.0--2.0] PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_write[1.0-1.0-1.0-1.0-1.0-1.0] PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_write[2.0-4.0-8.0-16.0-32.0-64.0] PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_ncdf4_not_present PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[coordinates-angstrom] PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[time-picosecond] PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[cell_lengths-angstrom] PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[cell_angles-degree] PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[velocities-angstrom/picosecond] PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[forces-kilocalorie/mole/angstrom] PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterErrorsWarnings::test_zero_atoms_VE PASSED [ 15%] 994s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterErrorsWarnings::test_wrong_n_atoms PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_null.py::test_NullWriter PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_ENT PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_coordinates PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_dimensions PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_distances PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_dt PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_frame PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_frame_index_0 PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_frame_index_1_raises_IndexError PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_full_slice PASSED [ 15%] 995s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_last_slice PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_load_file PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_n_atoms PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_n_frames PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_numres PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_pickle_singleframe_reader PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_time PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_uses_PDBReader PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_HEADER PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_TITLE PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_COMPND PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_REMARK PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_coordinates PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_distances PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_dt PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_frame PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_frame_index_0 PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_frame_index_1_raises_IndexError PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_full_slice PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_last_slice PASSED [ 15%] 996s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_load_file PASSED [ 15%] 997s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_long_resSeq PASSED [ 15%] 997s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_n_atoms PASSED [ 15%] 997s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_n_frames PASSED [ 15%] 997s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_numres PASSED [ 15%] 997s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_pickle_singleframe_reader PASSED [ 15%] 997s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_time PASSED [ 15%] 998s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer PASSED [ 15%] 998s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_resnames PASSED [ 15%] 998s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_resids PASSED [ 15%] 998s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_atom_names PASSED [ 15%] 998s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_altlocs PASSED [ 15%] 998s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_icodes PASSED [ 15%] 998s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_segids PASSED [ 15%] 998s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_occupancies PASSED [ 15%] 998s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_tempfactors PASSED [ 15%] 998s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_single_frame_Writer PASSED [ 15%] 999s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_single_frame_AtomGroup PASSED [ 15%] 999s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_nodims[universe_and_expected_dims0] PASSED [ 15%] 999s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_nodims[universe_and_expected_dims1] PASSED [ 15%] 1000s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_coordinate_limits_min PASSED [ 15%] 1000s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_coordinate_limits_max PASSED [ 15%] 1000s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_HEADER_TITLE_multiframe PASSED [ 15%] 1001s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_MODEL_multiframe[0-12] PASSED [ 15%] 1001s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_MODEL_multiframe[9997-12] PASSED [ 15%] 1003s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_chainid_validated[@] PASSED [ 15%] 1005s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_chainid_validated[] PASSED [ 15%] 1007s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_chainid_validated[AA] PASSED [ 15%] 1007s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_stringio_outofrange PASSED [ 15%] 1008s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_hetatm_written PASSED [ 15%] 1008s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_default_atom_record_type_written PASSED [ 15%] 1008s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_abnormal_record_type PASSED [ 15%] 1008s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_no_reindex PASSED [ 15%] 1009s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_no_reindex_bonds PASSED [ 15%] 1009s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_reindex PASSED [ 15%] 1009s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_no_reindex_missing_ids PASSED [ 15%] 1010s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_n_frames PASSED [ 15%] 1010s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_n_atoms_frame PASSED [ 15%] 1010s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_rewind PASSED [ 15%] 1010s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_iteration PASSED [ 15%] 1010s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_slice_iteration PASSED [ 15%] 1013s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_conect_bonds_conect PASSED [ 15%] 1013s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_conect_error PASSED [ 15%] 1013s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_numconnections PASSED [ 15%] 1017s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_conect_bonds_all PASSED [ 15%] 1017s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_bonds_partial PASSED [ 15%] 1017s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_bonds_with_100000_ag_index PASSED [ 15%] 1017s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_atomselection PASSED [ 15%] 1017s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_all_timesteps PASSED [ 15%] 1018s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_loop PASSED [ 15%] 1018s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_atoms PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_load_pdb PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_selection PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_n_atoms PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_n_frames PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_time PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_frame PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_dt PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_coordinates PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_distances PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_unitcell PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_volume PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_n_residues PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_first_residue PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBVaryingOccTmp::test_ts_data_keys PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBVaryingOccTmp::test_varying_attrs[occupancy-occupancies-vals0] PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBVaryingOccTmp::test_varying_attrs[tempfactor-tempfactors-vals1] PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_natoms PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_coords PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_dims PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_names PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_residues PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_resnames PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_reading_trajectory PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBXLSerial::test_load PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBXLSerial::test_serials PASSED [ 15%] 1019s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_coordinates PASSED [ 15%] 1020s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_distances PASSED [ 15%] 1020s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_dt PASSED [ 15%] 1020s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_frame PASSED [ 15%] 1020s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_frame_index_0 PASSED [ 15%] 1020s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_frame_index_1_raises_IndexError PASSED [ 15%] 1020s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_full_slice PASSED [ 15%] 1020s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_last_slice PASSED [ 15%] 1020s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_load_file PASSED [ 15%] 1020s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_n_atoms PASSED [ 15%] 1021s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_n_frames PASSED [ 15%] 1021s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_numres PASSED [ 15%] 1021s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_pickle_singleframe_reader PASSED [ 15%] 1021s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_time PASSED [ 15%] 1021s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_ENT PASSED [ 15%] 1021s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_coordinates PASSED [ 15%] 1021s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_dimensions PASSED [ 15%] 1021s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_distances PASSED [ 15%] 1022s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_dt PASSED [ 15%] 1022s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_frame PASSED [ 15%] 1022s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_frame_index_0 PASSED [ 15%] 1022s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_frame_index_1_raises_IndexError PASSED [ 15%] 1022s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_full_slice PASSED [ 15%] 1022s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_last_slice PASSED [ 15%] 1022s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_load_file PASSED [ 15%] 1022s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_n_atoms PASSED [ 15%] 1022s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_n_frames PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_numres PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_pickle_singleframe_reader PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_time PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_uses_PDBReader PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_occupancies PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestWriterAlignments::test_atomname_alignment PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestWriterAlignments::test_atomtype_alignment PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom0- CA ] PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom1- OE1] PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom2-SE ] PASSED [ 15%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom3-CA ] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom4-FE ] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom5- P ] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_standalone_pdb PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_pdb_zero_atoms PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_atom_not_match PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_partially_missing_cryst PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_no_atoms_elements PASSED [ 16%] 1023s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_atom_elements PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_elements_roundtrip PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_cryst_meaningless_warning PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_cryst_meaningless_select PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_roundtrip PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_not_int PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_limit[99] PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_limit[-100] PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_segid PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_chainID PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_protein PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_backbone PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_neighborhood PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_n_frames PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_time PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_frame PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_writing_coords[test.pdbqt] PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_writing_coords[test.pdbqt.bz2] PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_writing_coords[test.pdbqt.gz] PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_formatting PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_write_no_charges PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_write_no_chainids_with_segids PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_get_writer PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_ArgCACharges PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_ProNCharges PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_coordinates PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_dimensions PASSED [ 16%] 1024s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_distances PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_dt PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_frame PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_frame_index_0 PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_frame_index_1_raises_IndexError PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_full_slice PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_hydrogenCharges PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_last_slice PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_load_file PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_n_atoms PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_n_frames PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_numres PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_pickle_singleframe_reader PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_time PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_total_charge PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_simple_writer_roundtrip[test.pqr] PASSED [ 16%] 1025s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_simple_writer_roundtrip[test.pqr.bz2] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_simple_writer_roundtrip[test.pqr.gz] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_writer_noChainID PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_write_withChainID PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_timestep_not_modified_by_writer PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_total_charge PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_names_writing PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_resnames_writing PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_radii_writing PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_charges_writing PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_required_attributes PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_iter PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_close PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_rewind PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_context PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_len PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_raises_StopIteration PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_unknown_order_key[turnip] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_unknown_order_key[abc] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_incorrect_order_key[faac] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_incorrect_order_key[affc] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_incorrect_order_key[afcc] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_incorrect_order_key[] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-None-None] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-5-None] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[2-None-None] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[2-5-None] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-None-2] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-None--1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None--1--1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[10-0--1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-10-1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-10-2] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-20-None] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-20-2] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-5-2] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[5-None--1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-5--1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-10-1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[-10-None-1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-None--1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-5--20] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[5-1-1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[1-5--1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[-100-None-None] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-None-None] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[-2-10--2] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-0-1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[10-1-2] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice_VE_1 PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice_TE_1 PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl0-list] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl0-array] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl1-list] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl1-array] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl2-list] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl2-array] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl3-list] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl3-array] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl4-list] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl4-array] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl5-list] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl5-array] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl6-list] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl6-array] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl0] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl1] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl2] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl3] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl4] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl5] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl6] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl7] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl8] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl9] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl10] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl11] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl12] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl13] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl14] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len_empty[list] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len_empty[array] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl10] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl11] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl12] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl13] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl14] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl10] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl11] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl12] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl13] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl14] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl10] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl11] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl12] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl13] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl14] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl10] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl11] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl12] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl13] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl14] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl10] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl11] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl12] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl13] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl14] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl10] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl11] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl12] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl13] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl14] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl10] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl11] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl12] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl13] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl14] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl10] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl11] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl12] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl13] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl14] PASSED [ 16%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl10] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl11] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl12] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl13] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl14] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl10] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl11] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl12] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl13] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl14] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl15] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl10] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl11] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl12] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl13] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl14] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl15] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl10] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl11] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl12] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl13] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl14] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl15] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl10] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl11] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl12] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl13] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl14] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl15] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl10] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl11] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl12] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl13] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl14] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl15] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl10] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl11] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl12] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl13] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl14] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl15] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_list_TE PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_array_TE PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl10] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl11] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl12] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl13] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl14] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl10] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl11] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl12] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl13] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl14] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_required_attributes PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_iter PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_close PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_context PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_len PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_raises_StopIteration PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_unknown_order_key[turnip] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_unknown_order_key[abc] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_incorrect_order_key[faac] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_incorrect_order_key[affc] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_incorrect_order_key[afcc] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_incorrect_order_key[] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_next PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem_2 PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem_IE PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem_IE_2 PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_slice_1 PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_slice_2 PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_reopen PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_rewind PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_read_frame PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_iter_rewind PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_neg PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_neg_IE PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_pos_IE PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_slice PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_slice2 PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_ndarray PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_TE PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_len PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_iter PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_repr PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_repr_with_box PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_repr_no_box PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_default_dtype_npf32 PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dimensions PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dimensions_set_box[int] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dimensions_set_box[float32] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dimensions_set_box[float64] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_volume PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_triclinic_vectors PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_set_triclinic_vectors PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_set_dimensions_None PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_set_triclinic_dimensions_None PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_coordinate_getter_shortcuts PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_coordinate_setter_shortcuts PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_n_atoms PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_n_atoms_readonly PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_n_atoms_presence PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_unitcell_presence PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_data_presence PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_allocate_velocities PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_allocate_forces PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_velocities_remove PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_forces_remove PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_ts PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[True-True-True] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[True-True-False] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[True-False-True] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[True-False-False] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[False-True-True] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[False-True-False] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[False-False-True] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates_mismatch PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates_nodata PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_supply_dt PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_redefine_dt PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_delete_dt PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_supply_time_offset PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_time PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_delete_time PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_time_with_offset PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dt PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_change_dt PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dt_with_offset PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_time_overrides_dt_with_offset PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy[_check_copy] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy[_check_independent] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy[_check_copy_slice_indices] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy[_check_copy_slice_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy[_check_npint_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts0-_check_copy] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts0-_check_independent] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts0-_check_copy_slice_indices] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts0-_check_copy_slice_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts0-_check_npint_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts1-_check_copy] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts1-_check_independent] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts1-_check_copy_slice_indices] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts1-_check_copy_slice_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts1-_check_npint_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts2-_check_copy] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts2-_check_independent] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts2-_check_copy_slice_indices] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts2-_check_copy_slice_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts2-_check_npint_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts3-_check_copy] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts3-_check_independent] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts3-_check_copy_slice_indices] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts3-_check_copy_slice_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts3-_check_npint_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts4-_check_copy] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts4-_check_independent] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts4-_check_copy_slice_indices] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts4-_check_copy_slice_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts4-_check_npint_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts5-_check_copy] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts5-_check_independent] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts5-_check_copy_slice_indices] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts5-_check_copy_slice_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts5-_check_npint_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts6-_check_copy] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts6-_check_independent] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts6-_check_copy_slice_indices] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts6-_check_copy_slice_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts6-_check_npint_slice] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts0] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts1] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts2] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts3] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts4] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts5] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts6] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts0] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts1] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts2] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts3] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts4] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts5] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts6] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[True-True-True] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[True-True-False] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[True-False-True] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[True-False-False] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[False-True-True] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[False-True-False] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[False-False-True] PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_wrong_class_equality PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_wrong_frame_equality PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_wrong_n_atoms_equality PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_wrong_pos_equality PASSED [ 17%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_no_pos_inequality PASSED [ 18%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_vels_equality PASSED [ 18%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_mismatched_vels_equality PASSED [ 18%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_wrong_vels_equality PASSED [ 18%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_forces_equality PASSED [ 18%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_mismatched_forces_equality PASSED [ 18%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_wrong_forces_equality PASSED [ 18%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dims_mismatch_inequality[None] PASSED [ 18%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dims_mismatch_inequality[dim11] PASSED [ 18%] 1026s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe0] PASSED [ 18%] 1027s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe1] PASSED [ 18%] 1027s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe2] PASSED [ 18%] 1027s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe3] PASSED [ 18%] 1027s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe4] PASSED [ 18%] 1027s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe5] PASSED [ 18%] 1027s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe6] PASSED [ 18%] 1028s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe7] PASSED [ 18%] 1028s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe8] PASSED [ 18%] 1028s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe9] PASSED [ 18%] 1028s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe10] PASSED [ 18%] 1028s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe11] PASSED [ 18%] 1028s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe12] PASSED [ 18%] 1028s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe13] PASSED [ 18%] 1028s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe14] PASSED [ 18%] 1028s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe15] PASSED [ 18%] 1028s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe16] PASSED [ 18%] 1029s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe17] PASSED [ 18%] 1029s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe18] PASSED [ 18%] 1029s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe0] PASSED [ 18%] 1029s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe1] PASSED [ 18%] 1029s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe2] PASSED [ 18%] 1029s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe3] PASSED [ 18%] 1029s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe4] PASSED [ 18%] 1029s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe5] PASSED [ 18%] 1029s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe6] PASSED [ 18%] 1030s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe7] PASSED [ 18%] 1030s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe8] PASSED [ 18%] 1030s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe9] PASSED [ 18%] 1030s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe10] PASSED [ 18%] 1030s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe11] PASSED [ 18%] 1030s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe12] PASSED [ 18%] 1030s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe13] PASSED [ 18%] 1030s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe14] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe15] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe16] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe17] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe18] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni0] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni1] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni2] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni3] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni4] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni5] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni6] PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_pytng_not_present_raises PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_parse_n_atoms_no_pytng PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_n_atoms SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_n_frames SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_first_frame SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_double_close SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_dt SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_ts_dt_matches_reader SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_total_time SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_first_dimensions SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_changing_dimensions SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_volume SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_add_same_auxname_raises_ValueError SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_remove_auxiliary SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_remove_nonexistant_auxiliary_raises_ValueError SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_auxiliary SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_get_aux_attribute SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_as_aux_cutoff SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_reload_auxiliaries_from_description SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_stop_iter SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_iter SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_2iter SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_slice SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_switch_frame SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformation_rewind SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_copy SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_add_another_transformations_raises_ValueError SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_pickle_reader SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_frame_collect_all_same SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[fac] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[fca] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[afc] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[acf] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[caf] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[cfa] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_values[slice0] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_values[slice1] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_values[slice2] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_asel_shape[index 1] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_asel_shape[index 2] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_asel_shape[index 1 to 3] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_empty_asel SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_empty_atomgroup SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_asel_warns_deprecation SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_atomgroup SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_atomgroup_asel_mutex SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_last_frame SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_go_over_last_frame SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_frame_jump SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_frame_jump_issue1942 SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_next_gives_second_frame SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_reopen SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_rename_aux SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_as_aux_highf SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_as_aux_lowf SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_rewinds[indexed] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_rewinds[sliced] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_rewinds[all] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_pickle_next_ts_reader SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_pickle_last_ts_reader SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_get_writer_1 SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_get_writer_2 SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_tng_traj_uneven_blocks SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_n_atoms SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_n_frames SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_block_names SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_special_blocks SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_additional_blocks SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_initial_frame_is_0 SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_starts_with_first_frame SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_rewind SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_full_slice SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_random_access SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_frame_overrun SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_positions_first_frame SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_box_first_frame SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_positions_last_frame SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_box_last_frame SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[0] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[20] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[50] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[100] SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_lambda_in_ts SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_read_box_fail_strange_step SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_read_pos_fail_strange_step SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_additional_block_read_fails SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_parse_n_atoms SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_n_atoms SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_n_frames SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_block_names SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_special_blocks SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_read_vels_fail_strange_step SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_read_force_fail_strange_step SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_writer_raises_notimpl SKIPPED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_initial_frame_is_0 PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_positions PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_dimensions PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_n_frames PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_n_atoms PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_frame PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_time PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_dt PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_data_step PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_periodic PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_rewind PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_random_access PASSED [ 18%] 1031s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_read_frame_reopens PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_trc_n_atoms PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_periodic PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_trc_dimensions PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_open_twice PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBoxNoConvert::test_trc_dimensions PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_trc_n_atoms PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_periodic PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_trc_dimensions PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_trc_distances PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTruncOctBox::test_universe PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCGenboxOrigin::test_universe PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCGenboxEuler::test_universe PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCEmptyFile::test_universe PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_n_atoms PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_periodic PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_dimensions PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_n_frames PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_frame PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_time PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_load_prm PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_n_atoms PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_n_frames PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_periodic PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_amber_proteinselection PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_sum_centres_of_geometry PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_initial_frame_is_0 PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_starts_with_first_frame PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_rewind PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_full_slice PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_random_access PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_read_frame_reopens PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_load_prm PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_n_atoms PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_n_frames PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_periodic PASSED [ 18%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_amber_proteinselection PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_sum_centres_of_geometry PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_initial_frame_is_0 PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_starts_with_first_frame PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_rewind PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_full_slice PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_random_access PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_read_frame_reopens PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_load_prm PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_n_atoms PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_n_frames PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_periodic PASSED [ 19%] 1032s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_amber_proteinselection PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_sum_centres_of_geometry PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_initial_frame_is_0 PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_starts_with_first_frame PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_rewind PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_full_slice PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_random_access PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trj.py::test_trj_no_natoms PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trz.py::test_deprecated_trz_reader PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trz.py::test_deprecated_trz_writer PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_load_trz PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_next_trz PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_rewind_trz PASSED [ 19%] 1033s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_n_frames PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_seeking PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_volume PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_unitcell PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_coordinates PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_velocities PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_delta PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_time PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_title PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_get_writer PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_get_writer_2 PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_get_wrong_n_atoms PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_read_zero_box PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter::test_write_trajectory PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter::test_long_title PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter::test_no_box_warning PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter2::test_writer_trz_from_other PASSED [ 19%] 1034s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter2::test_no_dt_warning PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestWrite_Partial_Timestep::test_write_trajectory PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_txyz_positions PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arc_positions PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arc_positions_frame_2 PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arc_traj_length PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arcpbc_traj_length PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_pbc_boxsize PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_load_prm PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_n_atoms PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_n_frames PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_periodic PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_amber_proteinselection PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_sum_centres_of_geometry PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_initial_frame_is_0 PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_starts_with_first_frame PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_rewind PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_full_slice PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_random_access PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_read_frame_reopens PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_len PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_getting PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_slicing PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_slicing_2 PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_position PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_velocity PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_force PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_unitcell PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_n_atoms[ascii] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_n_atoms[bz2] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_n_atoms[gzip] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_length[ascii] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_length[bz2] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_length[gzip] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_seeking[ascii] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_seeking[bz2] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_seeking[gzip] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_boxsize[ascii] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_boxsize[bz2] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_boxsize[gzip] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_atom_reordering[ascii] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_atom_reordering[bz2] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_atom_reordering[gzip] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_true-fields0] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_single-fields1] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_multiple-fields2] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_wrong_format_additional_colums[u_additional_columns_wrong_format] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_warning[u_additional_columns_not_present] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_n_atoms PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_length PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_seeking PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_boxsize PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_atom_reordering PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_additional_columns[u_additional_columns_true-fields0] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_additional_columns[u_additional_columns_single-fields1] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_additional_columns[u_additional_columns_multiple-fields2] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_wrong_format_additional_colums[u_additional_columns_wrong_format] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_warning[u_additional_columns_not_present] PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_n_frames PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_rewind PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_iteration PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_slice_iteration PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_len PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_getting PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_slicing PASSED [ 19%] 1035s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_slicing_2 PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_position PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_velocity PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_force PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_unitcell PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_load_prm PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_n_atoms PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_n_frames PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_periodic PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_amber_proteinselection PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_sum_centres_of_geometry PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_initial_frame_is_0 PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_starts_with_first_frame PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_rewind PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_full_slice PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_random_access PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_read_frame_reopens PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinARC::test_n_frames PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinARC::test_positions PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinARC::test_positions_2 PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[CRDWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[ChemfilesWriter] SKIPPED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[DATAWriter] SKIPPED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[DCDWriter0] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[DCDWriter1] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[FHIAIMSWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[GROWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[H5MDWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[MOL2Writer] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[MultiPDBWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[NAMDBINWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[NCDFWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[NullWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[PDBQTWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[PDBWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[PQRWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[TRRWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[TRZWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[XTCWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[XYZWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[CRDWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[ChemfilesWriter] SKIPPED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[DATAWriter] SKIPPED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[DCDWriter0] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[DCDWriter1] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[FHIAIMSWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[GROWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[H5MDWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[MOL2Writer] SKIPPED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[MultiPDBWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[NAMDBINWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[NCDFWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[NullWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[PDBQTWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[PDBWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[PQRWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[TRRWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[TRZWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[XTCWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[XYZWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[CRDWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[ChemfilesWriter] SKIPPED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[DATAWriter] SKIPPED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[DCDWriter0] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[DCDWriter1] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[FHIAIMSWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[GROWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[H5MDWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[MOL2Writer] SKIPPED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[MultiPDBWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[NAMDBINWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[NCDFWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[NullWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[PDBQTWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[PDBWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[PQRWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[TRRWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[TRZWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[XTCWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[XYZWriter] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_default_multiframe PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_singleframe PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_multiframe_magic2 PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_singleframe_magic2 PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_offsets_filename[foo.xtc-kwargs0-.foo.xtc_offsets.npz] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_offsets_filename[foo.xtc-kwargs1-.foo.xtc_offsets.npz] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_offsets_filename[bar.0001.trr-kwargs2-.bar.0001.trr_offsets.npzzzz] PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_Sub::test_load_new_raises_ValueError PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_Sub::test_sub_coordinates PASSED [ 19%] 1036s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_Sub::test_load_new_raises_ValueError PASSED [ 20%] 1036s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_Sub::test_sub_coordinates PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_rewind_xdrtrj PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_next_xdrtrj PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_jump_xdrtrj PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_jump_lastframe_xdrtrj PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_slice_xdrtrj PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_reverse_xdrtrj PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_coordinates PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_unitcell PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_volume PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_dt PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_totaltime PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_frame PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_time PASSED [ 20%] 1037s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_get_Writer PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_Writer PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_EOFraisesStopIteration PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_read_next_timestep_ts_no_positions PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReaderClass::test_with_statement PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_rewind_xdrtrj PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_next_xdrtrj PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_jump_xdrtrj PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_jump_lastframe_xdrtrj PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_slice_xdrtrj PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_reverse_xdrtrj PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_coordinates PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_unitcell PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_volume PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_dt PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_totaltime PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_frame PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_time PASSED [ 20%] 1038s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_get_Writer PASSED [ 20%] 1039s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_Writer PASSED [ 20%] 1039s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_EOFraisesStopIteration PASSED [ 20%] 1039s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_read_next_timestep_ts_no_positions PASSED [ 20%] 1039s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_velocities PASSED [ 20%] 1040s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCNoConversion::test_coordinates PASSED [ 20%] 1040s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRNoConversion::test_coordinates PASSED [ 20%] 1041s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter::test_write_trajectory PASSED [ 20%] 1041s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter::test_timestep_not_modified_by_writer PASSED [ 20%] 1042s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_write_trajectory PASSED [ 20%] 1042s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_timestep_not_modified_by_writer PASSED [ 20%] 1043s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_velocities PASSED [ 20%] 1044s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_gaps PASSED [ 20%] 1044s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_data_preservation PASSED [ 20%] 1045s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterSingleFrame::test_single_frame_GRO PASSED [ 20%] 1046s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterSingleFrame::test_single_frame_PDB PASSED [ 20%] 1046s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterSingleFrame::test_single_frame_CRD PASSED [ 20%] 1047s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterSingleFrame::test_single_frame_GRO PASSED [ 20%] 1048s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterSingleFrame::test_single_frame_PDB PASSED [ 20%] 1048s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterSingleFrame::test_single_frame_CRD PASSED [ 20%] 1048s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterIssue117::test_write_trajectory PASSED [ 20%] 1048s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterIssue117::test_write_trajectory PASSED [ 20%] 1048s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_triclinic_box PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_n_atoms PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_n_frames PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_first_frame PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_double_close PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_get_writer_1 PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_get_writer_2 PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_dt PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_ts_dt_matches_reader PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_total_time PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_first_dimensions PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_changing_dimensions PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_volume PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_add_same_auxname_raises_ValueError PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_remove_auxiliary PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_auxiliary PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_get_aux_attribute PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_as_aux_cutoff PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_reload_auxiliaries_from_description PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_stop_iter PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_iter PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_2iter PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_slice PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_switch_frame PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformation_rewind PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_copy PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_add_another_transformations_raises_ValueError PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_pickle_reader PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_frame_collect_all_same PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[fac] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[fca] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[afc] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[acf] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[caf] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[cfa] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_values[slice0] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_values[slice1] SKIPPED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_values[slice2] SKIPPED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_asel_shape[index 1] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_asel_shape[index 2] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_asel_shape[index 1 to 3] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_empty_asel PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_empty_atomgroup PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_asel_warns_deprecation PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_atomgroup PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_atomgroup_asel_mutex PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_last_frame PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_go_over_last_frame PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_frame_jump PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_frame_jump_issue1942 PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_next_gives_second_frame PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_reopen PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_rename_aux PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_as_aux_highf PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_as_aux_lowf PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_rewinds[indexed] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_rewinds[sliced] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_rewinds[all] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_pickle_next_ts_reader PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_pickle_last_ts_reader PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_different_box PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_trajectory_atomgroup PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_trajectory_universe PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_selection PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_none PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_no_container PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_not_changing_ts PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_different_precision PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_n_atoms PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_n_frames PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_first_frame PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_double_close PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_get_writer_1 PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_get_writer_2 PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_dt PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_ts_dt_matches_reader PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_total_time PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_first_dimensions PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_changing_dimensions PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_volume PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_add_same_auxname_raises_ValueError PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_remove_auxiliary PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_auxiliary PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_get_aux_attribute PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_as_aux_cutoff PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_reload_auxiliaries_from_description PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_stop_iter PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_iter PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_2iter PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_slice PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_switch_frame PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformation_rewind PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_copy PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_add_another_transformations_raises_ValueError PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_pickle_reader PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_frame_collect_all_same PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[fac] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[fca] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[afc] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[acf] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[caf] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[cfa] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_values[slice0] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_values[slice1] SKIPPED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_values[slice2] SKIPPED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_asel_shape[index 1] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_asel_shape[index 2] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_asel_shape[index 1 to 3] PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_empty_asel PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_empty_atomgroup PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_asel_warns_deprecation PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_atomgroup PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_atomgroup_asel_mutex PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_last_frame PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_go_over_last_frame PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_frame_jump PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_frame_jump_issue1942 PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_next_gives_second_frame PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_reopen PASSED [ 20%] 1049s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_rename_aux PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_as_aux_highf PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_as_aux_lowf PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_rewinds[indexed] PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_rewinds[sliced] PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_rewinds[all] PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_pickle_next_ts_reader PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_pickle_last_ts_reader PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_different_box PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_trajectory_atomgroup PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_trajectory_universe PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_selection PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_none PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_no_container PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_not_changing_ts PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_lambda PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_offsets PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_reload_offsets PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_nonexistent_offsets_file PASSED [ 20%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_corrupted_offsets_file PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_reload_offsets_if_offsets_readin_io_fails PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_reload_offsets_if_offsets_readin_value_fails PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_size_mismatch PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_ctime_mismatch PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_natoms_mismatch PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_last_frame_wrong PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_unsupported_format PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_readonly PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_offset_lock_created PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_offsets PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_reload_offsets PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_nonexistent_offsets_file PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_corrupted_offsets_file PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_reload_offsets_if_offsets_readin_io_fails PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_reload_offsets_if_offsets_readin_value_fails PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_size_mismatch PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_ctime_mismatch PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_natoms_mismatch PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_last_frame_wrong PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_unsupported_format PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_readonly PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_offset_lock_created PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_pathlib PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_n_atoms PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_n_frames PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_first_frame PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_double_close PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_get_writer_1 PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_get_writer_2 PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_dt PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_ts_dt_matches_reader PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_total_time PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_first_dimensions PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_changing_dimensions PASSED [ 21%] 1050s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_volume PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_add_same_auxname_raises_ValueError PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_remove_auxiliary PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_auxiliary PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_get_aux_attribute PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_as_aux_cutoff PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_reload_auxiliaries_from_description PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_stop_iter PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_iter PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_2iter PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_slice PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_switch_frame PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformation_rewind PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_copy PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_add_another_transformations_raises_ValueError PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_pickle_reader PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_frame_collect_all_same PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[fac] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[fca] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[afc] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[acf] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[caf] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[cfa] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_values[slice0] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_values[slice1] SKIPPED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_values[slice2] SKIPPED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_asel_shape[index 1] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_asel_shape[index 2] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_empty_asel PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_empty_atomgroup PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_asel_warns_deprecation PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_atomgroup PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_atomgroup_asel_mutex PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_last_frame PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_go_over_last_frame PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_frame_jump PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_frame_jump_issue1942 PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_next_gives_second_frame PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_reopen PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_rename_aux PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_as_aux_highf PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_as_aux_lowf PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_rewinds[indexed] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_rewinds[sliced] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_rewinds[all] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_pickle_next_ts_reader PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_pickle_last_ts_reader PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_double_open PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_different_box PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_trajectory_atomgroup PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_trajectory_universe PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_none PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_no_container PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_not_changing_ts PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_selection PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_different_models_in_trajectory PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_no_conversion PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_remark[Curstom Remark-Curstom Remark] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_remark[-] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_remark[None-frame 0 | Written by MDAnalysis XYZWriter (release 2.8.0)] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_n_atoms PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_n_frames PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_first_frame PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_double_close PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_get_writer_1 PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_get_writer_2 PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_dt PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_ts_dt_matches_reader PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_total_time PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_first_dimensions PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_changing_dimensions PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_volume PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_add_same_auxname_raises_ValueError PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_remove_auxiliary PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_auxiliary PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_get_aux_attribute PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_as_aux_cutoff PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_reload_auxiliaries_from_description PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_stop_iter PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_iter PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_2iter PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_slice PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_switch_frame PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformation_rewind PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_copy PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_add_another_transformations_raises_ValueError PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_pickle_reader PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_frame_collect_all_same PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[fac] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[fca] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[afc] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[acf] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[caf] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[cfa] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_values[slice0] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_values[slice1] SKIPPED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_values[slice2] SKIPPED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_asel_shape[index 1] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_asel_shape[index 2] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_empty_asel PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_empty_atomgroup PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_asel_warns_deprecation PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_atomgroup PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_atomgroup_asel_mutex PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_last_frame PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_go_over_last_frame PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_frame_jump PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_frame_jump_issue1942 PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_next_gives_second_frame PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_reopen PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_rename_aux PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_as_aux_highf PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_as_aux_lowf PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_rewinds[indexed] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_rewinds[sliced] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_rewinds[all] PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_pickle_next_ts_reader PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_pickle_last_ts_reader PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_double_open PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_different_box PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_trajectory_atomgroup PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_trajectory_universe PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_none PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_no_container PASSED [ 21%] 1051s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_not_changing_ts PASSED [ 21%] 1052s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_selection PASSED [ 21%] 1052s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_different_models_in_trajectory PASSED [ 21%] 1052s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_no_conversion PASSED [ 21%] 1052s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_remark[Curstom Remark-Curstom Remark] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_remark[-] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_remark[None-frame 0 | Written by MDAnalysis XYZWriter (release 2.8.0)] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_no_names PASSED [ 21%] 1052s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_elements_or_names[elements] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_elements_or_names[names] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_elements_and_names PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_case_insensitive SKIPPED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_lib_as_method SKIPPED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_kwargs SKIPPED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_lib_method_kwargs SKIPPED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accessors.py::TestAccessor::test_access_from_class PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accessors.py::TestConverterWrapper::test_raises_valueerror PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accessors.py::TestConverterWrapper::test_single_instance SKIPPED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute[atoms] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute[residues] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute[segments] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_different_func[atoms] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_different_func[residues] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_different_func[segments] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-resindices-residues] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-segindices-segments] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-molnums-molecules] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-fragindices-fragments] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-resindices-residues] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-segindices-segments] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-molnums-molecules] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-fragindices-fragments] PASSED [ 21%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-resindices-residues] PASSED [ 22%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-segindices-segments] PASSED [ 22%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-molnums-molecules] PASSED [ 22%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-fragindices-fragments] PASSED [ 22%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongname[atoms] PASSED [ 22%] 1052s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongname[residues] PASSED [ 22%] 1053s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongname[segments] PASSED [ 22%] 1053s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongcomponent[atoms] PASSED [ 22%] 1053s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongcomponent[residues] PASSED [ 22%] 1053s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongcomponent[segments] PASSED [ 22%] 1053s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nobonds[atoms] PASSED [ 22%] 1054s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nobonds[residues] PASSED [ 22%] 1054s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nobonds[segments] PASSED [ 22%] 1055s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nomolnums[atoms] PASSED [ 22%] 1055s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nomolnums[residues] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nomolnums[segments] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute[atoms] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute[residues] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute[segments] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_wrongshape[atoms] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_wrongshape[residues] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_wrongshape[segments] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-resindices-residues] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-segindices-segments] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-molnums-molecules] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-fragindices-fragments] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-resindices-residues] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-segindices-segments] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-molnums-molecules] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-fragindices-fragments] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-resindices-residues] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-segindices-segments] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-molnums-molecules] PASSED [ 22%] 1056s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-fragindices-fragments] PASSED [ 22%] 1057s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge[atoms] PASSED [ 22%] 1057s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge[residues] PASSED [ 22%] 1057s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge[segments] PASSED [ 22%] 1057s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[atoms-resids-residues] PASSED [ 22%] 1057s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[atoms-segids-segments] PASSED [ 22%] 1057s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[atoms-fragindices-fragments] PASSED [ 22%] 1057s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[residues-resids-residues] PASSED [ 22%] 1057s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[residues-segids-segments] PASSED [ 22%] 1057s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[residues-fragindices-fragments] PASSED [ 22%] 1058s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[segments-resids-residues] PASSED [ 22%] 1058s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[segments-segids-segments] PASSED [ 22%] 1058s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[segments-fragindices-fragments] PASSED [ 22%] 1058s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_duplicates[atoms] PASSED [ 22%] 1059s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_duplicates[residues] PASSED [ 22%] 1059s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_duplicates[segments] PASSED [ 22%] 1059s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass[atoms] PASSED [ 22%] 1059s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass[residues] PASSED [ 22%] 1059s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass[segments] PASSED [ 22%] 1059s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[atoms-resids-residues] PASSED [ 22%] 1059s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[atoms-segids-segments] PASSED [ 22%] 1059s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[atoms-fragindices-fragments] PASSED [ 22%] 1059s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[residues-resids-residues] PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[residues-segids-segments] PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[residues-fragindices-fragments] PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[segments-resids-residues] PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[segments-segids-segments] PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[segments-fragindices-fragments] PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_duplicates[atoms] PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_duplicates[residues] PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_duplicates[segments] PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_com PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_no_center PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_residues_com_coc PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_segment PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_fragments PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_com PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_coc PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_no_center PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_residues PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_segment PASSED [ 22%] 1060s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_fragments PASSED [ 22%] 1061s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_attributes_names PASSED [ 22%] 1061s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attribute_name PASSED [ 22%] 1061s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attribute_type PASSED [ 22%] 1061s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attribute_mass PASSED [ 22%] 1061s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attributes_charge PASSED [ 22%] 1061s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_attributes_positions PASSED [ 22%] 1061s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_atom_selection PASSED [ 22%] 1061s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_hierarchy PASSED [ 22%] 1061s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_bad_add PASSED [ 22%] 1061s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_add_AG PASSED [ 22%] 1062s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_no_velo PASSED [ 22%] 1062s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_bonded_atoms PASSED [ 22%] 1062s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_undefined_occupancy PASSED [ 22%] 1062s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_atom_pickle[1] PASSED [ 22%] 1062s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_atom_pickle[-1] PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_improper_initialisation PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_velocity_fail PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_force_fail PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_velocity_set_fail PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_force_set_fail PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_bond PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_angle PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_dihedral PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_improper PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[bond] PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[angle] PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[dihedral] PASSED [ 22%] 1063s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[improper] PASSED [ 22%] 1064s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_no_args PASSED [ 22%] 1064s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_raises_unknown_format PASSED [ 22%] 1064s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_coordinates PASSED [ 22%] 1064s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames[frames0] PASSED [ 22%] 1064s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames[frames1] PASSED [ 22%] 1064s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames[frames2] PASSED [ 22%] 1065s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_iterator[frames0] PASSED [ 22%] 1065s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_iterator[frames1] PASSED [ 22%] 1065s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_iterator[frames2] PASSED [ 22%] 1065s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-xtc] PASSED [ 22%] 1065s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-dcd] PASSED [ 22%] 1066s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-pdb] PASSED [ 22%] 1066s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-xyz] PASSED [ 22%] 1066s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-PDB] PASSED [ 22%] 1067s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-xtc] PASSED [ 22%] 1067s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-dcd] PASSED [ 22%] 1067s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-pdb] PASSED [ 22%] 1068s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-xyz] PASSED [ 22%] 1068s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-PDB] PASSED [ 22%] 1068s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-xtc] PASSED [ 22%] 1069s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-dcd] PASSED [ 22%] 1069s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-pdb] PASSED [ 22%] 1070s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-xyz] PASSED [ 22%] 1070s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-PDB] PASSED [ 22%] 1070s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_all[] PASSED [ 22%] 1071s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_all[.gz] PASSED [ 22%] 1071s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_all[.bz2] PASSED [ 22%] 1071s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[invalid] PASSED [ 22%] 1071s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[8] PASSED [ 22%] 1071s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[True] PASSED [ 22%] 1071s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[False] PASSED [ 22%] 1071s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[3.2] PASSED [ 22%] 1072s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_incompatible_arguments PASSED [ 22%] 1072s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_incompatible_trajectories PASSED [ 22%] 1072s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_no_traj_move PASSED [ 22%] 1072s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_selection PASSED [ 22%] 1072s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_bogus_kwarg_pdb PASSED [ 22%] 1072s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_atoms[] PASSED [ 22%] 1073s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_atoms[.gz] PASSED [ 22%] 1074s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_atoms[.bz2] PASSED [ 22%] 1075s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_empty_atomgroup PASSED [ 22%] 1075s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_selection[name CA] PASSED [ 22%] 1075s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_selection[segid 4AKE and resname LEU] PASSED [ 22%] 1076s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_selection[segid 4AKE] PASSED [ 22%] 1076s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_Residue PASSED [ 22%] 1076s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_Universe PASSED [ 22%] 1076s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_atoms[] PASSED [ 22%] 1077s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_atoms[.gz] PASSED [ 22%] 1077s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_atoms[.bz2] PASSED [ 22%] 1077s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_empty_atomgroup PASSED [ 22%] 1077s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_selection[name CA] PASSED [ 22%] 1077s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_selection[segid 4AKE and resname LEU] PASSED [ 22%] 1077s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_selection[segid 4AKE] PASSED [ 22%] 1078s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_Residue PASSED [ 22%] 1078s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_Universe PASSED [ 22%] 1078s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_translate PASSED [ 22%] 1078s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_rotate PASSED [ 22%] 1078s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_rotateby PASSED [ 22%] 1078s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_transform_rotation_only PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_transform_translation_only PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_transform_translation_and_rotation PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_1 PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_2 PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_duplicates PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_wrong_length PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_wrong_shape PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-fragments-atoms] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-fragments-residues] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-fragments-segments] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-molecules-atoms] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-molecules-residues] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-molecules-segments] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-residues-atoms] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-residues-residues] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-residues-segments] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-group-atoms] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-group-residues] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-group-segments] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-segments-atoms] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-segments-residues] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-segments-segments] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-fragments-atoms] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-fragments-residues] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-fragments-segments] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-molecules-atoms] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-molecules-residues] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-molecules-segments] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-residues-atoms] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-residues-residues] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-residues-segments] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-group-atoms] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-group-residues] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-group-segments] PASSED [ 22%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-segments-atoms] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-segments-residues] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-segments-segments] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap_wrap_true_group PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_atoms PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_residues PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_segments PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_VE PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[name-names-string] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[type-types-string] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[altLoc-altLocs-string] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[charge-charges-float] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[mass-masses-float] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[radius-radii-float] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[bfactor-bfactors-float] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[occupancy-occupancies-float] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[name-names-string] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[type-types-string] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[altLoc-altLocs-string] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[charge-charges-float] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[mass-masses-float] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[radius-radii-float] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[bfactor-bfactors-float] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[occupancy-occupancies-float] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_unique_restore_mask PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestOrphans::test_atom PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestOrphans::test_atomgroup PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[0-0] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[0-1] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[1-0] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[1-1] PASSED [ 23%] 1079s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_adding_empty_ags PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection_name[kwargs0-names0] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection_name[kwargs1-names1] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection_name[kwargs2-names2] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_single PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_empty PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_name[kwargs0-names0] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_name[kwargs1-names1] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_name[kwargs2-names2] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection_name[kwargs0-names0] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection_name[kwargs1-names1] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection_name[kwargs2-names2] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_single PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_empty PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_name[kwargs0-names0] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_name[kwargs1-names1] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_name[kwargs2-names2] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection_name[kwargs0-names0] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection_name[kwargs1-names1] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection_name[kwargs2-names2] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_empty PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_single PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_name[kwargs0-names0] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_name[kwargs1-names1] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_name[kwargs2-names2] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs0-names0] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs1-names1] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs2-names2] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs3-names3] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_single PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_empty PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[CYS] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[ILE] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[SER] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[THR] PASSED [ 23%] 1080s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[VAL] PASSED [ 23%] 1081s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[CYSH] PASSED [ 23%] 1081s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[ILE] PASSED [ 23%] 1081s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[SER] PASSED [ 23%] 1081s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[THR] PASSED [ 23%] 1082s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[VAL] PASSED [ 23%] 1082s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[CYS] PASSED [ 23%] 1082s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[ILE] PASSED [ 23%] 1082s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[SER] PASSED [ 23%] 1082s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[THR] PASSED [ 23%] 1082s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[VAL] PASSED [ 23%] 1082s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[ARG] PASSED [ 23%] 1083s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[ASP] PASSED [ 23%] 1083s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[CYS] PASSED [ 23%] 1084s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[GLN] PASSED [ 23%] 1084s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[GLU] PASSED [ 23%] 1085s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[HIS] PASSED [ 23%] 1085s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[ILE] PASSED [ 23%] 1086s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[LEU] PASSED [ 23%] 1086s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[LYS] PASSED [ 23%] 1087s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[MET] PASSED [ 23%] 1087s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[PHE] PASSED [ 23%] 1088s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[PRO] PASSED [ 23%] 1088s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[SER] PASSED [ 23%] 1089s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[THR] PASSED [ 23%] 1089s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[TRP] PASSED [ 23%] 1090s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[TYR] PASSED [ 23%] 1090s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[VAL] PASSED [ 23%] 1090s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_no_chi1[ALA] PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_no_chi1[GLY] PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_sel_fail PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_sels_fail PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_sel_fail PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_sels_fail PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_sel_fail PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_sels_fail PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_ch1_sel_fail PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_sels_fail PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_phi PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_psi PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_omega PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_chi1 PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_nodep PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_nodep PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_nodep PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_nodep PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_geometry-True-ref0] PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_geometry-False-ref1] PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_mass-True-ref0] PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_mass-False-ref1] PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-moment_of_inertia-True-ref0] PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-moment_of_inertia-False-ref1] PASSED [ 23%] 1091s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-asphericity-True-ref0] PASSED [ 23%] 1092s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-asphericity-False-ref1] PASSED [ 23%] 1092s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-shape_parameter-True-ref0] PASSED [ 23%] 1092s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-shape_parameter-False-ref1] PASSED [ 23%] 1092s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_geometry-True-ref0] PASSED [ 23%] 1092s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_geometry-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_mass-True-ref0] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_mass-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-moment_of_inertia-True-ref0] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-moment_of_inertia-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-asphericity-True-ref0] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-asphericity-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-shape_parameter-True-ref0] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-shape_parameter-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_geometry-True-ref0] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_geometry-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_mass-True-ref0] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_mass-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[moment_of_inertia-True-ref0] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[moment_of_inertia-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[asphericity-True-ref0] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[asphericity-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_geometry-True-ref0] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_geometry-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_mass-True-ref0] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_mass-False-ref1] PASSED [ 23%] 1093s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[radius_of_gyration-True-ref0] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[radius_of_gyration-False-ref1] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[shape_parameter-True-ref0] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[shape_parameter-False-ref1] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[asphericity-True-ref0] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[asphericity-False-ref1] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[moment_of_inertia-True-ref0] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[moment_of_inertia-False-ref1] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bbox-True-ref0] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bbox-False-ref1] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bsphere-True-ref0] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bsphere-False-ref1] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[principal_axes-True-ref0] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[principal_axes-False-ref1] PASSED [ 23%] 1094s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_int PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_slice PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_slice2 PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_IE PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bad_make PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_invalid_index_initialisation PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_n_atoms PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_n_residues PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_zero_atoms_residues PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_n_segments PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_zero_atoms_segments PASSED [ 23%] 1095s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resids_dim PASSED [ 23%] 1096s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnums_dim PASSED [ 23%] 1096s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_segids_dim PASSED [ 23%] 1096s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_len PASSED [ 23%] 1096s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_of_geometry PASSED [ 23%] 1096s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_of_mass PASSED [ 23%] 1096s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_duplicates[center_of_geometry] PASSED [ 23%] 1096s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_duplicates[center_of_mass] PASSED [ 23%] 1096s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[resids-residues-center_of_geometry] PASSED [ 23%] 1096s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[resids-residues-center_of_mass] PASSED [ 23%] 1097s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[segids-segments-center_of_geometry] PASSED [ 23%] 1097s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[segids-segments-center_of_mass] PASSED [ 23%] 1097s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-resids-residues-center_of_geometry] PASSED [ 23%] 1097s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-resids-residues-center_of_mass] PASSED [ 23%] 1097s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-segids-segments-center_of_geometry] PASSED [ 23%] 1098s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-segids-segments-center_of_mass] PASSED [ 23%] 1098s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-resids-residues-center_of_geometry] PASSED [ 23%] 1098s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-resids-residues-center_of_mass] PASSED [ 23%] 1098s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-segids-segments-center_of_geometry] PASSED [ 23%] 1098s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-segids-segments-center_of_mass] PASSED [ 23%] 1099s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[molnums-molecules-center_of_geometry] PASSED [ 24%] 1099s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[molnums-molecules-center_of_mass] PASSED [ 24%] 1100s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[fragindices-fragments-center_of_geometry] PASSED [ 24%] 1101s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[fragindices-fragments-center_of_mass] PASSED [ 24%] 1102s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-molnums-molecules-center_of_geometry] PASSED [ 24%] 1104s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-molnums-molecules-center_of_mass] PASSED [ 24%] 1105s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-fragindices-fragments-center_of_geometry] PASSED [ 24%] 1108s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-fragindices-fragments-center_of_mass] PASSED [ 24%] 1109s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-molnums-molecules-center_of_geometry] PASSED [ 24%] 1109s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-molnums-molecules-center_of_mass] PASSED [ 24%] 1110s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-fragindices-fragments-center_of_geometry] PASSED [ 24%] 1111s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-fragindices-fragments-center_of_mass] PASSED [ 24%] 1111s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_wrong_compound PASSED [ 24%] 1112s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_fail[molecules] PASSED [ 24%] 1112s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_fail[fragments] PASSED [ 24%] 1112s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-group-None] PASSED [ 24%] 1112s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-group-weights1] PASSED [ 24%] 1113s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-group-weights2] PASSED [ 24%] 1113s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-residues-None] PASSED [ 24%] 1113s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-residues-weights1] PASSED [ 24%] 1113s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-residues-weights2] PASSED [ 24%] 1113s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-segments-None] PASSED [ 24%] 1113s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-segments-weights1] PASSED [ 24%] 1113s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-segments-weights2] PASSED [ 24%] 1114s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-molecules-None] PASSED [ 24%] 1114s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-molecules-weights1] PASSED [ 24%] 1114s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-molecules-weights2] PASSED [ 24%] 1114s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-fragments-None] PASSED [ 24%] 1115s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-fragments-weights1] PASSED [ 24%] 1115s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-fragments-weights2] PASSED [ 24%] 1116s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-group-None] PASSED [ 24%] 1116s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-group-weights1] PASSED [ 24%] 1116s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-group-weights2] PASSED [ 24%] 1116s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-residues-None] PASSED [ 24%] 1116s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-residues-weights1] PASSED [ 24%] 1116s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-residues-weights2] PASSED [ 24%] 1116s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-segments-None] PASSED [ 24%] 1117s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-segments-weights1] PASSED [ 24%] 1117s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-segments-weights2] PASSED [ 24%] 1117s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-molecules-None] PASSED [ 24%] 1117s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-molecules-weights1] PASSED [ 24%] 1117s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-molecules-weights2] PASSED [ 24%] 1118s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-fragments-None] PASSED [ 24%] 1118s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-fragments-weights1] PASSED [ 24%] 1118s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-fragments-weights2] PASSED [ 24%] 1118s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-None-False] PASSED [ 24%] 1119s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-None-True] PASSED [ 24%] 1119s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-weights1-False] PASSED [ 24%] 1119s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-weights1-True] PASSED [ 24%] 1119s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-None-False] PASSED [ 24%] 1119s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-None-True] PASSED [ 24%] 1119s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-weights1-False] PASSED [ 24%] 1119s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-weights1-True] PASSED [ 24%] 1120s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-None-False] PASSED [ 24%] 1120s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-None-True] PASSED [ 24%] 1120s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-weights1-False] PASSED [ 24%] 1121s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-weights1-True] PASSED [ 24%] 1121s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-None-False] PASSED [ 24%] 1121s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-None-True] PASSED [ 24%] 1121s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-weights1-False] PASSED [ 24%] 1121s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-weights1-True] PASSED [ 24%] 1122s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-None-False] PASSED [ 24%] 1122s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-None-True] PASSED [ 24%] 1122s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-weights1-False] PASSED [ 24%] 1123s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-weights1-True] PASSED [ 24%] 1123s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[-group-False] PASSED [ 24%] 1123s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[-group-True] PASSED [ 24%] 1123s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[resids-residues-False] PASSED [ 24%] 1124s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[resids-residues-True] PASSED [ 24%] 1124s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[segids-segments-False] PASSED [ 24%] 1124s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[segids-segments-True] PASSED [ 24%] 1124s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[molnums-molecules-False] PASSED [ 24%] 1125s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[molnums-molecules-True] PASSED [ 24%] 1126s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[fragindices-fragments-False] PASSED [ 24%] 1127s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[fragindices-fragments-True] PASSED [ 24%] 1127s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_coordinates PASSED [ 24%] 1127s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_principal_axes PASSED [ 24%] 1127s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_principal_axes_duplicates PASSED [ 24%] 1127s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_moment_of_inertia_duplicates PASSED [ 24%] 1127s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_radius_of_gyration_duplicates PASSED [ 24%] 1127s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_indices_ndarray PASSED [ 24%] 1128s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_indices PASSED [ 24%] 1128s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resids_ndarray PASSED [ 24%] 1128s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resids PASSED [ 24%] 1128s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnums_ndarray PASSED [ 24%] 1128s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnums PASSED [ 24%] 1128s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnames_ndarray PASSED [ 24%] 1128s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnames PASSED [ 24%] 1128s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_names_ndarray PASSED [ 24%] 1128s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_names PASSED [ 24%] 1129s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_segids_ndarray PASSED [ 24%] 1129s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_segids PASSED [ 24%] 1129s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_masses_ndarray PASSED [ 24%] 1129s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_masses PASSED [ 24%] 1129s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_charges_ndarray PASSED [ 24%] 1129s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_charges PASSED [ 24%] 1129s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bad_add_AG PASSED [ 24%] 1129s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bool_false PASSED [ 24%] 1129s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bool_true PASSED [ 24%] 1129s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_repr PASSED [ 24%] 1130s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_set_resnum_single PASSED [ 24%] 1130s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_set_resname_single PASSED [ 24%] 1130s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_packintobox_badshape PASSED [ 24%] 1130s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_packintobox_noshape PASSED [ 24%] 1130s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_packintobox PASSED [ 24%] 1130s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_residues PASSED [ 24%] 1130s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_integer PASSED [ 24%] 1130s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_slice PASSED [ 24%] 1130s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_slice_empty PASSED [ 24%] 1131s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_advancedslice PASSED [ 24%] 1131s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_2d_indexing_caught PASSED [ 24%] 1131s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_boolean_indexing_2[sel0] PASSED [ 24%] 1131s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_boolean_indexing_2[sel1] PASSED [ 24%] 1131s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bool_IE PASSED [ 24%] 1131s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_dihedral_ValueError PASSED [ 24%] 1131s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_improper PASSED [ 24%] 1131s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_dihedral_equals_improper PASSED [ 24%] 1131s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bond PASSED [ 24%] 1131s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bond_pbc PASSED [ 24%] 1132s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bond_ValueError PASSED [ 24%] 1132s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_angle PASSED [ 24%] 1132s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_angle_ValueError PASSED [ 24%] 1132s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_shape_parameter PASSED [ 24%] 1132s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_shape_parameter_duplicates PASSED [ 24%] 1132s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_asphericity PASSED [ 24%] 1132s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_asphericity_duplicates PASSED [ 24%] 1132s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_positions PASSED [ 24%] 1132s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_set_names PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_atom_order PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTimestep::test_partial_timestep PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[ix] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[ids] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[resids] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[segids] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[charges] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[masses] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[tempfactors] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_bonds PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_positions_2D PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_position_no_keyfunc PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_position PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupPickle::test_atomgroup_pickle[name CA] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupPickle::test_atomgroup_pickle[segid 4AKE] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_segid PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ACE] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ALA] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ALAD] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ARG] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ARGN] PASSED [ 24%] 1133s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASF] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASH] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASN] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASN1] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASP] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASPH] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CALA] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CARG] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CASF] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CASN] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CASP] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CCYS] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CCYX] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CGLN] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CGLU] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CGLY] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CHID] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CHIE] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CHIP] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CILE] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CLEU] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CLYS] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CME] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CMET] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CPHE] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CPRO] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CSER] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CTHR] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CTRP] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CTYR] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CVAL] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYM] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYS] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYS1] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYS2] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYSH] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYX] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[DAB] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLH] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLN] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLU] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLUH] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLY] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HID] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIE] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIP] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIS] PASSED [ 24%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIS1] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIS2] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISA] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISB] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISD] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISE] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISH] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HSD] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HSE] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HSP] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HYP] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ILE] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LEU] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LYN] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LYS] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LYSH] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[MET] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[MSE] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NALA] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NARG] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NASN] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NASP] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NCYS] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NCYX] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NGLN] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NGLU] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NGLY] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NHID] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NHIE] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NHIP] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NILE] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NLEU] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NLYS] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NME] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NMET] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NPHE] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NPRO] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NSER] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NTHR] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NTRP] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NTYR] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NVAL] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ORN] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[PGLU] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[PHE] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[PRO] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[QLN] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[SER] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[THR] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[TRP] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[TYR] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[VAL] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_backbone PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resid_single PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resid_range PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_selgroup PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_fullselgroup PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resnum_single PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resnum_range PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resname PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_name PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_atom PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_atom_empty PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_type PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_and PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_or PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_not PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_around[around 4.0 bynum 1943] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_around[around 4.0 index 1942] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphlayer[sphlayer 4.0 6.0 bynum 1281] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphlayer[sphlayer 4.0 6.0 index 1280] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_isolayer[isolayer 4.0 6.0 bynum 1281] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_isolayer[isolayer 4.0 6.0 index 1280] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphzone[sphzone 6.0 bynum 1281] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphzone[sphzone 6.0 index 1280] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cylayer[cylayer 4.0 6.0 10 -10 bynum 1281] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cylayer[cylayer 4.0 6.0 10 -10 index 1280] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_cylayer PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cyzone[cyzone 6.0 10 -10 bynum 1281] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cyzone[cyzone 6.0 10 -10 index 1280] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_cyzone PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_point PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_prop PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_bynum PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_index PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_byres[byres bynum 0:5-19] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_byres[byres index 0:19-43] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_same_resname PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_same_segment PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_same PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_selection PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_parenthesized_expression PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_no_space_around_parentheses PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_concatenated_selection PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_global PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname TYR THR-resname T*R] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname ASN GLN-resname *N] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname ASN ASP-resname AS*] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname TYR THR-resname T?R] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname ASN ASP HSD-resname *S?] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname LEU LYS-resname L**] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname MET-resname *M*] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname GLN GLY-resname GL[NY]] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname GLU-resname GL[!NY]] PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsAMBER::test_protein PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsAMBER::test_backbone PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsAMBER::test_type PASSED [ 25%] 1134s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNAMD::test_protein PASSED [ 25%] 1135s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNAMD::test_resid_single PASSED [ 25%] 1135s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNAMD::test_type PASSED [ 25%] 1135s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_protein PASSED [ 25%] 1135s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_backbone PASSED [ 25%] 1136s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_resid_single PASSED [ 25%] 1136s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as bynum 1 or bynum 10] PASSED [ 25%] 1137s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as bynum 1 10] PASSED [ 25%] 1137s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as index 0 or index 9] PASSED [ 25%] 1138s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as index 0 9] PASSED [ 25%] 1138s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cylayer[cylayer 10 20 20 -20 bynum 3554] PASSED [ 25%] 1139s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cylayer[cylayer 10 20 20 -20 index 3553] PASSED [ 25%] 1139s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cyzone[cyzone 20 20 -20 bynum 3554] PASSED [ 25%] 1140s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cyzone[cyzone 20 20 -20 index 3553] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_same_fragment[same fragment as bynum 1] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_same_fragment[same fragment as index 0] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_moltype PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_molnum[molnum 1-reference0] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_molnum[molnum 2:4-reference1] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[aromatic-5] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[not aromatic-1] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[type N and aromatic-1] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[type C and aromatic-4] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts n-indices0] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [#7]-indices1] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts a-indices2] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts c-indices3] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [*-]-indices4] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [$([!#1]);$([!R][R])]-indices5] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [$([C@H](-[CH2])(-[O-])-C=O)]-indices6] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [$([C@@H](-[CH2])(-[O-])-C=O)]-indices7] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts a and type C-indices8] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[(smarts a) and (type C)-indices9] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts a and type N-indices10] SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_invalid_smarts_sel_raises_error SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_passing_rdkit_kwargs_to_converter SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_passing_max_matches_to_converter SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_passing_use_chirality_to_converter SKIPPED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleic PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleic_all PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleicbackbone PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleicbase PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleicsugar PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_around[True] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_around[False] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_layer[True] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_layer[False] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_isolayer[True] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_isolayer[False] PASSED [ 25%] 1141s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_zone[True] PASSED [ 25%] 1142s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_zone[False] PASSED [ 25%] 1142s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_point[True] PASSED [ 25%] 1142s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_point[False] PASSED [ 25%] 1142s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_cyzone[distmat-True] PASSED [ 25%] 1142s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_cyzone[distmat-False] PASSED [ 25%] 1142s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_sphzone[True-33] PASSED [ 25%] 1142s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_sphzone[False-25] PASSED [ 25%] 1143s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_around[True] PASSED [ 25%] 1143s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_around[False] PASSED [ 25%] 1144s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_layer[True] PASSED [ 25%] 1144s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_layer[False] PASSED [ 25%] 1145s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_isolayer[True] PASSED [ 25%] 1145s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_isolayer[False] PASSED [ 25%] 1146s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_zone[True] PASSED [ 25%] 1146s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_zone[False] PASSED [ 25%] 1147s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_point[True] PASSED [ 25%] 1147s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_point[False] PASSED [ 25%] 1148s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_around PASSED [ 25%] 1148s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_sphlayer PASSED [ 25%] 1149s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_empty_sphlayer PASSED [ 25%] 1149s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_empty_isolayer PASSED [ 25%] 1150s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_sphzone PASSED [ 25%] 1150s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_empty_sphzone PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_point_1 PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_point_2 PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass < 1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass <1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass< 1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass<1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge < 1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge <1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge< 1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge<1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass < 1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass <1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass< 1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass<1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge < 1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge <1.5] PASSED [ 25%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge< 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge<1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass <= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass <=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass<= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass<=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge <= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge <=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge<= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge<=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass <= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass <=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass<= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass<=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge <= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge <=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge<= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge<=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass > 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass >1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass> 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass>1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge > 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge >1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge> 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge>1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass > 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass >1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass> 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass>1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge > 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge >1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge> 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge>1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass >= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass >=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass>= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass>=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge >= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge >=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge>= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge>=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass >= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass >=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass>= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass>=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge >= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge >=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge>= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge>=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass == 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass ==1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass== 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass==1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge == 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge ==1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge== 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge==1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass == 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass ==1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass== 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass==1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge == 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge ==1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge== 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge==1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass != 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass !=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass!= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass!=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge != 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge !=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge!= 1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge!=1.5] PASSED [ 26%] 1151s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass != 1.5] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass !=1.5] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass!= 1.5] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass!=1.5] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge != 1.5] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge !=1.5] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge!= 1.5] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge!=1.5] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-<] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass->] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-<=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass->=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-==] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-!=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-<] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge->] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-<=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge->=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-==] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-!=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-<] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass->] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-<=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass->=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-==] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-!=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-<] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge->] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-<=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge->=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-==] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-!=] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestBondedSelection::test_bonded_1 PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestBondedSelection::test_nobonds_warns PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[name and H] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[name )] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resid abcd] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resnum 7a7] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resid 1-] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop chicken == tasty] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop chicken <= 7.4] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop mass ^^ 12.0] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[same this as resid 1] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[same resid resname mass 5.0] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[name H and] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[naem H] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resid and name C] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resnum ] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[bynum or protein] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[index or protein] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop mass < 4.0 hello] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop mass > 10. and group this] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass 1.0 to] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass to 3.0] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass 1.0:] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass :3.0] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass 1-] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[chirality ] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[formalcharge 0.2] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_invalid_prop_selection PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_segid_and_resid PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[name NameABA or name NameACA or name NameADA-name NameABA NameACA NameADA] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[type TypeE or type TypeD or type TypeB-type TypeE TypeD TypeB] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[resname RsC or resname RsY-resname RsC RsY] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[name NameAB* or name NameACC-name NameAB* NameACC] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[segid SegA or segid SegC-segid SegA SegC] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[(name NameABC or name NameABB) and (resname RsD or resname RsF)-name NameABC NameABB and resname RsD RsF] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-resid] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-resnum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-bynum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-index] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-resid] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-resnum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-bynum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-index] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-resid] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-resnum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-bynum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-index] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-resid] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-resnum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-bynum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-index] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-resid] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-resnum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-bynum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-index] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-resid] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-resnum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-bynum] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-index] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_resid_implicit_icode PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_1 PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_2 PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_3 PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_4 PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_5 PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_missing_icodes_VE PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_missing_icodes_range_VE PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_similarity_selection_icodes[same residue as -11] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_similarity_selection_icodes[same resid as-72] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_similarity_selection_icodes[byres-11] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[all] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[protein] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[backbone] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[nucleic] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[nucleicbackbone] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[name O] PASSED [ 26%] 1152s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[name N*] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resname stuff] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resname ALA] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[type O] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[index 0] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[index 1] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[bynum 1-10] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[segid SYSTEM] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resid 163] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resid 1-10] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resnum 2] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[around 10 resid 1] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[point 0 0 0 10] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[sphzone 10 resid 1] PASSED [ 26%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[sphlayer 0 10 index 1] PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[cyzone 15 4 -8 index 0] PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[cylayer 5 10 10 -8 index 1] PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[prop abs z <= 100] PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[byres index 0] PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[same resid as index 0] PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_empty_yet_global PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_arbitrary_atom_group_raises_error PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_empty_sel PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_record_type_sel PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_element_sel PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chain_sel PASSED [ 27%] 1153s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.8 to 1.2-23844-selkwargs0] PASSED [ 27%] 1154s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 8e-1 to 1200e-3-23844-selkwargs1] PASSED [ 27%] 1155s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5--3-2-selkwargs2] PASSED [ 27%] 1155s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -3 : -5-0-selkwargs3] PASSED [ 27%] 1155s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5 --3-2-selkwargs4] PASSED [ 27%] 1156s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5- -3-2-selkwargs5] PASSED [ 27%] 1156s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5 - -3-2-selkwargs6] PASSED [ 27%] 1157s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10:3-34945-selkwargs7] PASSED [ 27%] 1157s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10 :3-34945-selkwargs8] PASSED [ 27%] 1157s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10: 3-34945-selkwargs9] PASSED [ 27%] 1158s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10 : 3-34945-selkwargs10] PASSED [ 27%] 1158s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10 -3-0-selkwargs11] PASSED [ 27%] 1158s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3-5-selkwargs12] PASSED [ 27%] 1159s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3-5-selkwargs13] PASSED [ 27%] 1159s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3 - 0.30000000000000004-10-selkwargs14] PASSED [ 27%] 1159s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.30000000000000004-5-selkwargs15] PASSED [ 27%] 1160s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3 0.30000000000000001-5-selkwargs16] PASSED [ 27%] 1161s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3-10-selkwargs17] PASSED [ 27%] 1161s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.30000000000000004-10-selkwargs18] PASSED [ 27%] 1161s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3 0.30000000000000001-10-selkwargs19] PASSED [ 27%] 1162s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[prop mass == 0.3-10-selkwargs20] PASSED [ 27%] 1163s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[prop mass == 0.30000000000000004-10-selkwargs21] PASSED [ 27%] 1163s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[prop mass == 0.30000000000000004-5-selkwargs22] PASSED [ 27%] 1163s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel_warning PASSED [ 27%] 1163s testsuite/MDAnalysisTests/core/test_atomselections.py::test_int_sel[resnum -10 to 3-13] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_int_sel[resnum -5--3-3] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_int_sel[resnum -3 : -5-0] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_negative_resid PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[aromaticity-5] SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[aromaticity true-5] SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[not aromaticity-15] SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[aromaticity False-15] SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel_error SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_error_selection_for_strange_dtype PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_default_selection_on_ordered_unique_group[name N-ix0] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_default_selection_on_ordered_unique_group[resname GLU-ix1] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[name N-True-ix0] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[name N-False-ix1] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[resname GLU-True-ix2] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[resname GLU-False-ix3] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[name N-True-ix0] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[name N-False-ix1] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[resname GLU-True-ix2] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[resname GLU-False-ix3] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality[C[C@@H](C(=O)O)N-S] SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality[C[C@H](C(=O)O)N-R] SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[R-1] SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[S-1] SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[R S-2] SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[S R-2] SKIPPED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[1-1-NH2] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[-1-1-OD2] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[0-34-N] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[-1 1-2-OD2] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_size PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_size_independent PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[_AR] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[RA] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[_RS] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[SR] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[_AR] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[RA] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[_RS] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[SR] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_move_atom PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_move_residue PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA0] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA1] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA2] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA3] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA4] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA5] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA6] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA7] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA8] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA9] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA10] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA11] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA12] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA13] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA14] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA15] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA16] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA17] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA18] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA19] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA20] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_n_attrs PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[names] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[masses] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[resids] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[bonds] PASSED [ 27%] 1164s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[tt] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_universe_copy PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_positions PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_change_positions PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_topology PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_change_topology PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_copying.py::test_pdb_copy PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_total_frags[u0] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_total_frags[u1] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_external_ordering[u0] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_external_ordering[u1] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_internal_ordering[u0] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_internal_ordering[u1] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atom_access[u0] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atom_access[u1] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_access[u0] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_access[u1] PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_empty_atomgroup_access PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_fragments_nobonds_NDE PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atom_fragment_nobonds_NDE PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_fragment_cache_invalidation_bond_making PASSED [ 27%] 1165s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_fragment_cache_invalidation_bond_breaking PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_fragments.py::test_tpr_fragments PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-False-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-True-False] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-False-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-True-True] PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_force_get PASSED [ 27%] 1167s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_velocity_get PASSED [ 27%] 1168s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_force_set PASSED [ 27%] 1168s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_velocity_set PASSED [ 27%] 1168s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_pos_iteration PASSED [ 27%] 1168s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_vel_iteration PASSED [ 27%] 1169s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_for_iteration PASSED [ 27%] 1169s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestGROVelocities::testParse_velocities PASSED [ 27%] 1169s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestTRRForces::testForces PASSED [ 27%] 1169s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestTRRForcesNativeUnits::testForces PASSED [ 27%] 1169s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupVelocities::test_get_velocities PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupVelocities::test_velocities PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupVelocities::test_set_velocities PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupForces::test_get_forces PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupForces::test_forces PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupForces::test_set_forces PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_dimensions PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_isunique[group0] PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_isunique[group1] PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_isunique[group2] PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_nocache[group0] PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_nocache[group1] PASSED [ 27%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_nocache[group2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_create_unique_group_from_unique[group0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_create_unique_group_from_unique[group1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_create_unique_group_from_unique[group2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix0-unique_ix0-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix0-unique_ix0-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix0-unique_ix0-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix1-unique_ix1-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix1-unique_ix1-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix1-unique_ix1-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix0-False-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix0-False-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix0-False-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix1-True-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix1-True-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix1-True-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix2-True-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix2-True-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix2-True-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix0-True-unique_ix0-True-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix0-True-unique_ix0-True-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix0-True-unique_ix0-True-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix1-False-unique_ix1-True-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix1-False-unique_ix1-True-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix1-False-unique_ix1-True-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix2-True-unique_ix2-False-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix2-True-unique_ix2-False-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix2-True-unique_ix2-False-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix3-False-unique_ix3-True-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix3-False-unique_ix3-True-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix3-False-unique_ix3-True-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix4-True-unique_ix4-False-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix4-True-unique_ix4-False-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix4-True-unique_ix4-False-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix5-False-unique_ix5-False-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix5-False-unique_ix5-False-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix5-False-unique_ix5-False-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix6-True-unique_ix6-False-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix6-True-unique_ix6-False-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix6-True-unique_ix6-False-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix7-False-unique_ix7-False-ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix7-False-unique_ix7-False-ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix7-False-unique_ix7-False-ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_sorted_unsorted_unique[ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_sorted_unsorted_unique[ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_sorted_unsorted_unique[ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_unsorted_sorted_unique[ugroup0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_unsorted_sorted_unique[ugroup1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_unsorted_sorted_unique[ugroup2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestEmptyAtomGroup::test_passive_decorator[ag0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestEmptyAtomGroup::test_error_empty_group[ag0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_atoms[atom] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_atoms[residue] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_atoms[segment] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_residues[atom] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_residues[residue] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_residues[segment] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_segments[atom] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_segments[residue] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_segments[segment] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_len[atom] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_len[residue] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_len[segment] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[atom-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[atom-array] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[residue-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[residue-array] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[segment-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[segment-array] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_indexerror[atom] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_indexerror[residue] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_indexerror[segment] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl0-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl1-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl2-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl3-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl4-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl5-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl6-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl7-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl8-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl9-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl10-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl11-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl12-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl13-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl0-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl1-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl2-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl3-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl4-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl5-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl6-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl7-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl8-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl9-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl10-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl11-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl12-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl13-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl0-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl1-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl2-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl3-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl4-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl5-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl6-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl7-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl8-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl9-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl10-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl11-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl12-list] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl13-] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom-0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom-1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom--1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom--2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue-0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue-1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue--1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue--2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment-0] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment-1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment--1] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment--2] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_none_getitem[atom] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_none_getitem[residue] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_none_getitem[segment] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a0-b0-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a1-b1-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a2-b2-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a3-b3-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a4-b4-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a5-b5-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a6-b6-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a7-b7-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a8-b8-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a9-b9-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a10-b10-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a11-b11-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a0-b0-c0-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a1-b1-c1-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a2-b2-c2-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a3-b3-c3-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a4-b4-c4-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a5-b5-c5-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a6-b6-c6-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a7-b7-c7-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a8-b8-c8-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a9-b9-c9-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a10-b10-c10-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a11-b11-c11-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a12-b12-c12-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a13-b13-c13-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a14-b14-c14-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a15-b15-c15-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a16-b16-c16-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a17-b17-c17-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a18-b18-c18-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a19-b19-c19-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a20-b20-c20-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a21-b21-c21-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a22-b22-c22-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a23-b23-c23-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a0-b0-c0-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a1-b1-c1-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a2-b2-c2-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a3-b3-c3-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a4-b4-c4-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a5-b5-c5-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a6-b6-c6-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a7-b7-c7-AtomGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a8-b8-c8-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a9-b9-c9-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a10-b10-c10-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a11-b11-c11-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a12-b12-c12-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a13-b13-c13-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a14-b14-c14-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a15-b15-c15-ResidueGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a16-b16-c16-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a17-b17-c17-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a18-b18-c18-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a19-b19-c19-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a20-b20-c20-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a21-b21-c21-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a22-b22-c22-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a23-b23-c23-SegmentGroup] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains[atom] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains[residue] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains[segment] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_false[atom] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_false[residue] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_false[segment] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[atom-residue] PASSED [ 28%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[atom-segment] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[residue-atom] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[residue-segment] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[segment-atom] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[segment-residue] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a0-b0] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a1-b1] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a2-b2] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a3-b3] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a4-b4] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a5-b5] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a6-b6] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a7-b7] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a8-b8] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a9-b9] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a10-b10] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a11-b11] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a12-b12] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a13-b13] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a14-b14] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a15-b15] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a16-b16] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a17-b17] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a18-b18] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a19-b19] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a20-b20] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a21-b21] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a22-b22] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a23-b23] PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_atomgroup PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_residuegroup PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_segmentgroup PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_atomgroup PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_residuegroup PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_segmentgroup PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_atomgroup PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_residuegroup PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_segmentgroup PASSED [ 29%] 1170s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atom_to_residue PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atom_to_segment PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residue_to_atomgroup PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residue_to_segment PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segment_to_atomgroup PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segment_to_residuegroup PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_residuegroup_unique PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_segmentgroup_unique PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_segmentgroup_unique PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_atomgroup_listcomp PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_residuegroup_listcomp PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_atomgroup_listcomp PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_lt[abc0] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_lt[abc1] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_lt[abc2] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_gt[abc0] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_gt[abc1] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_gt[abc2] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_ge[abc0] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_ge[abc1] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_ge[abc2] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_le[abc0] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_le[abc1] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_le[abc2] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_neq[abc0] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_neq[abc1] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_neq[abc2] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_eq[abc0] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_eq[abc1] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_eq[abc2] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_sorting[abc0] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_sorting[abc1] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_sorting[abc2] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x0-y0] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x1-y1] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x2-y2] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x3-y3] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x4-y4] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x5-y5] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x0-y0] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x1-y1] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x2-y2] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x3-y3] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x4-y4] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x5-y5] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestMetaclassMagic::test_new_class PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_float PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string[segids0] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string[segids1] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string[segids2] PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_int PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_float_string PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_int_float PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string_int PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atom_repr PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residue_repr PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_segment_repr PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atomgroup_repr PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atomgroup_str_short PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atomgroup_str_long PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residuegroup_repr PASSED [ 29%] 1171s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residuegroup_str_short PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residuegroup_str_long PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_segmentgroup_repr PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_segmentgroup_str PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len[atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len[residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len[segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len_duplicated_and_scrambled[atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len_duplicated_and_scrambled[residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len_duplicated_and_scrambled[segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_copy[group0] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_copy[group1] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_copy[group2] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[simple-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[simple-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[simple-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[scrambled-atoms] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[scrambled-residues] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[scrambled-segments] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left0-right0] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left1-right1] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left2-right2] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left3-right3] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left4-right4] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left5-right5] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left6-right6] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left7-right7] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left8-right8] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left9-right9] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left10-right10] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left11-right11] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left12-right12] PASSED [ 29%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left13-right13] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left14-right14] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left15-right15] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left16-right16] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left17-right17] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left18-right18] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left19-right19] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left20-right20] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left21-right21] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left22-right22] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left23-right23] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left24-invalid] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left0-right0] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left1-right1] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left2-right2] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left3-right3] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left4-right4] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left5-right5] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left6-right6] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left7-right7] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left8-right8] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left9-right9] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left10-right10] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left11-right11] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_only_same_level_different_universes PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-add-concatenate] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-sub-difference] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-and_-intersection] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-or_-union] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-xor-symmetric_difference] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-add-concatenate] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-sub-difference] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-and_-intersection] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-or_-union] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-xor-symmetric_difference] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-add-concatenate] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-sub-difference] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-and_-intersection] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-or_-union] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-xor-symmetric_difference] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_exists[atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_exists[residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_exists[segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_equality[atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_equality[residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_equality[segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference[atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference[residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference[segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[atoms-residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[atoms-segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[residues-atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[residues-segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[segments-atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[segments-residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_diff_cross_universe[atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_diff_cross_universe[residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_diff_cross_universe[segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAtomGroup::test_PDB_atom_repr PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_group_fail[atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_group_fail[residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_group_fail[segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_component_fails[atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_component_fails[residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_component_fails[segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[atoms-name] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[atoms-resid] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[atoms-segid] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[residues-name] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[residues-resid] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[residues-segid] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[segments-name] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[segments-resid] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[segments-segid] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_atom_set_name PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_atom_set_resid PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_atom_set_segid PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_residue_set_name PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_residue_set_resid PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_residue_set_segid PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_segment_set_name PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_segment_set_resid PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_segment_set_segid PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[atoms-names] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[atoms-resids] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[atoms-segids] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[residues-names] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[residues-resids] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[residues-segids] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[segments-names] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[segments-resids] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[segments-segids] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_group[masses] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_group[altLocs] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_component[mass] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_component[altLoc] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_plural_topattr_from_component[masses-mass] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_plural_topattr_from_component[altLocs-altLoc] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_sing_topattr_from_group[masses-mass] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_sing_topattr_from_group[altLocs-altLoc] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_topattr_group[elements-element] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_topattr_group[tempfactors-tempfactor] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_topattr_group[bonds-bonds] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_non_topattr PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_unwrap_without_bonds PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_attr_method PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_attrprop PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_attrprop_wrong_group PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_attrmethod_wrong_group PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_wrong_name[altlocs] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_wrong_name[alt_Locs] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_object_init[atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_object_init[residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_object_init[segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_number_init[atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_number_init[residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_number_init[segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni[atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni[residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni[segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni_2[atoms] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni_2[residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni_2[segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-fragments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-molecules] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-group] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-fragments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-molecules] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-group] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-fragments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-molecules] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-group] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-fragments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-molecules] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-group] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-fragments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-molecules] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-group] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-fragments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-molecules] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-group] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-fragments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-molecules] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-group] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-segments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-fragments] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-molecules] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-residues] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-group] PASSED [ 30%] 1172s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-segments] PASSED [ 30%] 1173s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[bonds] PASSED [ 30%] 1175s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[angles] PASSED [ 30%] 1175s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[dihedrals] PASSED [ 30%] 1175s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[impropers] PASSED [ 30%] 1175s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_outside[bonds-1] PASSED [ 30%] 1176s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_outside[angles-3] PASSED [ 30%] 1176s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_outside[dihedrals-4] PASSED [ 30%] 1177s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_not_outside[bonds-9] PASSED [ 30%] 1178s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_not_outside[angles-15] PASSED [ 30%] 1178s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_not_outside[dihedrals-12] PASSED [ 30%] 1178s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_outside[bonds-13] PASSED [ 30%] 1179s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_outside[angles-27] PASSED [ 30%] 1179s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_outside[dihedrals-38] PASSED [ 30%] 1180s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_invalid_connection_error PASSED [ 30%] 1181s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_get_empty_group[True] PASSED [ 30%] 1181s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_get_empty_group[False] PASSED [ 30%] 1182s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[bonds-9] PASSED [ 30%] 1182s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[angles-14] PASSED [ 30%] 1183s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[dihedrals-9] PASSED [ 30%] 1183s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[impropers-0] PASSED [ 30%] 1184s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[bonds-11] PASSED [ 30%] 1184s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[angles-22] PASSED [ 30%] 1185s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[dihedrals-27] PASSED [ 30%] 1186s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[impropers-0] PASSED [ 30%] 1186s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_not_outside[bonds-157] PASSED [ 30%] 1187s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_not_outside[angles-290] PASSED [ 30%] 1187s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_not_outside[dihedrals-351] PASSED [ 30%] 1187s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_outside[bonds-158] PASSED [ 30%] 1188s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_outside[angles-294] PASSED [ 30%] 1189s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_outside[dihedrals-360] PASSED [ 30%] 1189s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_invalid_connection_error PASSED [ 30%] 1190s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_get_empty_group[True] PASSED [ 30%] 1190s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_get_empty_group[False] PASSED [ 30%] 1191s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_inside[intra_bonds-9] PASSED [ 30%] 1191s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_inside[intra_angles-15] PASSED [ 31%] 1192s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_inside[intra_dihedrals-12] PASSED [ 31%] 1192s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_outside[bonds-13] PASSED [ 31%] 1192s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_outside[angles-27] PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_outside[dihedrals-38] PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_ag_ix PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_rg_ix PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_sg_ix PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atom_ix_array PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residue_ix_array PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segment_ix_array PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atomgroup_indices PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atomgroup_residue_upshift PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atomgroup_segment_upshift PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residuegroup_atom_downshift PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residuegroup_resindices PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residuegroup_segment_upshift PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segmentgroup_atom_downshift PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segmentgroup_residue_downshift PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segmentgroup_segindices PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_requires_failure_singular PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_requires_failure_multiple PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_requires_success PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_failure_errormessage PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_residue.py::test_type PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_residue.py::test_index PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_residue.py::test_atom_order PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_residue.py::test_residue_pickle PASSED [ 31%] 1193s testsuite/MDAnalysisTests/core/test_residuegroup.py::test_sequence_import_error SKIPPED [ 31%] 1194s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_string PASSED [ 31%] 1194s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_SeqRecord PASSED [ 31%] 1194s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_SeqRecord_default PASSED [ 31%] 1194s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_Seq PASSED [ 31%] 1194s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_nonIUPACresname_VE PASSED [ 31%] 1194s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_format_TE PASSED [ 31%] 1194s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_newResidueGroup PASSED [ 31%] 1194s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_n_atoms PASSED [ 31%] 1194s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_n_residues PASSED [ 31%] 1194s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_resids_dim PASSED [ 31%] 1195s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_resnums_dim PASSED [ 31%] 1195s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_segids_dim PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_len PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resids PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resids_updates_self PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resnum_single PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resnum_many PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resnum_ValueError PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resname_single SKIPPED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resname_many SKIPPED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resname_ValueError SKIPPED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_merge_residues SKIPPED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_masses SKIPPED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_atom_order PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_get_next_residue PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_get_prev_residue PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_residuegroup_pickle[name CA] PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_residuegroup_pickle[segid 4AKE] PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_type PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_index PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_slicing PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_advanced_slicing PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_atom_order PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_residue_pickle[1] PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_residue_pickle[-1] PASSED [ 31%] 1196s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_newSegmentGroup PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_n_atoms PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_n_residues PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_resids_dim PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_resnums_dim PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_segids_dim PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_set_segids PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_set_segid_updates_ PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_set_segids_many PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_atom_order PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_segmentgroup_pickle PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_a2r PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_r2a_1d PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_r2a_2d PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_r2s PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2r_1d PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2r_2d PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2a_1d PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2a_2d PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_move_atom_simple PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_move_residue_simple PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_lazy_building_RA PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_lazy_building_SR PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_serialization PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_single_residue PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residuegroup PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residue_list PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_residuegroup_TE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_residue_list_TE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residuegroup_VE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residue_list_VE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_TE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_TE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_list_TE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_segment_NIE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_segment_NIE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_single_segment PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_segmentgroup PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_segment_list PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue_segmentgroup_TE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue_list_TE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_segmentgroup_VE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_list_VE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue_TE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_TE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_list_TE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_downshift_dtype_square PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_downshift_dtype_ragged PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_shape_square PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_shape_ragged PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_contents_square PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_contents_ragged PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_intra_values PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_intra_values_2 PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_end_values PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_end_values_2 PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_start_values_2 PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_segment_no_attrs PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_residue_no_attrs PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_residue_no_attrs_one_segment PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_ambiguous_segment_NDE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_missing_attr_NDE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_NDE_message PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_NDE_message_2 PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_with_attrs PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_missing_attr_NDE_Segment PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Segment_NDE_message PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Segment_with_attr PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyGuessed::test_guessed PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyGuessed::test_read PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyCreation::test_make_topology_no_attrs PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyCreation::test_resindex_VE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyCreation::test_segindex_VE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_len PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atom_VE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_get_atoms PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atoms_singular PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atoms_plural PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atoms_VE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_get_residues PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_get_segments PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_len PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atom_VE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_get_atoms PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atoms_singular PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atoms_plural PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atoms_VE PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_get_residues PASSED [ 31%] 1197s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_get_segments PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestIndicesClasses::test_cant_set_atom_indices PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestIndicesClasses::test_cant_set_residue_indices PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestIndicesClasses::test_cant_set_segment_indices PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_len PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atom_VE PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_get_atoms PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atoms_singular PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atoms_plural PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atoms_VE PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_get_residues PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_get_segments PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_prev_emptyresidue PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_next_emptyresidue PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_missing_values PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_missing_value_label PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_len PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atom_VE PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_atoms PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atoms_singular PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atoms_plural PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atoms_VE PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_residues PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_segments PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_segment PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_missing_masses PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_len PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atom_VE PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_atoms PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atoms_singular PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atoms_plural PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atoms_VE PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_residues PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_segments PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_segment PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_len PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residue_VE PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_atoms PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_atom PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_residues PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residues_singular PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residues_plural PASSED [ 31%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residues_VE PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_segments PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_len PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residue_VE PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_atoms PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_atom PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_residues PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residues_singular PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residues_plural PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residues_VE PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_segments PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_len PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residue_VE PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_atoms PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_atom PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_residues PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residues_singular PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residues_plural PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residues_VE PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_segments PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_len PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residue_VE PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_atoms PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_atom PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_residues PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues_singular PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues_plural PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues_VE PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_segments PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_atoms XFAIL [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_len PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segment_VE PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_get_atoms PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_get_residues PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_get_segments PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segments_singular PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segments_plural PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segments_VE PASSED [ 32%] 1198s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_principal_axes PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_principal_axes_handedness PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_align_principal_axes_with_self PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_align_principal_axes_with_x PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[0-names-0-level0] PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[0-names-1-level1] PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[0-names-2-level2] PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[1-resids-0-level0] PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[1-resids-1-level1] PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[1-resids-2-level2] PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[2-segids-0-level0] PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[2-segids-1-level1] PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[2-segids-2-level2] PASSED [ 32%] 1199s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_record_types_default PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_encoding PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_residue_record_types PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_segment_record_types PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_static_typing PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_static_typing_from_empty PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[atoms-center_of_mass] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[atoms-center_of_charge] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[atoms-total_charge] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[residues-total_charge] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_property[universe-models] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_property[atoms-n_fragments] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_warn_selection_for_strange_dtype PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_get_group PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_get_atom PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_set_group PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_set_atom PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactor_sel PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_residue[ResA] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_residue[ResB] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_segment[SegA] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_segment[SegB] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_issue3437 PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[group] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[segments] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[residues] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[molecules] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[fragments] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[group] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[segments] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[residues] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[molecules] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[fragments] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[group] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[segments] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[residues] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[molecules] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[fragments] PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_repr PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_eq PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ne PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_gt PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_lt PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_iter PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_len PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_hash PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_indices PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_partner PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_partner_VE PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_bondlength PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_bondrepr PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_angle PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_angle_repr PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_angle_180 PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_dihedral PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_dihedral_repr PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_improper PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_improper_repr PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_repr PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_repr_VE PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_partner PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_distance PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_cmap_repr PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_cmap_repr_VE PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_len PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_iter PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_keyerror PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_universe PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bonds_types PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bonds_contains PASSED [ 32%] 1200s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_uniqueness PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_reversal PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_no_reversal PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_types PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_contains PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_uniqueness PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_reversal PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_types PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_contains PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_uniqueness PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_reversal PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bad_creation PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bad_creation_TG PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_tg_creation_bad_btype PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_tg_creation_notype PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angle_tg_creation_notype PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedral_tg_creation_notype PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_create_guessed_tg PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_create_guessed_tg_2 PASSED [ 32%] 1201s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_equality PASSED [ 32%] 1202s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_create_TopologyGroup PASSED [ 32%] 1202s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[bonds] PASSED [ 32%] 1202s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[angles] PASSED [ 32%] 1202s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[dihedrals] PASSED [ 32%] 1202s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[impropers] PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_strict_intersection PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_TopologyGroups PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_empty_to_TG PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_TO_to_empty_TG PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_TG_to_empty_TG PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_singleitem PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_wrongtype_TopologyGroup PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bad_add_TopologyGroup PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_single PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_slice PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_fancy PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_bool PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_bool_IE PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom1 PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom2 PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom3_IE PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom3 PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom4_IE PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom4 PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_wrong_type_bonds PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_bonds PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_wrong_type_angles PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_angles PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_wrong_type_dihedrals PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_dihedrals PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_impropers PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_bond_length_pbc PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_cross_universe_eq PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_zero_size_TG_indices_bonds PASSED [ 32%] 1203s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_zero_size_TG_indices_angles PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_topology_stringio PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_trajectory_stringio PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_make_universe_stringio_no_format PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_no_trajectory_AE PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_unrecognizedformat_VE PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_unrecognizedformat_VE_msg PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_IE PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_IE_msg PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_filename_IE_msg PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_invalidfile_IE_msg PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_invalidpermissionfile_IE_msg PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_new_VE PASSED [ 32%] 1204s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_new_memory_reader_success PASSED [ 32%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_new_memory_reader_fails PASSED [ 32%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_universe_kwargs PASSED [ 32%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_universe_topology_class_with_coords PASSED [ 32%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_universe_empty_ROMol SKIPPED [ 32%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_default SKIPPED [ 32%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_from_bad_smiles SKIPPED [ 32%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_no_Hs SKIPPED [ 33%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_gencoords_without_Hs_error SKIPPED [ 33%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_generate_coordinates_numConfs SKIPPED [ 33%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_rdkit_kwargs SKIPPED [ 33%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_coordinates SKIPPED [ 33%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_bad_topology PASSED [ 33%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new PASSED [ 33%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new_returns_Universe PASSED [ 33%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new_None_returns_Universe PASSED [ 33%] 1205s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new_TypeError PASSED [ 33%] 1206s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_structure PASSED [ 33%] 1206s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_multiple_list PASSED [ 33%] 1206s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_multiple_args PASSED [ 33%] 1206s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_pickle PASSED [ 33%] 1206s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_set_dimensions[int] PASSED [ 33%] 1207s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_set_dimensions[float32] PASSED [ 33%] 1207s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_set_dimensions[float64] PASSED [ 33%] 1207s testsuite/MDAnalysisTests/core/test_universe.py::TestTransformations::test_callable PASSED [ 33%] 1207s testsuite/MDAnalysisTests/core/test_universe.py::TestTransformations::test_list PASSED [ 33%] 1207s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_automatic_type_and_mass_guessing PASSED [ 33%] 1207s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_no_type_and_mass_guessing PASSED [ 33%] 1207s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_invalid_context PASSED [ 33%] 1207s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_invalid_attributes PASSED [ 33%] 1207s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_guess_masses_before_types PASSED [ 33%] 1207s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_guessing_read_attributes PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessMasses::test_universe_loading_no_warning PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_no_vdwradii PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_with_vdwradii PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_off PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_arguments PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.55-0.1-2] PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.9-1.6-1] PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.5-0.2-2] PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.1-0.1-0] PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds_no_vdwradii PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds_with_vdwradii PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_guess_bonds_periodicity PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_guess_read_bonds PASSED [ 33%] 1208s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_w_timeseries PASSED [ 33%] 1209s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_wo_timeseries PASSED [ 33%] 1209s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_w_timeseries_frame_interval PASSED [ 33%] 1209s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_wo_timeseries_frame_interval PASSED [ 33%] 1209s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_existing_universe PASSED [ 33%] 1209s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_frame_interval_convention PASSED [ 33%] 1209s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_with_start_stop PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_without_start PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_without_stop PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_step_without_start_stop PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_step_with_start_stop PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_step_dt PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_negative_start PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_negative_stop PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_transfer_to_memory_kwargs PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_in_memory_kwargs PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_reader PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_reader_singleframe PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_reader_singleframe_2 PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_parser PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_both PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_TA_fail PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_nodefault_fail PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charge-charges-0.0_0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charges-charges-0.0_0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[name-names-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[names-names-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[type-types-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[types-types-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[element-elements-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[elements-elements-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[radius-radii-0.0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[radii-radii-0.0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[chainID-chainIDs-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[chainIDs-chainIDs-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[tempfactor-tempfactors-0.0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[tempfactors-tempfactors-0.0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[mass-masses-0.0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[masses-masses-0.0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charge-charges-0.0_1] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charges-charges-0.0_1] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[bfactor-bfactors-0.0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[bfactors-bfactors-0.0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[occupancy-occupancies-0.0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[occupancies-occupancies-0.0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[altLoc-altLocs-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[altLocs-altLocs-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resid-resids-1] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resids-resids-1] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resname-resnames-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resnames-resnames-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resnum-resnums-1] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resnums-resnums-1] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[icode-icodes-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[icodes-icodes-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[segid-segids-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[segids-segids-] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[bonds-values0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[bonds-values1] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[bonds-values2] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[angles-values3] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[dihedrals-values4] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[impropers-values5] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-values0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-values1] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-rubbish] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-values3] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[angles-values4] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[angles-rubbish] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[dihedrals-values6] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[impropers-values7] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_attr_length_error PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_TA_fail PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_absent_fail PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_wrongtype_fail PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_str[charge-charges] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_str[charges-charges] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_str[bonds-bonds] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_attr PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_transplants PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_attr_error PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_attr_from_ag PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_func_from_universe PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[bonds-values0] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[angles-values1] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[dihedrals-values2] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[impropers-values3] PASSED [ 33%] 1210s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_reversed_duplicates PASSED [ 33%] 1211s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[bonds-values0] PASSED [ 33%] 1211s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[angles-values1] PASSED [ 33%] 1211s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[dihedrals-values2] PASSED [ 33%] 1211s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[impropers-values3] PASSED [ 33%] 1211s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[bonds-values0] PASSED [ 33%] 1211s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[angles-values1] PASSED [ 33%] 1211s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[dihedrals-values2] PASSED [ 33%] 1211s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[impropers-values3] PASSED [ 33%] 1211s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[bonds-values0] PASSED [ 33%] 1212s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[angles-values1] PASSED [ 33%] 1212s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[dihedrals-values2] PASSED [ 33%] 1212s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[impropers-values3] PASSED [ 33%] 1212s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[bonds-values0] PASSED [ 33%] 1212s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[angles-values1] PASSED [ 33%] 1212s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[dihedrals-values2] PASSED [ 33%] 1212s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[impropers-values3] PASSED [ 33%] 1212s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[bonds-values0] PASSED [ 33%] 1213s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[angles-values1] PASSED [ 33%] 1213s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[dihedrals-values2] PASSED [ 33%] 1213s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[impropers-values3] PASSED [ 33%] 1213s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[bonds-values0] PASSED [ 33%] 1213s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[angles-values1] PASSED [ 33%] 1213s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[dihedrals-values2] PASSED [ 33%] 1213s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[impropers-values3] PASSED [ 33%] 1214s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[bonds-values0] PASSED [ 33%] 1214s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[angles-values1] PASSED [ 33%] 1214s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[dihedrals-values2] PASSED [ 33%] 1214s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[impropers-values3] PASSED [ 33%] 1214s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[bonds-values0] PASSED [ 33%] 1214s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[angles-values1] PASSED [ 33%] 1215s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[dihedrals-values2] PASSED [ 33%] 1215s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[impropers-values3] PASSED [ 33%] 1215s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[bonds-values0] PASSED [ 33%] 1215s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[angles-values1] PASSED [ 33%] 1215s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[dihedrals-values2] PASSED [ 33%] 1215s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[impropers-values3] PASSED [ 33%] 1215s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[impropers-values0] PASSED [ 33%] 1215s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[dihedrals-values1] PASSED [ 33%] 1215s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[angles-values2] PASSED [ 33%] 1215s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[bonds-values3] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[bonds-values0] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[angles-values1] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[dihedrals-values2] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[impropers-values3] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[bonds-2] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[angles-3] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[dihedrals-4] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[impropers-4] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_bonds_refresh_fragments PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[bonds-values0] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[angles-values1] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[dihedrals-values2] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[impropers-values3] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[bonds-values0] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[angles-values1] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[dihedrals-values2] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[impropers-values3] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[bonds-values0] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[angles-values1] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[dihedrals-values2] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[impropers-values3] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[bonds-values0] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[angles-values1] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[dihedrals-values2] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[impropers-values3] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[bonds-values0] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[angles-values1] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[dihedrals-values2] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[impropers-values3] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[bonds-values0] PASSED [ 33%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[angles-values1] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[dihedrals-values2] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[impropers-values3] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[bonds-values0] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[angles-values1] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[dihedrals-values2] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[impropers-values3] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[bonds-values0] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[angles-values1] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[dihedrals-values2] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[impropers-values3] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[bonds-values0] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[angles-values1] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[dihedrals-values2] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[impropers-values3] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[bonds-values0] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[angles-values1] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[dihedrals-values2] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[impropers-values3] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[bonds-values0] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[angles-values1] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[dihedrals-values2] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[impropers-values3] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[bonds-values0] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[angles-values1] PASSED [ 34%] 1216s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[dihedrals-values2] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[impropers-values3] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[bonds-2] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[angles-3] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[dihedrals-4] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[impropers-4] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[bonds-values0] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[angles-values1] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[dihedrals-values2] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[impropers-values3] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_bonds_refresh_fragments PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_all_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/1hvr.pdb-72] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_all_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/conect_parsing.pdb-8] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[bonds-values0] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[angles-values1] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[dihedrals-values2] PASSED [ 34%] 1217s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[impropers-values3] PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestAllCoordinatesKwarg::test_all_coordinates_length PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestAllCoordinatesKwarg::test_all_coordinates_frame PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestAllCoordinatesKwarg::test_second_frame PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty_extra PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_no_resindex_warning PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_no_segindex_warning PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_no_trivial_warning PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_trajectory PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_trajectory_multiple_frames PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_trajectory_iteration PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_velocities PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_forces PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty_no_atoms PASSED [ 34%] 1218s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty_creation_raises_error PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_universe.py::test_deprecate_b_tempfactors PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_universe.py::TestOnlyTopology::test_only_top PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-fragments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-fragments-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-fragments-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-molecules-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-molecules-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-molecules-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-residues-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-residues-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-residues-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-group-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-group-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-group-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-segments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-segments-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-segments-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-fragments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-fragments-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-fragments-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-molecules-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-molecules-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-molecules-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-residues-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-residues-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-residues-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-group-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-group-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-group-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-segments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-segments-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-segments-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-fragments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-fragments-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-fragments-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-molecules-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-molecules-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-molecules-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-residues-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-residues-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-residues-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-group-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-group-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-group-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-segments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-segments-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-segments-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-fragments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-fragments-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-fragments-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-molecules-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-molecules-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-molecules-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-residues-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-residues-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-residues-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-group-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-group-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-group-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-segments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-segments-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-segments-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-fragments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-fragments-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-fragments-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-molecules-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-molecules-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-molecules-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-residues-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-residues-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-residues-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-group-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-group-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-group-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-segments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-segments-residues] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-segments-segments] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-fragments-atoms] PASSED [ 34%] 1219s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-fragments-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-fragments-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-molecules-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-molecules-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-molecules-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-residues-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-residues-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-residues-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-group-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-group-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-group-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-segments-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-segments-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-segments-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-fragments-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-fragments-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-fragments-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-molecules-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-molecules-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-molecules-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-residues-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-residues-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-residues-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-group-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-group-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-group-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-segments-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-segments-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-segments-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-fragments-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-fragments-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-fragments-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-molecules-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-molecules-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-molecules-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-residues-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-residues-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-residues-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-group-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-group-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-group-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-segments-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-segments-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-segments-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-fragments-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-fragments-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-fragments-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-molecules-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-molecules-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-molecules-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-residues-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-residues-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-residues-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-group-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-group-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-group-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-segments-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-segments-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-segments-segments] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-fragments-atoms] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-fragments-residues] PASSED [ 34%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-fragments-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-molecules-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-molecules-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-molecules-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-residues-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-residues-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-residues-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-group-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-group-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-group-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-segments-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-segments-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-segments-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-fragments-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-fragments-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-fragments-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-molecules-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-molecules-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-molecules-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-residues-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-residues-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-residues-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-group-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-group-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-group-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-segments-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-segments-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-segments-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-fragments-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-fragments-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-fragments-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-molecules-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-molecules-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-molecules-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-residues-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-residues-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-residues-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-group-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-group-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-group-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-segments-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-segments-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-segments-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-fragments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-molecules] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-group] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-fragments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-molecules] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-group] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-fragments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-molecules] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-group] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-com-fragments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-com-molecules] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-com-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-com-group] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-com-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-fragments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-molecules] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-group] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-fragments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-molecules] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-group] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-fragments-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-fragments-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-fragments-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-molecules-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-molecules-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-molecules-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-residues-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-residues-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-residues-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-group-atoms] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-group-residues] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-group-segments] PASSED [ 35%] 1220s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-segments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-segments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-segments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-fragments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-fragments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-fragments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-molecules-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-molecules-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-molecules-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-residues-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-residues-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-residues-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-group-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-group-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-group-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-segments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-segments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-segments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-fragments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-fragments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-fragments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-molecules-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-molecules-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-molecules-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-residues-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-residues-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-residues-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-group-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-group-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-group-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-segments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-segments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-segments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-fragments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-fragments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-fragments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-molecules-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-molecules-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-molecules-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-residues-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-residues-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-residues-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-group-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-group-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-group-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-segments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-segments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-segments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-fragments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-fragments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-fragments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-molecules-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-molecules-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-molecules-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-residues-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-residues-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-residues-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-group-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-group-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-group-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-segments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-segments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-segments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-fragments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-fragments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-fragments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-molecules-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-molecules-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-molecules-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-residues-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-residues-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-residues-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-group-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-group-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-group-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-segments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-segments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-segments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-fragments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-fragments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-fragments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-molecules-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-molecules-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-molecules-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-residues-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-residues-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-residues-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-group-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-group-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-group-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-segments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-segments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-segments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-fragments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-fragments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-fragments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-molecules-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-molecules-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-molecules-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-residues-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-residues-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-residues-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-group-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-group-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-group-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-segments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-segments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-segments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-fragments-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-fragments-residues] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-fragments-segments] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-molecules-atoms] PASSED [ 35%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-molecules-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-molecules-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-residues-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-residues-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-residues-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-group-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-group-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-group-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-segments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-segments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-segments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-fragments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-fragments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-fragments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-molecules-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-molecules-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-molecules-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-residues-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-residues-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-residues-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-group-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-group-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-group-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-segments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-segments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-segments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-fragments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-fragments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-fragments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-molecules-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-molecules-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-molecules-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-residues-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-residues-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-residues-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-group-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-group-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-group-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-segments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-segments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-segments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-fragments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-fragments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-fragments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-molecules-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-molecules-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-molecules-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-residues-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-residues-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-residues-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-group-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-group-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-group-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-segments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-segments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-segments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[False-fragments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[False-molecules] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[False-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[False-group] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[False-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[True-fragments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[True-molecules] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[True-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[True-group] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[True-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[fragments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[fragments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[fragments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[molecules-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[molecules-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[molecules-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[residues-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[residues-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[residues-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[group-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[group-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[group-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[segments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[segments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[segments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[fragments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[fragments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[fragments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[molecules-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[molecules-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[molecules-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[residues-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[residues-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[residues-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[group-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[group-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[group-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[segments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[segments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[segments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[com-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[com-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[com-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[cog-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[cog-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[cog-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[None-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[None-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[None-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[fragments-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[fragments-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[fragments-segments] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[molecules-atoms] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[molecules-residues] PASSED [ 36%] 1221s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[molecules-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[residues-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[residues-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[residues-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[group-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[group-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[group-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[segments-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[segments-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[segments-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-fragments-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-fragments-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-fragments-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-molecules-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-molecules-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-molecules-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-residues-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-residues-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-residues-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-group-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-group-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-group-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-segments-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-segments-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-segments-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-fragments-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-fragments-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-fragments-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-molecules-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-molecules-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-molecules-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-residues-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-residues-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-residues-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-group-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-group-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-group-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-segments-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-segments-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-segments-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-fragments-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-fragments-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-fragments-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-molecules-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-molecules-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-molecules-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-residues-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-residues-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-residues-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-group-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-group-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-group-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-segments-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-segments-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-segments-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[com-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[com-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[com-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[cog-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[cog-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[cog-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[None-atoms] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[None-residues] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[None-segments] PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_unwrap.py::test_uncontiguous PASSED [ 36%] 1222s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_update PASSED [ 36%] 1223s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_compounded_update PASSED [ 36%] 1223s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_chained_update PASSED [ 36%] 1223s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_chained_update2 PASSED [ 36%] 1224s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_slice_is_static PASSED [ 36%] 1224s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_kwarg_check PASSED [ 36%] 1224s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_atoms PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_copy PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelectionNotraj::test_update PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUAGCallCount::test_updated_when_creating PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUAGCallCount::test_updated_when_next PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestDynamicUAG::test_nested_uags PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestDynamicUAG::test_driveby PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::test_representations PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::test_empty_UAG PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-atoms-atoms] PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-atoms-residues] PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-atoms-segments] PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-group-atoms] PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-group-residues] PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-group-segments] PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-segments-atoms] PASSED [ 36%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-segments-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-segments-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-residues-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-residues-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-residues-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-molecules-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-molecules-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-molecules-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-fragments-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-fragments-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-fragments-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-atoms-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-atoms-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-atoms-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-group-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-group-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-group-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-segments-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-segments-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-segments-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-residues-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-residues-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-residues-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-molecules-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-molecules-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-molecules-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-fragments-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-fragments-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-fragments-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-atoms-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-atoms-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-atoms-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-group-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-group-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-group-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-segments-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-segments-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-segments-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-residues-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-residues-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-residues-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-molecules-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-molecules-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-molecules-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-fragments-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-fragments-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-fragments-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-atoms-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-atoms-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-atoms-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-group-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-group-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-group-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-segments-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-segments-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-segments-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-residues-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-residues-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-residues-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-molecules-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-molecules-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-molecules-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-fragments-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-fragments-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-fragments-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-atoms-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-atoms-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-atoms-segments] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-group-atoms] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-group-residues] PASSED [ 37%] 1225s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-group-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-segments-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-segments-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-segments-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-residues-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-residues-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-residues-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-molecules-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-molecules-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-molecules-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-fragments-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-fragments-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-fragments-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-atoms-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-atoms-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-atoms-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-group-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-group-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-group-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-segments-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-segments-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-segments-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-residues-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-residues-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-residues-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-molecules-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-molecules-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-molecules-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-fragments-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-fragments-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-fragments-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-atoms-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-atoms-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-atoms-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-group-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-group-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-group-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-segments-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-segments-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-segments-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-residues-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-residues-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-residues-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-molecules-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-molecules-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-molecules-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-fragments-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-fragments-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-fragments-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-atoms-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-atoms-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-atoms-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-group-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-group-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-group-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-segments-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-segments-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-segments-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-residues-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-residues-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-residues-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-molecules-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-molecules-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-molecules-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-fragments-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-fragments-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-fragments-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-atoms-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-atoms-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-atoms-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-group-atoms] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-group-residues] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-group-segments] PASSED [ 37%] 1226s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-segments-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-segments-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-segments-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-residues-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-residues-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-residues-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-molecules-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-molecules-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-molecules-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-fragments-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-fragments-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-fragments-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-atoms-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-atoms-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-atoms-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-group-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-group-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-group-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-segments-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-segments-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-segments-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-residues-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-residues-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-residues-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-molecules-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-molecules-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-molecules-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-fragments-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-fragments-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-fragments-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-atoms-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-atoms-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-atoms-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-group-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-group-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-group-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-segments-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-segments-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-segments-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-residues-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-residues-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-residues-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-molecules-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-molecules-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-molecules-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-fragments-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-fragments-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-fragments-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-atoms-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-atoms-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-atoms-segments] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-group-atoms] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-group-residues] PASSED [ 37%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-group-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-segments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-segments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-segments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-residues-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-residues-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-residues-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-molecules-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-molecules-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-molecules-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-fragments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-fragments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-fragments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-atoms-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-atoms-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-atoms-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-group-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-group-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-group-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-segments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-segments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-segments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-residues-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-residues-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-residues-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-molecules-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-molecules-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-molecules-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-fragments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-fragments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-fragments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-atoms-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-atoms-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-atoms-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-group-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-group-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-group-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-segments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-segments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-segments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-residues-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-residues-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-residues-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-molecules-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-molecules-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-molecules-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-fragments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-fragments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-fragments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-atoms-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-atoms-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-atoms-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-group-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-group-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-group-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-segments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-segments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-segments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-residues-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-residues-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-residues-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-molecules-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-molecules-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-molecules-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-fragments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-fragments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-fragments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-atoms-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-atoms-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-atoms-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-group-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-group-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-group-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-segments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-segments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-segments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-residues-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-residues-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-residues-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-molecules-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-molecules-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-molecules-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-fragments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-fragments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-fragments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-atoms-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-atoms-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-atoms-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-group-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-group-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-group-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-segments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-segments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-segments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-residues-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-residues-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-residues-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-molecules-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-molecules-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-molecules-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-fragments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-fragments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-fragments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-atoms-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-atoms-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-atoms-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-group-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-group-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-group-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-segments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-segments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-segments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-residues-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-residues-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-residues-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-molecules-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-molecules-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-molecules-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-fragments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-fragments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-fragments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-atoms-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-atoms-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-atoms-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-group-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-group-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-group-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-segments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-segments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-segments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-residues-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-residues-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-residues-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-molecules-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-molecules-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-molecules-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-fragments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-fragments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-fragments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-atoms-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-atoms-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-atoms-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-group-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-group-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-group-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-segments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-segments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-segments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-residues-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-residues-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-residues-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-molecules-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-molecules-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-molecules-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-fragments-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-fragments-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-fragments-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-group] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-molecules] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-fragments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-group] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-segments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-molecules] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-fragments] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[atoms-atoms] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[atoms-residues] PASSED [ 38%] 1227s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[atoms-segments] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[group-atoms] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[group-residues] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[group-segments] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[segments-atoms] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[segments-residues] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[segments-segments] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[residues-atoms] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[residues-residues] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[residues-segments] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[molecules-atoms] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[molecules-residues] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[molecules-segments] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[fragments-atoms] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[fragments-residues] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[fragments-segments] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[atoms-atoms] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[atoms-residues] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[atoms-segments] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[group-atoms] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[group-residues] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[group-segments] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[segments-atoms] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[segments-residues] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[segments-segments] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[residues-atoms] PASSED [ 38%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[residues-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[residues-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[molecules-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[molecules-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[molecules-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[fragments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[fragments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[fragments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[com-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[com-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[com-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[cog-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[cog-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[cog-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[atoms-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[atoms-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[atoms-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[group-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[group-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[group-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[segments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[segments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[segments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[residues-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[residues-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[residues-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[molecules-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[molecules-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[molecules-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[fragments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[fragments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[fragments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-atoms-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-atoms-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-atoms-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-group-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-group-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-group-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-segments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-segments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-segments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-residues-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-residues-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-residues-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-molecules-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-molecules-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-molecules-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-fragments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-fragments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-fragments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-atoms-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-atoms-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-atoms-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-group-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-group-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-group-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-segments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-segments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-segments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-residues-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-residues-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-residues-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-molecules-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-molecules-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-molecules-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-fragments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-fragments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-fragments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-atoms-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-atoms-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-atoms-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-group-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-group-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-group-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-segments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-segments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-segments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-residues-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-residues-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-residues-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-molecules-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-molecules-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-molecules-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-fragments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-fragments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-fragments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-atoms-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-atoms-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-atoms-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-group-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-group-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-group-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-segments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-segments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-segments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-residues-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-residues-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-residues-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-molecules-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-molecules-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-molecules-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-fragments-atoms] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-fragments-residues] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-fragments-segments] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_box_fail[box0] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_box_fail[box1] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_small_box PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_large_box PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_atoms PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_group[com] PASSED [ 39%] 1228s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_group[cog] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_residues[com] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_residues[cog] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_segments[com] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_segments[cog] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_fragments[com] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_fragments[cog] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_is_periodic[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-False] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_is_periodic[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-True] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_is_periodic[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-True] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coordsshape[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coordsshape[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-5545] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coordsshape[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-375] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_unit_cell[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-unit_cell0] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_unit_cell[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-unit_cell1] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_unit_cell[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-unit_cell2] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_over_max PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_last PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_closed PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_after_read PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_immediately PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_normal[10] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_normal[42] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_normal[21] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_negative PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_iteration PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_open_wrong_mode PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_raise_not_existing PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_zero_based_frames_counting PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_natoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_natoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-5545] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_natoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-375] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_closed PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_length_traj[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-98] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_length_traj[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-1] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_length_traj[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-10] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_write_mode_file PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_iterating_twice PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_header_remarks[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-* DIMS ADK SEQUENCE FOR PORE PROGRAM * WRITTEN BY LIZ DENNING (6.2008) * DATE: 6/ 6/ 8 17:23:56 CREATED BY USER: denniej0 ] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_header_remarks[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-Created by DCD pluginREMARKS Created 06 July, 2014 at 17:29Y5~CORD,] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_header_remarks[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-* CHARMM TRICLINIC BOX TESTING * (OLIVER BECKSTEIN 2014) * BASED ON NPTDYN.INP : SCOTT FELLER, NIH, 7/15/95 * TEST EXTENDED SYSTEM CONSTANT PRESSURE AND TEMPERATURE * DYNAMICS WITH WATER BOX. * DATE: 7/ 7/14 13:59:46 CREATED BY USER: oliver ] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coord_values[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_adk_coords.npy-frames0] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coord_values[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy-frames1] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coord_values[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_c36_coords.npy-frames2] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_adk_coords.npy-frame_idx0] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy-frame_idx1] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_c36_coords.npy-frame_idx2] PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_header PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_no_header PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_header_twice PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_header_wrong_mode PASSED [ 39%] 1229s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_mode PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_remarks_property PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_header PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_num_frames PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_dcd_coordinate_data_shape PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_seek PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_coord_match PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_unit_cell PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[int32] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[int64] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[float32] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[float64] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[int] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[float] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_array_like[array] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_array_like[list] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_wrong_shape_xyz PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_wrong_shape_box PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_relative_frame_sizes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_relative_frame_sizes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_relative_frame_sizes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_file_size_breakdown[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_file_size_breakdown[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_file_size_breakdown[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_nframessize_int[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_nframessize_int[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_nframessize_int[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice0-98] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice1-98] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice2-98] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice3-98] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice4-98] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice5-2] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice6-10] PASSED [ 39%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice7-8] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice8-1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice9-0] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice10-1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice11-1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice12-2] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice13-1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice14-1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice15-2] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice16-4] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice17-3] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice18-2] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[fac-shape0] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[fca-shape1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[afc-shape2] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[acf-shape3] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[caf-shape4] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[cfa-shape5] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_atomindices[indices0] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_atomindices[indices1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_atomindices[indices2] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_random_unitcell PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_natoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_natoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_over_seek[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_over_seek[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_after_iteration[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_after_iteration[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_zero_based_frame_tell[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_zero_based_frame_tell[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_closed[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_closed[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_iter[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_iter[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_double_iter[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_double_iter[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek_negative[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek_negative[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_raise_not_existing[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_raise_not_existing[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_open_wrong_mode[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_open_wrong_mode[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_write_mode_file[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_write_mode_file[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_last_frame[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_last_frame[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_closed[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_closed[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_immediately[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_immediately[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_offset[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_offset[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_set_offsets[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_set_offsets[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_fail_wrong_offsets[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_fail_wrong_offsets[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_overflow[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_overflow[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all_bytes[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all_bytes[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_largefile[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_largefile[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_steps[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_steps[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_time[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_time[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_box_xtc PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_xyz_xtc PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_box_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_xyz_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_velocities_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_forces_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_lmbda_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_step_xtc PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_time_xtc PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_prec_xtc PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_box_xtc PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_xyx_xtc PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[int32] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[int64] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[float32] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[float64] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[int] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[float] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_array_like[array] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_array_like[list] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_prec PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_different_box_xtc PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_x_xtc PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_prec PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_step_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_time_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_box_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_xyx_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_velocities_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_forces_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[int32] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[int64] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[float32] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[float64] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[int] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[float] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_array_like[array] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_array_like[list] PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_box_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_natoms PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_x_trr PASSED [ 40%] 1231s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_v PASSED [ 40%] 1232s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_f PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_get_guesser PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_get_guesser_with_universe PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_invalid_attribute PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_attribute_with_missing_parent_attr PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_force_guessing PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_partial_guessing PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_force_guess_priority PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_partial_guess_attr_with_unknown_no_value_label PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_existing_read PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_existing_in_universe PASSED [ 40%] 1232s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_force PASSED [ 40%] 1237s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_out_of_order_init PASSED [ 40%] 1242s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_out_of_order_guess PASSED [ 40%] 1242s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_force_guess_overwrites_existing_bonds PASSED [ 40%] 1266s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guessing_angles_respects_bond_kwargs PASSED [ 40%] 1268s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guessing_dihedrals_respects_bond_kwargs PASSED [ 40%] 1268s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_unsupported_attribute PASSED [ 40%] 1268s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_singular PASSED [ 40%] 1270s testsuite/MDAnalysisTests/guesser/test_base.py::test_Universe_guess_bonds_deprecated PASSED [ 40%] 1270s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 40%] 1270s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc] PASSED [ 40%] 1270s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[universe_input2] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.pdb] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_specific_array PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_from_universe PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_from_guesser_object PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_warn PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_get_atom_mass[H-1.008] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_get_atom_mass[XYZ-0.0] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_atom_mass PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_with_no_reference_elements PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_types PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element_empty PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element_singledigit PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element_1H PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_partial_guess_elements PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_elements_from_no_data PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[AO5*-O] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[F--F] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[HB1-H] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[OC2-O] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[1he2-H] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[3hg2-H] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[OH--O] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[HO-H] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[he-H] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[zn-ZN] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[Ca2+-CA] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[CA-C] PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_charge PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_Error PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bond_vdw_error PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bond_coord_error PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_angles_with_no_bonds PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_impropers PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_dihedrals_with_no_angles PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_impropers_with_angles PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_impropers_with_no_angles PASSED [ 40%] 1271s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water PASSED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water_fudge_factor_passed[0-0] PASSED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water_fudge_factor_passed[0.55-4] PASSED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water_fudge_factor_passed[200-6] PASSED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_adk PASSED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_peptide PASSED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[c1ccccc1] SKIPPED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[C1=CC=CC=C1] SKIPPED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[CCO] SKIPPED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[c1ccccc1Cc1ccccc1] SKIPPED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[c1ccccc1] SKIPPED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[C1=CC=CC=C1] SKIPPED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[CCO] SKIPPED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[c1ccccc1Cc1ccccc1] SKIPPED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 40%] 1272s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_aromaticity SKIPPED [ 40%] 1276s testsuite/MDAnalysisTests/import/test_import.py::TestMDAImport::test_os_dot_fork_not_called PASSED [ 40%] 1276s testsuite/MDAnalysisTests/import/test_import.py::TestMDAImport::test_os_dot_fork_not_none PASSED [ 40%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q0-res0-b0] PASSED [ 40%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q0-res0-b1] PASSED [ 40%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q1-res1-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q1-res1-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q2-res2-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q2-res2-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q3-res3-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q3-res3-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q4-res4-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q4-res4-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q5-res5-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q5-res5-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q6-res6-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q6-res6-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q7-res7-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q7-res7-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q8-res8-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q8-res8-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres0-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres0-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres1-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres1-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres2-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres2-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres3-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres3-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres4-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres4-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres5-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres5-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres6-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres6-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres7-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres7-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres8-b0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres8-b1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values3] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values4] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values5] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges0-ref0] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges1-ref1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges2-ref2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges3-ref3] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_in2d PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_in2d_VE[arr10-arr20] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_cutil.py::test_in2d_VE[arr11-arr21] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCheckResultArray::test_check_result_array_pass PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCheckResultArray::test_check_result_array_wrong_shape PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCheckResultArray::test_check_result_array_wrong_dtype PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::test_transform_StoR_pass[float32] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::test_transform_StoR_pass[float64] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_noresults PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_1] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_2] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_1_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_2_atomgroup] PASSED [ 41%] 1276s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_1] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_2] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_1_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_2_atomgroup] PASSED [ 41%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_2] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_1_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_2_atomgroup] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box0-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box0-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box1-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box1-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-None-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-None-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box0-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box0-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box1-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box1-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-None-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-None-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box0-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box0-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box1-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box1-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-None-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-None-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box0-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box0-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box1-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box1-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-None-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-None-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box0-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box0-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box1-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box1-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-None-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-None-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box0-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box0-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box1-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box1-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-None-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-None-100] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box0-1] PASSED [ 42%] 1277s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box0-100] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box1-1] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box1-100] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-None-1] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-None-100] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box0-1] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box0-100] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box1-1] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box1-100] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-None-1] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-None-100] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box0-1] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box0-100] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box1-1] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box1-100] PASSED [ 42%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box0-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box0-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box1-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box1-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-None-1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-None-100] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.02-_bruteforce_capped_self-None] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.02-_bruteforce_capped_self-box1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.02-_bruteforce_capped_self-box2] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.2-_bruteforce_capped_self-None] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.2-_bruteforce_capped_self-box1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.2-_bruteforce_capped_self-box2] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.02-_pkdtree_capped_self-None] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.02-_pkdtree_capped_self-box1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.02-_pkdtree_capped_self-box2] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.2-_nsgrid_capped_self-None] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.2-_nsgrid_capped_self-box1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.2-_nsgrid_capped_self-box2] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.02-_bruteforce_capped-None] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.02-_bruteforce_capped-box1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.02-_bruteforce_capped-box2] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-None] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-box1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-box2] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-None] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-box1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-box2] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-None] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-box1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-box2] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-None] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-box1] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-box2] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system_universe-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system_universe-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system_universe-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system_universe-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system_universe-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system_universe-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system_universe-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system_universe-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system_universe-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system_universe-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system_universe-serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system_universe-openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC2[serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC2[openmp] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::test_distance_array_overflow_exception PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::test_self_distance_array_overflow_exception PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_simple[serial] PASSED [ 43%] 1278s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_simple[openmp] PASSED [ 43%] 1279s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_outarray[serial] PASSED [ 43%] 1279s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_outarray[openmp] PASSED [ 43%] 1279s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_periodic[serial] PASSED [ 43%] 1279s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_periodic[openmp] PASSED [ 43%] 1279s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_simple[serial] PASSED [ 43%] 1279s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_simple[openmp] PASSED [ 43%] 1280s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-serial] PASSED [ 43%] 1281s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-openmp] PASSED [ 43%] 1282s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-serial] PASSED [ 43%] 1283s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-openmp] PASSED [ 43%] 1283s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-serial] PASSED [ 43%] 1283s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-openmp] PASSED [ 43%] 1283s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-serial] PASSED [ 43%] 1283s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-openmp] PASSED [ 43%] 1283s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-serial] PASSED [ 43%] 1283s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-openmp] PASSED [ 43%] 1283s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-serial] PASSED [ 43%] 1283s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-openmp] PASSED [ 43%] 1284s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[all-np_slice0-serial] PASSED [ 43%] 1284s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[all-np_slice0-openmp] PASSED [ 43%] 1284s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice1-serial] PASSED [ 43%] 1284s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice1-openmp] PASSED [ 43%] 1284s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice2-serial] PASSED [ 43%] 1284s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice2-openmp] PASSED [ 43%] 1284s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_simple[serial] PASSED [ 43%] 1284s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_simple[openmp] PASSED [ 43%] 1284s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_outarray[serial] PASSED [ 43%] 1284s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_outarray[openmp] PASSED [ 43%] 1285s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_periodic[serial] PASSED [ 43%] 1285s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_periodic[openmp] PASSED [ 43%] 1285s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_simple[serial] PASSED [ 43%] 1285s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_simple[openmp] PASSED [ 43%] 1285s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-serial] PASSED [ 43%] 1286s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-openmp] PASSED [ 43%] 1286s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-serial] PASSED [ 43%] 1287s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-openmp] PASSED [ 43%] 1287s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-serial] PASSED [ 43%] 1287s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-openmp] PASSED [ 43%] 1287s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-serial] PASSED [ 43%] 1287s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-openmp] PASSED [ 43%] 1287s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-serial] PASSED [ 43%] 1287s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-openmp] PASSED [ 43%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-serial] PASSED [ 43%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-openmp] PASSED [ 43%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice0-serial] PASSED [ 43%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice0-openmp] PASSED [ 43%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice1-serial] PASSED [ 43%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice1-openmp] PASSED [ 43%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol-serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol-openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol_single-serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol_single-openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_selfdist[serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_selfdist[openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_distarray[serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_distarray[openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_dist[serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_dist[openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_wrong_wassenaar_distance[serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_wrong_wassenaar_distance[openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::test_issue_3725[None] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::test_issue_3725[box1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::test_issue_3725[box2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::test_HAS_DISTOPIA_incompatible_distopia PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions_atomgroups-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions_atomgroups-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions_atomgroups-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions_atomgroups-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badbox[serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badbox[openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badresult[serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badresult[openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions_atomgroups-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions_atomgroups-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions_atomgroups-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions_atomgroups-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift3] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift3] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift3] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift3] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions_atomgroups-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions_atomgroups-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions_atomgroups-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions_atomgroups-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_bad_result[serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_bad_result[openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift0-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift0-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift0-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift1-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift1-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift1-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift2-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift2-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift2-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift3-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift3-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift3-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift0-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift0-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift0-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift1-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift1-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift1-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift2-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift2-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift2-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift3-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift3-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift3-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift0-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift0-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift0-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift1-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift1-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift1-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift2-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift2-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift2-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift3-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift3-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift3-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift0-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift0-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift0-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift1-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift1-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift1-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift2-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift2-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift2-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift3-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift3-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift3-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions_atomgroups-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions_atomgroups-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions_atomgroups-float32] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions_atomgroups-float64] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_wronglength[serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_wronglength[openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_bad_result[serial] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_bad_result[openmp] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case1] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case2] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case3] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case4] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case5] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case0] PASSED [ 44%] 1288s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case3] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case4] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case5] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case0] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case1] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case2] PASSED [ 44%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case3] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case4] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case5] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case2] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case3] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case4] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case5] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case2] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case3] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case4] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case5] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case2] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case3] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case4] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case5] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_bonds[serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_bonds[openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_angles[serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_angles[openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_dihedrals[serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_dihedrals[openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_pos-serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_pos-openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_ag-serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_ag-openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_pos_box-serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_pos_box-openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_ag_box-serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_ag_box-openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_strictly_in_central_image_ortho[serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_strictly_in_central_image_ortho[openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_in_central_image_tric[serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_in_central_image_tric[openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_angles[serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_angles[openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_dihedrals[serial] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_dihedrals[openmp] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[serial-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[serial-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[serial-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[openmp-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[openmp-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[openmp-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[serial-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[serial-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[serial-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[openmp-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[openmp-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[openmp-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[serial-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[serial-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[serial-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[openmp-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[openmp-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[openmp-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[serial-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[serial-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[serial-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[openmp-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[openmp-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[openmp-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[bruteforce-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[bruteforce-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[bruteforce-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[pkdtree-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[pkdtree-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[pkdtree-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[nsgrid-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[nsgrid-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[nsgrid-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[None-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[None-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[None-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[bruteforce-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[bruteforce-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[bruteforce-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[pkdtree-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[pkdtree-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[pkdtree-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[nsgrid-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[nsgrid-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[nsgrid-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[None-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[None-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[None-None] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[serial-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[serial-box1] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[openmp-box0] PASSED [ 45%] 1289s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[serial-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[serial-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[serial-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[openmp-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[openmp-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[serial-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[serial-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[serial-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[openmp-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[openmp-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[serial-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[serial-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[serial-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[openmp-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[openmp-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[serial-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[serial-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[serial-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[openmp-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[openmp-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[serial-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[serial-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[serial-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[openmp-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[openmp-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[serial-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[serial-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[serial-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[openmp-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[openmp-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[serial-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[serial-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[openmp-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[serial-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[serial-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[openmp-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[serial-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[serial-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[serial-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[openmp-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[openmp-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[serial-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[serial-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[serial-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[openmp-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[openmp-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[openmp-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-0.0-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-0.0-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-0.0-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-None-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-None-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-None-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-0.0-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-0.0-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-0.0-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-None-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-None-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-None-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-0.0-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-0.0-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-0.0-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-None-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-None-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-None-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-0.0-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-0.0-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-0.0-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-None-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-None-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-None-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-0.0-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-0.0-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-0.0-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-None-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-None-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-None-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-0.0-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-0.0-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-0.0-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-None-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-None-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-None-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-0.0-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-0.0-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-0.0-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-None-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-None-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-None-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-0.0-box0] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-0.0-box1] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-0.0-None] PASSED [ 45%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[serial-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[serial-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[openmp-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[openmp-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[serial-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[serial-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[openmp-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[openmp-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[serial-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[serial-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[serial-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[openmp-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[openmp-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[openmp-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[serial-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[serial-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[serial-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[openmp-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[openmp-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[openmp-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[serial-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[serial-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[serial-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[openmp-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[openmp-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[openmp-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[serial-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[serial-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[openmp-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[openmp-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords1-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords1-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords1-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords2-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords2-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords2-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords3-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords3-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords3-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords4-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords4-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords4-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords5-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords5-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords5-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords6-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords6-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords6-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords7-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords7-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords7-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords8-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords8-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords8-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords9-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords9-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords9-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords1-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords1-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords1-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords2-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords2-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords2-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords3-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords3-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords3-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords4-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords4-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords4-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords5-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords5-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords5-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords6-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords6-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords6-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords7-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords7-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords7-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords8-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords8-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords8-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords9-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords9-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords9-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords1-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords1-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords1-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords2-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords2-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords2-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords3-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords3-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords3-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords1-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords1-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords1-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords2-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords2-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords2-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords3-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords3-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords3-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-0.0-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-None-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-None-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-None-None] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-0.0-box0] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-0.0-box1] PASSED [ 46%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-0.0-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-0.0-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-0.0-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-None-box0] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-None-box1] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-None-None] PASSED [ 47%] 1290s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-0.0-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-0.0-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-0.0-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-None-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-None-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-None-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-0.0-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-0.0-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-0.0-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-None-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-None-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-None-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-0.0-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-0.0-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-0.0-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-None-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-None-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-None-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-0.0-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-0.0-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-0.0-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-None-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-None-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-None-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-0.0-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-0.0-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-0.0-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-None-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-None-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-None-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-0.0-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-0.0-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-0.0-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-None-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-None-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-None-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-0.0-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-0.0-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-0.0-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-None-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-None-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-None-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-0.0-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-0.0-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-0.0-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-None-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-None-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-None-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-0.0-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-0.0-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-0.0-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-None-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-None-box1] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-None-None] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-0.0-box0] PASSED [ 47%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-None-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-0.0-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-0.0-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-0.0-None] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-None-box0] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-None-box1] PASSED [ 48%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-None-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-None-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-0.0-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-0.0-box1] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-0.0-None] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-None-box0] PASSED [ 49%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-None-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-None-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-0.0-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-0.0-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-0.0-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-None-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-None-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-None-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-0.0-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-0.0-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-0.0-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-None-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-None-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-None-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-0.0-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-0.0-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-0.0-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-None-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-None-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-None-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-0.0-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-0.0-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-0.0-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-None-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-None-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-None-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-0.0-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-0.0-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-0.0-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-None-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-None-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-None-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-0.0-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-0.0-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-0.0-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-None-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-None-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-None-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-0.0-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-0.0-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-0.0-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-None-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-None-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-None-None] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-0.0-box0] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-0.0-box1] PASSED [ 50%] 1291s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-0.0-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-None-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-None-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-None-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords0-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords0-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords1-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords1-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords2-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords2-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords3-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords3-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords0-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords0-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords1-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords1-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords2-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords2-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords3-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords3-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords0-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords0-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords0-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords1-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords1-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords1-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords2-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords2-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords2-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords3-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords3-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords3-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords4-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords4-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords4-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords5-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords5-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords5-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords6-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords6-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords6-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords0-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords0-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords0-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords1-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords1-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords1-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords2-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords2-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords2-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords3-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords3-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords3-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords4-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords4-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords4-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords5-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords5-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords5-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords6-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords6-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords6-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords0-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords0-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords0-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords1-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords1-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords1-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords2-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords2-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords2-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords3-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords3-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords3-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords4-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords4-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords4-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords5-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords5-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords5-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords6-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords6-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords6-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords7-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords7-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords7-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords8-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords8-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords8-None] PASSED [ 50%] 1292s 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testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords5-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords6-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords6-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords6-None] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords7-box0] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords7-box1] PASSED [ 50%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords7-None] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords8-box0] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords8-box1] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords8-None] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords9-box0] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords9-box1] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords9-None] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords10-box0] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords10-box1] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords10-None] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords11-box0] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords11-box1] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords11-None] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords12-box0] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords12-box1] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords12-None] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords13-box0] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords13-box1] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords13-None] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords14-box0] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords14-box1] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords14-None] PASSED [ 51%] 1292s 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testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords3-None] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords4-box0] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords4-box1] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords4-None] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords5-box0] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords5-box1] PASSED [ 51%] 1292s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords5-None] PASSED [ 51%] 1292s 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testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift119-box1] PASSED [ 53%] 1293s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift120-box0] PASSED [ 53%] 1293s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift120-box1] PASSED [ 54%] 1293s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift121-box0] PASSED [ 54%] 1293s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift121-box1] PASSED [ 54%] 1293s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift122-box0] PASSED [ 54%] 1293s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift122-box1] PASSED [ 54%] 1293s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift123-box0] PASSED [ 54%] 1293s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift123-box1] PASSED [ 54%] 1293s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift124-box0] PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift124-box1] PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_log.py::TestProgressBar::test_output PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_log.py::TestProgressBar::test_disable PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_log.py::TestProgressBar::test_verbose_disable PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_neighborsearch.py::test_search PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_neighborsearch.py::test_zero PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box0] PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box1] PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box2] PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box3] PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box4] PASSED [ 54%] 1294s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_badcutoff[-4-Cutoff must be positive] PASSED [ 54%] 1295s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_badcutoff[100000-Cutoff 100000 too large for box] PASSED [ 54%] 1295s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_ns_grid_noneighbor PASSED [ 54%] 1295s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_PBC_rect PASSED [ 54%] 1296s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_PBC PASSED [ 54%] 1296s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_pairs PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_pair_distances PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_distances PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_search[None-results0] PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_search[box1-results1] PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_search[box2-results2] PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[None-21] PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[box1-21] PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[box2-26] PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[box3-33] PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_probe_close_to_box_boundary PASSED [ 54%] 1297s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_zero_max_dist PASSED [ 54%] 1298s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_around_res PASSED [ 54%] 1298s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_around_overlapping PASSED [ 54%] 1298s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2229_part1 PASSED [ 54%] 1298s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2229_part2 PASSED [ 54%] 1298s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2919 PASSED [ 54%] 1298s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2345 PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2670 PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_3183 SKIPPED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_setcoords[None-1.0-Donot provide cutoff distance for non PBC aware calculations] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_setcoords[b1-None-Provide a cutoff distance with tree.set_coords(...)] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchfail PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_search[b0-q0-result0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_search[b1-q1-result1] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_search[b2-q2-result2] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_nopbc PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b0-2.0-result0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b1-2.0-result1] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b2-4.5-Set cutoff greater or equal to the radius.] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b3-0.1-result3] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_ckd_searchpairs_nopbc[0.1-result0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_ckd_searchpairs_nopbc[0.3-result1] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b0-q0-result0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b1-q1-result1] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b2-q2-result2] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b3-q3-result3] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_dummy[float64] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_dummy[float32] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_regression[float64] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_regression[float32] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_absence_cutil PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_presence_cutil PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[LYS300:HZ1-residue0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[K300:HZ1-residue1] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[K300-residue2] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[LYS 300:HZ1-residue3] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[M1:CA-residue4] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue_ValueError PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIS-H] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HISA-H] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HISB-H] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HSE-H] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HSD-H] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIS1-H] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIS2-H] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIE-H] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HID-H] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[LYS-K] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[LYSH-K] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[LYN-K] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ALA-A] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASP-D] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASPH-D] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASH-D] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLU-E] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLUH-E] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLH-E] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASN-N] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLN-Q] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYS-C] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYSH-C] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYS1-C] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYS2-C] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[H-strings0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[K-strings1] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[A-strings2] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[D-strings3] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[E-strings4] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[N-strings5] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[Q-strings6] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[C-strings7] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_ValueError[XYZXYZ] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_ValueError[\xa3] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_greedy_splitext PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable0-True] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable1-True] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable2-True] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable3-True] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable4-True] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable5-True] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[123-False] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[byte string-False] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[unicode string-False] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo.psf-None-False-foo.psf] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo.psf-pdb-False-foo.pdb] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo.psf-pdb-True-foo.psf] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo-pdb-False-foo.pdb] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo-pdb-True-foo.pdb] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_named_stream PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis0-y_axis0-1.5707963267948966] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis1-y_axis1-1.0471975511965976] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis2-y_axis2-1.5707963267948966] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis3-y_axis3-1.5707963267948966] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis4-y_axis4-1.0471975511965976] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis5-y_axis5-nan] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis6-y_axis6-0.0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_pi[x_axis0-y_axis0-3.141592653589793] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_pi[x_axis1-y_axis1-0.0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.16534698176788384] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.3306939635357677] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.4960409453036515] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.6613879270715354] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.8267349088394192] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.992081890607303] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.1574288723751869] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.3227758541430708] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.4881228359109546] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.6534698176788385] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.8188167994467224] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.984163781214606] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.14951076298249] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.3148577447503738] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.4802047265182576] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.6455517082861415] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.8108986900540254] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.9762456718219092] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[3.141592653589793] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm[vector0-1] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm[vector1-1.0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm[vector2-0.0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.16534698176788384] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.3306939635357677] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.4960409453036515] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.6613879270715354] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.8267349088394192] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.992081890607303] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.1574288723751869] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.3227758541430708] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.4881228359109546] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.6534698176788385] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.8188167994467224] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.984163781214606] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.14951076298249] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.3148577447503738] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.4802047265182576] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.6455517082861415] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.8108986900540254] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.9762456718219092] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[3.141592653589793] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_normal[vec10-vec20-value0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_normal[vec11-vec21-0.0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_lower_clip PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_stp PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_dihedral PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_pdot PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_pnorm PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths0] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths1] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths2] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths3] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths4] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths5] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths6] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths7] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths8] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths9] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths10] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths11] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths12] PASSED [ 54%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths13] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths14] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths15] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths16] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths17] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths18] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths19] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths0] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths1] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths2] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths3] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths4] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths5] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths6] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths7] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths8] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths9] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths10] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths11] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths12] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths13] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths14] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths15] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths16] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths17] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths18] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths19] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths0] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths1] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths2] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths3] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths4] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths5] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths6] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths7] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths8] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths9] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths10] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths11] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths12] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths13] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths14] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths15] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths16] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths17] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths18] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths19] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths0] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths1] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths2] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths3] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths4] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths5] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths6] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths7] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths8] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths9] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths10] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths11] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths12] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths13] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths14] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths15] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths16] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths17] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths18] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths19] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths0] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths1] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths2] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths3] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths4] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths5] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths6] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths7] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths8] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths9] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths10] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths11] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths12] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths13] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths14] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths15] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths16] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths17] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths18] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths19] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths0] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths1] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths2] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths3] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths4] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths5] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths6] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths7] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths8] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths9] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths10] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths11] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths12] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths13] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths14] PASSED [ 55%] 1299s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths15] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths16] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths17] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths18] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths19] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths0] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths1] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths2] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths3] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths4] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths5] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths6] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths7] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths8] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths9] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths10] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths11] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths12] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths13] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths14] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths15] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths16] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths17] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths18] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths19] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths0] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths1] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths2] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths3] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths4] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths5] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths6] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths7] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths8] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths9] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths10] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths11] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths12] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths13] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths14] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths15] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths16] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths17] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths18] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths19] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths0] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths1] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths2] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths3] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths4] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths5] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths6] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths7] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths8] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths9] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths10] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths11] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths12] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths13] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths14] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths15] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths16] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths17] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths18] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths19] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths0] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths1] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths2] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths3] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths4] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths5] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths6] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths7] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths8] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths9] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths10] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths11] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths12] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths13] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths14] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths15] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths16] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths17] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths18] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths19] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths0] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths1] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths2] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths3] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths4] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths5] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths6] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths7] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths8] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths9] PASSED [ 55%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths10] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths11] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths12] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths13] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths14] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths15] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths16] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths17] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths18] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths19] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths0] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths1] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths2] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths3] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths4] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths5] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths6] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths7] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths8] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths9] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths10] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths11] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths12] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths13] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths14] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths15] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths16] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths17] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths18] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths19] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths0] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths1] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths2] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths3] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths4] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths5] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths6] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths7] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths8] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths9] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths10] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths11] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths12] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths13] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths14] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths15] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths16] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths17] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths18] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths19] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths0] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths1] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths2] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths3] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths4] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths5] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths6] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths7] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths8] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths9] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths10] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths11] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths12] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths13] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths14] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths15] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths16] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths17] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths18] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths19] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths0] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths1] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths2] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths3] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths4] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths5] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths6] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths7] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths8] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths9] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths10] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths11] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths12] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths13] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths14] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths15] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths16] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths17] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths18] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths19] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths0] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths1] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths2] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths3] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths4] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths5] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths6] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths7] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths8] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths9] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths10] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths11] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths12] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths13] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths14] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths15] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths16] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths17] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths18] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths19] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths0] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths1] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths2] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths3] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths4] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths5] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths6] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths7] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths8] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths9] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths10] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths11] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths12] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths13] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths14] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths15] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths16] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths17] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths18] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths19] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths0] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths1] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths2] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths3] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths4] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths5] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths6] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths7] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths8] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths9] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths10] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths11] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths12] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths13] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths14] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths15] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths16] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths17] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths18] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths19] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths0] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths1] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths2] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths3] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths4] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths5] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths6] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths7] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths8] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths9] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths10] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths11] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths12] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths13] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths14] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths15] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths16] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths17] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths18] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths19] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths0] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths1] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths2] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths3] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths4] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths5] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths6] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths7] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths8] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths9] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths10] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths11] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths12] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths13] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths14] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths15] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths16] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths17] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths18] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths19] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths0] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths1] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths2] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths3] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths4] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths5] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths6] PASSED [ 56%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths7] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths8] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths9] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths10] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths11] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths12] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths13] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths14] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths15] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths16] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths17] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths18] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths19] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths0] PASSED [ 57%] 1300s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths8] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths9] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths10] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths11] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths12] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths13] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths14] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths15] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths16] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths17] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths18] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths19] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths0] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths1] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths2] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths3] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths4] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths5] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths6] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths7] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths8] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths9] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths10] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths11] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths12] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths13] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths14] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths15] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths16] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths17] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths18] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths19] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths0] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths1] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths2] PASSED [ 57%] 1300s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths17] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths18] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths19] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths0] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths1] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths2] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths3] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths4] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths5] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths6] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths7] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths8] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths9] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths10] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths11] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths12] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths13] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths14] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths15] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths16] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths17] PASSED [ 57%] 1300s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths5] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths6] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths7] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths8] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths9] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths10] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths11] PASSED [ 57%] 1300s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths19] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths0] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths1] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths2] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths3] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths4] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths5] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths6] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths7] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths8] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths9] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths10] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths11] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths12] PASSED [ 57%] 1300s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths0] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths1] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths2] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths3] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths4] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths5] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths6] PASSED [ 57%] 1300s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths14] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths15] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths16] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths17] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths18] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths19] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths0] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths1] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths2] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths3] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths4] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths5] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths6] PASSED [ 57%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths7] PASSED [ 57%] 1300s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths18] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths19] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths0] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths1] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths2] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths3] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths4] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths5] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths6] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths7] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths8] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths9] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths10] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths11] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths12] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths13] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths14] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths15] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths16] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths17] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths18] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths19] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths0] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths1] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths2] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths3] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths4] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths5] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths6] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths7] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths8] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths9] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths10] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths11] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths12] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths13] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths14] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths15] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths16] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths17] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths18] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths19] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths0] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths1] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths2] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths3] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths4] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths5] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths6] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths7] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths8] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths9] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths10] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths11] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths12] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths13] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths14] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths15] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths16] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths17] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths18] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths19] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths0] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths1] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths2] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths3] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths4] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths5] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths6] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths7] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths8] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths9] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths10] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths11] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths12] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths13] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths14] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths15] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths16] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths17] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths18] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths19] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths0] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths1] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths2] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths3] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths4] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths5] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths6] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths7] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths8] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths9] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths10] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths11] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths12] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths13] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths14] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths15] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths16] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths17] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths18] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths19] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths0] PASSED [ 58%] 1300s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths1] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths2] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths3] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths4] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths5] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths6] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths7] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths8] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths9] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths10] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths11] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths12] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths13] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths14] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths15] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths16] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths17] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths18] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths19] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths0] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths1] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths2] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths3] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths4] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths5] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths6] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths7] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths8] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths9] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths10] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths11] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths12] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths13] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths14] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths15] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths16] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths17] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths18] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths19] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths0] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths1] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths2] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths3] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths4] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths5] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths6] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths7] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths8] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths9] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths10] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths11] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths12] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths13] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths14] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths15] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths16] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths17] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths18] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths19] PASSED [ 58%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths0] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths1] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths2] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths3] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths4] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths5] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths6] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths7] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths8] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths9] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths10] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths11] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths12] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths13] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths14] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths15] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths16] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths17] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths18] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths19] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths0] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths1] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths2] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths3] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths4] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths5] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths6] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths7] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths8] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths9] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths10] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths11] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths12] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths13] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths14] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths15] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths16] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths17] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths18] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths19] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths0] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths1] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths2] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths3] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths4] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths5] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths6] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths7] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths8] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths9] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths10] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths11] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths12] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths13] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths14] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths15] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths16] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths17] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths18] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths19] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths0] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths1] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths2] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths3] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths4] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths5] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths6] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths7] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths8] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths9] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths10] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths11] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths12] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths13] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths14] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths15] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths16] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths17] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths18] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths19] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths0] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths1] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths2] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths3] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths4] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths5] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths6] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths7] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths8] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths9] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths10] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths11] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths12] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths13] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths14] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths15] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths16] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths17] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths18] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths19] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths0] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths1] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths2] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths3] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths4] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths5] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths6] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths7] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths8] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths9] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths10] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths11] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths12] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths13] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths14] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths15] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths16] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths17] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths18] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths19] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths0] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths1] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths2] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths3] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths4] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths5] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths6] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths7] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths8] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths9] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths10] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths11] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths12] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths13] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths14] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths15] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths16] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths17] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths18] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths19] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths0] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths1] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths2] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths3] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths4] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths5] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths6] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths7] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths8] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths9] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths10] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths11] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths12] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths13] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths14] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths15] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths16] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths17] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths18] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths19] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths0] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths1] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths2] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths3] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths4] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths5] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths6] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths7] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths8] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths9] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths10] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths11] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths12] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths13] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths14] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths15] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths16] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths17] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths18] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths19] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths0] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths1] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths2] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths3] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths4] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths5] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths6] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths7] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths8] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths9] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths10] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths11] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths12] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths13] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths14] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths15] PASSED [ 59%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths16] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths17] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths18] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths19] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths0] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths1] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths2] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths3] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths4] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths5] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths6] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths7] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths8] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths9] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths10] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths11] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths12] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths13] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths14] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths15] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths16] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths17] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths18] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths19] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths0] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths1] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths2] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths3] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths4] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths5] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths6] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths7] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths8] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths9] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths10] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths11] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths12] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths13] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths14] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths15] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths16] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths17] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths18] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths19] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths0] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths1] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths2] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths3] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths4] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths5] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths6] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths7] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths8] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths9] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths10] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths11] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths12] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths13] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths14] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths15] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths16] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths17] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths18] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths19] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths0] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths1] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths2] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths3] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths4] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths5] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths6] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths7] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths8] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths9] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths10] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths11] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths12] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths13] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths14] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths15] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths16] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths17] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths18] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths19] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths0] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths1] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths2] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths3] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths4] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths5] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths6] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths7] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths8] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths9] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths10] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths11] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths12] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths13] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths14] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths15] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths16] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths17] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths18] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths19] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths0] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths1] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths2] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths3] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths4] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths5] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths6] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths7] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths8] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths9] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths10] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths11] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths12] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths13] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths14] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths15] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths16] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths17] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths18] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths19] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths0] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths1] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths2] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths3] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths4] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths5] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths6] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths7] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths8] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths9] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths10] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths11] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths12] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths13] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths14] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths15] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths16] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths17] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths18] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths19] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths0] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths1] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths2] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths3] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths4] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths5] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths6] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths7] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths8] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths9] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths10] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths11] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths12] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths13] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths14] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths15] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths16] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths17] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths18] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths19] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths0] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths1] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths2] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths3] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths4] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths5] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths6] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths7] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths8] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths9] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths10] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths11] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths12] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths13] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths14] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths15] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths16] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths17] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths18] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths19] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths0] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths1] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths2] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths3] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths4] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths5] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths6] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths7] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths8] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths9] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths10] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths11] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths12] PASSED [ 60%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths13] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths14] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths15] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths16] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths17] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths18] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths19] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths0] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths1] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths2] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths3] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths4] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths5] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths6] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths7] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths8] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths9] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths10] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths11] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths12] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths13] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths14] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths15] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths16] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths17] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths18] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths19] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths0] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths1] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths2] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths3] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths4] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths5] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths6] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths7] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths8] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths9] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths10] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths11] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths12] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths13] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths14] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths15] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths16] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths17] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths18] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths19] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths0] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths1] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths2] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths3] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths4] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths5] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths6] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths7] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths8] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths9] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths10] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths11] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths12] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths13] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths14] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths15] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths16] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths17] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths18] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths19] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths0] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths1] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths2] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths3] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths4] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths5] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths6] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths7] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths8] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths9] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths10] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths11] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths12] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths13] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths14] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths15] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths16] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths17] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths18] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths19] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths0] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths1] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths2] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths3] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths4] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths5] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths6] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths7] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths8] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths9] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths10] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths11] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths12] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths13] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths14] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths15] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths16] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths17] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths18] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths19] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths0] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths1] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths2] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths3] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths4] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths5] PASSED [ 61%] 1301s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths6] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths7] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths8] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths9] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths10] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths11] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths12] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths13] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths14] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths15] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths16] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths17] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths18] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths19] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths0] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths1] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths2] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths3] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths4] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths5] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths6] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths7] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths8] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths9] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths10] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths11] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths12] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths13] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths14] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths15] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths16] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths17] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths18] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths19] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths0] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths1] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths2] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths3] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths4] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths5] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths6] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths7] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths8] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths9] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths10] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths11] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths12] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths13] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths14] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths15] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths16] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths17] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths18] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths19] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths0] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths1] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths2] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths3] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths4] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths5] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths6] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths7] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths8] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths9] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths10] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths11] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths12] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths13] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths14] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths15] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths16] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths17] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths18] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths19] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths0] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths1] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths2] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths3] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths4] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths5] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths6] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths7] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths8] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths9] PASSED [ 61%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths10] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths11] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths12] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths13] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths14] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths15] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths16] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths17] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths18] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths19] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths0] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths1] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths2] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths3] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths4] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths5] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths6] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths7] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths8] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths9] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths10] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths11] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths12] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths13] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths14] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths15] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths16] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths17] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths18] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths19] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths0] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths1] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths2] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths3] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths4] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths5] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths6] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths7] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths8] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths9] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths10] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths11] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths12] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths13] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths14] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths15] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths16] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths17] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths18] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths19] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths0] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths1] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths2] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths3] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths4] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths5] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths6] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths7] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths8] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths9] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths10] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths11] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths12] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths13] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths14] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths15] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths16] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths17] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths18] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths19] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths0] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths1] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths2] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths3] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths4] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths5] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths6] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths7] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths8] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths9] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths10] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths11] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths12] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths13] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths14] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths15] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths16] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths17] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths18] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths19] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths0] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths1] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths2] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths3] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths4] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths5] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths6] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths7] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths8] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths9] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths10] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths11] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths12] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths13] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths14] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths15] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths16] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths17] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths18] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths19] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths0] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths1] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths2] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths3] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths4] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths5] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths6] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths7] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths8] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths9] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths10] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths11] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths12] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths13] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths14] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths15] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths16] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths17] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths18] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths19] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths0] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths1] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths2] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths3] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths4] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths5] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths6] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths7] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths8] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths9] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths10] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths11] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths12] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths13] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths14] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths15] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths16] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths17] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths18] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths19] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths0] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths1] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths2] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths3] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths4] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths5] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths6] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths7] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths8] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths9] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths10] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths11] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths12] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths13] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths14] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths15] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths16] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths17] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths18] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths19] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths0] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths1] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths2] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths3] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths4] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths5] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths6] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths7] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths8] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths9] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths10] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths11] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths12] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths13] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths14] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths15] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths16] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths17] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths18] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths19] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths0] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths1] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths2] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths3] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths4] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths5] PASSED [ 62%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths6] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths7] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths8] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths9] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths10] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths11] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths12] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths13] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths14] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths15] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths16] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths17] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths18] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths19] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths0] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths1] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths2] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths3] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths4] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths5] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths6] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths7] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths8] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths9] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths10] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths11] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths12] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths13] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths14] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths15] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths16] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths17] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths18] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths19] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths0] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths1] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths2] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths3] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths4] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths5] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths6] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths7] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths8] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths9] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths10] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths11] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths12] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths13] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths14] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths15] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths16] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths17] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths18] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths19] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths0] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths1] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths2] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths3] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths4] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths5] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths6] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths7] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths8] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths9] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths10] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths11] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths12] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths13] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths14] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths15] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths16] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths17] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths18] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths19] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths0] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths1] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths2] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths3] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths4] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths5] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths6] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths7] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths8] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths9] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths10] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths11] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths12] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths13] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths14] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths15] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths16] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths17] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths18] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths19] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-60-60] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-60-90] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-90-60] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-90-90] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-60-60] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-60-90] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-90-60] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-90-90] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[int] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[float] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[float32] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[float64] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles0] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles1] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles2] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles3] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles4] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles5] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles6] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths0] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths1] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths2] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths3] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths4] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths5] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths6] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths7] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths8] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths9] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths10] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths11] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths12] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths13] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths14] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths15] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths16] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths17] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths18] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths19] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths0] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths1] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths2] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths3] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths4] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths5] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths6] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths7] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths8] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths9] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths10] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths11] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths12] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths13] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths14] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths15] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths16] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths17] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths18] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths19] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths0] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths1] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths2] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths3] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths4] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths5] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths6] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths7] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths8] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths9] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths10] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths11] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths12] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths13] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths14] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths15] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths16] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths17] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths18] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths19] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths0] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths1] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths2] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths3] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths4] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths5] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths6] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths7] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths8] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths9] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths10] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths11] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths12] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths13] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths14] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths15] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths16] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths17] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths18] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths19] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths0] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths1] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths2] PASSED [ 63%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths3] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths4] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths5] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths6] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths7] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths8] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths9] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths10] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths11] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths12] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths13] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths14] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths15] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths16] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths17] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths18] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths19] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths0] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths1] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths2] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths3] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths4] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths5] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths6] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths7] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths8] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths9] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths10] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths11] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths12] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths13] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths14] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths15] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths16] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths17] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths18] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths19] PASSED [ 64%] 1302s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths0] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths1] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths2] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths3] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths4] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths5] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths6] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths7] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths8] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths9] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths10] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths11] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths12] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths13] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths14] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths15] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths16] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths17] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths18] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths19] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths0] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths1] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths2] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths3] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths4] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths5] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths6] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths7] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths8] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths9] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths10] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths11] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths12] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths13] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths14] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths15] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths16] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths17] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths18] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths19] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths0] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths1] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths2] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths3] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths4] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths5] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths6] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths7] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths8] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths9] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths10] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths11] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths12] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths13] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths14] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths15] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths16] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths17] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths18] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths19] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths0] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths1] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths2] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths3] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths4] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths5] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths6] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths7] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths8] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths9] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths10] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths11] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths12] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths13] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths14] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths15] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths16] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths17] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths18] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths19] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths0] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths1] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths2] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths3] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths4] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths5] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths6] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths7] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths8] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths9] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths10] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths11] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths12] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths13] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths14] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths15] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths16] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths17] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths18] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths19] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths0] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths1] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths2] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths3] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths4] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths5] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths6] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths7] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths8] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths9] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths10] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths11] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths12] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths13] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths14] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths15] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths16] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths17] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths18] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths19] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths0] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths1] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths2] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths3] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths4] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths5] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths6] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths7] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths8] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths9] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths10] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths11] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths12] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths13] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths14] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths15] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths16] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths17] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths18] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths19] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths0] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths1] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths2] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths3] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths4] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths5] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths6] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths7] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths8] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths9] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths10] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths11] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths12] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths13] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths14] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths15] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths16] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths17] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths18] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths19] PASSED [ 64%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths0] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths1] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths2] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths3] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths4] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths5] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths6] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths7] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths8] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths9] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths10] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths11] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths12] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths13] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths14] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths15] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths16] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths17] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths18] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths19] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths0] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths1] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths2] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths3] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths4] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths5] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths6] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths7] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths8] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths9] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths10] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths11] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths12] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths13] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths14] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths15] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths16] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths17] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths18] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths19] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths0] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths1] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths2] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths3] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths4] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths5] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths6] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths7] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths8] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths9] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths10] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths11] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths12] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths13] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths14] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths15] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths16] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths17] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths18] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths19] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths0] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths1] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths2] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths3] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths4] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths5] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths6] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths7] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths8] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths9] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths10] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths11] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths12] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths13] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths14] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths15] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths16] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths17] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths18] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths19] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths0] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths1] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths2] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths3] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths4] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths5] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths6] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths7] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths8] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths9] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths10] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths11] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths12] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths13] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths14] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths15] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths16] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths17] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths18] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths19] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths0] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths1] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths2] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths3] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths4] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths5] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths6] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths7] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths8] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths9] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths10] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths11] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths12] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths13] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths14] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths15] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths16] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths17] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths18] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths19] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths0] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths1] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths2] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths3] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths4] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths5] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths6] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths7] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths8] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths9] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths10] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths11] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths12] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths13] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths14] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths15] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths16] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths17] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths18] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths19] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths0] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths1] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths2] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths3] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths4] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths5] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths6] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths7] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths8] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths9] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths10] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths11] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths12] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths13] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths14] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths15] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths16] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths17] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths18] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths19] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths0] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths1] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths2] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths3] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths4] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths5] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths6] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths7] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths8] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths9] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths10] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths11] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths12] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths13] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths14] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths15] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths16] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths17] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths18] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths19] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths0] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths1] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths2] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths3] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths4] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths5] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths6] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths7] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths8] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths9] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths10] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths11] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths12] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths13] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths14] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths15] PASSED [ 65%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths16] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths17] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths18] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths19] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths0] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths1] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths2] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths3] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths4] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths5] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths6] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths7] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths8] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths9] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths10] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths11] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths12] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths13] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths14] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths15] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths16] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths17] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths18] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths19] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths0] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths1] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths2] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths3] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths4] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths5] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths6] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths7] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths8] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths9] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths10] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths11] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths12] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths13] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths14] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths15] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths16] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths17] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths18] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths19] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths0] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths1] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths2] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths3] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths4] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths5] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths6] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths7] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths8] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths9] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths10] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths11] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths12] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths13] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths14] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths15] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths16] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths17] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths18] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths19] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths0] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths1] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths2] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths3] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths4] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths5] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths6] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths7] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths8] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths9] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths10] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths11] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths12] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths13] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths14] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths15] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths16] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths17] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths18] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths19] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths0] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths1] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths2] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths3] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths4] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths5] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths6] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths7] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths8] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths9] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths10] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths11] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths12] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths13] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths14] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths15] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths16] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths17] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths18] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths19] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths0] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths1] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths2] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths3] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths4] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths5] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths6] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths7] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths8] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths9] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths10] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths11] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths12] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths13] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths14] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths15] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths16] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths17] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths18] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths19] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths0] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths1] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths2] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths3] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths4] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths5] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths6] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths7] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths8] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths9] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths10] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths11] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths12] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths13] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths14] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths15] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths16] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths17] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths18] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths19] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths0] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths1] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths2] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths3] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths4] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths5] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths6] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths7] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths8] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths9] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths10] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths11] PASSED [ 66%] 1303s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths12] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths13] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths14] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths15] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths16] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths17] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths18] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths19] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths0] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths1] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths2] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths3] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths4] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths5] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths6] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths7] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths8] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths9] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths10] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths11] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths12] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths13] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths14] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths15] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths16] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths17] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths18] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths19] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths0] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths1] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths2] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths3] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths4] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths5] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths6] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths7] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths8] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths9] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths10] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths11] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths12] PASSED [ 66%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths13] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths14] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths15] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths16] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths17] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths18] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths19] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths0] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths1] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths2] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths3] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths4] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths5] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths6] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths7] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths8] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths9] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths10] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths11] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths12] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths13] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths14] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths15] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths16] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths17] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths18] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths19] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths0] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths1] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths2] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths3] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths4] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths5] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths6] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths7] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths8] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths9] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths10] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths11] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths12] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths13] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths14] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths15] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths16] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths17] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths18] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths19] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths0] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths1] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths2] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths3] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths4] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths5] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths6] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths7] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths8] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths9] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths10] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths11] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths12] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths13] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths14] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths15] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths16] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths17] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths18] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths19] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths0] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths1] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths2] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths3] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths4] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths5] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths6] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths7] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths8] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths9] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths10] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths11] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths12] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths13] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths14] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths15] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths16] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths17] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths18] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths19] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths0] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths1] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths2] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths3] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths4] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths5] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths6] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths7] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths8] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths9] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths10] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths11] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths12] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths13] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths14] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths15] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths16] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths17] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths18] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths19] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths0] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths1] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths2] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths3] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths4] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths5] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths6] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths7] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths8] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths9] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths10] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths11] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths12] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths13] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths14] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths15] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths16] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths17] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths18] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths19] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths0] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths1] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths2] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths3] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths4] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths5] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths6] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths7] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths8] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths9] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths10] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths11] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths12] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths13] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths14] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths15] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths16] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths17] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths18] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths19] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths0] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths1] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths2] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths3] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths4] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths5] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths6] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths7] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths8] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths9] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths10] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths11] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths12] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths13] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths14] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths15] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths16] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths17] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths18] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths19] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths0] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths1] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths2] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths3] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths4] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths5] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths6] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths7] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths8] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths9] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths10] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths11] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths12] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths13] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths14] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths15] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths16] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths17] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths18] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths19] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths0] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths1] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths2] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths3] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths4] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths5] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths6] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths7] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths8] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths9] PASSED [ 67%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths10] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths11] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths12] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths13] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths14] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths15] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths16] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths17] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths18] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths19] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths0] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths1] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths2] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths3] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths4] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths5] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths6] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths7] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths8] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths9] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths10] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths11] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths12] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths13] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths14] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths15] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths16] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths17] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths18] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths19] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths0] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths1] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths2] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths3] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths4] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths5] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths6] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths7] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths8] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths9] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths10] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths11] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths12] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths13] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths14] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths15] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths16] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths17] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths18] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths19] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths0] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths1] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths2] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths3] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths4] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths5] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths6] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths7] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths8] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths9] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths10] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths11] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths12] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths13] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths14] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths15] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths16] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths17] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths18] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths19] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths0] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths1] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths2] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths3] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths4] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths5] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths6] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths7] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths8] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths9] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths10] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths11] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths12] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths13] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths14] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths15] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths16] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths17] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths18] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths19] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths0] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths1] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths2] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths3] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths4] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths5] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths6] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths7] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths8] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths9] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths10] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths11] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths12] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths13] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths14] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths15] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths16] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths17] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths18] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths19] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths0] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths1] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths2] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths3] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths4] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths5] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths6] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths7] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths8] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths9] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths10] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths11] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths12] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths13] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths14] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths15] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths16] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths17] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths18] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths19] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths0] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths1] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths2] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths3] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths4] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths5] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths6] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths7] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths8] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths9] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths10] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths11] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths12] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths13] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths14] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths15] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths16] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths17] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths18] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths19] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths0] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths1] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths2] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths3] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths4] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths5] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths6] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths7] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths8] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths9] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths10] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths11] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths12] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths13] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths14] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths15] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths16] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths17] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths18] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths19] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths0] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths1] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths2] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths3] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths4] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths5] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths6] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths7] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths8] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths9] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths10] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths11] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths12] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths13] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths14] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths15] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths16] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths17] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths18] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths19] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths0] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths1] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths2] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths3] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths4] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths5] PASSED [ 68%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths6] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths7] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths8] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths9] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths10] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths11] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths12] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths13] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths14] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths15] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths16] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths17] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths18] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths19] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths0] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths1] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths2] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths3] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths4] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths5] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths6] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths7] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths8] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths9] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths10] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths11] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths12] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths13] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths14] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths15] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths16] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths17] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths18] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths19] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths0] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths1] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths2] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths3] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths4] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths5] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths6] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths7] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths8] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths9] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths10] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths11] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths12] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths13] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths14] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths15] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths16] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths17] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths18] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths19] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths0] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths1] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths2] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths3] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths4] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths5] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths6] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths7] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths8] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths9] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths10] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths11] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths12] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths13] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths14] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths15] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths16] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths17] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths18] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths19] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths0] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths1] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths2] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths3] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths4] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths5] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths6] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths7] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths8] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths9] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths10] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths11] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths12] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths13] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths14] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths15] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths16] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths17] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths18] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths19] PASSED [ 69%] 1304s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths0] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths1] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths2] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths3] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths4] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths5] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths6] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths7] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths8] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths9] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths10] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths11] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths12] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths13] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths14] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths15] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths16] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths17] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths18] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths19] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths0] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths1] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths2] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths3] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths4] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths5] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths6] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths7] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths8] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths9] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths10] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths11] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths12] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths13] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths14] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths15] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths16] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths17] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths18] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths19] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths0] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths1] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths2] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths3] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths4] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths5] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths6] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths7] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths8] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths9] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths10] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths11] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths12] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths13] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths14] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths15] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths16] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths17] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths18] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths19] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths0] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths1] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths2] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths3] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths4] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths5] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths6] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths7] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths8] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths9] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths10] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths11] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths12] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths13] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths14] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths15] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths16] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths17] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths18] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths19] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths0] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths1] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths2] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths3] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths4] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths5] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths6] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths7] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths8] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths9] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths10] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths11] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths12] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths13] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths14] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths15] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths16] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths17] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths18] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths19] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths0] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths1] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths2] PASSED [ 69%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths3] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths4] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths5] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths6] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths7] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths8] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths9] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths10] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths11] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths12] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths13] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths14] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths15] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths16] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths17] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths18] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths19] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths0] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths1] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths2] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths3] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths4] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths5] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths6] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths7] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths8] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths9] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths10] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths11] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths12] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths13] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths14] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths15] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths16] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths17] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths18] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths19] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths0] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths1] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths2] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths3] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths4] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths5] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths6] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths7] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths8] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths9] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths10] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths11] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths12] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths13] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths14] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths15] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths16] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths17] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths18] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths19] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths0] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths1] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths2] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths3] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths4] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths5] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths6] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths7] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths8] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths9] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths10] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths11] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths12] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths13] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths14] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths15] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths16] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths17] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths18] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths19] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths0] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths1] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths2] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths3] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths4] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths5] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths6] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths7] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths8] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths9] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths10] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths11] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths12] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths13] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths14] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths15] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths16] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths17] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths18] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths19] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths0] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths1] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths2] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths3] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths4] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths5] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths6] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths7] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths8] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths9] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths10] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths11] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths12] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths13] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths14] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths15] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths16] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths17] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths18] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths19] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths0] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths1] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths2] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths3] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths4] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths5] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths6] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths7] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths8] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths9] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths10] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths11] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths12] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths13] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths14] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths15] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths16] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths17] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths18] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths19] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths0] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths1] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths2] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths3] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths4] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths5] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths6] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths7] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths8] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths9] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths10] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths11] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths12] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths13] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths14] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths15] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths16] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths17] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths18] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths19] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths0] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths1] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths2] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths3] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths4] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths5] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths6] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths7] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths8] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths9] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths10] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths11] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths12] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths13] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths14] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths15] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths16] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths17] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths18] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths19] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths0] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths1] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths2] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths3] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths4] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths5] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths6] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths7] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths8] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths9] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths10] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths11] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths12] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths13] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths14] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths15] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths16] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths17] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths18] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths19] PASSED [ 70%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths0] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths1] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths2] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths3] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths4] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths5] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths6] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths7] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths8] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths9] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths10] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths11] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths12] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths13] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths14] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths15] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths16] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths17] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths18] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths19] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths0] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths1] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths2] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths3] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths4] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths5] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths6] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths7] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths8] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths9] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths10] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths11] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths12] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths13] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths14] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths15] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths16] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths17] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths18] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths19] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths0] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths1] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths2] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths3] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths4] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths5] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths6] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths7] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths8] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths9] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths10] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths11] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths12] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths13] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths14] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths15] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths16] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths17] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths18] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths19] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths0] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths1] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths2] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths3] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths4] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths5] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths6] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths7] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths8] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths9] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths10] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths11] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths12] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths13] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths14] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths15] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths16] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths17] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths18] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths19] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths0] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths1] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths2] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths3] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths4] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths5] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths6] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths7] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths8] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths9] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths10] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths11] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths12] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths13] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths14] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths15] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths16] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths17] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths18] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths19] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths0] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths1] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths2] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths3] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths4] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths5] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths6] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths7] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths8] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths9] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths10] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths11] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths12] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths13] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths14] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths15] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths16] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths17] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths18] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths19] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths0] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths1] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths2] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths3] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths4] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths5] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths6] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths7] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths8] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths9] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths10] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths11] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths12] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths13] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths14] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths15] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths16] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths17] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths18] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths19] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths0] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths1] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths2] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths3] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths4] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths5] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths6] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths7] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths8] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths9] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths10] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths11] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths12] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths13] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths14] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths15] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths16] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths17] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths18] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths19] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths0] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths1] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths2] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths3] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths4] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths5] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths6] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths7] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths8] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths9] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths10] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths11] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths12] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths13] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths14] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths15] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths16] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths17] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths18] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths19] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths0] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths1] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths2] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths3] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths4] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths5] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths6] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths7] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths8] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths9] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths10] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths11] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths12] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths13] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths14] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths15] PASSED [ 71%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths16] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths17] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths18] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths19] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths0] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths1] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths2] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths3] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths4] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths5] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths6] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths7] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths8] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths9] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths10] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths11] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths12] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths13] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths14] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths15] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths16] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths17] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths18] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths19] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths0] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths1] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths2] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths3] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths4] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths5] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths6] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths7] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths8] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths9] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths10] PASSED [ 72%] 1305s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths11] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths12] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths13] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths14] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths15] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths16] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths17] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths18] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths19] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths0] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths1] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths2] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths3] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths4] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths5] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths6] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths7] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths8] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths9] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths10] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths11] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths12] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths13] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths14] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths15] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths16] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths17] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths18] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths19] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths0] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths1] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths2] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths3] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths4] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths5] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths6] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths7] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths8] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths9] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths10] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths11] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths12] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths13] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths14] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths15] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths16] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths17] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths18] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths19] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths0] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths1] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths2] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths3] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths4] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths5] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths6] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths7] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths8] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths9] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths10] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths11] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths12] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths13] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths14] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths15] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths16] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths17] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths18] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths19] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths0] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths1] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths2] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths3] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths4] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths5] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths6] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths7] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths8] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths9] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths10] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths11] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths12] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths13] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths14] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths15] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths16] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths17] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths18] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths19] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths0] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths1] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths2] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths3] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths4] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths5] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths6] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths7] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths8] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths9] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths10] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths11] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths12] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths13] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths14] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths15] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths16] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths17] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths18] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths19] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths0] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths1] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths2] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths3] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths4] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths5] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths6] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths7] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths8] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths9] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths10] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths11] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths12] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths13] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths14] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths15] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths16] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths17] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths18] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths19] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths0] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths1] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths2] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths3] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths4] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths5] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths6] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths7] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths8] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths9] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths10] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths11] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths12] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths13] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths14] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths15] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths16] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths17] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths18] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths19] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths0] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths1] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths2] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths3] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths4] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths5] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths6] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths7] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths8] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths9] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths10] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths11] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths12] PASSED [ 72%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths13] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths14] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths15] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths16] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths17] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths18] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths19] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths0] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths1] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths2] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths3] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths4] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths5] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths6] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths7] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths8] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths9] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths10] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths11] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths12] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths13] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths14] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths15] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths16] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths17] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths18] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths19] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths0] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths1] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths2] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths3] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths4] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths5] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths6] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths7] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths8] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths9] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths10] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths11] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths12] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths13] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths14] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths15] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths16] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths17] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths18] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths19] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths0] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths1] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths2] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths3] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths4] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths5] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths6] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths7] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths8] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths9] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths10] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths11] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths12] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths13] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths14] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths15] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths16] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths17] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths18] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths19] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths0] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths1] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths2] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths3] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths4] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths5] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths6] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths7] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths8] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths9] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths10] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths11] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths12] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths13] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths14] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths15] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths16] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths17] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths18] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths19] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths0] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths1] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths2] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths3] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths4] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths5] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths6] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths7] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths8] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths9] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths10] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths11] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths12] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths13] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths14] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths15] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths16] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths17] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths18] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths19] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths0] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths1] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths2] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths3] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths4] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths5] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths6] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths7] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths8] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths9] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths10] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths11] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths12] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths13] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths14] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths15] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths16] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths17] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths18] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths19] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths0] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths1] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths2] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths3] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths4] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths5] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths6] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths7] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths8] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths9] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths10] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths11] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths12] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths13] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths14] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths15] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths16] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths17] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths18] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths19] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths0] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths1] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths2] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths3] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths4] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths5] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths6] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths7] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths8] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths9] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths10] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths11] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths12] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths13] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths14] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths15] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths16] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths17] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths18] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths19] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths0] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths1] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths2] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths3] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths4] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths5] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths6] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths7] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths8] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths9] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths10] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths11] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths12] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths13] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths14] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths15] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths16] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths17] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths18] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths19] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths0] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths1] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths2] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths3] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths4] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths5] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths6] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths7] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths8] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths9] PASSED [ 73%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths10] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths11] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths12] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths13] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths14] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths15] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths16] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths17] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths18] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths19] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths0] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths1] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths2] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths3] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths4] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths5] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths6] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths7] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths8] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths9] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths10] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths11] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths12] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths13] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths14] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths15] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths16] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths17] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths18] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths19] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths0] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths1] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths2] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths3] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths4] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths5] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths6] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths7] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths8] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths9] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths10] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths11] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths12] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths13] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths14] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths15] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths16] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths17] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths18] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths19] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths0] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths1] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths2] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths3] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths4] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths5] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths6] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths7] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths8] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths9] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths10] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths11] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths12] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths13] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths14] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths15] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths16] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths17] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths18] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths19] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths0] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths1] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths2] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths3] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths4] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths5] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths6] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths7] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths8] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths9] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths10] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths11] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths12] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths13] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths14] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths15] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths16] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths17] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths18] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths19] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths0] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths1] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths2] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths3] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths4] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths5] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths6] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths7] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths8] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths9] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths10] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths11] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths12] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths13] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths14] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths15] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths16] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths17] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths18] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths19] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths0] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths1] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths2] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths3] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths4] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths5] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths6] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths7] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths8] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths9] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths10] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths11] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths12] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths13] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths14] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths15] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths16] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths17] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths18] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths19] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths0] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths1] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths2] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths3] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths4] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths5] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths6] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths7] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths8] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths9] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths10] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths11] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths12] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths13] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths14] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths15] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths16] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths17] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths18] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths19] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths0] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths1] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths2] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths3] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths4] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths5] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths6] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths7] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths8] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths9] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths10] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths11] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths12] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths13] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths14] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths15] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths16] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths17] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths18] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths19] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths0] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths1] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths2] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths3] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths4] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths5] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths6] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths7] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths8] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths9] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths10] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths11] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths12] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths13] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths14] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths15] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths16] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths17] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths18] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths19] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths0] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths1] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths2] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths3] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths4] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths5] PASSED [ 74%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths6] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths7] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths8] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths9] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths10] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths11] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths12] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths13] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths14] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths15] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths16] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths17] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths18] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths19] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths0] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths1] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths2] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths3] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths4] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths5] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths6] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths7] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths8] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths9] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths10] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths11] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths12] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths13] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths14] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths15] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths16] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths17] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths18] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths19] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths0] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths1] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths2] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths3] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths4] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths5] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths6] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths7] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths8] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths9] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths10] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths11] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths12] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths13] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths14] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths15] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths16] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths17] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths18] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths19] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths0] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths1] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths2] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths3] PASSED [ 75%] 1306s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths4] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths5] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths6] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths7] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths8] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths9] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths10] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths11] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths12] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths13] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths14] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths15] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths16] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths17] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths18] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths19] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths0] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths1] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths2] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths3] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths4] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths5] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths6] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths7] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths8] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths9] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths10] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths11] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths12] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths13] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths14] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths15] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths16] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths17] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths18] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths19] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths0] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths1] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths2] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths3] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths4] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths5] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths6] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths7] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths8] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths9] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths10] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths11] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths12] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths13] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths14] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths15] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths16] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths17] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths18] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths19] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths0] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths1] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths2] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths3] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths4] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths5] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths6] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths7] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths8] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths9] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths10] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths11] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths12] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths13] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths14] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths15] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths16] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths17] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths18] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths19] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths0] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths1] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths2] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths3] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths4] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths5] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths6] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths7] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths8] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths9] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths10] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths11] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths12] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths13] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths14] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths15] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths16] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths17] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths18] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths19] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths0] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths1] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths2] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths3] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths4] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths5] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths6] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths7] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths8] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths9] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths10] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths11] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths12] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths13] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths14] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths15] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths16] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths17] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths18] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths19] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths0] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths1] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths2] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths3] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths4] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths5] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths6] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths7] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths8] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths9] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths10] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths11] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths12] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths13] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths14] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths15] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths16] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths17] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths18] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths19] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths0] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths1] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths2] PASSED [ 75%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths3] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths4] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths5] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths6] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths7] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths8] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths9] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths10] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths11] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths12] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths13] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths14] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths15] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths16] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths17] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths18] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths19] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths0] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths1] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths2] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths3] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths4] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths5] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths6] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths7] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths8] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths9] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths10] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths11] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths12] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths13] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths14] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths15] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths16] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths17] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths18] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths19] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths0] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths1] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths2] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths3] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths4] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths5] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths6] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths7] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths8] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths9] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths10] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths11] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths12] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths13] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths14] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths15] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths16] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths17] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths18] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths19] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths0] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths1] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths2] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths3] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths4] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths5] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths6] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths7] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths8] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths9] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths10] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths11] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths12] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths13] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths14] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths15] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths16] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths17] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths18] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths19] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths0] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths1] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths2] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths3] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths4] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths5] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths6] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths7] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths8] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths9] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths10] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths11] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths12] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths13] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths14] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths15] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths16] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths17] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths18] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths19] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths0] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths1] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths2] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths3] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths4] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths5] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths6] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths7] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths8] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths9] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths10] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths11] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths12] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths13] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths14] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths15] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths16] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths17] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths18] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths19] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths0] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths1] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths2] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths3] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths4] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths5] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths6] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths7] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths8] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths9] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths10] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths11] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths12] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths13] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths14] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths15] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths16] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths17] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths18] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths19] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths0] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths1] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths2] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths3] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths4] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths5] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths6] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths7] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths8] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths9] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths10] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths11] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths12] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths13] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths14] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths15] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths16] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths17] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths18] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths19] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths0] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths1] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths2] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths3] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths4] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths5] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths6] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths7] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths8] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths9] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths10] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths11] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths12] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths13] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths14] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths15] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths16] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths17] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths18] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths19] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths0] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths1] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths2] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths3] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths4] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths5] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths6] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths7] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths8] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths9] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths10] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths11] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths12] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths13] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths14] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths15] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths16] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths17] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths18] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths19] PASSED [ 76%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths0] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths1] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths2] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths3] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths4] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths5] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths6] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths7] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths8] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths9] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths10] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths11] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths12] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths13] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths14] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths15] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths16] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths17] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths18] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths19] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths0] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths1] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths2] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths3] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths4] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths5] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths6] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths7] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths8] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths9] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths10] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths11] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths12] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths13] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths14] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths15] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths16] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths17] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths18] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths19] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths0] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths1] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths2] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths3] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths4] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths5] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths6] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths7] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths8] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths9] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths10] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths11] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths12] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths13] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths14] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths15] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths16] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths17] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths18] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths19] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths0] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths1] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths2] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths3] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths4] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths5] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths6] PASSED [ 77%] 1307s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths3] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths4] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths5] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths6] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths7] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths8] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths9] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths10] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths11] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths12] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths13] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths14] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths15] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths16] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths17] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths18] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths19] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths0] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths1] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths2] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths3] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths4] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths5] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths6] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths7] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths8] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths9] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths10] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths11] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths12] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths13] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths14] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths15] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths16] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths17] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths18] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths19] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths0] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths1] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths2] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths3] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths4] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths5] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths6] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths7] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths8] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths9] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths10] PASSED [ 77%] 1307s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths3] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths4] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths5] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths6] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths7] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths8] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths9] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths10] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths11] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths12] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths13] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths14] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths15] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths16] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths17] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths18] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths19] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths0] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths1] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths2] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths3] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths4] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths5] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths6] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths7] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths8] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths9] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths10] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths11] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths12] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths13] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths14] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths15] PASSED [ 77%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths16] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths17] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths18] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths19] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths0] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths1] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths2] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths3] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths4] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths5] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths6] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths7] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths8] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths9] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths10] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths11] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths12] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths13] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths14] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths15] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths16] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths17] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths18] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths19] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths0] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths1] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths2] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths3] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths4] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths5] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths6] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths7] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths8] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths9] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths10] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths11] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths12] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths13] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths14] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths15] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths16] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths17] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths18] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths19] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths0] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths1] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths2] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths3] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths4] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths5] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths6] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths7] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths8] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths9] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths10] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths11] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths12] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths13] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths14] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths15] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths16] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths17] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths18] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths19] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths0] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths1] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths2] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths3] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths4] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths5] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths6] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths7] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths8] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths9] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths10] PASSED [ 78%] 1307s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths11] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths12] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths13] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths14] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths15] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths16] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths17] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths18] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths19] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths0] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths1] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths2] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths3] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths4] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths5] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths6] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths7] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths8] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths9] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths10] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths11] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths12] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths13] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths14] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths15] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths16] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths17] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths18] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths19] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths0] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths1] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths2] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths3] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths4] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths5] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths6] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths7] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths8] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths9] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths10] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths11] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths12] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths13] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths14] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths15] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths16] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths17] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths18] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths19] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths0] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths1] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths2] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths3] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths4] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths5] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths6] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths7] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths8] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths9] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths10] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths11] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths12] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths13] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths14] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths15] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths16] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths17] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths18] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths19] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths0] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths1] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths2] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths3] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths4] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths5] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths6] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths7] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths8] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths9] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths10] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths11] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths12] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths13] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths14] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths15] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths16] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths17] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths18] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths19] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths0] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths1] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths2] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths3] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths4] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths5] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths6] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths7] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths8] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths9] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths10] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths11] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths12] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths13] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths14] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths15] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths16] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths17] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths18] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths19] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths0] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths1] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths2] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths3] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths4] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths5] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths6] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths7] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths8] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths9] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths10] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths11] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths12] PASSED [ 78%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths13] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths14] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths15] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths16] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths17] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths18] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths19] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths0] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths1] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths2] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths3] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths4] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths5] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths6] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths7] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths8] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths9] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths10] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths11] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths12] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths13] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths14] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths15] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths16] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths17] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths18] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths19] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths0] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths1] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths2] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths3] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths4] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths5] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths6] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths7] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths8] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths9] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths10] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths11] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths12] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths13] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths14] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths15] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths16] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths17] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths18] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths19] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths0] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths1] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths2] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths3] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths4] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths5] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths6] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths7] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths8] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths9] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths10] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths11] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths12] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths13] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths14] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths15] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths16] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths17] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths18] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths19] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths0] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths1] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths2] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths3] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths4] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths5] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths6] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths7] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths8] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths9] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths10] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths11] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths12] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths13] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths14] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths15] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths16] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths17] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths18] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths19] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths0] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths1] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths2] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths3] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths4] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths5] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths6] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths7] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths8] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths9] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths10] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths11] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths12] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths13] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths14] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths15] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths16] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths17] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths18] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths19] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths0] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths1] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths2] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths3] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths4] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths5] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths6] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths7] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths8] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths9] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths10] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths11] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths12] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths13] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths14] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths15] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths16] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths17] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths18] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths19] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths0] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths1] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths2] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths3] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths4] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths5] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths6] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths7] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths8] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths9] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths10] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths11] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths12] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths13] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths14] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths15] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths16] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths17] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths18] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths19] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths0] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths1] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths2] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths3] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths4] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths5] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths6] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths7] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths8] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths9] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths10] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths11] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths12] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths13] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths14] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths15] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths16] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths17] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths18] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths19] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths0] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths1] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths2] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths3] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths4] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths5] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths6] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths7] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths8] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths9] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths10] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths11] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths12] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths13] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths14] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths15] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths16] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths17] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths18] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths19] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths0] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths1] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths2] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths3] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths4] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths5] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths6] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths7] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths8] PASSED [ 79%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths9] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths10] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths11] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths12] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths13] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths14] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths15] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths16] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths17] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths18] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths19] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths0] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths1] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths2] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths3] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths4] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths5] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths6] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths7] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths8] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths9] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths10] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths11] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths12] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths13] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths14] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths15] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths16] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths17] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths18] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths19] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths0] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths1] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths2] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths3] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths4] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths5] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths6] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths7] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths8] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths9] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths10] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths11] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths12] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths13] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths14] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths15] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths16] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths17] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths18] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths19] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths0] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths1] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths2] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths3] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths4] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths5] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths6] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths7] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths8] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths9] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths10] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths11] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths12] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths13] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths14] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths15] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths16] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths17] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths18] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths19] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths0] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths1] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths2] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths3] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths4] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths5] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths6] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths7] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths8] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths9] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths10] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths11] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths12] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths13] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths14] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths15] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths16] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths17] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths18] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths19] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths0] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths1] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths2] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths3] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths4] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths5] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths6] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths7] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths8] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths9] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths10] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths11] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths12] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths13] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths14] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths15] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths16] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths17] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths18] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths19] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths0] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths1] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths2] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths3] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths4] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths5] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths6] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths7] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths8] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths9] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths10] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths11] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths12] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths13] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths14] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths15] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths16] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths17] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths18] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths19] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape0] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape1] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape2] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape3] PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_return_value PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_single_atom_no_bonds PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_empty_ag PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_scrambled_ag PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_out_of_place PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_double_precision_box PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_no_bonds PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_zero_box_size PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_wrong_reference_atom PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_impossible_solve PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_1 PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_2 PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_3 PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_4 PASSED [ 80%] 1308s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_double_frag_short_bonds PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_make_whole_triclinic PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_make_whole_fullerene PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_make_whole_multiple_molecules PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val1_lookup PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val1_inject PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val2_lookup PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val2_inject PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val3_set PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val3_del PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val4_args PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val5_kwargs PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val6_universe_validation PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_float[0.45-0.45] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_float[.45-0.45] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_float[a.b-a.b] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_map[input0-output0] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_map[input1-output1] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_keys PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_ValueError PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_usage[0.1-4.0-5.0-10-0.1-4.0-5.0] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_usage[0.4-4.0-5.0-3-0.4-3.9-5.1] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[None-None] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[mass-result1] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[weights2-result2] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[weights3-result3] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[weights4-result4] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[42] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[geometry] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights2] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights3] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights4] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights5] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights6] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[CHAIN] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[CONFIG] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[CRD] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[DATA] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[DCD] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[DMS] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[GMS] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[GRO] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[HISTORY] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[INPCRD] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[LAMMPS] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[MDCRD] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[MMTF] PASSED [ 80%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[MOL2] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[NC] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[NCDF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PDB] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PDBQT] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PRMTOP] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PQR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PSF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[RESTRT] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TOP] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TPR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TRJ] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TRR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XML] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XPDB] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XTC] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XYZ] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TRZ] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[chain] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[config] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[crd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[data] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[dcd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[dms] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[gms] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[gro] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[history] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[inpcrd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[lammps] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[mdcrd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[mmtf] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[mol2] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[nc] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[ncdf] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[pdb] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[pdbqt] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[prmtop] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[pqr] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[psf] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[restrt] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[top] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[tpr] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[trj] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[trr] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xml] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xpdb] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xtc] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xyz] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[trz] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[CHAIN] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[CONFIG] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[CRD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[DATA] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[DCD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[DMS] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[GMS] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[GRO] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[HISTORY] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[INPCRD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[LAMMPS] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[MDCRD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[MMTF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[MOL2] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[NC] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[NCDF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PDB] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PDBQT] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PRMTOP] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PQR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PSF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[RESTRT] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TOP] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TPR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TRJ] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TRR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XML] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XPDB] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XTC] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XYZ] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TRZ] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[chain] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[config] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[crd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[data] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[dcd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[dms] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[gms] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[gro] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[history] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[inpcrd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[lammps] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[mdcrd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[mmtf] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[mol2] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[nc] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[ncdf] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[pdb] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[pdbqt] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[prmtop] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[pqr] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[psf] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[restrt] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[top] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[tpr] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[trj] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[trr] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xml] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xpdb] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xtc] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xyz] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[trz] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-CHAIN] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-CONFIG] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-CRD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-DATA] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-DCD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-DMS] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-GMS] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-GRO] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-HISTORY] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-INPCRD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-LAMMPS] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-MDCRD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-MMTF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-MOL2] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-NC] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-NCDF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PDB] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PDBQT] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PRMTOP] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PQR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PSF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-RESTRT] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TOP] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TPR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TRJ] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TRR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XML] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XPDB] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XTC] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XYZ] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TRZ] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-chain] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-config] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-crd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-data] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-dcd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-dms] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-gms] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-gro] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-history] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-inpcrd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-lammps] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-mdcrd] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-mmtf] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-mol2] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-nc] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-ncdf] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-pdb] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-pdbqt] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-prmtop] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-pqr] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-psf] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-restrt] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-top] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-tpr] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-trj] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-trr] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xml] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xpdb] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xtc] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xyz] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-trz] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-CHAIN] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-CONFIG] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-CRD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-DATA] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-DCD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-DMS] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-GMS] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-GRO] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-HISTORY] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-INPCRD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-LAMMPS] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-MDCRD] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-MMTF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-MOL2] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-NC] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-NCDF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PDB] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PDBQT] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PRMTOP] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PQR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PSF] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-RESTRT] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TOP] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TPR] PASSED [ 81%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TRJ] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TRR] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XML] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XPDB] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XTC] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XYZ] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TRZ] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-chain] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-config] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-crd] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-data] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-dcd] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-dms] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-gms] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-gro] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-history] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-inpcrd] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-lammps] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-mdcrd] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-mmtf] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-mol2] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-nc] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-ncdf] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-pdb] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-pdbqt] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-prmtop] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-pqr] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-psf] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-restrt] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-top] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-tpr] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-trj] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-trr] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xml] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xpdb] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xtc] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xyz] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-trz] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[CHAIN] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[CONFIG] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[CRD] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[DATA] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[DCD] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[DMS] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[GMS] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[GRO] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[HISTORY] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[INPCRD] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[LAMMPS] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[MDCRD] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[MMTF] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[MOL2] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[NC] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[NCDF] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PDB] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PDBQT] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PRMTOP] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PQR] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PSF] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[RESTRT] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TOP] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TPR] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TRJ] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TRR] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XML] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XPDB] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XTC] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XYZ] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TRZ] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[chain] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[config] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[crd] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[data] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[dcd] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[dms] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[gms] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[gro] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[history] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[inpcrd] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[lammps] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[mdcrd] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[mmtf] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[mol2] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[nc] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[ncdf] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[pdb] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[pdbqt] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[prmtop] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[pqr] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[psf] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[restrt] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[top] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[tpr] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[trj] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[trr] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xml] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xpdb] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xtc] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xyz] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[trz] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-CHAIN] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-CONFIG] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-CRD] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-DATA] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-DCD] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-DMS] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-GMS] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-GRO] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-HISTORY] PASSED [ 82%] 1309s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-INPCRD] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-LAMMPS] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-MDCRD] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-MMTF] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-MOL2] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-NC] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-NCDF] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PDB] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PDBQT] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PRMTOP] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PQR] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PSF] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-RESTRT] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TOP] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TPR] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TRJ] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TRR] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XML] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XPDB] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XTC] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XYZ] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TRZ] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-chain] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-config] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-crd] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-data] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-dcd] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-dms] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-gms] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-gro] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-history] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-inpcrd] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-lammps] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-mdcrd] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-mmtf] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-mol2] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-nc] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-ncdf] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-pdb] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-pdbqt] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-prmtop] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-pqr] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-psf] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-restrt] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-top] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-tpr] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-trj] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-trr] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xml] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xpdb] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xtc] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xyz] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-trz] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-CHAIN] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-CONFIG] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-CRD] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-DATA] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-DCD] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-DMS] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-GMS] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-GRO] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-HISTORY] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-INPCRD] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-LAMMPS] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-MDCRD] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-MMTF] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-MOL2] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-NC] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-NCDF] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PDB] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PDBQT] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PRMTOP] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PQR] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PSF] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-RESTRT] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TOP] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TPR] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TRJ] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TRR] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XML] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XPDB] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XTC] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XYZ] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TRZ] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-chain] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-config] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-crd] PASSED [ 82%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-data] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-dcd] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-dms] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-gms] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-gro] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-history] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-inpcrd] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-lammps] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-mdcrd] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-mmtf] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-mol2] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-nc] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-ncdf] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-pdb] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-pdbqt] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-prmtop] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-pqr] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-psf] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-restrt] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-top] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-tpr] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-trj] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-trr] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xml] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xpdb] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xtc] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xyz] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-trz] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[CHAIN-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[CONFIG-ConfigParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[CRD-CRDParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[DATA-DATAParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[DCD-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[DMS-DMSParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[GMS-GMSParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[GRO-GROParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[HISTORY-HistoryParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[INPCRD-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[LAMMPS-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[MDCRD-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[MMTF-MMTFParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[MOL2-MOL2Parser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[NC-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[NCDF-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PDB-PDBParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PDBQT-PDBQTParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PRMTOP-TOPParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PQR-PQRParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PSF-PSFParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[RESTRT-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TOP-TOPParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TPR-TPRParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TRJ-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TRR-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XML-HoomdXMLParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XPDB-ExtendedPDBParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XTC-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XYZ-XYZParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TRZ-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-CHAIN-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-CONFIG-ConfigParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-CRD-CRDParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-DATA-DATAParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-DCD-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-DMS-DMSParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-GMS-GMSParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-GRO-GROParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-HISTORY-HistoryParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-INPCRD-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-LAMMPS-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-MDCRD-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-MMTF-MMTFParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-MOL2-MOL2Parser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-NC-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-NCDF-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PDB-PDBParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PDBQT-PDBQTParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PRMTOP-TOPParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PQR-PQRParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PSF-PSFParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-RESTRT-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TOP-TOPParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TPR-TPRParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TRJ-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TRR-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XML-HoomdXMLParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XPDB-ExtendedPDBParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XTC-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XYZ-XYZParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TRZ-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-CHAIN-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-CONFIG-ConfigParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-CRD-CRDParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-DATA-DATAParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-DCD-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-DMS-DMSParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-GMS-GMSParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-GRO-GROParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-HISTORY-HistoryParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-INPCRD-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-LAMMPS-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-MDCRD-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-MMTF-MMTFParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-MOL2-MOL2Parser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-NC-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-NCDF-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PDB-PDBParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PDBQT-PDBQTParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PRMTOP-TOPParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PQR-PQRParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PSF-PSFParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-RESTRT-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TOP-TOPParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TPR-TPRParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TRJ-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TRR-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XML-HoomdXMLParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XPDB-ExtendedPDBParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XTC-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XYZ-XYZParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TRZ-MinimalParser] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_invalid[extention0] SKIPPED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[CHAIN-ChainReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[CONFIG-ConfigReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[CRD-CRDReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[DATA-DATAReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[DCD-DCDReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[DMS-DMSReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[GMS-GMSReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[GRO-GROReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[HISTORY-HistoryReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[INPCRD-INPReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[LAMMPS-DCDReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[MDCRD-TRJReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[MMTF-MMTFReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[MOL2-MOL2Reader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[NC-NCDFReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[NCDF-NCDFReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[PDB-PDBReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[PDBQT-PDBQTReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[PQR-PQRReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[RESTRT-INPReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[TRJ-TRJReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[TRR-TRRReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[XPDB-ExtendedPDBReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[XTC-XTCReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[XYZ-XYZReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[TRZ-TRZReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-CHAIN-ChainReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-CONFIG-ConfigReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-CRD-CRDReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-DATA-DATAReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-DCD-DCDReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-DMS-DMSReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-GMS-GMSReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-GRO-GROReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-HISTORY-HistoryReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-INPCRD-INPReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-LAMMPS-DCDReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-MDCRD-TRJReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-MMTF-MMTFReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-MOL2-MOL2Reader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-NC-NCDFReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-NCDF-NCDFReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-PDB-PDBReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-PDBQT-PDBQTReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-PQR-PQRReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-RESTRT-INPReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-TRJ-TRJReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-TRR-TRRReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-XPDB-ExtendedPDBReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-XTC-XTCReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-XYZ-XYZReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-TRZ-TRZReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-CHAIN-ChainReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-CONFIG-ConfigReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-CRD-CRDReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-DATA-DATAReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-DCD-DCDReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-DMS-DMSReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-GMS-GMSReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-GRO-GROReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-HISTORY-HistoryReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-INPCRD-INPReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-LAMMPS-DCDReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-MDCRD-TRJReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-MMTF-MMTFReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-MOL2-MOL2Reader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-NC-NCDFReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-NCDF-NCDFReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-PDB-PDBReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-PDBQT-PDBQTReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-PQR-PQRReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-RESTRT-INPReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-TRJ-TRJReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-TRR-TRRReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-XPDB-ExtendedPDBReader] PASSED [ 83%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-XTC-XTCReader] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-XYZ-XYZReader] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-TRZ-TRZReader] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention0] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention1] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention2] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention3] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention4] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_check_compressed_format_TypeError PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_format_from_filename_TypeError PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_stream_ValueError PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_from_ndarray PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestUniqueRows::test_unique_rows_2 PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestUniqueRows::test_unique_rows_3 PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestUniqueRows::test_unique_rows_with_view PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_no_filename_argument PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_precedence PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_missing_extension PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_extension_empty_string PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_file_no_extension PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_wrong_format PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_compressed_extension PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_compressed_extension_fail PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_non_string_filename PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_failure PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_nonsense PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[CRD-CRDWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[DATA-DATAWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[DCD-DCDWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[GRO-GROWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[LAMMPS-DCDWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[MOL2-MOL2Writer] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[NCDF-NCDFWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[NULL-NullWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[PDBQT-PDBQTWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[PQR-PQRWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[TRR-TRRWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[XTC-XTCWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[XYZ-XYZWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[TRZ-TRZWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe_fails[format0] SKIPPED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[DCD-DCDWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[LAMMPS-DCDWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[MOL2-MOL2Writer] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[NCDF-NCDFWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[NULL-NullWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[TRR-TRRWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[XTC-XTCWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[XYZ-XYZWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[TRZ-TRZWriter] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[CRD] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[DATA] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[GRO] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[PDBQT] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[PQR] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_get_writer_for_pdb PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_1 PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_2 PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_3 PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_4 PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_ValueError PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::test_group_same_or_consecutive_integers[arr0-answer0] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::test_group_same_or_consecutive_integers[arr1-answer1] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::test_group_same_or_consecutive_integers[arr2-answer2] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getitem PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getitem_KeyError PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_setitem PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_delitem PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_delitem_AttributeError PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_setattr PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getattr PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getattr_AttributeError PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_delattr PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_eq PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_len PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_iter PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a0-4] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a1-34] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a2-234] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a3-1234] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a4-1234] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestFlattenDict::test_flatten_dict PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestStaticVariables::test_static_variables PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_once_outer PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warned_state_restored_on_failure PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_once_inner PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_multiple_references PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_unnamed PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_fails_for_non_groupmethods PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_filter_duplicate_with_userwarning PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_default_options PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-True-True] PASSED [ 84%] 1310s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-True-False] PASSED [ 84%] 1311s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-False-True] PASSED [ 84%] 1311s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-False-False] PASSED [ 84%] 1311s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-True-True] PASSED [ 84%] 1311s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-True-False] PASSED [ 84%] 1311s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-False-True] PASSED [ 84%] 1311s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-False-False] PASSED [ 84%] 1311s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-True-True] PASSED [ 84%] 1311s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-True-False] PASSED [ 84%] 1311s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-False-True] PASSED [ 84%] 1311s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-False-False] PASSED [ 84%] 1312s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-True-True] PASSED [ 84%] 1312s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-True-False] PASSED [ 84%] 1312s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-False-True] PASSED [ 84%] 1312s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-False-False] PASSED [ 84%] 1312s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-True-True] PASSED [ 84%] 1312s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-True-False] PASSED [ 84%] 1312s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-False-True] PASSED [ 84%] 1312s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-False-False] PASSED [ 84%] 1312s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-True-True] PASSED [ 84%] 1313s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-True-False] PASSED [ 84%] 1313s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-False-True] PASSED [ 84%] 1313s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-False-False] PASSED [ 84%] 1313s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-True-True] PASSED [ 84%] 1313s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-True-False] PASSED [ 84%] 1313s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-False-True] PASSED [ 84%] 1313s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-False-False] PASSED [ 84%] 1313s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-True-True] PASSED [ 84%] 1313s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-True-False] PASSED [ 84%] 1313s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-False-True] PASSED [ 84%] 1314s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-False-False] PASSED [ 84%] 1314s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-True-True] PASSED [ 84%] 1314s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-True-False] PASSED [ 84%] 1314s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-False-True] PASSED [ 84%] 1314s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-False-False] PASSED [ 84%] 1314s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-True-True] PASSED [ 84%] 1314s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-True-False] PASSED [ 84%] 1314s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-False-True] PASSED [ 84%] 1314s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-False-False] PASSED [ 84%] 1315s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-True-True] PASSED [ 84%] 1315s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-True-False] PASSED [ 84%] 1315s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-False-True] PASSED [ 84%] 1315s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-False-False] PASSED [ 84%] 1315s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-True-True] PASSED [ 84%] 1315s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-True-False] PASSED [ 84%] 1316s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-False-True] PASSED [ 84%] 1316s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-False-False] PASSED [ 84%] 1316s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-True-True] PASSED [ 84%] 1316s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-True-False] PASSED [ 84%] 1316s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-False-True] PASSED [ 84%] 1316s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-False-False] PASSED [ 84%] 1316s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-True-True] PASSED [ 84%] 1317s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-True-False] PASSED [ 84%] 1317s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-False-True] PASSED [ 84%] 1317s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-False-False] PASSED [ 84%] 1317s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-True-True] PASSED [ 84%] 1317s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-True-False] PASSED [ 84%] 1317s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-False-True] PASSED [ 84%] 1317s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-False-False] PASSED [ 84%] 1317s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-True-True] PASSED [ 84%] 1317s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-True-False] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-False-True] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-False-False] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup_not_allowed PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup_not_allowed_default PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_enforce_copy PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_allow_single PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_convert_single PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_reduce_result_if_single PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_check_lengths_match PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup_mismatched_lengths PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_invalid_input PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_usage_with_kwargs PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_wrong_func_call PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_wrong_decorator_usage PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-None-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-None-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-Multiverse-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-None-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-None-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-Multiverse-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-None-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-None-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-Multiverse-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-None-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-None-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-Multiverse-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-None-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-None-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-Multiverse-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-None-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-None-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-Multiverse-None] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate_missing_release_ValueError PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_set_function_name PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[one line text] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[ one line with leading space] PASSED [ 84%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[multiline\n\n with some\n leading space] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[ multiline\n\n with all\n leading space] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box0] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box1] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box2] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box3] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box4] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box5] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box6] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box7] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_None PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box0] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box1] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box2] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box3] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box4] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box5] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box6] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box7] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_wrong_data PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_wrong_shape PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestStoreInitArguments::test_store_arguments_default PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::TestStoreInitArguments::test_store_arguments_withkwargs PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_which PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_is_installed[math-True] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_is_installed[sys-True] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/lib/test_util.py::test_is_installed[some_weird_module_name-False] PASSED [ 85%] 1318s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u0] FAILED [ 85%] 1319s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u1] FAILED [ 85%] 1319s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u2] FAILED [ 85%] 1319s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u3] FAILED [ 85%] 1319s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u4] FAILED [ 85%] 1319s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u5] FAILED [ 85%] 1319s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u6] FAILED [ 85%] 1319s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u7] FAILED [ 85%] 1319s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u8] FAILED [ 85%] 1319s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u9] FAILED [ 85%] 1321s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u10] FAILED [ 85%] 1324s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u11] FAILED [ 85%] 1325s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u12] FAILED [ 85%] 1325s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u13] FAILED [ 85%] 1325s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u14] FAILED [ 85%] 1325s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_universe_unpickle_in_new_process FAILED [ 85%] 1325s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_creating_multiple_universe_without_offset FAILED [ 85%] 1325s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader0] PASSED [ 85%] 1325s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader1] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader2] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader3] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader4] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader5] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader6] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader7] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader8] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader9] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader10] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader11] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader12] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader13] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader14] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader15] PASSED [ 85%] 1326s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader16] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader17] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader18] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader19] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader20] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader21] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader22] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader23] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader24] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader25] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader26] PASSED [ 85%] 1327s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader27] PASSED [ 85%] 1329s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader28] PASSED [ 85%] 1332s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader29] PASSED [ 85%] 1332s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader30] PASSED [ 85%] 1333s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_analysis_pickle PASSED [ 85%] 1333s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_fit_translation_pickle[u0] PASSED [ 85%] 1333s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_fit_rot_trans_pickle[u0] PASSED [ 85%] 1333s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_PositionAverager_pickle[u0] PASSED [ 85%] 1333s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_rotateby_pickle[u0] PASSED [ 85%] 1333s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_translate_pickle[u0] PASSED [ 85%] 1333s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_center_in_box_pickle[u0] PASSED [ 85%] 1333s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_wrap_pickle[u0] PASSED [ 85%] 1333s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_unwrap_pickle[u0] PASSED [ 85%] 1333s testsuite/MDAnalysisTests/test_api.py::test_Universe PASSED [ 85%] 1333s testsuite/MDAnalysisTests/test_api.py::test_Writer PASSED [ 85%] 1333s testsuite/MDAnalysisTests/test_api.py::test_AtomGroup PASSED [ 85%] 1333s testsuite/MDAnalysisTests/test_api.py::test_ResidueGroup PASSED [ 85%] 1333s testsuite/MDAnalysisTests/test_api.py::test_SegmentGroup PASSED [ 85%] 1333s testsuite/MDAnalysisTests/test_api.py::test_all_import[] PASSED [ 85%] 1333s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.data] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.dssp] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.encore] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.encore.clustering] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.encore.dimensionality_reduction] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.hbonds] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.hydrogenbonds] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.legacy] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.auxiliary] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.converters] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.coordinates] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.core] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.guesser] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.formats] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.formats.include] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.formats.src] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.include] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.libmdanalysis] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.src.transformations] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.selections] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.tests] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.topology] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.topology.tpr] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.transformations] PASSED [ 85%] 1334s testsuite/MDAnalysisTests/test_api.py::test_all_import[.visualization] PASSED [ 85%] 1335s testsuite/MDAnalysisTests/topology/test_altloc.py::test_atomgroups PASSED [ 85%] 1337s testsuite/MDAnalysisTests/topology/test_altloc.py::test_bonds PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_altloc.py::test_write_read PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_output PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_mandatory_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_expected_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_no_unexpected_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_size PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_tt_size PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_creates_universe PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_guessed_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_guessed_masses PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_guessed_types PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_output PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_mandatory_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_expected_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_no_unexpected_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_size PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_tt_size PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_creates_universe PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_guessed_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_guesssed_masses PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_guessed_types PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_names PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_output PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_mandatory_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_expected_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_no_unexpected_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_size PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_tt_size PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_creates_universe PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_guessed_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_guesssed_masses PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_guessed_types PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_names PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_output PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_mandatory_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_expected_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_no_unexpected_attributes PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_size PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_tt_size PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_creates_universe PASSED [ 85%] 1339s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_guessed_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_dlp_names PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_output PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_mandatory_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_expected_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_no_unexpected_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_size PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_tt_size PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_creates_universe PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_guessed_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_dlp_names PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_output PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_mandatory_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_expected_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_no_unexpected_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_size PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_tt_size PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_creates_universe PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_guessed_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_dlp_names PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_output PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_mandatory_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_expected_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_no_unexpected_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_size PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_tt_size PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_creates_universe PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_guessed_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_dlp_names PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_output PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_mandatory_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_expected_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_no_unexpected_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_size PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_tt_size PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_creates_universe PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_guessed_attributes PASSED [ 85%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_dlp_names PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dlpoly.py::test_HISTORY_EOFError PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_output PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_mandatory_attributes PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_expected_attributes PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_no_unexpected_attributes PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_size PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_tt_size PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_creates_universe PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_guessed_attributes PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_number_of_bonds PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_atomsels PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_guessed_types PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_output PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_mandatory_attributes PASSED [ 86%] 1340s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_expected_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_no_unexpected_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_size PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_tt_size PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_creates_universe PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_guessed_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_number_of_bonds PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_guessed_types PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_atomsels PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_output PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_mandatory_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_expected_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_no_unexpected_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_size PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_tt_size PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_creates_universe PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_guessed_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_names PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_guessed_types PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_guessed_masses PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_elements PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_output PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_mandatory_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_expected_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_no_unexpected_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_size PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_tt_size PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_creates_universe PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_guessed_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_names PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_types PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_guessed_masses PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_guessed_types PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_output PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_mandatory_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_expected_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_no_unexpected_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_size PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_tt_size PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_creates_universe PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_guessed_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_names PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_types PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_output PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_mandatory_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_expected_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_no_unexpected_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_size PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_tt_size PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_creates_universe PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_guessed_attributes PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_names PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_types PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_guessed_masses PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_guessed_types PASSED [ 86%] 1341s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_output PASSED [ 86%] 1342s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_mandatory_attributes PASSED [ 86%] 1342s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_expected_attributes PASSED [ 86%] 1342s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_no_unexpected_attributes PASSED [ 86%] 1342s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_size PASSED [ 86%] 1342s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_tt_size PASSED [ 86%] 1342s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_creates_universe PASSED [ 86%] 1343s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_guessed_attributes PASSED [ 86%] 1343s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_attr_size PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_guessed_masses PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_guessed_types PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROWideBox::test_atoms PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gro.py::test_parse_empty_atom_IOerror PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gro.py::test_parse_missing_atomname_IOerror PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gro.py::TestGroResidWrapping::test_wrapping_resids[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/residwrap.gro-resids0] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gro.py::TestGroResidWrapping::test_wrapping_resids[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/residwrap_0base.gro-resids1] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gro.py::test_sameresid_diffresname PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_output PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_mandatory_attributes PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_expected_attributes PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_no_unexpected_attributes PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_size PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_tt_size PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_creates_universe PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_guessed_attributes PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_attr_size PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_atoms PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_bonds PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_angles PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_dihedrals PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_impropers PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_output PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_mandatory_attributes PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_expected_attributes PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_no_unexpected_attributes PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_size PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_tt_size PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_creates_universe PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_guessed_attributes PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_attr_size PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_atoms PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_bonds PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_angles PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_dihedrals PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_impropers PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_bonds_identity PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_angles_identity PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_dihedrals_identity PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_masses PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_masses_warn PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_masses_miss PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_get_atom_mass[H-1.008] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_get_atom_mass[XYZ-0.0] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_atom_mass PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_types PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element_empty PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element_singledigit PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element_1H PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[AO5*-O] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[F--F] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[HB1-H] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[OC2-O] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[1he2-H] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[3hg2-H] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[OH--O] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[HO-H] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[he-H] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[zn-ZN] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[Ca2+-CA] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[CA-C] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[N0A-N] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[C0U-C] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[C0S-C] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[Na+-NA] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[Cu2+-CU] PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_charge PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_Error PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_impropers PASSED [ 86%] 1344s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_water PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_adk PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_peptide PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[c1ccccc1] SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[C1=CC=CC=C1] SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[CCO] SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[c1ccccc1Cc1ccccc1] SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[c1ccccc1] SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[C1=CC=CC=C1] SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[CCO] SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[c1ccccc1Cc1ccccc1] SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_masses-arg0] PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[validate_atom_types-arg1] PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_types-arg2] PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_type-CA] PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_element-CA] PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[get_atom_mass-C] PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_mass-CA] PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_charge-CA] PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_bonds_deprecations PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_angles_dihedral_deprecations PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_rdkit_guessers_deprecations SKIPPED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_output PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_mandatory_attributes PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_expected_attributes PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_no_unexpected_attributes PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_size PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_tt_size PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_creates_universe PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_guessed_attributes PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_attr_size PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_bonds PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_angles PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_dihedrals PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_impropers PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_bonds_identity PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_angles_identity PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_dihedrals_identity PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_read_masses PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_read_charges PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_output PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_mandatory_attributes PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_expected_attributes PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_no_unexpected_attributes PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_size PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_tt_size PASSED [ 86%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_creates_universe PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_guessed_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_atom_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_values PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_type PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_atom_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_values PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_type PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_atom_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_multiple_types PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_values PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_type PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_atom_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_values PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_type PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_output PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_mandatory_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_expected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_no_unexpected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_tt_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_creates_universe PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_guessed_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_mass_guess PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_output PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_mandatory_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_expected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_no_unexpected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_tt_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_creates_universe PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_guessed_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_charge_parse PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_mass_parse_or_guess PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_output PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_mandatory_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_expected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_no_unexpected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_tt_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_creates_universe PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_guessed_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_charge_parse PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_masses_are_read PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_output PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_mandatory_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_expected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_no_unexpected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_tt_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_creates_universe PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_guessed_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_bonds_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_angles_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_dihedrals_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_impropers_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_no_extra_angles PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_bonds_atom_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_dihedrals_atom_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_dihedrals_identity PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_output PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_mandatory_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_expected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_no_unexpected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_tt_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_creates_universe PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_guessed_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_bonds_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_angles_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_dihedrals_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_impropers_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_whether_settles_types PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_bonds_values PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_defines PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_guessed_masses PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_output PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_mandatory_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_expected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_no_unexpected_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_tt_size PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_creates_universe PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_guessed_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_bonds_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_angles_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_dihedrals_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_impropers_total_counts PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_bonds_values PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_guessed_masses PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_whether_settles_types PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_angles_values PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_defines PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_kwargs_overrides_defines PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_output PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_mandatory_attributes PASSED [ 87%] 1345s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_expected_attributes PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_no_unexpected_attributes PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_size PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_tt_size PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_creates_universe PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_guessed_attributes PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_bonds_total_counts PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_angles_total_counts PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_dihedrals_total_counts PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_impropers_total_counts PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_heavy_atom PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_mandatory_attributes PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_expected_attributes PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_no_unexpected_attributes PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_size PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_tt_size PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_bonds_total_counts PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_angles_total_counts PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_dihedrals_total_counts PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_impropers_total_counts PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_output PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_creates_universe PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_guessed_attributes PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_sequential PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestErrors::test_no_include PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestErrors::test_missing_endif PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestRelativePath::test_relstring PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestRelativePath::test_relpath PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::TestRelativePath::test_relative_path PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::test_missing_elements_no_attribute PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::test_elements_deprecation_warning PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_itp.py::test_elements_nodeprecation_warning PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_output PASSED [ 87%] 1346s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_mandatory_attributes PASSED [ 87%] 1347s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_expected_attributes PASSED [ 87%] 1347s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_no_unexpected_attributes PASSED [ 87%] 1347s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_size PASSED [ 87%] 1347s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_tt_size PASSED [ 87%] 1347s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_atom_types PASSED [ 87%] 1348s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_bonds PASSED [ 87%] 1348s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_bond_member PASSED [ 87%] 1348s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_angles PASSED [ 87%] 1348s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_angle_member PASSED [ 87%] 1349s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_dihedrals PASSED [ 87%] 1349s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_dihedral_member PASSED [ 87%] 1349s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_impropers PASSED [ 87%] 1349s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_improper_member PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_creates_universe PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_guessed_attributes PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_atom_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_atom_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_bond_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_bond_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_angles[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_angles[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_angle_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_angle_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_dihedrals[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1350s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_dihedrals[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_dihedral_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_dihedral_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_impropers[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_impropers[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_improper_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_improper_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_atom_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_atom_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_bond_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_bond_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_angles[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_angles[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_angle_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_angle_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_dihedrals[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_dihedrals[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_dihedral_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_dihedral_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_impropers[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_impropers[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_improper_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_improper_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_output PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_mandatory_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_expected_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_no_unexpected_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_size PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_tt_size PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_atom_types PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_bonds PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_bond_member PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_angles PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_angle_member PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_dihedrals PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_dihedral_member PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_impropers PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_improper_member PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_creates_universe PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_guessed_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_atom_ids PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_traj PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_output PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_mandatory_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_expected_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_no_unexpected_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_size PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_tt_size PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_atom_types PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_bonds PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_bond_member PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_angles PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_angle_member PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_dihedrals PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_dihedral_member PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_impropers PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_improper_member PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_creates_universe PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_guessed_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_noresid PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_noresid_failure PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_interpret_atom_style PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_interpret_atom_style_missing PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_output PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_mandatory_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_expected_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_no_unexpected_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_size PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_tt_size PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_creates_universe PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_masses_warning PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_guessed_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_id_ordering PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_guessed_masses PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_guessed_types PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_output PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_mandatory_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_expected_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_no_unexpected_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_size PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_tt_size PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_creates_universe PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_masses_warning PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_guessed_attributes PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_id_ordering PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_guessed_masses PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_guessed_types PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/test.inpcrd-5] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd-12421] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/bala.ncdf-2661] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.trr-47681] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc-47681] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[filename6-10] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/test.inpcrd-5] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd-12421] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/bala.ncdf-2661] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.trr-47681] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc-47681] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[filename6-10] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser_fail[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.mdcrd-252] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser_fail[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/bala.trj-2661] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser_fail[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trzfile.trz-8184] PASSED [ 88%] 1351s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_n_atoms_kwarg[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.mdcrd-252] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_n_atoms_kwarg[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/bala.trj-2661] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_n_atoms_kwarg[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trzfile.trz-8184] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array0-fac] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array1-fca] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array2-afc] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array3-acf] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array4-cfa] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array5-caf] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array0-fac] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array1-fca] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array2-afc] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array3-acf] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array4-cfa] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array5-caf] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_output PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_mandatory_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_expected_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_no_unexpected_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_size PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_tt_size PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_creates_universe PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_guessed_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_output PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_mandatory_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_expected_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_no_unexpected_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_size PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_tt_size PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_creates_universe PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_guessed_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_output PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_mandatory_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_expected_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_no_unexpected_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_size PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_tt_size PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_creates_universe PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_guessed_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_output PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_mandatory_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_expected_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_no_unexpected_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_size PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_tt_size PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_creates_universe PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_guessed_attributes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_bonds PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_ids PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_names PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_resnames PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_segids PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_resids PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_occupancies PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_bfactors PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_types PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_models PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_icodes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_altlocs PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_guessed_masses PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_bonds PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_ids PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_names PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_resnames PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_segids PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_resids PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_occupancies PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_bfactors PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_types PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_models PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_icodes PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_altlocs PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_guessed_masses PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverse::test_models PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverse::test_universe_models PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverse::test_guessed_masses PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverseFromDecoder::test_models PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverseFromDecoder::test_universe_models PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverseFromDecoder::test_guessed_masses PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_selection PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_2 PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_3 PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_4 PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_5 PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_attr_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_attr_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_bond_orders PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_elements PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_elements_selection PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_wrong_elements_warnings PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_all_wrong_elements_warnings PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_all_elements PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_wo_optional_columns PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_partial_optional_columns PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_mol2_wo_required_columns PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_mol2_no_charges PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_unformat PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_mol2.py::test_guessed_masses PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[A0000-100000] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[MEGAN-20929695] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[J0NNY-15247214] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[DREW6-6417862] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ST3V3-31691119] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ADA8M-719798] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[a0000-43770016] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[megan-64599711] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[j0nny-58917230] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[drew6-50087878] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[st3v3-75361135] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ada8m-44389814] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 6-6] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 24-24] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 645-645] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 4951-4951] PASSED [ 89%] 1352s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[10267-10267] PASSED [ 89%] 1353s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_output PASSED [ 89%] 1353s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_mandatory_attributes PASSED [ 89%] 1353s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_expected_attributes PASSED [ 89%] 1353s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_no_unexpected_attributes PASSED [ 89%] 1354s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_size PASSED [ 89%] 1354s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_tt_size PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_creates_universe PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_guessed_attributes PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_output PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_mandatory_attributes PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_expected_attributes PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_no_unexpected_attributes PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_size PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_tt_size PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_creates_universe PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_guessed_attributes PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBConect::test_conect_parser PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBConect::test_conect_parser_runtime PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBConect::test_conect_topo_parser PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::test_conect2ter PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::test_single_conect PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::test_new_chainid_new_res PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::test_sameresid_diffresname PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_record_types PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_no_resid PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_hex PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_metals PASSED [ 89%] 1355s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_elements PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdb.py::test_missing_elements_noattribute PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdb.py::test_wrong_elements_warnings PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdb.py::test_guessed_masses_and_types_values PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdb.py::test_nobonds_error PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_charges PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_bad_charges[REMARK Invalid charge assignment - no sign for MG2+\nHETATM 1 CU CU A 1 03.000 00.000 00.000 1.00 00.00 CU2+\nHETATM 2 FE FE A 2 00.000 03.000 00.000 1.00 00.00 Fe2+\nHETATM 3 Mg Mg A 3 03.000 03.000 03.000 1.00 00.00 MG2\nEND\n-2] PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_bad_charges[REMARK Invalid charge format for MG2+\nHETATM 1 CU CU A 1 03.000 00.000 00.000 1.00 00.00 CU2+\nHETATM 2 FE FE A 2 00.000 03.000 00.000 1.00 00.00 Fe2+\nHETATM 3 Mg Mg A 3 03.000 03.000 03.000 1.00 00.00 MG+2\nEND\n-\\+2] PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_output PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_mandatory_attributes PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_expected_attributes PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_no_unexpected_attributes PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_size PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_tt_size PASSED [ 89%] 1356s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_creates_universe PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_guessed_attributes PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_guessed_masses PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pdbqt.py::test_footnote PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_output PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_mandatory_attributes PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_expected_attributes PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_no_unexpected_attributes PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_size PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_tt_size PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_creates_universe PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_guessed_attributes PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_attr_size PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_guessed_masses PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_guessed_types PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_output PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_mandatory_attributes PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_expected_attributes PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_no_unexpected_attributes PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_size PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_tt_size PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_creates_universe PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_guessed_attributes PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_attr_size PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_guessed_masses PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_guessed_types PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::test_record_types PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_pqr.py::test_gromacs_flavour PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_output[uncompressed] PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_output[bz2] PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_mandatory_attributes[uncompressed] PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_mandatory_attributes[bz2] PASSED [ 89%] 1358s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_expected_attributes[uncompressed] PASSED [ 89%] 1359s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_expected_attributes[bz2] PASSED [ 89%] 1359s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_no_unexpected_attributes[uncompressed] PASSED [ 89%] 1359s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_no_unexpected_attributes[bz2] PASSED [ 89%] 1359s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_size[uncompressed] PASSED [ 89%] 1360s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_size[bz2] PASSED [ 89%] 1360s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_tt_size[uncompressed] PASSED [ 89%] 1360s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_tt_size[bz2] PASSED [ 89%] 1360s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_creates_universe[uncompressed] PASSED [ 89%] 1361s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_creates_universe[bz2] PASSED [ 89%] 1361s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_guessed_attributes[uncompressed] PASSED [ 89%] 1361s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_guessed_attributes[bz2] PASSED [ 89%] 1361s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_total_counts[uncompressed] PASSED [ 89%] 1362s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_total_counts[bz2] PASSED [ 89%] 1362s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_atom_counts[uncompressed] PASSED [ 89%] 1362s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_atom_counts[bz2] PASSED [ 89%] 1362s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_identity[uncompressed] PASSED [ 89%] 1363s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_identity[bz2] PASSED [ 89%] 1363s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_total_counts[uncompressed] PASSED [ 89%] 1363s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_total_counts[bz2] PASSED [ 89%] 1363s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_atom_counts[uncompressed] PASSED [ 89%] 1364s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_atom_counts[bz2] PASSED [ 89%] 1364s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_identity[uncompressed] PASSED [ 89%] 1364s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_identity[bz2] PASSED [ 89%] 1364s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_total_counts[uncompressed] PASSED [ 89%] 1365s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_total_counts[bz2] PASSED [ 89%] 1365s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_atom_counts[uncompressed] PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_atom_counts[bz2] PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_identity[uncompressed] PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_identity[bz2] PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_output PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_mandatory_attributes PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_expected_attributes PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_no_unexpected_attributes PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_size PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_tt_size PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_creates_universe PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_guessed_attributes PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_output PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_mandatory_attributes PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_expected_attributes PASSED [ 89%] 1366s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_no_unexpected_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_size PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_tt_size PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_creates_universe PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_guessed_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_as_universe_resids PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_output PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_mandatory_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_expected_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_no_unexpected_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_size PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_tt_size PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_creates_universe PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_guessed_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_bonds_total_counts PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_angles_total_counts PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_dihedrals_total_counts PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_impropers_total_counts PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::test_psf_nosegid PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_psf.py::test_psf_inscode PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_tables.py::test_moved_to_guessers_warning PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_output PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_mandatory_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_expected_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_no_unexpected_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_size PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_tt_size PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_creates_universe PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_guessed_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_attr_size PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_bonds_atom_counts PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_angles_atom_counts PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_dihedrals_atom_counts PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_impropers_atom_counts PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_bonds_identity PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_angles_identity PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_dihedrals_identity PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_impropers_identity PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_angle_atoms_bonded PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_dihedral_atoms_bonded PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_improper_atoms_bonded PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_elements PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_output PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_mandatory_attributes PASSED [ 89%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_expected_attributes PASSED [ 90%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_no_unexpected_attributes PASSED [ 90%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_size PASSED [ 90%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_tt_size PASSED [ 90%] 1367s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_creates_universe PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_guessed_attributes PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_attr_size PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_bonds_atom_counts PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_angles_atom_counts PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_dihedrals_atom_counts PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_impropers_atom_counts PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_bonds_identity PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_angles_identity PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_dihedrals_identity PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_impropers_identity PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_angle_atoms_bonded PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_dihedral_atoms_bonded PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_improper_atoms_bonded PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_elements PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_chainIDs PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_output PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_mandatory_attributes PASSED [ 90%] 1368s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_expected_attributes PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_no_unexpected_attributes PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_size PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_tt_size PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_creates_universe PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_guessed_attributes PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_attr_size PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_bonds_atom_counts PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_angles_atom_counts PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_dihedrals_atom_counts PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_impropers_atom_counts PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_bonds_identity PASSED [ 90%] 1369s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_angles_identity PASSED [ 90%] 1370s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_dihedrals_identity PASSED [ 90%] 1370s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_impropers_identity PASSED [ 90%] 1370s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_angle_atoms_bonded PASSED [ 90%] 1370s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_dihedral_atoms_bonded PASSED [ 90%] 1370s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_improper_atoms_bonded PASSED [ 90%] 1370s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_elements PASSED [ 90%] 1370s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_output PASSED [ 90%] 1370s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_mandatory_attributes PASSED [ 90%] 1370s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_expected_attributes PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_no_unexpected_attributes PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_size PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_tt_size PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_creates_universe PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_guessed_attributes PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_attr_size PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_bonds_atom_counts PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_angles_atom_counts PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_dihedrals_atom_counts PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_impropers_atom_counts PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_bonds_identity PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_angles_identity PASSED [ 90%] 1371s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_dihedrals_identity PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_impropers_identity PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_angle_atoms_bonded PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_dihedral_atoms_bonded PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_improper_atoms_bonded PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_elements PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_output PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_mandatory_attributes PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_expected_attributes PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_no_unexpected_attributes PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_size PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_tt_size PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_creates_universe PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_guessed_attributes PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_attr_size PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_bonds_atom_counts PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_angles_atom_counts PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_dihedrals_atom_counts PASSED [ 90%] 1372s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_impropers_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_bonds_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_angles_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_dihedrals_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_impropers_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_angle_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_dihedral_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_improper_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_elements PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_output PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_mandatory_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_expected_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_no_unexpected_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_size PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_tt_size PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_creates_universe PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_guessed_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_attr_size PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_bonds_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_angles_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_dihedrals_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_impropers_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_bonds_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_angles_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_dihedrals_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_impropers_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_angle_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_dihedral_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_improper_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_elements PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_output PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_mandatory_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_expected_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_no_unexpected_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_size PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_tt_size PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_creates_universe PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_guessed_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_attr_size PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_bonds_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_angles_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_dihedrals_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_impropers_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_bonds_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_angles_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_dihedrals_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_impropers_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_angle_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_dihedral_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_improper_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_elements PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_output PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_mandatory_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_expected_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_no_unexpected_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_size PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_tt_size PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_creates_universe PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_guessed_attributes PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_attr_size PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_bonds_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_angles_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_dihedrals_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_impropers_atom_counts PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_bonds_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_angles_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_dihedrals_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_impropers_identity PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_angle_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_dihedral_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_improper_atoms_bonded PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_elements PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.error1.parm7-%VE Missing in header] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.error2.parm7-'TITLE' missing in header] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.error4.parm7-Invalid header line.] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/parmed_fad.prmtop-Chamber-style TOP file] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_flag_index_error PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-errmsgs0] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-errmsgs1] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/capped-ala.prmtop-errmsgs2] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.negative.parm7-errmsgs3] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ala.ff19SB.OPC.parm7.bz2-errmsgs4] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache_chainid.error5.prmtop.bz2-errmsgs5] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_base.py::TestSquash::test_squash PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_base.py::TestChangeSquash::test_resid_squash PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_base.py::TestChangeSquash::test_segid_squash PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-name] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-resname] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-type] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-segid] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-moltype] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.crd-name] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.crd-resname] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.crd-type] PASSED [ 90%] 1373s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.crd-segid] PASSED [ 90%] 1374s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.crd-moltype] PASSED [ 90%] 1374s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-name] PASSED [ 90%] 1374s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-resname] PASSED [ 90%] 1375s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-type] PASSED [ 90%] 1375s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-segid] PASSED [ 90%] 1375s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-moltype] PASSED [ 90%] 1375s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_closed.dms-name] PASSED [ 90%] 1376s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_closed.dms-resname] PASSED [ 90%] 1376s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_closed.dms-type] PASSED [ 90%] 1376s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_closed.dms-segid] PASSED [ 90%] 1376s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_closed.dms-moltype] PASSED [ 90%] 1376s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-name] PASSED [ 90%] 1376s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-resname] PASSED [ 90%] 1376s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-type] PASSED [ 90%] 1376s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-segid] PASSED [ 90%] 1376s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-moltype] PASSED [ 90%] 1376s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-name] PASSED [ 90%] 1377s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-resname] PASSED [ 90%] 1377s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-type] PASSED [ 90%] 1378s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-segid] PASSED [ 90%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-moltype] PASSED [ 90%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-name] PASSED [ 90%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-resname] PASSED [ 90%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-type] PASSED [ 90%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-segid] PASSED [ 90%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-moltype] PASSED [ 90%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/173D.mmtf-name] PASSED [ 90%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/173D.mmtf-resname] PASSED [ 90%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/173D.mmtf-type] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/173D.mmtf-segid] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/173D.mmtf-moltype] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-name] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-resname] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-type] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-segid] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-moltype] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-name] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-resname] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-type] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-segid] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-moltype] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pdb-name] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pdb-resname] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pdb-type] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pdb-segid] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pdb-moltype] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-name] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-resname] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-type] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-segid] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-moltype] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pqr-name] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pqr-resname] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pqr-type] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pqr-segid] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pqr-moltype] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-name] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-resname] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-type] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-segid] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-moltype] PASSED [ 91%] 1379s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk.psf-name] PASSED [ 91%] 1380s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk.psf-resname] PASSED [ 91%] 1380s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk.psf-type] PASSED [ 91%] 1380s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk.psf-segid] PASSED [ 91%] 1380s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk.psf-moltype] PASSED [ 91%] 1380s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/anti.top-name] PASSED [ 91%] 1380s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/anti.top-resname] PASSED [ 91%] 1380s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/anti.top-type] PASSED [ 91%] 1380s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/anti.top-segid] PASSED [ 91%] 1380s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/anti.top-moltype] PASSED [ 91%] 1380s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-name] PASSED [ 91%] 1381s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-resname] PASSED [ 91%] 1381s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-type] PASSED [ 91%] 1381s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-segid] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-moltype] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-name] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-resname] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-type] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-segid] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-moltype] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-name] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-resname] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-type] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-segid] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-moltype] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mini.xyz-name] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mini.xyz-resname] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mini.xyz-type] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mini.xyz-segid] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mini.xyz-moltype] PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_output PASSED [ 91%] 1382s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_mandatory_attributes PASSED [ 91%] 1383s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_expected_attributes PASSED [ 91%] 1383s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_no_unexpected_attributes PASSED [ 91%] 1383s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_size PASSED [ 91%] 1384s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_tt_size PASSED [ 91%] 1384s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_creates_universe PASSED [ 91%] 1385s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_guessed_attributes PASSED [ 91%] 1386s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_moltypes PASSED [ 91%] 1386s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_molnums PASSED [ 91%] 1386s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_chainIDs PASSED [ 91%] 1386s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1386s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1387s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1387s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1387s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1387s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1387s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1387s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1387s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1387s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1387s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1387s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1388s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1388s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1388s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1388s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 1388s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 1388s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 1388s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 1388s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 1388s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 1388s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 1389s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 1389s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 1389s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 1389s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1390s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1391s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1391s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1391s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1391s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1391s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1391s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 1391s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 1391s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 1391s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 1391s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1392s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1393s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1393s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1393s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1393s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1393s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1393s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1393s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1393s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1393s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1393s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1394s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1394s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 1394s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 1394s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 1394s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1395s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1396s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1397s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1397s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 1397s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 1397s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 1397s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 1397s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 1398s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 1398s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 1398s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 1398s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 1398s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 1398s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 1398s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 1398s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1398s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1399s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1400s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 1401s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 1402s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 1402s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 1402s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 1402s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 1402s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1403s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 1404s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 1405s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 1405s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 1405s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 1405s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 1405s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 1405s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 1405s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1405s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1405s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1406s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1406s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1406s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1406s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1406s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1406s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1407s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1407s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1407s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1407s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1407s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 1407s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 1407s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 1407s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 1407s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 1407s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1408s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1409s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1409s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1409s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1409s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1409s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1410s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1410s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1410s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1410s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1410s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1410s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 1410s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 1410s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 1410s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 1410s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 1411s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 1411s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 1411s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 1411s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 1411s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 1411s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 1411s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 1411s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 1411s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 1411s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1412s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1412s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1412s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1412s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1412s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1412s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1412s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1412s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1412s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1412s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 1413s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 1414s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 1414s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 1414s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 1414s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 1414s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 1414s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 1416s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 1417s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 1417s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 1417s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 1417s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 1417s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 1417s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 1417s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1417s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1417s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1417s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1418s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1418s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1418s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1418s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1418s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1418s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1418s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1418s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1418s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1418s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_output PASSED [ 92%] 1419s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_mandatory_attributes PASSED [ 92%] 1419s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_expected_attributes PASSED [ 92%] 1419s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_no_unexpected_attributes PASSED [ 92%] 1419s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_size PASSED [ 92%] 1420s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_tt_size PASSED [ 92%] 1420s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_creates_universe PASSED [ 92%] 1420s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_guessed_attributes PASSED [ 92%] 1420s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_moltypes PASSED [ 92%] 1420s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_molnums PASSED [ 92%] 1421s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_chainIDs PASSED [ 92%] 1421s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1422s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1422s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1422s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1423s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1423s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1423s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1424s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1424s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1424s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1425s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1425s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 1425s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 93%] 1425s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 1426s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 93%] 1426s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 1426s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 93%] 1427s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 1427s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 93%] 1427s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1428s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1429s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 95%] 1430s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 95%] 1431s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 95%] 1431s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 95%] 1431s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 95%] 1431s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 95%] 1431s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 95%] 1431s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 95%] 1431s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020-beta2.tpr-OSError] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020-beta2.tpr-OSError] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.tpr-NotImplementedError] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc-OSError] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1432s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1433s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_elements PASSED [ 95%] 1433s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_resids[False-0] PASSED [ 95%] 1433s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_resids[True-1] PASSED [ 95%] 1433s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1433s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 1433s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 1433s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_number_of_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_number_of_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_atom_type_type[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_atom_type_type[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::test_TXYZ_elements PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::test_missing_elements_noattribute PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_txyz.py::test_guessed_masses PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_output PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_mandatory_attributes PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_expected_attributes PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_no_unexpected_attributes PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_size PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_tt_size PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_creates_universe PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_guessed_attributes PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_guessed_masses PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_guessed_types PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_output PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_mandatory_attributes PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_expected_attributes PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_no_unexpected_attributes PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_size PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_tt_size PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_creates_universe PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_guessed_attributes PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_masses[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_masses[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_base.py::test_default_value PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_base.py::test_no_transform_function PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_base.py::test_custom_value PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_base.py::test_setting_thread_limit_value PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_base.py::test_thread_limit_apply PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_boxdimensions_dims PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes0] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes1] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes3] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes4] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes5] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[111909090] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector_asarray[dim_vector_forms_dtypes0] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector_asarray[dim_vector_forms_dtypes1] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector_asarray[abcd] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_transformations_api PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_varying_dimensions_transformations_api PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_varying_dimensions_no_data PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe0] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe1] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe3] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe4] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe5] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[thisisnotanag] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[1] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[ ] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[totallynotmasses] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[123456789] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights3] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights4] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights5] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights6] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[1] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[plane1] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[plane2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[plane3] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[notaplane] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_no_masses PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_no_options PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_residue_mismatch PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_com PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_plane[yz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_plane[xz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_plane[xy] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_all_options PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_transformations_api PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe0] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe1] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe2] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe3] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe4] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe5] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[thisisnotanag] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[1] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_shorter_universe PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[ ] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[totallynotmasses] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[123456789] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights3] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights4] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights5] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights6] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[ ] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[totallynotaplane] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[xyz] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[123456789] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane4] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane5] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane6] PASSED [ 96%] 1434s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane7] PASSED [ 96%] 1435s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_no_options PASSED [ 96%] 1435s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_plane[yz] PASSED [ 96%] 1435s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_plane[xz] PASSED [ 96%] 1435s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_plane[xy] PASSED [ 96%] 1435s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_transformations_api PASSED [ 96%] 1435s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_orthogonal_fwd PASSED [ 96%] 1435s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_nonorthogonal_fwd PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_2nd_frame PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_3rd_frame PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_iterate_twice PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel_skip PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel_stride_2 PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel_jumparound PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_missing_dimensions_init PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_missing_dimensions PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_notinvertible PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_fwd PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_bwd PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_reset PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_specific PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_specific_noreset PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotation_matrix PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_custom_point[point0] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_custom_point[point1] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_vector[vector0] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_vector[vector1] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_cog_nopbc PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_com_nopbc PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_cog_pbc PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_com_pbc PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag0] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag1] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag2] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag3] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag4] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag5] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[thisisnotanag] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[1] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point0] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point1] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point2] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point3] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point4] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point5] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[thisisnotapoint] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[1] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction0] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction1] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction2] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction3] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction4] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction5] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[thisisnotadirection] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[1] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_pbc PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[ ] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[totallynotmasses] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[123456789] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights3] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights4] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights5] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights6] PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_no_masses PASSED [ 96%] 1436s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_no_args PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_coords PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector0] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector1] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector2] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector3] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector4] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector5] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_transformations_api PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_ag PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point0] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point1] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point2] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point3] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point4] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point5] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_pbc PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_center PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_no_masses PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_no_options PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_with_pbc PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_with_mass PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_with_box PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_all_options PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_transformations_api PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag0] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag1] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag2] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag3] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag4] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag5] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[thisisnotanag] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[1] PASSED [ 97%] 1436s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_no_options PASSED [ 97%] 1438s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_with_compounds[group] PASSED [ 97%] 1439s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_with_compounds[residues] PASSED [ 97%] 1442s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_with_compounds[segments] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_with_compounds[fragments] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_api PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag0] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag1] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag2] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag3] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag4] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag5] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[thisisnotanag] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[1] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap PASSED [ 97%] 1444s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_api PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_authors.py::test_package_authors PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_failed_import PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_import PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_all_exports PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_export_variables PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_active PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_primary[MDAnalysis-MDAnalysis-10.25080/majora-629e541a-00e] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_primary[MDAnalysis-MDAnalysis-10.1002/jcc.21787] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.hydrogenbonds.hbond_autocorrel-MDAnalysis.analysis.hydrogenbonds.hbond_autocorrel-10.1063/1.4922445] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.leaflet-MDAnalysis.analysis.leaflet-10.1002/jcc.21787] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.lib.qcprot-MDAnalysis.lib.qcprot-10.1107/s0108767305015266] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.lib.qcprot-MDAnalysis.lib.qcprot-qcprot2] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.encore-MDAnalysis.analysis.encore-10.1371/journal.pcbi.1004415] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.dssp-MDAnalysis.analysis.dssp-10.1002/bip.360221211] PASSED [ 97%] 1444s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_mmtf PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_h5md PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_failure.py::test_failure PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/__init__.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/datafiles.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/dummy.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/test_api.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/util.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/__init__.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/conftest.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_align.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_atomicdistances.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_backends.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_base.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_bat.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_contacts.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_data.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_density.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dielectric.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_diffusionmap.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dihedrals.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_distances.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_encore.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_gnm.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_helix_analysis.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_leaflet.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_lineardensity.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_msd.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_nucleicacids.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_nuclinfo.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_pca.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_persistencelength.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rdf.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rdf_s.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_results.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_wbridge.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hole2.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_psa.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_waterdynamics.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/auxiliary/__init__.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/auxiliary/base.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/auxiliary/test_core.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/auxiliary/test_edr.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/auxiliary/test_xvg.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/__init__.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_base.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_openmm.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_openmm_parser.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_parmed.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_parmed_parser.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_rdkit.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_rdkit_parser.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/__init__.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/base.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/reference.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_chainreader.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_chemfiles.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_copying.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_crd.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_dcd.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_dlpoly.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_dms.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_fhiaims.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_gms.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_gro.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_gsd.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_h5md.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_lammps.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_memory.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_mmtf.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_mol2.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_namdbin.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_netcdf.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_null.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_pdb.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_pdbqt.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_pqr.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_reader_api.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_timestep_api.py] PASSED [ 97%] 1445s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_tng.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_trc.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_trj.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_trz.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_txyz.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_windows.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_writer_api.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_writer_registration.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_xdr.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_xyz.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_accessors.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_accumulate.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_atom.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_atomgroup.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_atomselections.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_copying.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_fragments.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_group_traj_access.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_groups.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_index_dtype.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_requires.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_residue.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_residuegroup.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_segment.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_segmentgroup.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_topology.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_topologyattrs.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_topologyobjects.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_universe.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_unwrap.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_updating_atomgroup.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_wrap.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/util.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/analysis/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/capping/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/contacts/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/create_data.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/create_h5md_data.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gromacs/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gromos11/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/merge/__init__.py] PASSED [ 97%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/merge/2zmm/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/windows/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/formats/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/formats/test_libdcd.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/formats/test_libmdaxdr.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/guesser/test_base.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/guesser/test_default_guesser.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/import/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/import/fork_called.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/import/test_import.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_augment.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_cutil.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_distances.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_log.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_neighborsearch.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_nsgrid.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_pkdtree.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_qcprot.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_util.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/base.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_altloc.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_crd.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_dlpoly.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_dms.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_fhiaims.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_gms.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_gro.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_gsd.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_guessers.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_hoomdxml.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_itp.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_lammpsdata.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_minimal.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_mmtf.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_mol2.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_pdb.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_pdbqt.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_pqr.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_psf.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_tables.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_top.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_topology_base.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_topology_str_types.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_tprparser.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_txyz.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_xpdb.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_xyz.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_base.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_boxdimensions.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_fit.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_nojump.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_positionaveraging.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_rotate.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_translate.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_wrap.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_authors.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_datafiles.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_duecredit.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_failure.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_imports.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_log.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_meta.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_modelling.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_persistence.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_pickleio.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_qcprot.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_selections.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_streamio.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_transformations.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_units.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/visualization/__init__.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/visualization/test_streamlines.py] PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_log.py::test_start_stop_logging PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_meta.py::test_import PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_meta.py::test_matching_versions PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_meta.py::test_version_format PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_meta.py::test_version_at_packagelevel PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_modelling.py::TestCapping::test_capping_file PASSED [ 98%] 1446s testsuite/MDAnalysisTests/utils/test_modelling.py::TestCapping::test_capping_inmemory 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testsuite/MDAnalysisTests/utils/test_transformations.py::test_superimposition_matrix[superimposition_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_superimposition_matrix[superimposition_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_1[euler_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_1[euler_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_2[euler_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_2[euler_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_1[euler_from_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_1[euler_from_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_2[euler_from_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_2[euler_from_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_euler_from_quaternion PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_from_euler[quaternion_from_euler0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_from_euler[quaternion_from_euler1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_about_axis[quaternion_about_axis0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_about_axis[quaternion_about_axis1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_1[quaternion_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_1[quaternion_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_2[quaternion_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_2[quaternion_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_3[quaternion_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_3[quaternion_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_1[quaternion_from_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_1[quaternion_from_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_2[quaternion_from_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_2[quaternion_from_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_3[quaternion_from_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_3[quaternion_from_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_4[quaternion_from_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_4[quaternion_from_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_5[quaternion_from_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_5[quaternion_from_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_6[quaternion_from_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_6[quaternion_from_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_multiply[quaternion_multiply0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_multiply[quaternion_multiply1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_conjugate[quaternion_conjugate0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_conjugate[quaternion_conjugate1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_inverse[quaternion_inverse0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_inverse[quaternion_inverse1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_real PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_imag PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_slerp[quaternion_slerp0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_slerp[quaternion_slerp1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_1[random_quaternion0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_1[random_quaternion1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_2[random_quaternion0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_2[random_quaternion1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_random_rotation_matrix[random_rotation_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::test_random_rotation_matrix[random_rotation_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[1-inverse_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[1-inverse_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[2-inverse_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[2-inverse_matrix1] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[3-inverse_matrix0] PASSED [ 99%] 1462s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[3-inverse_matrix1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[4-inverse_matrix0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[4-inverse_matrix1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[5-inverse_matrix0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[5-inverse_matrix1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[6-inverse_matrix0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[6-inverse_matrix1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse_matrix[inverse_matrix0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse_matrix[inverse_matrix1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_1[is_same_transform0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_1[is_same_transform1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_2[is_same_transform0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_2[is_same_transform1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_1[random_vector0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_1[random_vector1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_2[random_vector0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_2[random_vector1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_1[unit_vector0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_1[unit_vector1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_2[unit_vector0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_2[unit_vector1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_3[unit_vector0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_3[unit_vector1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_4[unit_vector0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_4[unit_vector1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_5[unit_vector0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_5[unit_vector1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_6[unit_vector0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_6[unit_vector1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_1[vector_norm0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_1[vector_norm1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_2[vector_norm0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_2[vector_norm1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_3[vector_norm0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_3[vector_norm1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_4[vector_norm0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_4[vector_norm1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_5[vector_norm0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_5[vector_norm1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_6[vector_norm0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_6[vector_norm1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestArcBall::test_arcball_1 PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::TestArcBall::test_arcball_2 PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::test_rotaxis_equal_vectors PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_transformations.py::test_rotaxis_different_vectors PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestUnitEncoding::test_unicode PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestUnitEncoding::test_unicode_encoding_with_symbol PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[N_Avogadro-6.02214129e+23] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[elementary_charge-1.602176565e-19] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[calorie-4.184] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[Boltzmann_constant-0.008314462159] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[Boltzman_constant-0.008314462159] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[electric_constant-0.00552635] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_boltzmann_typo_deprecation PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_length[12.34567-nm-A-123.4567] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_length[123.4567-Angstrom-nm-12.34567] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-ps-AKMA-20.45482949774598] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-AKMA-ps-0.04888821] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-ps-ms-1e-09] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-ms-ps-1000000000.0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-ps-us-1e-06] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-us-ps-1000000.0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_energy[1-kcal/mol-kJ/mol-4.184] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_energy[1-kcal/mol-eV-0.0433641] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_force[1-kJ/(mol*A)-J/m-1.66053892103219e-11] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_force[2.5-kJ/(mol*nm)-kJ/(mol*A)-0.25] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_force[1-kcal/(mol*Angstrom)-kJ/(mol*Angstrom)-4.184] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ps-m/s-100.0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ps-nm/ps-0.1] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ps-pm/ps-100.0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ms-A/ps-1000000000.0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/us-A/ps-1000000.0] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/fs-A/ps-0.001] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/AKMA-A/ps-20.45482949774598] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_unit_unknown[12.34567-Stone-nm] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_unit_unknown[12.34567-nm-Stone] PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_unit_unconvertable PASSED [ 99%] 1463s testsuite/MDAnalysisTests/utils/test_units.py::TestBaseUnits::test_MDANALYSIS_BASE_UNITS_correct PASSED [ 99%] 1463s testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_2D FAILED [ 99%] 1463s testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_2D_zero_return FAILED [ 99%] 1463s testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_3D FAILED [100%] 1463s 1463s ==================================== ERRORS ==================================== 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3P.test_hbond_analysis[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:58: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3P.test_count_by_time[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:58: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3P.test_count_by_type[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:58: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3P.test_count_by_ids[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:58: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3P.test_hbonds_deprecated_attr[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:58: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisIdeal.test_count_by_type[client_HydrogenBondAnalysis0] _ 1463s 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @staticmethod 1463s @pytest.fixture(scope='class') 1463s def hydrogen_bonds(universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis( 1463s universe, 1463s **TestHydrogenBondAnalysisIdeal.kwargs 1463s ) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:189: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisIdeal.test_first_hbond[client_HydrogenBondAnalysis0] _ 1463s 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @staticmethod 1463s @pytest.fixture(scope='class') 1463s def hydrogen_bonds(universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis( 1463s universe, 1463s **TestHydrogenBondAnalysisIdeal.kwargs 1463s ) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:189: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisIdeal.test_count_by_time[client_HydrogenBondAnalysis0] _ 1463s 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @staticmethod 1463s @pytest.fixture(scope='class') 1463s def hydrogen_bonds(universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis( 1463s universe, 1463s **TestHydrogenBondAnalysisIdeal.kwargs 1463s ) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:189: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisIdeal.test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis0] _ 1463s 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @staticmethod 1463s @pytest.fixture(scope='class') 1463s def hydrogen_bonds(universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis( 1463s universe, 1463s **TestHydrogenBondAnalysisIdeal.kwargs 1463s ) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:189: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisIdeal.test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis0] _ 1463s 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @staticmethod 1463s @pytest.fixture(scope='class') 1463s def hydrogen_bonds(universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis( 1463s universe, 1463s **TestHydrogenBondAnalysisIdeal.kwargs 1463s ) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:189: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisNoRes.test_count_by_type[client_HydrogenBondAnalysis0] _ 1463s 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @staticmethod 1463s @pytest.fixture(scope='class') 1463s def hydrogen_bonds(universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis( 1463s universe, 1463s **TestHydrogenBondAnalysisNoRes.kwargs 1463s ) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:354: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisNoRes.test_first_hbond[client_HydrogenBondAnalysis0] _ 1463s 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @staticmethod 1463s @pytest.fixture(scope='class') 1463s def hydrogen_bonds(universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis( 1463s universe, 1463s **TestHydrogenBondAnalysisNoRes.kwargs 1463s ) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:354: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisNoRes.test_count_by_time[client_HydrogenBondAnalysis0] _ 1463s 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @staticmethod 1463s @pytest.fixture(scope='class') 1463s def hydrogen_bonds(universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis( 1463s universe, 1463s **TestHydrogenBondAnalysisNoRes.kwargs 1463s ) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:354: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisNoRes.test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis0] _ 1463s 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @staticmethod 1463s @pytest.fixture(scope='class') 1463s def hydrogen_bonds(universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis( 1463s universe, 1463s **TestHydrogenBondAnalysisNoRes.kwargs 1463s ) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:354: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisNoRes.test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis0] _ 1463s 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @staticmethod 1463s @pytest.fixture(scope='class') 1463s def hydrogen_bonds(universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis( 1463s universe, 1463s **TestHydrogenBondAnalysisNoRes.kwargs 1463s ) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:354: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_.test_hbond_analysis[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:58: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_.test_count_by_time[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:58: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_.test_count_by_type[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:58: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_.test_count_by_ids[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:58: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_.test_hbonds_deprecated_attr[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:58: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3PStartStep.test_hbond_analysis[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis, start=1, step=2) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:638: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3PStartStep.test_count_by_time[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis, start=1, step=2) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:638: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ ERROR at setup of TestHydrogenBondAnalysisTIP3PStartStep.test_count_by_type[client_HydrogenBondAnalysis0] _ 1463s 1463s self = 1463s universe = 1463s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.fixture(scope='class') 1463s def h(self, universe, client_HydrogenBondAnalysis): 1463s h = HydrogenBondAnalysis(universe, **self.kwargs) 1463s > h.run(**client_HydrogenBondAnalysis, start=1, step=2) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:638: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s =================================== FAILURES =================================== 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1y1lA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1y1lA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s /usr/lib/python3.13/multiprocessing/process.py:121: in start 1463s self._popen = self._Popen(self) 1463s /usr/lib/python3.13/multiprocessing/context.py:282: in _Popen 1463s return Popen(process_obj) 1463s /usr/lib/python3.13/multiprocessing/popen_fork.py:20: in __init__ 1463s self._launch(process_obj) 1463s /usr/lib/python3.13/multiprocessing/popen_fork.py:76: in _launch 1463s atexit._run_exitfuncs() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s n = 15 1463s f = 1463s 1463s > signal.signal(signal.SIGTERM, lambda n, f: sys.exit(1)) 1463s E SystemExit: 1 1463s 1463s /usr/lib/python3/dist-packages/gsd/__init__.py:25: SystemExit 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2a2lA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2a2lA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cayA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cayA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cviA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cviA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2fvvA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2fvvA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2gu3A.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2gu3A.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2i39A.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2i39A.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2j49A.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2j49A.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2qdlA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2qdlA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2va0A.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2va0A.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xcjA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xcjA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xr6A.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xr6A.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3a4rA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3a4rA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3aqgA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3aqgA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3e8mA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3e8mA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ejfA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ejfA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3fhkA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3fhkA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gfsA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gfsA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gknA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gknA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gwiA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gwiA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3hklA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3hklA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ieyB.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ieyB.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ii2A.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ii2A.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3k7pA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3k7pA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3l4rA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3l4rA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3lqcA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3lqcA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nbkA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nbkA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nngA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nngA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ny7A.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ny7A.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nzmA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nzmA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3on9A.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3on9A.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3pivA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3pivA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3q4oA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3q4oA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3so6A.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3so6A.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3t5gB.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3t5gB.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3vjzA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3vjzA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4dkcA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4dkcA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _ test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4gcnA.pdb.gz] _ 1463s 1463s pdb_filename = '/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4gcnA.pdb.gz' 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s @pytest.mark.parametrize("pdb_filename", glob.glob(f"{DSSP_FOLDER}/?????.pdb.gz")) 1463s def test_file_guess_hydrogens(pdb_filename, client_DSSP): 1463s u = mda.Universe(pdb_filename) 1463s with open(f"{pdb_filename.rstrip('.gz')}.dssp", "r") as fin: 1463s correct_answ = fin.read().strip().split()[0] 1463s 1463s > run = DSSP(u, guess_hydrogens=True).run(**client_DSSP) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:18: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s ________________________ test_trajectory[client_DSSP0] _________________________ 1463s 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s def test_trajectory(client_DSSP): 1463s u = mda.Universe(TPR, XTC).select_atoms("protein").universe 1463s > run = DSSP(u).run(**client_DSSP, stop=10) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:25: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _________________________ test_atomgroup[client_DSSP0] _________________________ 1463s 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s def test_atomgroup(client_DSSP): 1463s protein = mda.Universe(TPR, XTC).select_atoms("protein") 1463s > run = DSSP(protein).run(**client_DSSP, stop=10) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:37: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _________________ test_trajectory_with_hydrogens[client_DSSP0] _________________ 1463s 1463s client_DSSP = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s def test_trajectory_with_hydrogens(client_DSSP): 1463s u = mda.Universe(TPR, XTC).select_atoms("protein").universe 1463s > run = DSSP(u, guess_hydrogens=False).run(**client_DSSP, stop=10) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py:47: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s _____________________ TestEncore.test_parallel_calculation _____________________ 1463s 1463s self = 1463s 1463s @pytest.mark.xfail(os.name == 'nt', 1463s reason="Not yet supported on Windows.") 1463s def test_parallel_calculation(self): 1463s 1463s arguments = [tuple([i]) for i in np.arange(0,100)] 1463s 1463s parallel_calculation = encore.utils.ParallelCalculation(function=function, 1463s n_jobs=4, 1463s args=arguments) 1463s > results = parallel_calculation.run() 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_encore.py:139: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/utils.py:300: in run 1463s manager = Manager() 1463s /usr/lib/python3.13/multiprocessing/context.py:57: in Manager 1463s m.start() 1463s /usr/lib/python3.13/multiprocessing/managers.py:565: in start 1463s self._process.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1463s E AssertionError: daemonic processes are not allowed to have children 1463s 1463s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1463s ________________________ test_gnm[client_GNMAnalysis0] _________________________ 1463s 1463s universe = 1463s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_gnm_client_GNMAnalysis0_0') 1463s client_GNMAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1463s 1463s def test_gnm(universe, tmpdir, client_GNMAnalysis): 1463s output = os.path.join(str(tmpdir), 'output.txt') 1463s gnm = mda.analysis.gnm.GNMAnalysis(universe, ReportVector=output) 1463s > gnm.run(**client_GNMAnalysis) 1463s 1463s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_gnm.py:44: 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1463s remote_objects: list["AnalysisBase"] = executor.apply( 1463s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1463s with Pool(processes=self.n_workers) as pool: 1463s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1463s return Pool(processes, initializer, initargs, maxtasksperchild, 1463s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1463s self._repopulate_pool() 1463s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1463s return self._repopulate_pool_static(self._ctx, self.Process, 1463s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1463s w.start() 1463s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1463s 1463s self = 1463s 1463s def start(self): 1463s ''' 1463s Start child process 1463s ''' 1463s self._check_closed() 1463s assert self._popen is None, 'cannot start a process twice' 1463s assert self._parent_pid == os.getpid(), \ 1463s 'can only start a process object created by current process' 1463s > assert not _current_process._config.get('daemon'), \ 1463s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ____________________ test_gnm_run_step[client_GNMAnalysis0] ____________________ 1464s 1464s universe = 1464s client_GNMAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_gnm_run_step(universe, client_GNMAnalysis): 1464s gnm = mda.analysis.gnm.GNMAnalysis(universe) 1464s > gnm.run(step=3, **client_GNMAnalysis) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_gnm.py:56: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ______________ test_closeContactGNMAnalysis[client_GNMAnalysis0] _______________ 1464s 1464s universe = 1464s client_GNMAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_closeContactGNMAnalysis(universe, client_GNMAnalysis): 1464s gnm = mda.analysis.gnm.closeContactGNMAnalysis(universe, weights="size") 1464s > gnm.run(stop=2, **client_GNMAnalysis) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_gnm.py:93: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ________ test_closeContactGNMAnalysis_weights_None[client_GNMAnalysis0] ________ 1464s 1464s universe = 1464s client_GNMAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_closeContactGNMAnalysis_weights_None(universe, client_GNMAnalysis): 1464s gnm = mda.analysis.gnm.closeContactGNMAnalysis(universe, weights=None) 1464s > gnm.run(stop=2, **client_GNMAnalysis) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_gnm.py:119: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s _ TestHydrogenBondAnalysisIdeal.test_logging_step_not_1[client_HydrogenBondAnalysis0] _ 1464s 1464s self = 1464s universe = 1464s caplog = <_pytest.logging.LogCaptureFixture object at 0xbc5bb538> 1464s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_logging_step_not_1(self, universe, caplog, 1464s client_HydrogenBondAnalysis): 1464s hbonds = HydrogenBondAnalysis(universe, **self.kwargs) 1464s # using step 2 1464s > hbonds.run(**client_HydrogenBondAnalysis, step=2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:273: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s _ TestHydrogenBondAnalysisNoRes.test_logging_step_not_1[client_HydrogenBondAnalysis0] _ 1464s 1464s self = 1464s universe = 1464s caplog = <_pytest.logging.LogCaptureFixture object at 0xb84b8190> 1464s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_logging_step_not_1(self, universe, caplog, 1464s client_HydrogenBondAnalysis): 1464s hbonds = HydrogenBondAnalysis(universe, **self.kwargs) 1464s # using step 2 1464s > hbonds.run(**client_HydrogenBondAnalysis, step=2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:273: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s _ TestHydrogenBondAnalysisBetween.test_between_all[client_HydrogenBondAnalysis0] _ 1464s 1464s self = 1464s universe = 1464s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_between_all(self, universe, client_HydrogenBondAnalysis): 1464s # don't specify groups between which to find hydrogen bonds 1464s hbonds = HydrogenBondAnalysis(universe, between=None, **self.kwargs) 1464s > hbonds.run(**client_HydrogenBondAnalysis) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:451: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s _ TestHydrogenBondAnalysisBetween.test_between_PW[client_HydrogenBondAnalysis0] _ 1464s 1464s self = 1464s universe = 1464s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_between_PW(self, universe, client_HydrogenBondAnalysis): 1464s # Find only protein-water hydrogen bonds 1464s hbonds = HydrogenBondAnalysis( 1464s universe, 1464s between=["resname PROT", "resname SOL"], 1464s **self.kwargs 1464s ) 1464s > hbonds.run(**client_HydrogenBondAnalysis) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:471: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s _ TestHydrogenBondAnalysisBetween.test_between_PW_PP[client_HydrogenBondAnalysis0] _ 1464s 1464s self = 1464s universe = 1464s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_between_PW_PP(self, universe, client_HydrogenBondAnalysis): 1464s # Find protein-water and protein-protein hydrogen bonds (not 1464s # water-water) 1464s hbonds = HydrogenBondAnalysis( 1464s universe, 1464s between=[ 1464s ["resname PROT", "resname SOL"], 1464s ["resname PROT", "resname PROT"] 1464s ], 1464s **self.kwargs 1464s ) 1464s > hbonds.run(**client_HydrogenBondAnalysis) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:493: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s _ TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_.test_no_hydrogens[client_HydrogenBondAnalysis0] _ 1464s 1464s self = 1464s universe = 1464s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_no_hydrogens(self, universe, client_HydrogenBondAnalysis): 1464s # If no hydrogens are identified at a given frame, check an 1464s # empty donor atom group is created 1464s test_kwargs = TestHydrogenBondAnalysisTIP3P.kwargs.copy() 1464s test_kwargs['donors_sel'] = None # use topology to find pairs 1464s test_kwargs['hydrogens_sel'] = "name H" # no atoms have name H 1464s 1464s h = HydrogenBondAnalysis(universe, **test_kwargs) 1464s > h.run(**client_HydrogenBondAnalysis) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:527: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s _ TestHydrogenBondAnalysisEmptySelections.test_hbond_analysis[client_HydrogenBondAnalysis0] _ 1464s 1464s self = 1464s universe = 1464s client_HydrogenBondAnalysis = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_hbond_analysis(self, universe, client_HydrogenBondAnalysis): 1464s 1464s h = HydrogenBondAnalysis(universe, donors_sel=' ', hydrogens_sel=' ', 1464s acceptors_sel=' ') 1464s > h.run(**client_HydrogenBondAnalysis) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py:701: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s _______________________ TestRMSD.test_rmsd[client_RMSD0] _______________________ 1464s 1464s self = 1464s universe = 1464s correct_values = [[0, 1, 0], [49, 50, 4.68953]] 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_rmsd(self, universe, correct_values, client_RMSD): 1464s # client_RMSD is defined in testsuite/analysis/conftest.py 1464s # among with other testing fixtures. During testing, it will 1464s # collect all possible backends and reasonable number of workers 1464s # for a given AnalysisBase subclass, and extend the tests 1464s # to run with all of them. 1464s RMSD = MDAnalysis.analysis.rms.RMSD(universe, select='name CA') 1464s > RMSD.run(step=49, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:196: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ___________________ TestRMSD.test_rmsd_frames[client_RMSD0] ____________________ 1464s 1464s self = 1464s universe = 1464s correct_values = [[0, 1, 0], [49, 50, 4.68953]] 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_rmsd_frames(self, universe, correct_values, client_RMSD): 1464s RMSD = MDAnalysis.analysis.rms.RMSD(universe, select='name CA') 1464s > RMSD.run(frames=[0, 49], **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:203: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ______________ TestRMSD.test_rmsd_unicode_selection[client_RMSD0] ______________ 1464s 1464s self = 1464s universe = 1464s correct_values = [[0, 1, 0], [49, 50, 4.68953]] 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_rmsd_unicode_selection(self, universe, correct_values, client_RMSD): 1464s RMSD = MDAnalysis.analysis.rms.RMSD(universe, select=u'name CA') 1464s > RMSD.run(step=49, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:210: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ____________ TestRMSD.test_rmsd_atomgroup_selections[client_RMSD0] _____________ 1464s 1464s self = 1464s universe = 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_rmsd_atomgroup_selections(self, universe, client_RMSD): 1464s # see Issue #1684 1464s > R1 = MDAnalysis.analysis.rms.RMSD(universe.atoms, 1464s select="resid 1-30").run(**client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:217: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ________________ TestRMSD.test_rmsd_single_frame[client_RMSD0] _________________ 1464s 1464s self = 1464s universe = 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_rmsd_single_frame(self, universe, client_RMSD): 1464s > RMSD = MDAnalysis.analysis.rms.RMSD(universe, select='name CA', 1464s ).run(start=5, stop=6, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:224: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________ TestRMSD.test_mass_weighted[client_RMSD0] ___________________ 1464s 1464s self = 1464s universe = 1464s correct_values = [[0, 1, 0], [49, 50, 4.68953]] 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_mass_weighted(self, universe, correct_values, client_RMSD): 1464s # mass weighting the CA should give the same answer as weighing 1464s # equally because all CA have the same mass 1464s > RMSD = MDAnalysis.analysis.rms.RMSD(universe, select='name CA', 1464s weights='mass').run(step=49, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:234: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s _________________ TestRMSD.test_custom_weighted[client_RMSD0] __________________ 1464s 1464s self = 1464s universe = 1464s correct_values_mass = [[0, 1, 0], [49, 50, 4.7492]] 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_custom_weighted(self, universe, correct_values_mass, client_RMSD): 1464s > RMSD = MDAnalysis.analysis.rms.RMSD(universe, weights="mass").run(step=49, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:242: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________ TestRMSD.test_weights_mass_is_mass_weighted[client_RMSD0] ___________ 1464s 1464s self = 1464s universe = 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_weights_mass_is_mass_weighted(self, universe, client_RMSD): 1464s > RMSD_mass = MDAnalysis.analysis.rms.RMSD(universe, 1464s weights="mass").run(step=49, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:249: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s _______________ TestRMSD.test_custom_weighted_list[client_RMSD0] _______________ 1464s 1464s self = 1464s universe = 1464s correct_values_mass = [[0, 1, 0], [49, 50, 4.7492]] 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_custom_weighted_list(self, universe, correct_values_mass, client_RMSD): 1464s weights = universe.atoms.masses 1464s > RMSD = MDAnalysis.analysis.rms.RMSD(universe, 1464s weights=list(weights)).run(step=49, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:259: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __ TestRMSD.test_custom_groupselection_weights_applied_1D_array[client_RMSD0] __ 1464s 1464s self = 1464s universe = 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_custom_groupselection_weights_applied_1D_array(self, universe, client_RMSD): 1464s > RMSD = MDAnalysis.analysis.rms.RMSD(universe, 1464s select='backbone', 1464s groupselections=['name CA and resid 1-5', 'name CA and resid 1'], 1464s weights=None, 1464s weights_groupselections=[[1, 0, 0, 0, 0], None]).run(step=49, 1464s **client_RMSD 1464s ) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:266: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ____ TestRMSD.test_custom_groupselection_weights_applied_mass[client_RMSD0] ____ 1464s 1464s self = 1464s universe = 1464s correct_values_mass = [[0, 1, 0], [49, 50, 4.7492]] 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_custom_groupselection_weights_applied_mass(self, universe, correct_values_mass, client_RMSD): 1464s > RMSD = MDAnalysis.analysis.rms.RMSD(universe, 1464s select='backbone', 1464s groupselections=['all', 'all'], 1464s weights=None, 1464s weights_groupselections=['mass', 1464s universe.atoms.masses]).run(step=49, 1464s **client_RMSD 1464s ) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:279: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ______________ TestRMSD.test_rmsd_group_selections[client_RMSD0] _______________ 1464s 1464s self = 1464s universe = 1464s correct_values_group = [[0, 1, 0, 0, 0], [49, 50, 4.7857, 4.7048, 4.6924]] 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_rmsd_group_selections(self, universe, correct_values_group, client_RMSD): 1464s > RMSD = MDAnalysis.analysis.rms.RMSD(universe, 1464s groupselections=['backbone', 'name CA'] 1464s ).run(step=49, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:328: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ________ TestRMSD.test_rmsd_backbone_and_group_selection[client_RMSD0] _________ 1464s 1464s self = 1464s universe = 1464s correct_values_backbone_group = [[0, 1, 0, 0, 0], [49, 50, 4.6997, 1.9154, 2.7139]] 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_rmsd_backbone_and_group_selection(self, universe, 1464s correct_values_backbone_group, 1464s client_RMSD): 1464s > RMSD = MDAnalysis.analysis.rms.RMSD( 1464s universe, 1464s reference=universe, 1464s select="backbone", 1464s groupselections=['backbone and resid 1:10', 1464s 'backbone and resid 10:20']).run(step=49, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:338: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ____________ TestRMSD.test_ref_mobile_mass_mismapped[client_RMSD0] _____________ 1464s 1464s self = 1464s universe = 1464s correct_values_mass_add_ten = [[0, 1, 0.0632], [49, 50, 4.771]] 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_ref_mobile_mass_mismapped(self, universe,correct_values_mass_add_ten, client_RMSD): 1464s reference = MDAnalysis.Universe(PSF, DCD) 1464s universe.atoms.masses = universe.atoms.masses + 10 1464s RMSD = MDAnalysis.analysis.rms.RMSD(universe, 1464s reference=reference, 1464s select='all', 1464s weights='mass', 1464s tol_mass=100) 1464s > RMSD.run(step=49, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:370: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ________________ TestRMSD.test_rmsd_attr_warning[client_RMSD0] _________________ 1464s 1464s self = 1464s universe = 1464s client_RMSD = {'backend': 'multiprocessing', 'n_workers': 2} 1464s 1464s def test_rmsd_attr_warning(self, universe, client_RMSD): 1464s > RMSD = MDAnalysis.analysis.rms.RMSD( 1464s universe, select='name CA').run(stop=2, **client_RMSD) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py:384: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py:822: in run 1464s remote_objects: list["AnalysisBase"] = executor.apply( 1464s /usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py:252: in apply 1464s with Pool(processes=self.n_workers) as pool: 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u0] ___________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u1] ___________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u2] ___________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u3] ___________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u4] ___________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u5] ___________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u6] ___________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u7] ___________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u8] ___________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u9] ___________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u10] __________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u11] __________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u12] __________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u13] __________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s __________________________ test_multiprocess_COG[u14] __________________________ 1464s 1464s u = 1464s 1464s def test_multiprocess_COG(u): 1464s ag = u.atoms[2:5] 1464s 1464s ref = np.array([cog(u, ag, i) 1464s for i in range(3)]) 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:126: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ____________________ test_universe_unpickle_in_new_process _____________________ 1464s 1464s def test_universe_unpickle_in_new_process(): 1464s u = mda.Universe(GRO, XTC) 1464s ref = [getnames(u, i) 1464s for i in range(3)] 1464s 1464s > p = multiprocessing.Pool(2) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:143: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ________________ test_creating_multiple_universe_without_offset ________________ 1464s 1464s temp_xtc = PosixPath('/tmp/pytest-of-ubuntu/pytest-0/test_creating_multiple_univers0/testing.xtc') 1464s ncopies = 3 1464s 1464s def test_creating_multiple_universe_without_offset(temp_xtc, ncopies=3): 1464s # test if they can be created without generating 1464s # the offset simultaneously. 1464s # The tested XTC file is way too short to induce a race scenario but the 1464s # test is included as documentation for the scenario that used to create 1464s # a problem (see PR #3375 and issues #3230, #1988) 1464s 1464s args = (GRO, str(temp_xtc)) 1464s > with multiprocessing.Pool(2) as p: 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:159: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ______________________________ test_streamplot_2D ______________________________ 1464s 1464s membrane_xtc = '/tmp/pytest-of-ubuntu/pytest-0/streamlines0/dummy.xtc' 1464s univ = 1464s 1464s def test_streamplot_2D(membrane_xtc, univ): 1464s # regression test the data structures 1464s # generated by the 2D streamplot code 1464s > u1, v1, avg, std = streamlines.generate_streamlines(topology_file_path=Martini_membrane_gro, 1464s trajectory_file_path=membrane_xtc, 1464s grid_spacing=20, 1464s MDA_selection='name PO4', 1464s start_frame=1, 1464s end_frame=2, 1464s xmin=univ.atoms.positions[...,0].min(), 1464s xmax=univ.atoms.positions[...,0].max(), 1464s ymin=univ.atoms.positions[...,1].min(), 1464s ymax=univ.atoms.positions[...,1].max(), 1464s maximum_delta_magnitude=2.0, 1464s num_cores=1) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/visualization/test_streamlines.py:57: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/visualization/streamlines.py:330: in generate_streamlines 1464s pool = multiprocessing.Pool(num_cores) 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ------------------------------ Captured log setup ------------------------------ 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:653 Universe.load_new(): loading /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/martini_dppc_chol_bilayer.gro... 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s INFO MDAnalysis.core.universe:universe.py:1682 attribute types has been guessed successfully. 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s INFO MDAnalysis.core.universe:universe.py:1682 attribute masses has been guessed successfully. 1464s ________________________ test_streamplot_2D_zero_return ________________________ 1464s 1464s membrane_xtc = '/tmp/pytest-of-ubuntu/pytest-0/streamlines0/dummy.xtc' 1464s univ = 1464s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_streamplot_2D_zero_return0') 1464s 1464s def test_streamplot_2D_zero_return(membrane_xtc, univ, tmpdir): 1464s # simple roundtrip test to ensure that 1464s # zeroed arrays are returned by the 2D streamplot 1464s # code when called with an empty selection 1464s > u1, v1, avg, std = streamlines.generate_streamlines(topology_file_path=Martini_membrane_gro, 1464s trajectory_file_path=membrane_xtc, 1464s grid_spacing=20, 1464s MDA_selection='name POX', 1464s start_frame=1, 1464s end_frame=2, 1464s xmin=univ.atoms.positions[...,0].min(), 1464s xmax=univ.atoms.positions[...,0].max(), 1464s ymin=univ.atoms.positions[...,1].min(), 1464s ymax=univ.atoms.positions[...,1].max(), 1464s maximum_delta_magnitude=2.0, 1464s num_cores=1) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/visualization/test_streamlines.py:87: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/visualization/streamlines.py:330: in generate_streamlines 1464s pool = multiprocessing.Pool(num_cores) 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ______________________________ test_streamplot_3D ______________________________ 1464s 1464s membrane_xtc = '/tmp/pytest-of-ubuntu/pytest-0/streamlines0/dummy.xtc' 1464s univ = 1464s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_streamplot_3D0') 1464s 1464s def test_streamplot_3D(membrane_xtc, univ, tmpdir): 1464s # because mayavi is too heavy of a dependency 1464s # for a roundtrip plotting test, simply 1464s # aim to check for sensible values 1464s # returned by generate_streamlines_3d 1464s > dx, dy, dz = streamlines_3D.generate_streamlines_3d(topology_file_path=Martini_membrane_gro, 1464s trajectory_file_path=membrane_xtc, 1464s grid_spacing=20, 1464s MDA_selection='name PO4', 1464s start_frame=1, 1464s end_frame=2, 1464s xmin=univ.atoms.positions[...,0].min(), 1464s xmax=univ.atoms.positions[...,0].max(), 1464s ymin=univ.atoms.positions[...,1].min(), 1464s ymax=univ.atoms.positions[...,1].max(), 1464s zmin=univ.atoms.positions[...,2].min(), 1464s zmax=univ.atoms.positions[...,2].max(), 1464s maximum_delta_magnitude=2.0, 1464s num_cores=1) 1464s 1464s /tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/visualization/test_streamlines.py:110: 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s /usr/lib/python3/dist-packages/MDAnalysis/visualization/streamlines_3D.py:468: in generate_streamlines_3d 1464s pool = multiprocessing.Pool(num_cores) 1464s /usr/lib/python3.13/multiprocessing/context.py:119: in Pool 1464s return Pool(processes, initializer, initargs, maxtasksperchild, 1464s /usr/lib/python3.13/multiprocessing/pool.py:215: in __init__ 1464s self._repopulate_pool() 1464s /usr/lib/python3.13/multiprocessing/pool.py:306: in _repopulate_pool 1464s return self._repopulate_pool_static(self._ctx, self.Process, 1464s /usr/lib/python3.13/multiprocessing/pool.py:329: in _repopulate_pool_static 1464s w.start() 1464s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 1464s 1464s self = 1464s 1464s def start(self): 1464s ''' 1464s Start child process 1464s ''' 1464s self._check_closed() 1464s assert self._popen is None, 'cannot start a process twice' 1464s assert self._parent_pid == os.getpid(), \ 1464s 'can only start a process object created by current process' 1464s > assert not _current_process._config.get('daemon'), \ 1464s 'daemonic processes are not allowed to have children' 1464s E AssertionError: daemonic processes are not allowed to have children 1464s 1464s /usr/lib/python3.13/multiprocessing/process.py:118: AssertionError 1464s ------------------------------ Captured log call ------------------------------- 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s DEBUG MDAnalysis.core.universe:universe.py:653 Universe.load_new(): loading /tmp/pytest-of-ubuntu/pytest-0/streamlines0/dummy.xtc... 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s INFO MDAnalysis.core.universe:universe.py:1682 attribute types has been guessed successfully. 1464s DEBUG MDAnalysis.core.universe:universe.py:1014 _process_attr: Adding to topology 1464s INFO MDAnalysis.core.universe:universe.py:1682 attribute masses has been guessed successfully. 1464s =========================== short test summary info ============================ 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1y1lA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2a2lA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cayA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cviA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2fvvA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2gu3A.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2i39A.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2j49A.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2qdlA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2va0A.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xcjA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xr6A.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3a4rA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3aqgA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3e8mA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ejfA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3fhkA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gfsA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gknA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gwiA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3hklA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ieyB.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ii2A.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3k7pA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3l4rA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3lqcA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nbkA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nngA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ny7A.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nzmA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3on9A.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3pivA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3q4oA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3so6A.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3t5gB.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3vjzA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4dkcA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4gcnA.pdb.gz] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory[client_DSSP0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_atomgroup[client_DSSP0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_hydrogens[client_DSSP0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_parallel_calculation 1464s FAILED testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm[client_GNMAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm_run_step[client_GNMAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis[client_GNMAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis_weights_None[client_GNMAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_logging_step_not_1[client_HydrogenBondAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_logging_step_not_1[client_HydrogenBondAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_all[client_HydrogenBondAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW[client_HydrogenBondAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW_PP[client_HydrogenBondAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_no_hydrogens[client_HydrogenBondAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_hbond_analysis[client_HydrogenBondAnalysis0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_frames[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_unicode_selection[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_atomgroup_selections[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_single_frame[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_mass_weighted[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_weighted[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_weights_mass_is_mass_weighted[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_weighted_list[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_1D_array[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_mass[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_group_selections[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_backbone_and_group_selection[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_ref_mobile_mass_mismapped[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_attr_warning[client_RMSD0] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u0] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u1] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u2] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u3] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u4] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u5] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u6] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u7] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u8] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u9] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u10] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u11] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u12] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u13] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u14] 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_universe_unpickle_in_new_process 1464s FAILED testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_creating_multiple_universe_without_offset 1464s FAILED testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_2D 1464s FAILED testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_2D_zero_return 1464s FAILED testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_3D 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbond_analysis[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_time[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_type[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_ids[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_type[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_first_hbond[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_time[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_type[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_first_hbond[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_time[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbond_analysis[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_time[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_type[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_ids[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_hbond_analysis[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_time[client_HydrogenBondAnalysis0] 1464s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_type[client_HydrogenBondAnalysis0] 1464s = 89 failed, 18992 passed, 558 skipped, 2 deselected, 7 xfailed, 2 xpassed, 104402 warnings, 23 errors in 869.46s (0:14:29) = 1483s PASSED [ 1%] 1483s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2a2lA.pdb.gz] PASSED [ 1%] 1483s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cayA.pdb.gz] PASSED [ 1%] 1483s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cviA.pdb.gz] PASSED [ 1%] 1483s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2fvvA.pdb.gz] PASSED [ 1%] 1484s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2gu3A.pdb.gz] PASSED [ 1%] 1484s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2i39A.pdb.gz] PASSED [ 1%] 1484s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2j49A.pdb.gz] PASSED [ 1%] 1484s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2qdlA.pdb.gz] PASSED [ 1%] 1484s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2va0A.pdb.gz] PASSED [ 1%] 1484s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xcjA.pdb.gz] PASSED [ 1%] 1484s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 1%] 1485s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xr6A.pdb.gz] PASSED [ 1%] 1485s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3a4rA.pdb.gz] PASSED [ 1%] 1485s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3aqgA.pdb.gz] PASSED [ 1%] 1485s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3e8mA.pdb.gz] PASSED [ 1%] 1485s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ejfA.pdb.gz] PASSED [ 1%] 1486s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3fhkA.pdb.gz] PASSED [ 1%] 1486s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gfsA.pdb.gz] PASSED [ 1%] 1486s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gknA.pdb.gz] PASSED [ 1%] 1487s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gwiA.pdb.gz] PASSED [ 1%] 1487s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3hklA.pdb.gz] PASSED [ 1%] 1487s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ieyB.pdb.gz] PASSED [ 1%] 1487s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ii2A.pdb.gz] PASSED [ 1%] 1487s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3k7pA.pdb.gz] PASSED [ 1%] 1488s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3l4rA.pdb.gz] PASSED [ 1%] 1488s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3lqcA.pdb.gz] PASSED [ 1%] 1488s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nbkA.pdb.gz] PASSED [ 1%] 1488s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nngA.pdb.gz] PASSED [ 1%] 1488s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ny7A.pdb.gz] PASSED [ 1%] 1488s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nzmA.pdb.gz] PASSED [ 1%] 1489s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3on9A.pdb.gz] PASSED [ 1%] 1489s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3pivA.pdb.gz] PASSED [ 1%] 1489s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3q4oA.pdb.gz] PASSED [ 1%] 1489s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3so6A.pdb.gz] PASSED [ 1%] 1489s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3t5gB.pdb.gz] PASSED [ 1%] 1490s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3vjzA.pdb.gz] PASSED [ 1%] 1490s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4dkcA.pdb.gz] PASSED [ 1%] 1490s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4gcnA.pdb.gz] PASSED [ 1%] 1492s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory[client_DSSP0] PASSED [ 1%] 1492s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_atomgroup[client_DSSP0] PASSED [ 1%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_hydrogens[client_DSSP0] PASSED [ 1%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_without_hydrogen_fails[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 1%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_uneven_number_of_atoms_fails[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1mr1D_failing.pdb.gz] PASSED [ 1%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_exception_raises_with_atom_index[client_DSSP0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/wrong_hydrogens.pdb.gz] PASSED [ 1%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1ahsA.pdb.gz] PASSED [ 1%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1bvyF.pdb.gz] PASSED [ 2%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1dx5I.pdb.gz] PASSED [ 2%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1eteA.pdb.gz] PASSED [ 2%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1h4aX.pdb.gz] PASSED [ 2%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1i8nA.pdb.gz] PASSED [ 2%] 1494s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1lpbA.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1mr1D.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1or4A.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1pdoA.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1v7mV.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1y1lA.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2a2lA.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cayA.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2cviA.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2fvvA.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2gu3A.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2i39A.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2j49A.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2qdlA.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2va0A.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xcjA.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xr6A.pdb.gz] PASSED [ 2%] 1495s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3a4rA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3aqgA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3e8mA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ejfA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3fhkA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gfsA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gknA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3gwiA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3hklA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ieyB.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ii2A.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3k7pA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3l4rA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3lqcA.pdb.gz] PASSED [ 2%] 1496s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nbkA.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nngA.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3ny7A.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3nzmA.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3on9A.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3pivA.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3q4oA.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3so6A.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3t5gB.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/3vjzA.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4dkcA.pdb.gz] PASSED [ 2%] 1497s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/4gcnA.pdb.gz] PASSED [ 2%] 1499s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory[client_DSSP1] PASSED [ 2%] 1499s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_atomgroup[client_DSSP1] PASSED [ 2%] 1500s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_hydrogens[client_DSSP1] PASSED [ 2%] 1500s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_without_hydrogen_fails[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 2%] 1500s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_uneven_number_of_atoms_fails[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/1mr1D_failing.pdb.gz] PASSED [ 2%] 1500s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_exception_raises_with_atom_index[client_DSSP1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dssp/wrong_hydrogens.pdb.gz] PASSED [ 2%] 1500s testsuite/MDAnalysisTests/analysis/test_encore.py::test_moved_to_mdakit_warning PASSED [ 2%] 1500s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_triangular_matrix PASSED [ 2%] 1500s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_parallel_calculation PASSED [ 2%] 1500s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_rmsd_matrix_with_superimposition PASSED [ 2%] 1501s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_rmsd_matrix_with_superimposition_custom_weights PASSED [ 2%] 1501s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_rmsd_matrix_without_superimposition PASSED [ 2%] 1501s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ensemble_superimposition PASSED [ 2%] 1502s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ensemble_superimposition_to_reference_non_weighted PASSED [ 2%] 1502s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_covariance_matrix PASSED [ 2%] 1502s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_covariance_matrix_with_reference PASSED [ 2%] 1507s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_to_self PASSED [ 2%] 1511s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes PASSED [ 2%] 1521s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_custom_weights PASSED [ 2%] 1526s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_align PASSED [ 2%] 1526s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_to_self PASSED [ 2%] 1527s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces PASSED [ 2%] 1527s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_to_self PASSED [ 2%] 1528s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres PASSED [ 2%] 1529s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_without_superimposition XPASS [ 2%] 1529s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_convergence PASSED [ 2%] 1531s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_convergence PASSED [ 2%] 1532s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_error_estimation XPASS [ 2%] 1534s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_error_estimation PASSED [ 2%] 1538s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_error_estimation_ensemble_bootstrap PASSED [ 2%] 1541s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_error_estimation PASSED [ 2%] 1541s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_one_ensemble PASSED [ 2%] 1542s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_ensembles PASSED [ 2%] 1543s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_three_ensembles_two_identical PASSED [ 2%] 1543s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_methods PASSED [ 2%] 1543s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_AffinityPropagationNative_direct PASSED [ 2%] 1543s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_AffinityPropagation_direct PASSED [ 2%] 1544s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_KMeans_direct PASSED [ 2%] 1544s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_DBSCAN_direct PASSED [ 2%] 1544s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_different_methods PASSED [ 2%] 1545s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_method_w_no_distance_matrix PASSED [ 2%] 1545s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_methods_one_w_no_distance_matrix PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_sklearn_affinity_propagation PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_ClusterCollection_init PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_Cluster_init PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_ClusterCollection_get_ids PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_ClusterCollection_get_centroids PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_add_metadata PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_empty_cluster PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_centroid_not_in_elements PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_metadata_size_error PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_iteration PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_len PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_repr PASSED [ 2%] 1546s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClusteringSklearn::test_one PASSED [ 2%] 1547s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_one_ensemble PASSED [ 2%] 1547s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_two_ensembles PASSED [ 2%] 1548s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_three_ensembles_two_identical PASSED [ 2%] 1549s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_specified_dimension PASSED [ 2%] 1549s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_SPENative_direct PASSED [ 2%] 1549s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_PCA_direct PASSED [ 2%] 1549s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_different_method PASSED [ 2%] 1550s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_two_methods PASSED [ 2%] 1551s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_two_different_methods PASSED [ 2%] 1551s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreConfDistMatrix::test_get_distance_matrix PASSED [ 2%] 1551s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreImportWarnings::test_import_warnings PASSED [ 2%] 1552s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm[client_GNMAnalysis0] PASSED [ 2%] 1553s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm_run_step[client_GNMAnalysis0] PASSED [ 2%] 1555s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis[client_GNMAnalysis0] PASSED [ 2%] 1558s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis_weights_None[client_GNMAnalysis0] PASSED [ 2%] 1559s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm[client_GNMAnalysis1] PASSED [ 2%] 1560s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm_run_step[client_GNMAnalysis1] PASSED [ 2%] 1563s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis[client_GNMAnalysis1] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis_weights_None[client_GNMAnalysis1] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_generate_kirchoff PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm_SVD_fail PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_plane_circle PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_ortho_circle PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_around_circle PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_around_circle_rising PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_parallel_axes PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis0-screw_angles0] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis1-screw_angles1] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis2-screw_angles2] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis3-screw_angles3] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis4-screw_angles4] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis5-screw_angles5] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis6-screw_angles6] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis7-screw_angles7] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis8-screw_angles8] PASSED [ 2%] 1566s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis9-screw_angles9] PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis10-screw_angles10] PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis11-screw_angles11] PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis12-screw_angles12] PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis13-screw_angles13] PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis14-screw_angles14] PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_square_oct PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_regression_summary PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_regression_values PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_multiple_selections PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_universe_from_origins PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_universe_from_origins_except PASSED [ 2%] 1567s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_multiple_atoms_per_residues PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_residue_gaps_split PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_residue_gaps_no_split PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_len_groups_short PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis0-screw_angles0] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis1-screw_angles1] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis2-screw_angles2] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis3-screw_angles3] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis4-screw_angles4] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis5-screw_angles5] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis6-screw_angles6] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis7-screw_angles7] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis8-screw_angles8] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis9-screw_angles9] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis10-screw_angles10] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis11-screw_angles11] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis12-screw_angles12] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis13-screw_angles13] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis14-screw_angles14] PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_vector_of_best_fit PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_hole2.py::test_moved_to_mdakit_warning SKIPPED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_continuous PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_continuous_excl PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_intermittent PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_intermittent_timecut PASSED [ 2%] 1568s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_intermittent_excl PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_solve_continuous PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_solve_intermittent PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_wronglength_DA PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_exclusions PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_bond_type_VE PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_solve_before_run_VE PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_unslicable_traj_VE PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_repr PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::test_find_donors PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::test_donors_nobonds PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_continuous PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_continuous_excl PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_intermittent PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_intermittent_timecut PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_intermittent_excl PASSED [ 2%] 1569s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_solve_continuous PASSED [ 2%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_solve_intermittent PASSED [ 2%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_wronglength_DA PASSED [ 2%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_exclusions PASSED [ 2%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_bond_type_VE PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_solve_before_run_VE PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_unslicable_traj_VE PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_repr PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_deprecation_warning PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_find_donors PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_donors_nobonds PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_find_hydrogen_donors_deprecation_warning PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_moved_module_warning PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbond_analysis[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_time[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_type[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_ids[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_type[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_first_hbond[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_time[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_logging_step_not_1[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_type[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_first_hbond[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_time[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis0] PASSED [ 3%] 1570s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_logging_step_not_1[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_all[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW_PP[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbond_analysis[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_time[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_type[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_ids[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_no_hydrogens[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_hbond_analysis[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_time[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_type[client_HydrogenBondAnalysis0] PASSED [ 3%] 1571s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_hbond_analysis[client_HydrogenBondAnalysis0] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_time[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_ids[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_first_hbond[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_time[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_logging_step_not_1[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_first_hbond[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_time[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_logging_step_not_1[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_all[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW_PP[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_time[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_ids[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_no_hydrogens[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_time[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_no_bond_info_exception PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_no_bond_donor_sel PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_no_attr_hbonds PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_bond_info_exception PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_bond_donor_sel PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_attr_hbonds PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_hydrogen_bonds PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessDonors_NoTopology::test_guess_donors PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessHydrogens_NoTopology::test_guess_hydrogens PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessHydrogens_NoTopology::test_guess_hydrogens_empty_selection PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessHydrogens_NoTopology::test_guess_hydrogens_min_max_mass PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_empty_sel[donors_sel] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_empty_sel[hydrogens_sel] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_empty_sel[acceptors_sel] PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_leaflet.py::test_optional_nx SKIPPED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_leaflet_finder PASSED [ 3%] 1573s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_string_vs_atomgroup_proper PASSED [ 3%] 1574s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_optimize_cutoff PASSED [ 3%] 1574s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_pbc_on_off PASSED [ 3%] 1574s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_pbc_on_off_difference PASSED [ 3%] 1574s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_sparse_on_off_none[True] PASSED [ 3%] 1574s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_sparse_on_off_none[False] PASSED [ 3%] 1574s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_sparse_on_off_none[None] PASSED [ 3%] 1574s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_cutoff_update PASSED [ 3%] 1574s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_cutoff_update_default PASSED [ 3%] 1574s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_write_selection PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_component_index_is_not_none PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_invalid_grouping PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[atoms-expected_masses0-expected_charges0-expected_xmass0-expected_xcharge0] PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[residues-expected_masses1-expected_charges1-expected_xmass1-expected_xcharge1] PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[segments-expected_masses2-expected_charges2-expected_xmass2-expected_xcharge2] PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[fragments-expected_masses3-expected_charges3-expected_xmass3-expected_xcharge3] PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_updating_atomgroup PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_old_name_deprecations PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_parallel_analysis PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_msd.py::test_notidynamics PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_selection_works PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_ag_accepted PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_updating_ag_rejected PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[foo] PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[bar] PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[yx] PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[zyx] PASSED [ 3%] 1575s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[xyz-3] PASSED [ 3%] 1576s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[xy-2] PASSED [ 3%] 1576s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[xz-2] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[yz-2] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[x-1] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[y-1] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[z-1] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[xyz-3] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[xy-2] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[xz-2] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[yz-2] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[x-1] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[y-1] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[z-1] PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_random_walk_u_simple PASSED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_default SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_default_per_particle SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[xyz] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[xy] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[xz] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[yz] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[x] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[y] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[z] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[xyz] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[xy] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[xz] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[yz] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[x] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[y] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[z] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[xyz-3] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[xy-2] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[xz-2] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[yz-2] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[x-1] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[y-1] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[z-1] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[xyz-3] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[xy-2] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[xz-2] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[yz-2] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[x-1] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[y-1] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[z-1] SKIPPED [ 3%] 1577s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_random_walk_u_fft SKIPPED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_empty_ag_error PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_shape PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_results_keys PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_invalid_residue_types PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_selection_length_mismatch PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_deprecation_warning PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_strand_verification PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[0] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[1] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[2] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[parsnips] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[time] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[-1] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_minor_dist PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_major_dist PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_wc_pair[1-2-RNAA-RNAA-4.3874702] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_wc_pair[22-23-RNAA-RNAA-4.1716404] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_minor_pair[3-17-RNAA-RNAA-15.06506] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_minor_pair[20-5-RNAA-RNAA-3.219116] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_major_pair[2-12-RNAA-RNAA-26.884272] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_major_pair[5-9-RNAA-RNAA-13.578535] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_cp[RNAA-9-3.16497] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_cp[RNAA-21-22.07721] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_as[RNAA-1-359.5758] PASSED [ 3%] 1578s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_as[RNAA-11-171.71645] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors[RNAA-5-expected_value0] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors[RNAA-21-expected_value1] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_alpha[RNAA-6-279.15103] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_alpha[RNAA-18-298.09936] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_beta[RNAA-7-184.20501] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_beta[RNAA-15-169.70042] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_gamma[RNAA-7-52.72022] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_gamma[RNAA-15-54.59684] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_delta[RNAA-7-84.80554] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_delta[RNAA-15-82.00043] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_eps[RNAA-7-200.4099] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_eps[RNAA-15-210.96953] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_zeta[RNAA-7-297.84736] PASSED [ 3%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_zeta[RNAA-15-330.24898] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-1-178.37435] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-2-202.03418] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-7-200.91674] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-15-209.32109] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-20-103.07024] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-5-156.62223] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-7-77.94538] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-15-130.18539] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_pseudo_dihe_baseflip[16-2-3-RNAA-RNAA-RNAA-314.69804] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_pseudo_dihe_baseflip[8-9-10-RNAA-RNAA-RNAA-34.50106] PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cov PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cum_var PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pcs PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pcs_n_components PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_different_steps PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_different_atoms PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_rerun PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_not_run PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_no_frames PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_can_run_frames PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_mismatch PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_universe PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_no_pca_run PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_none_anchor PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_more_anchor PASSED [ 4%] 1579s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_less_anchor PASSED [ 4%] 1580s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_invalid_anchor PASSED [ 4%] 1581s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_compare_projections PASSED [ 4%] 1581s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_reconstruct_whole PASSED [ 4%] 1581s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[0-0] PASSED [ 4%] 1581s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[0-n21] PASSED [ 4%] 1581s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[n12-n22] PASSED [ 4%] 1581s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[0-1] PASSED [ 4%] 1581s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[1-0] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_extrapolate_translation PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cosine_content PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_mean_shape PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_calculate_mean PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_given_mean PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_wrong_num_given_mean PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_alignment PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_covariance_norm PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_rmsip_self PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_rmsip_ortho PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pytest_too_many_components PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_asymmetric_rmsip PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_cumulative_overlap_self PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cumulative_overlap_ortho PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_other[rmsip] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_other[cumulative_overlap] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_self[rmsip] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_self[cumulative_overlap] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_wrong_class[rmsip] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_wrong_class[cumulative_overlap] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_attr_warning[p_components] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_attr_warning[variance] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_attr_warning[cumulated_variance] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_class_is_parallelizable[PCA-False] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_pca.py::test_supported_backends[PCA-backends0] PASSED [ 4%] 1582s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_ag_ValueError PASSED [ 4%] 1583s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_run PASSED [ 4%] 1583s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_lb PASSED [ 4%] 1583s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_fit PASSED [ 4%] 1583s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_raise_NoDataError PASSED [ 4%] 1584s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_plot_ax_return PASSED [ 4%] 1584s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_plot_with_ax PASSED [ 4%] 1584s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_current_axes PASSED [ 4%] 1585s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test[lb] PASSED [ 4%] 1585s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test[lp] PASSED [ 4%] 1585s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test[fit] PASSED [ 4%] 1585s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestFitExponential::test_fit_simple PASSED [ 4%] 1585s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestFitExponential::test_fit_noisy PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_missing_bonds PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_sortbb PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_not_fragment PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_branches PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_circular PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_psa.py::test_moved_to_mdakit_warning SKIPPED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_nbins PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_range PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_count_sum PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_count PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_double_run PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_exclusion PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues[residue-8] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues[segment-0] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues[chain-8] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues_fails PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[rdf] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[bins] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[edges] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[count] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm[density-1.956823] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm[rdf-244602.88385] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm[none-4] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm_values[Density-density] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm_values[None-none] PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_unknown_norm PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_nbins PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_range PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_count_size PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_count PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_double_run PASSED [ 4%] 1586s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_cdf PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_density[None-26551.55088100731] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_density[False-26551.55088100731] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_density[True-0.021915460340071267] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_overwrite_norm PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm[density-0.021915460340071267] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm[rdf-26551.55088100731] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm[none-0.6] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm_values[Density-density] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm_values[None-none] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_unknown_norm PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[rdf] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[bins] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[edges] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[count] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[cdf] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_get PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_no_attr PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_set_attr PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_set_key PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[_MutableMapping__marker] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__abstractmethods__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__class__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__class_getitem__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__contains__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__copy__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__delattr__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__delitem__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__dict__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__dir__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__doc__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__eq__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__firstlineno__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__format__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ge__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__getattribute__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__getitem__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__getstate__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__gt__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__hash__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__init__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__init_subclass__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ior__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__iter__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__le__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__len__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__lt__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__module__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ne__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__new__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__or__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__reduce__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__reduce_ex__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__repr__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__reversed__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ror__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__setattr__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__setitem__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__sizeof__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__slots__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__static_attributes__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__str__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__subclasshook__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__weakref__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[_abc_impl] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[clear] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[copy] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[fromkeys] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[get] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[items] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[keys] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[pop] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[popitem] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[setdefault] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[update] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[values] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[data] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[_MutableMapping__marker] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__abstractmethods__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__class__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__class_getitem__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__contains__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__copy__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__delattr__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__delitem__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__dict__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__dir__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__doc__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__eq__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__firstlineno__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__format__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ge__] PASSED [ 4%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__getattribute__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__getitem__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__getstate__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__gt__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__hash__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__init__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__init_subclass__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ior__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__iter__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__le__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__len__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__lt__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__module__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ne__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__new__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__or__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__reduce__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__reduce_ex__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__repr__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__reversed__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ror__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__setattr__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__setitem__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__sizeof__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__slots__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__static_attributes__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__str__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__subclasshook__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__weakref__] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[_abc_impl] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[clear] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[copy] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[fromkeys] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[get] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[items] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[keys] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[pop] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[popitem] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[setdefault] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[update] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[values] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[data] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[0123] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[0j] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[1.1] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[{}] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[a b] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_setattr_modify_item PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_setitem_modify_item PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_delattr PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_missing_delattr PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_pop PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_update PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_update_data_fail PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_pickle PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args0-kwargs0-1] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args1-kwargs1-1] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args2-kwargs2-2] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args3-kwargs3-1] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_different_instances PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[1] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[2] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[5] PASSED [ 5%] 1587s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[14] PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_p_frames PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_no_center PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_center PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_list PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_superposition[float32] PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_superposition[float64] PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_weights PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_weights_and_superposition_1 PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_weights_and_superposition_2 PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_unequal_shape PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_wrong_weights PASSED [ 5%] 1588s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_with_superposition_smaller PASSED [ 5%] 1589s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_with_superposition_equal PASSED [ 5%] 1590s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd[client_RMSD0] PASSED [ 5%] 1591s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_frames[client_RMSD0] PASSED [ 5%] 1592s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_unicode_selection[client_RMSD0] PASSED [ 5%] 1594s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_atomgroup_selections[client_RMSD0] PASSED [ 5%] 1595s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_single_frame[client_RMSD0] PASSED [ 5%] 1596s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_mass_weighted[client_RMSD0] PASSED [ 5%] 1597s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_weighted[client_RMSD0] PASSED [ 5%] 1599s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_weights_mass_is_mass_weighted[client_RMSD0] PASSED [ 5%] 1600s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_weighted_list[client_RMSD0] PASSED [ 5%] 1601s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_1D_array[client_RMSD0] PASSED [ 5%] 1602s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_mass[client_RMSD0] PASSED [ 5%] 1603s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_group_selections[client_RMSD0] PASSED [ 5%] 1604s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_backbone_and_group_selection[client_RMSD0] PASSED [ 5%] 1606s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_ref_mobile_mass_mismapped[client_RMSD0] PASSED [ 5%] 1607s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_attr_warning[client_RMSD0] PASSED [ 5%] 1607s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd[client_RMSD1] PASSED [ 5%] 1608s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_frames[client_RMSD1] PASSED [ 5%] 1608s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_unicode_selection[client_RMSD1] PASSED [ 5%] 1608s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_atomgroup_selections[client_RMSD1] PASSED [ 5%] 1608s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_single_frame[client_RMSD1] PASSED [ 5%] 1608s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_mass_weighted[client_RMSD1] PASSED [ 5%] 1608s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_weighted[client_RMSD1] PASSED [ 5%] 1608s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_weights_mass_is_mass_weighted[client_RMSD1] PASSED [ 5%] 1608s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_weighted_list[client_RMSD1] PASSED [ 5%] 1608s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_1D_array[client_RMSD1] PASSED [ 5%] 1609s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_mass[client_RMSD1] PASSED [ 5%] 1609s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_group_selections[client_RMSD1] PASSED [ 5%] 1609s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_backbone_and_group_selection[client_RMSD1] PASSED [ 5%] 1609s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_ref_mobile_mass_mismapped[client_RMSD1] PASSED [ 5%] 1609s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_attr_warning[client_RMSD1] PASSED [ 5%] 1609s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_scalar_weights_raises_ValueError PASSED [ 5%] 1609s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_string_weights_raises_ValueError PASSED [ 5%] 1609s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_mismatched_weights_raises_ValueError PASSED [ 5%] 1610s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_misuse_weights_for_groupselection_raises_TypeError PASSED [ 5%] 1610s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_mismatched_weights_in_groupselection_raises_ValueError PASSED [ 5%] 1610s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_rmsd_list_of_weights_wrong_length PASSED [ 5%] 1610s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_ref_length_unequal_len PASSED [ 5%] 1610s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_mass_mismatches PASSED [ 5%] 1610s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_group_selections_unequal_len PASSED [ 5%] 1611s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf[client_RMSF0] PASSED [ 5%] 1611s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf_single_frame[client_RMSF0] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf_identical_frames[client_RMSF0] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf_attr_warning[client_RMSF0] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_rms.py::test_class_is_parallelizable[RMSD-True] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_rms.py::test_class_is_parallelizable[RMSF-False] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_rms.py::test_supported_backends[RMSD-backends0] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_rms.py::test_supported_backends[RMSF-backends1] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_waterdynamics.py::test_moved_to_mdakit_warning SKIPPED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_nodata PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_selection_type_error PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_distance_type_error PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_selection2_type_error PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_empty_selection PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_loop PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter[hydrogen] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter[heavy] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter_pbc[hydrogen] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter_pbc[heavy] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_accepter_donor[hydrogen] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_accepter_donor[heavy] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_accepter[hydrogen] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_accepter[heavy] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_accepter[hydrogen] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_accepter[heavy] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_donor[hydrogen] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_donor[heavy] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_donor[hydrogen] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_donor[heavy] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_empty PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_same_selection PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_2water_accepter[hydrogen] PASSED [ 5%] 1612s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_2water_accepter[heavy] PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_3water_accepter[hydrogen] PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_3water_accepter[heavy] PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_4water_accepter[hydrogen] PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_4water_accepter[heavy] PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_22water_accepter[hydrogen] PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_22water_accepter[heavy] PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_timeseries_wba PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_timeseries_hba PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_12water_accepter[hydrogen] PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_12water_accepter[heavy] PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_single_link PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_multiple_link PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_multiple_frame PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_filter PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_merge PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_order PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_time PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_time_weight PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_time_empty PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_generate_table_hba PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_generate_table_s1s2 PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_timesteps_by_type PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_duplicate_water PASSED [ 5%] 1613s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_warn_results_deprecated PASSED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_get_auxreader_for_none PASSED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_get_auxreader_for_wrong_auxdata PASSED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_get_auxreader_for_wrong_format PASSED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_notimplemented_read_next_timestep PASSED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_notimplemented_memory_usage PASSED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::test_pyedr_not_present_raises PASSED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_raise_error_no_auxdata_provided SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_n_steps SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_dt SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_initial_time SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_first_step SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_next SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_rewind SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_move_to_step SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_last_step SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_next_past_last_step_raises_StopIteration SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_move_to_invalid_step_raises_IndexError SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_invalid_step_to_time_raises_ValueError SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_iter SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_iter_list SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_iter_slice SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_slice_start_after_stop_raises_IndexError SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_slice_out_of_range_raises_IndexError SKIPPED [ 5%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_slice_non_int_raises_TypeError SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_bad_represent_raises_ValueError SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_time_selector SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_time_selector_manual SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_data_selector SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_no_constant_dt SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_update_ts_without_auxname_raises_ValueError SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_represent_as_closest_with_cutoff SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_auxreader_for SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_auxiliary_read_ts_rewind SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_description SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_load_from_description SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_step_to_frame_out_of_bounds SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_step_to_frame_no_time_diff SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_go_to_step_fail SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_set_constant_dt[True] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_set_constant_dt[False] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_copy SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_time_non_constant_dt SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_iterate_through_trajectory SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_iterate_as_auxiliary_from_trajectory SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_step_to_frame_time_diff SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_lower_freq_timestep SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_higher_freq_timestep SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_offset_timestep SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_represent_as_average SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_represent_as_average_with_cutoff SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_all_terms_from_file SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_all_terms_from_reader SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_term_list_custom_names_from_file SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_term_list_custom_names_from_reader SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_raise_error_if_auxname_already_assigned SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_single_term_custom_name_from_file SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_single_term_custom_name_from_reader SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_terms_update_on_iter SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_invalid_data_selector SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_all_times SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_from_string SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_from_list SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_everything SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_invalid_selections[42] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_invalid_selections[Not a valid term] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_invalid_selections[get_data_input2] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_warning_when_space_in_aux_spec SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_warn_too_much_memory_usage SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_auxreader_picklable SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_units_are_converted_by_EDRReader SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_warning_when_unknown_unit SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_unit_conversion_is_optional SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_edr.py::test_single_frame_input_file SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGStep::test_select_time_none PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGStep::test_select_time_invalid_index PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGStep::test_select_data_none PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_raise_error_no_auxdata_provided PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_n_steps PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_dt PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_initial_time PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_first_step PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_next PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_rewind PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_move_to_step PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_last_step PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_next_past_last_step_raises_StopIteration PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_move_to_invalid_step_raises_IndexError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_invalid_step_to_time_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_iter PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_iter_list PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_iter_slice PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_slice_start_after_stop_raises_IndexError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_slice_out_of_range_raises_IndexError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_slice_non_int_raises_TypeError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_bad_represent_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_time_selector PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_time_non_constant_dt PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_time_selector_manual PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_data_selector PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_no_constant_dt PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_update_ts_without_auxname_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_read_lower_freq_timestep PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_represent_as_average PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_represent_as_average_with_cutoff PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_read_offset_timestep PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_represent_as_closest_with_cutoff PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_read_higher_freq_timestep PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_get_auxreader_for PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_iterate_through_trajectory PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_iterate_as_auxiliary_from_trajectory PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_auxiliary_read_ts_rewind PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_get_description PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_load_from_description PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_step_to_frame_out_of_bounds PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_step_to_frame_no_time_diff PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_step_to_frame_time_diff PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_go_to_step_fail PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_set_constant_dt[True] PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_set_constant_dt[False] PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_copy PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_changing_n_col_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_time_selector_out_of_range_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_data_selector_out_of_range_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_raise_error_no_auxdata_provided PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_n_steps PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_dt PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_initial_time PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_first_step PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_next PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_rewind PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_move_to_step PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_last_step PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_next_past_last_step_raises_StopIteration PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_move_to_invalid_step_raises_IndexError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_invalid_step_to_time_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_iter PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_iter_list PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_iter_slice PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_slice_start_after_stop_raises_IndexError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_slice_out_of_range_raises_IndexError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_slice_non_int_raises_TypeError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_bad_represent_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_time_selector PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_time_non_constant_dt PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_time_selector_manual PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_data_selector PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_no_constant_dt PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_update_ts_without_auxname_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_read_lower_freq_timestep PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_represent_as_average PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_represent_as_average_with_cutoff PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_read_offset_timestep PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_represent_as_closest_with_cutoff PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_read_higher_freq_timestep PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_iterate_through_trajectory PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_iterate_as_auxiliary_from_trajectory PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_auxiliary_read_ts_rewind PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_get_description PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_load_from_description PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_step_to_frame_out_of_bounds PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_step_to_frame_no_time_diff PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_step_to_frame_time_diff PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_go_to_step_fail PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_set_constant_dt[True] PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_set_constant_dt[False] PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_copy PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_changing_n_col_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_time_selector_out_of_range_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_data_selector_out_of_range_raises_ValueError PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_get_auxreader_for PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_reopen PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::test_xvg_bz2 PASSED [ 6%] 1613s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::test_xvg_file_bz2 PASSED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_base.py::test_coordinate_converterbase_warning PASSED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_base.py::test_converters_converterbase_no_warning PASSED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRequiresRDKit::test_converter_requires_rdkit PASSED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_coordinates[mol2_mol-1] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_coordinates[smiles_mol-3] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_no_coordinates SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_compare_mol2reader SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_no_atoms_attr SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[[H]] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[C] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[O] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[[He]] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[PRO-14-1] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[ILE-38-1] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[ALA-20-2] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[GLY-21-3] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_monomer_info[resid 1-0] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_monomer_info[resname LYS and name NZ-1] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_monomer_info[resid 34 and altloc B-2] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_identical_topology[mol2_mol] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_identical_topology[smiles_mol] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_raise_requires_elements SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_warn_guess_bonds SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_bonds_outside_sel SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_error_no_hydrogen SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_error_no_hydrogen_implicit SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_warning_no_hydrogen_force SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-N- N ] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-CA- CA ] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-CAT- CAT] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-N1- N1 ] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-CE2- CE2] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-C12- C12] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-HD12-HD12] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-C123-C123] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[altLocs-A-A] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[chainIDs-B-B] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[icodes-C-C] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[occupancies-0.5-0.5] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[resnames-LIG-LIG] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[resids-123-123] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[segindices-1-1] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[tempfactors-0.8-0.8] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_other_attributes[0] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_other_attributes[10] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_other_attributes[42] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_index_property[resname ALA] SKIPPED [ 6%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_index_property[resname PRO and segid A] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_assign_coordinates SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_assign_stereochemistry SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_trajectory_coords SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_nan_coords SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_cache SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_sanitize_fail_warning SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[C(-[H])(-[H])(-[H])-[H]-C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[C](-[H])(-[H])-[C](-[H])-[H]-C=C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[C]1(-[H])-[C](-[H])-[C](-[H])-[C](-[H])-[C](-[H])-[C]1(-[H])-c1ccccc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[C-[C](-[H])-[O]-C(=O)C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[H]-[C](-[O])-[N](-[H])-[H]-C(=O)N] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[N]-[C]-[H]-N#C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[C-[C](-[O]-[H])-[O]-CC(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[P](-[O]-[H])(-[O]-[H])(-[O]-[H])-[O]-P(O)(O)(O)=O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[P](-[O]-[H])(-[O]-[H])(-[O])-[O]-P([O-])(O)(O)=O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[P](-[O]-[H])(-[O])(-[O])-[O]-P([O-])([O-])(O)=O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[P](-[O])(-[O])(-[O])-[O]-P([O-])([O-])([O-])=O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[H]-[O]-[N]-[O]-ON=O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[N]-[C]-[O]-N#C[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[[C](-[H])(-[H])(-[H])-[O]-4--1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[[N]-[C]-[O]-2--1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[[N](-[H])(-[H])(-[H])-[H]-0-1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[C-[C](-[O])-[O]-3--1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[S](-[O]-[H])(-[O]-[H])(-[O])-[O]-S(=O)(=O)(O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[S](-[O]-[H])(-[O])(-[O])-[O]-S(=O)(=O)([O-])O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[S](-[O])(-[O])(-[O])-[O]-S(=O)(=O)([O-])[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C-[N](-[H])-[C](-[N](-[H])-[H])-[N](-[H])-[H]-CNC(N)=[N+](-[H])-[H]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[O]-[C](-[H])-[C](-[H])-[H]-C([O-])=C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C-[N](-[O])-[O]-C[N+](=O)[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C(-[N](-[O])-[O])-[N](-[O])-[O]-C([N+](=O)[O-])[N+](=O)[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C-[N](-[O])-[O].C-[N](-[O])-[O]-C[N+](=O)[O-].C[N+](=O)[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[C-](=O)-C-[C](=O)-C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[H]-[N-]-C-[H]-[N]-C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[O]-[C]1-[C](-[H])-[C](-[H])-[C](-[H])-[C](-[H])-[C](-[H])1-[O-]c1ccccc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[O]-[C]1-[C](-[H])-[C](-[H])-[C](-[H])-[C]1-[O]-[O-]C1=CC=CC1=O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[H]-[C]-[C]-[C](-[H])-[C](-[H])-[H]-C#CC=C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[H]-[C]-[C]-[C]-[C]-[H]-C#CC#C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-42-GetIntProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value1-GetIntProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value2-GetIntProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value3-GetIntProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value4-GetIntProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value5-GetIntProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value6-GetIntProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value7-GetIntProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value8-GetIntProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[charge-4.2-GetDoubleProp0] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[charge-value10-GetDoubleProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[charge-4.2-GetDoubleProp1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[type-C.3-GetProp] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ignore_prop SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_transfer_properties[c1ccc(cc1)-c1ccccc1-c1ccccc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_transfer_properties[c1cc[nH]c1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_transfer_properties[O=C([C@H](CC1=C[NH1+]=CN1)[NH3+])[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1ccc(cc1)-c1ccccc1-c1ccccc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1cc[nH]c1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1ccc(cc1)-c1ccc(-c2ccccc2)c(-c2ccccc2)c1-c1ccccc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1ccc2c(c1)c1ccccc1c1ccccc1c1ccccc1c1ccccc21] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1csc(c1)-c1ccoc1-c1cc[nH]c1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C1=C2C(=NC=N1)N=CN2] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CN1C=NC(=C1SC2=NC=NC3=C2NC=N3)[N+](=O)[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1c[nH]c(c1)-c1ccc(s1)-c1ccoc1-c1c[nH]cc1-c1ccccc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C=CC=CC=CC=CC=CC=C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NCCCCC([NH3+])C(=O)[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C=CC1=C(C)CCCC1(C)C)=CC=CC(C)=CC=[NH+]C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C#CC=C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C([C@H](CC1=CNC=N1)N)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C([C@H](CC1=CN=CN1)N)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C([C@H](CC1=C[NH1+]=CN1)[NH3+])[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CCOC(=O)c1cc2cc(C(=O)O)ccc2[nH]1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-][n+]1cccnc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[n+]1ccccc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[PH4+]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1nc[nH]n1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(=O)C=C(C)N] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)=CC=C[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=S(C)(C)=NC] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1ccc2c3ncn(Cc4ccco4)c(O)c-3nc2c1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CCCC/C=C/C#CC#CCCCCCCCC(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1c2c(=O)n3cccc(C)c3nc2n(C)c(=N)c1C(=O)NCc1cnccc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N#Cc1c[nH]c(C(=O)NC(=O)c2cc[n+]([O-])cc2)n1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[C@@H](Oc1cc(F)ccc1Nc1ncnc2cc(N=S3(=O)CCC3)cc(F)c12)C(=O)NCC#N] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-][n+]1onc2ccccc21] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1cc[n+](CC[n+]2ccc(C)cc2)cc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-]c1ccccc1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-]C=CC=CCC=CC=[N+](C)C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C=[N+](-[O-])-C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C-[N-]-C(=O)C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[C@H](N)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NCC(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC[C@H](C)[C@H](N)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)C[C@H](N)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C(O)[C@@H]1CCCN1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)[C@H](N)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1ccccc1)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1c[nH]c2ccccc12)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1ccc(O)cc1)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CC(=O)O)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CCC(=O)O)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N=C(N)NCCC[C@H](N)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1c[nH]cn1)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NCCCC[C@H](N)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CO)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[C@@H](O)[C@H](N)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CS)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CSCC[C@H](N)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NC(=O)C[C@H](N)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NC(=O)CC[C@H](N)C(=O)O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Nc1ncnc2c1ncn2[C@H]1C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1cn([C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)[nH]c1=O] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=c1ccn([C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)[nH]1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Nc1ccn([C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)n1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Nc1nc2c(ncn2[C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)[nH]1] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)NS(C)(=O)=Nc1ccc(-c2ccc(-c3nc4[nH]c(O[C@@H]5CO[C@@H]6[C@H](O)CO[C@H]56)nc4cc3Cl)cc2)cc1 CHEMBL4111464] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[n+]1c2ccccc2c(C(=O)O)c2[nH]c3ccc(Br)cc3c21 CHEMBL511591] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[n+]1ccccc1-c1ccc(NC(=O)c2ccc(C(=O)Nc3ccc(-c4cccc[n+]4C)cc3)cc2)cc1 CHEMBL3230729] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1ccc(/C(O)=C(/C([S-])=NCc2ccccc2)[n+]2cccc(CO)c2)cc1[N+](=O)[O-] CHEMBL1596426] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)(O)c1cc2c(cc1C(C)(C)O)-c1ccccc1-2 CHEMBL1990966] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-]/N=C1/c2ccccc2-c2nc3ccc(C(F)(F)F)cc3nc21 CHEMBL4557878] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N#Cc1c[nH]c(C(=O)Nc2ccc(-c3cccc[n+]3[O-])cc2C2=CCCCC2)n1 CHEMBL1172116] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-[N+]#N] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-N=[N+]=[N-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-[O+]=C] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-[N+]#[C-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_warn_conjugated_max_iter SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Li+]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Na+]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[K+]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Rb+]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Ag+]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Cs+]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Mg+2]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Ca+2]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Cu+2]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Zn+2]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Sr+2]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Ba+2]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Al+3]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Fe+2]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Cl-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[O-2]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Na+].[Cl-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_reorder_atoms[O=C([C@H](CC1=C[NH1+]=CN1)[NH3+])[O-]] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_reorder_atoms[O=S(C)(C)=NC] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_pdb_names SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_bond_stereo_not_stereoany[F/C(Br)=C(Cl)/I] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_bond_stereo_not_stereoany[F\\C(Br)=C(Cl)\\I] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_bond_stereo_not_stereoany[F-C(Br)=C(Cl)-I] SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_atom_sorter SKIPPED [ 7%] 1613s testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py::TestINPCRDReader::test_reader PASSED [ 7%] 1613s testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py::TestINPCRDReader::test_universe_inpcrd PASSED [ 7%] 1613s testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py::TestINPCRDReader::test_universe_restrt PASSED [ 7%] 1613s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_regular_repr PASSED [ 7%] 1614s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_truncated_repr PASSED [ 7%] 1614s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_next_trajectory PASSED [ 7%] 1614s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_n_atoms PASSED [ 7%] 1614s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_n_frames PASSED [ 7%] 1615s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_iteration PASSED [ 7%] 1615s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_jump_lastframe_trajectory PASSED [ 7%] 1615s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_slice_trajectory PASSED [ 7%] 1616s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_full_slice PASSED [ 7%] 1616s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_frame_numbering PASSED [ 7%] 1616s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_next_after_frame_numbering PASSED [ 7%] 1616s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_frame PASSED [ 7%] 1616s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_time PASSED [ 7%] 1617s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_write_dcd PASSED [ 7%] 1619s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transform_iteration PASSED [ 7%] 1620s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transform_slice PASSED [ 7%] 1620s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transform_switch PASSED [ 7%] 1620s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transfrom_rewind PASSED [ 7%] 1621s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderCommonDt::test_time PASSED [ 7%] 1622s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_all_format_tuples PASSED [ 7%] 1622s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_all_format_lammps PASSED [ 7%] 1624s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_format_tuples_and_format PASSED [ 7%] 1624s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_one_format_tuple PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_all_formats PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info0-xtc] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info0-trr] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info1-xtc] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info1-trr] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info2-xtc] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info2-trr] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info3-xtc] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info3-trr] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info4-xtc] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info4-trr] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info5-xtc] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info5-trr] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info6-xtc] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info6-trr] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info7-xtc] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info7-trr] PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_start_frames PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_missing PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_warning PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_interleaving_error PASSED [ 7%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_easy_trigger_warning PASSED [ 8%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_single_frames PASSED [ 8%] 1626s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_mixed_filetypes PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_unsupported_filetypes PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l0-ref0] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l1-ref1] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l2-ref2] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l3-ref3] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l4-ref4] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l0-ref0] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l1-ref1] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l2-ref2] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l3-ref3] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l4-ref4] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l5-ref5] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l6-ref6] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l7-ref7] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l8-ref8] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l9-ref9] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l10-ref10] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l11-ref11] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l12-ref12] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l13-ref13] PASSED [ 8%] 1627s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l14-ref14] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_issue_4008 PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_issue_3349 PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader0] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader1] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader2] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader3] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader4] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader5] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader6] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader7] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader8] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader9] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader10] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader11] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader12] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader13] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader14] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader15] PASSED [ 8%] 1628s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader16] PASSED [ 8%] 1629s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader17] PASSED [ 8%] 1629s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader18] PASSED [ 8%] 1629s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader19] PASSED [ 8%] 1629s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader20] PASSED [ 8%] 1629s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader21] PASSED [ 8%] 1630s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader22] PASSED [ 8%] 1630s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader23] PASSED [ 8%] 1630s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader24] PASSED [ 8%] 1630s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader25] PASSED [ 8%] 1630s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader26] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader0] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader1] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader2] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader3] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader4] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader5] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader6] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader7] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader8] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader9] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader10] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader11] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader12] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader13] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader14] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader15] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader16] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader17] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader18] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader19] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader20] PASSED [ 8%] 1631s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader21] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader22] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader23] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader24] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader25] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader26] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args0] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args1] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args2] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args3] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args4] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args5] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args6] PASSED [ 8%] 1633s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args7] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args8] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args9] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args10] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args11] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args12] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args13] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args14] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args15] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args16] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args17] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args18] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args19] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args20] PASSED [ 8%] 1634s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args21] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args22] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args23] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args24] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args25] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args26] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader0] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader1] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader2] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader3] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader4] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader5] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader6] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader7] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader8] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader9] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader10] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader11] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader12] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader13] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader14] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader15] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader16] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader17] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader18] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader19] SKIPPED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader20] PASSED [ 8%] 1636s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader21] PASSED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader22] PASSED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader23] SKIPPED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader24] PASSED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader25] SKIPPED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader26] SKIPPED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader0] SKIPPED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader1] SKIPPED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader2] PASSED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader3] SKIPPED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader4] SKIPPED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader5] PASSED [ 8%] 1638s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader6] SKIPPED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader7] PASSED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader8] SKIPPED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader9] SKIPPED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader10] PASSED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader11] SKIPPED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader12] SKIPPED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader13] SKIPPED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader14] PASSED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader15] PASSED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader16] PASSED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader17] PASSED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader18] SKIPPED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader19] SKIPPED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader20] PASSED [ 8%] 1639s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader21] PASSED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader22] PASSED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader23] SKIPPED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader24] PASSED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader25] SKIPPED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader26] SKIPPED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader0] SKIPPED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader1] SKIPPED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader2] PASSED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader3] SKIPPED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader4] SKIPPED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader5] PASSED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader6] SKIPPED [ 8%] 1642s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader7] PASSED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader8] SKIPPED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader9] SKIPPED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader10] PASSED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader11] SKIPPED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader12] SKIPPED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader13] SKIPPED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader14] PASSED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader15] PASSED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader16] PASSED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader17] PASSED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader18] SKIPPED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader19] SKIPPED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader20] PASSED [ 8%] 1643s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader21] SKIPPED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader22] PASSED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader23] SKIPPED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader24] SKIPPED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader25] SKIPPED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader26] SKIPPED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader0] PASSED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader1] PASSED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader2] PASSED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader3] PASSED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader4] PASSED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader5] PASSED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader6] PASSED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader7] PASSED [ 8%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader8] PASSED [ 9%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader9] PASSED [ 9%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader10] PASSED [ 9%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader11] PASSED [ 9%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader12] PASSED [ 9%] 1646s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader13] PASSED [ 9%] 1647s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader14] PASSED [ 9%] 1647s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader15] PASSED [ 9%] 1647s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader16] PASSED [ 9%] 1647s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader17] PASSED [ 9%] 1647s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader18] PASSED [ 9%] 1647s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader19] PASSED [ 9%] 1647s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader20] PASSED [ 9%] 1647s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader21] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader22] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader23] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader24] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader25] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_timestep_copied[ref_reader26] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader0] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader1] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader2] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader3] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader4] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader5] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader6] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader7] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader8] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader9] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader10] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader11] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader12] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader13] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader14] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader15] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader16] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader17] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader18] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader19] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader20] PASSED [ 9%] 1649s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader21] PASSED [ 9%] 1651s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader22] PASSED [ 9%] 1651s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader23] PASSED [ 9%] 1651s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader24] PASSED [ 9%] 1651s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader25] PASSED [ 9%] 1651s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader26] PASSED [ 9%] 1651s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_copy_with_auxiliary_no_pyedr PASSED [ 9%] 1651s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_copy_with_auxiliary_pyedr SKIPPED [ 9%] 1651s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_atoms[test.crd] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_atoms[test.crd.bz2] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_atoms[test.crd.gz] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_roundtrip PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_EXT PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_EXT_read PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[resnames] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[resids] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[names] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[tempfactors] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[resnames] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[resids] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[names] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[tempfactors] PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_n_atoms PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_n_frames PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_first_frame PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_double_close PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_get_writer_1 PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_get_writer_2 PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_dt PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_ts_dt_matches_reader PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_total_time PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_first_dimensions PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_changing_dimensions PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_volume PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_add_same_auxname_raises_ValueError PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_remove_auxiliary PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_auxiliary PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_get_aux_attribute PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_as_aux_cutoff PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_reload_auxiliaries_from_description PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_stop_iter PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_iter PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_2iter PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_slice PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_switch_frame PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformation_rewind PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_copy PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_add_another_transformations_raises_ValueError PASSED [ 9%] 1652s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_pickle_reader PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_frame_collect_all_same XFAIL [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[fac] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[fca] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[afc] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[acf] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[caf] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_shape[cfa] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_values[slice0] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_values[slice1] SKIPPED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_values[slice2] SKIPPED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_asel_shape[index 1] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_asel_shape[index 2] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_empty_asel PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_empty_atomgroup PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_asel_warns_deprecation PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_atomgroup PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_timeseries_atomgroup_asel_mutex PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_last_frame PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_go_over_last_frame PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_frame_jump PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_frame_jump_issue1942 PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_next_gives_second_frame PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_reopen PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_rename_aux PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_as_aux_highf PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_as_aux_lowf PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_rewinds[indexed] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_rewinds[sliced] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_iter_rewinds[all] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_pickle_next_ts_reader PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_pickle_last_ts_reader PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_empty_dcd PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_with_statement PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_set_time PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_istart[0] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_istart[1] PASSED [ 9%] 1653s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_istart[2] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_istart[37] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_istart[None] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_different_box PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_trajectory_atomgroup PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_trajectory_universe PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_selection PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_none PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_no_container PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_not_changing_ts PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_random_unitcell PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_empty_dimension_warning PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_rewind PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_next PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_jump_last_frame PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_slice[5-17-3] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_slice[20-5--1] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_array_like[list] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_array_like[array] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_list_indices[indices0] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_list_indices[indices1] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice0-98] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice1-98] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice2-98] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice3-98] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice4-98] PASSED [ 9%] 1654s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice5-2] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice6-10] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice7-8] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice8-1] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice9-0] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice10-1] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice11-1] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice12-2] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice13-1] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice14-1] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice15-2] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice16-4] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice17-3] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_slices[slice18-2] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[fac-shape0] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[fca-shape1] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[afc-shape2] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[acf-shape3] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[caf-shape4] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_order[cfa-shape5] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_atomindices[indices0] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_atomindices[indices1] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_timeseries_atomindices[indices2] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_reader_set_dt PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_writer_dt[dcd-4] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_writer_dt[xtc-3] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_DCDWriter_default[istart-0] PASSED [ 9%] 1655s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_DCDWriter_default[nsavc-1] PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_other_writer[dcd-5] PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_other_writer[xtc-2] PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_single_frame PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_no_natoms PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_writer_trajectory_no_natoms PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_read_unitcell_triclinic[RefCHARMMtriclinicDCD] PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_read_unitcell_triclinic[RefNAMDtriclinicDCD] PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_unitcell_triclinic[RefCHARMMtriclinicDCD] PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_unitcell_triclinic[RefNAMDtriclinicDCD] PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ncdf2dcd_unitcell PASSED [ 9%] 1656s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ncdf2dcd_coords PASSED [ 9%] 1657s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe0] PASSED [ 9%] 1657s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe1] PASSED [ 9%] 1657s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe2] PASSED [ 9%] 1657s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe3] PASSED [ 9%] 1657s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_pathlib PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_large_dcdfile SKIPPED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_read_unitcell PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_positions PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_velocities PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_forces PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_read PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_read_unitcell PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_positions PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_velocities PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_forces PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_positions PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_read_unitcell PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_velocities PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_forces PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_names PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_pos PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_vel PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_for PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_number PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_names PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_pos PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_number PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_vel PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_for PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_len PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_getting PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_slicing PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_slicing_2 PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_position PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_velocity PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_force PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_unitcell PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_len PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_getting PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_slicing PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_slicing_2 PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_position PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_velocity PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_force PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_unitcell PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_len PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_getting PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_slicing PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_slicing_2 PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_position PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_velocity PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_force PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_unitcell PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_len PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_getting PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_slicing PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_slicing_2 PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_position PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_unitcell PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_velocity PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_force PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_global_cell PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_velocities PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_number_of_coords PASSED [ 10%] 1657s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_coords_atom_0 PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_n_frames PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_time PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_frame PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_frame_index_0 PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_frame_index_1_raises_IndexError PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_single_file PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_uses_FHIAIMSReader PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_dimensions PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_n_atoms PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_fhiaims_positions PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_n_frames PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_time PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_missing_periodicity PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_relative_positions_no_box PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_missing_velocity PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_velocity_wrong_position PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_wrong_input_line PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_good_input_with_velocity PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_mixed_units PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_different_box PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_trajectory_atomgroup PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_trajectory_universe PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_selection PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_none PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_no_container PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_not_changing_ts PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer_with_velocity PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer_no_atom_names PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer_with_n_atoms_none PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_n_frames PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_random_access PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_rewind PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_next PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_dt PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_step5distances PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_n_frames PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_random_access PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_rewind PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_next PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_dt PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_step5distances PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_n_frames PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_random_access PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_rewind PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_next PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_dt PASSED [ 10%] 1658s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_step5distances PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_load_gro PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_coordinates PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_distances PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_selection PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_unitcell PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_coordinates PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_distances PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_unitcell PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_volume PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_n_atoms PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_n_frames PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_first_frame PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_double_close PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_get_writer_1 PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_get_writer_2 PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_dt PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_ts_dt_matches_reader PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_total_time PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_first_dimensions PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_changing_dimensions PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_volume PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_iter PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_add_same_auxname_raises_ValueError PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_remove_auxiliary PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_iter_auxiliary PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_get_aux_attribute PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_iter_as_aux_cutoff PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_reload_auxiliaries_from_description PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_stop_iter PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_iter PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_2iter PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_slice PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_switch_frame PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformation_rewind PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_copy PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_add_another_transformations_raises_ValueError PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_pickle_reader PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_frame_collect_all_same PASSED [ 10%] 1659s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[fac] PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[fca] PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[afc] PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[acf] PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[caf] PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_shape[cfa] PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_values[slice0] SKIPPED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_values[slice1] SKIPPED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_values[slice2] SKIPPED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_asel_shape[index 1] PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_asel_shape[index 2] PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_empty_asel PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_empty_atomgroup PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_asel_warns_deprecation PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_atomgroup PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_timeseries_atomgroup_asel_mutex PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_time PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_full_slice PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_different_box PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_trajectory_atomgroup PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_trajectory_universe PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_selection PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_none PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_no_container PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_not_changing_ts PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_velocities PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_no_resnames PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_no_resids PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_writer_no_atom_names PASSED [ 10%] 1660s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_check_coordinate_limits_min PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_check_coordinate_limits_max PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_check_coordinate_limits_max_noconversion PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_n_atoms PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_n_frames PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_first_frame PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_double_close PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_get_writer_1 PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_get_writer_2 PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_dt PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_ts_dt_matches_reader PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_total_time PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_first_dimensions PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_changing_dimensions PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_volume PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_iter PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_add_same_auxname_raises_ValueError PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_remove_auxiliary PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 10%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_iter_auxiliary PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_get_aux_attribute PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_iter_as_aux_cutoff PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_reload_auxiliaries_from_description PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_stop_iter PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_iter PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_2iter PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_slice PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_switch_frame PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformation_rewind PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_copy PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_add_another_transformations_raises_ValueError PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_pickle_reader PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_frame_collect_all_same PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[fac] PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[fca] PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[afc] PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[acf] PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[caf] PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_shape[cfa] PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_values[slice0] SKIPPED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_values[slice1] SKIPPED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_values[slice2] SKIPPED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_asel_shape[index 1] PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_asel_shape[index 2] PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_asel_shape[index 1 to 3] PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_empty_asel PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_empty_atomgroup PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_asel_warns_deprecation PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_atomgroup PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_timeseries_atomgroup_asel_mutex PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_different_box PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_trajectory_atomgroup PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_trajectory_universe PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_selection PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_none PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_no_container PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_not_changing_ts PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_n_atoms PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_n_frames PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_first_frame PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_double_close PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_get_writer_1 PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_get_writer_2 PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_dt PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_ts_dt_matches_reader PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_total_time PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_first_dimensions PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_changing_dimensions PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_volume PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_iter PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_add_same_auxname_raises_ValueError PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_remove_auxiliary PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_iter_auxiliary PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_get_aux_attribute PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_iter_as_aux_cutoff PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_reload_auxiliaries_from_description PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_stop_iter PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_iter PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_2iter PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_slice PASSED [ 11%] 1661s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_switch_frame PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformation_rewind PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_copy PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_add_another_transformations_raises_ValueError PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_pickle_reader PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_frame_collect_all_same PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[fac] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[fca] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[afc] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[acf] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[caf] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_shape[cfa] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_values[slice0] SKIPPED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_values[slice1] SKIPPED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_values[slice2] SKIPPED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_asel_shape[index 1] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_asel_shape[index 2] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_asel_shape[index 1 to 3] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_empty_asel PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_empty_atomgroup PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_asel_warns_deprecation PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_atomgroup PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_timeseries_atomgroup_asel_mutex PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_different_box PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_trajectory_atomgroup PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_trajectory_universe PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_selection PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_none PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_no_container PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_not_changing_ts PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_n_atoms PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_n_frames PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_first_frame PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_double_close PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_get_writer_1 PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_get_writer_2 PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_dt PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_ts_dt_matches_reader PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_total_time PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_first_dimensions PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_changing_dimensions PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_volume PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_iter PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_add_same_auxname_raises_ValueError PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_remove_auxiliary PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_iter_auxiliary PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_get_aux_attribute PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_iter_as_aux_cutoff PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_reload_auxiliaries_from_description PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_stop_iter PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_iter PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_2iter PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_slice PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_switch_frame PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformation_rewind PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_copy PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_add_another_transformations_raises_ValueError PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_pickle_reader PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_frame_collect_all_same PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[fac] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[fca] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[afc] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[acf] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[caf] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_shape[cfa] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_values[slice0] SKIPPED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_values[slice1] SKIPPED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_values[slice2] SKIPPED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_asel_shape[index 1] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_asel_shape[index 2] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_empty_asel PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_empty_atomgroup PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_asel_warns_deprecation PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_atomgroup PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_timeseries_atomgroup_asel_mutex PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_different_box PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_trajectory_atomgroup PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_trajectory_universe PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_selection PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_none PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_no_container PASSED [ 11%] 1662s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_not_changing_ts PASSED [ 11%] 1664s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_different_box PASSED [ 11%] 1671s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_trajectory_atomgroup PASSED [ 11%] 1678s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_trajectory_universe PASSED [ 11%] 1683s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_selection PASSED [ 11%] 1683s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_none PASSED [ 11%] 1683s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_no_container PASSED [ 11%] 1686s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_not_changing_ts PASSED [ 11%] 1692s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_writer_large PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_writer_large_residue_count PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_growriter_resid_truncation PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_growriter_resid_true PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_growriter_resid_false PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_writer_resid_false PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_writer_resid_true PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_multiframe_gro PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_huge_box_gro PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[1] PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[2] PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[4] PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[5] PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[6] PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[7] PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[8] PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_gro_empty_box_write_read PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gsd.py::test_no_gsd_u_raises SKIPPED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gsd.py::test_gsd_reader_raises SKIPPED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_positions PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_n_frames PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_dimensions PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_data_step PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_n_atoms PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_n_frames PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_first_frame PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_double_close PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_dt PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_ts_dt_matches_reader PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_total_time PASSED [ 11%] 1695s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_first_dimensions PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_changing_dimensions PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_volume PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_add_same_auxname_raises_ValueError PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_remove_auxiliary PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_auxiliary PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_get_aux_attribute PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_as_aux_cutoff PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_reload_auxiliaries_from_description PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_stop_iter PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_iter PASSED [ 11%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_2iter PASSED [ 12%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_slice PASSED [ 12%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_switch_frame PASSED [ 12%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformation_rewind PASSED [ 12%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_copy PASSED [ 12%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_add_another_transformations_raises_ValueError PASSED [ 12%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_pickle_reader PASSED [ 12%] 1696s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_frame_collect_all_same PASSED [ 12%] 1697s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[fac] PASSED [ 12%] 1697s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[fca] PASSED [ 12%] 1697s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[afc] PASSED [ 12%] 1697s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[acf] PASSED [ 12%] 1697s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[caf] PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_shape[cfa] PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_values[slice0] PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_values[slice1] SKIPPED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_values[slice2] SKIPPED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_asel_shape[index 1] PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_asel_shape[index 2] PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_asel_shape[index 1 to 3] PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_empty_asel PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_empty_atomgroup PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_asel_warns_deprecation PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_atomgroup PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_timeseries_atomgroup_asel_mutex PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_last_frame PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_go_over_last_frame PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_frame_jump PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_frame_jump_issue1942 PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_next_gives_second_frame PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_reopen PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_rename_aux PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_as_aux_highf PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_as_aux_lowf PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_rewinds[indexed] PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_rewinds[sliced] PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_iter_rewinds[all] PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_pickle_next_ts_reader PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_pickle_last_ts_reader PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_get_writer_1 PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_get_writer_2 PASSED [ 12%] 1698s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_copying PASSED [ 12%] 1699s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_different_box PASSED [ 12%] 1699s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_selection PASSED [ 12%] 1699s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_none PASSED [ 12%] 1699s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_no_container PASSED [ 12%] 1699s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_not_changing_ts PASSED [ 12%] 1699s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_trajectory_atomgroup PASSED [ 12%] 1699s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_trajectory_universe PASSED [ 12%] 1699s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_n_frames PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_positions PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_velocities PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_forces PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_dimensions PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_data_step PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_rewind PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_next PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_jump_last_frame PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_slice[0-2-1] PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_slice[1-2-1] PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_array_like[list] PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_array_like[array] PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_list_indices PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_group[position-positions] PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_group[velocity-velocities] PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_group[force-forces] PASSED [ 12%] 1700s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[position/value] PASSED [ 12%] 1701s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[position/time] PASSED [ 12%] 1701s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[velocity/value] PASSED [ 12%] 1701s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[force/value] PASSED [ 12%] 1701s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_length_unit_from_box PASSED [ 12%] 1701s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_changing_n_atoms[position] PASSED [ 12%] 1701s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_changing_n_atoms[velocity] PASSED [ 12%] 1702s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_changing_n_atoms[force] PASSED [ 12%] 1702s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_2D_box PASSED [ 12%] 1702s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_box_vector PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_box PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_groups PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_convert_units PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_units_but_convert_units_true_error PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_open_filestream XFAIL [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_wrong_driver PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_open_with_driver PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms[velocity-force] PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms[position-force] PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms[position-velocity] PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms_error PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_n_atoms_errors[0-ValueError-H5MDWriter: no atoms in output trajectory] PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_n_atoms_errors[0.5-OSError-H5MDWriter: Timestep does not have] PASSED [ 12%] 1703s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_chunk_error PASSED [ 12%] 1704s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_dimensions[None] PASSED [ 12%] 1704s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_dimensions[0] PASSED [ 12%] 1705s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_step_not_monotonic PASSED [ 12%] 1705s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_step_from_frame PASSED [ 12%] 1705s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_has_property PASSED [ 12%] 1706s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-False-False] PASSED [ 12%] 1706s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-True-False] PASSED [ 12%] 1707s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-False-True] PASSED [ 12%] 1707s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-True-True] PASSED [ 12%] 1707s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[False-True-True] PASSED [ 12%] 1708s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[False-False-True] PASSED [ 12%] 1708s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[False-False-False] PASSED [ 12%] 1708s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_AtomGroup_with PASSED [ 12%] 1708s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_ag_write[None-1] PASSED [ 12%] 1709s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_ag_write[all-3] PASSED [ 12%] 1709s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[fs-Angstrom-Angstrom/ps-kJ/(mol*Angstrom)] PASSED [ 12%] 1709s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[s-pm-m/s-Newton] PASSED [ 12%] 1710s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[ps-fm-Angstrom/fs-kcal/(mol*Angstrom)] PASSED [ 12%] 1710s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[AKMA-nm-Angstrom/AKMA-kcal/(mol*Angstrom)] PASSED [ 12%] 1710s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[imaginary time-None-None-None] PASSED [ 12%] 1710s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[None-None-c-None] PASSED [ 12%] 1711s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[None-None-None-HUGE FORCE] PASSED [ 12%] 1711s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[None-lightyear-None-None] PASSED [ 12%] 1711s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_units_w_convert_true PASSED [ 12%] 1711s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_units_w_convert_false PASSED [ 12%] 1712s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_convert_units[True] PASSED [ 12%] 1712s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_convert_units[False] PASSED [ 12%] 1713s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks[chunks0] PASSED [ 12%] 1713s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks[chunks1] PASSED [ 12%] 1714s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks[chunks2] PASSED [ 12%] 1715s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks_with_nframes PASSED [ 12%] 1715s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_contiguous1 PASSED [ 12%] 1715s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_contiguous2 PASSED [ 12%] 1716s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_compression[gzip-1] PASSED [ 12%] 1716s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_compression[gzip-9] PASSED [ 12%] 1717s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_compression[lzf-None] PASSED [ 12%] 1717s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_drivers[core] PASSED [ 12%] 1717s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_drivers[stdio] PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_parallel_disabled PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_timestep_not_modified_by_writer PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5PYNotInstalled::test_reader_no_h5py PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5PYNotInstalled::test_writer_no_h5py PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithObservables::test_read_h5md_issue4598 PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithObservables::test_read_h5md_malformed PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datareader_ValueError PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_n_atoms PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_coords PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_velos PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_dimensions PASSED [ 12%] 1718s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_singleframe PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_seek PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_seek_2 PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_iter PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_n_atoms PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_coords PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_velos PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_dimensions PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_singleframe PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_seek PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_seek_2 PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_iter PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_unwrap_vel_force PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_unwrap_image_wrap PASSED [ 12%] 1719s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_unwrap_no_image PASSED [ 12%] 1721s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 12%] 1721s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-bonds] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-angles] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-dihedrals] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-impropers] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-masses] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-charges] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-velocities] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-positions] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-masses] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-charges] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-velocities] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-positions] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-bonds] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-angles] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-dihedrals] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-impropers] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-masses] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-charges] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-velocities] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-positions] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-masses] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-charges] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-velocities] PASSED [ 12%] 1722s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/mini.data-positions] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-bonds] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-angles] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-dihedrals] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-impropers] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-masses] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-charges] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-velocities] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-positions] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 12%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-masses] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-charges] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-velocities] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-positions] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-bonds] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-angles] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-dihedrals] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-impropers] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-masses] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-charges] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-velocities] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-positions] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-masses] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-charges] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-velocities] PASSED [ 13%] 1723s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-positions] PASSED [ 13%] 1725s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag0] PASSED [ 13%] 1725s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag1] PASSED [ 13%] 1725s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag2] PASSED [ 13%] 1725s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag3] PASSED [ 13%] 1728s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag4] PASSED [ 13%] 1728s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datawriter_universe[out.data] PASSED [ 13%] 1728s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datawriter_universe[out.data.bz2] PASSED [ 13%] 1728s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datawriter_universe[out.data.gz] PASSED [ 13%] 1728s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[masses] PASSED [ 13%] 1729s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[charges] PASSED [ 13%] 1729s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[velocities] PASSED [ 13%] 1729s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[positions] PASSED [ 13%] 1730s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_n_bonds PASSED [ 13%] 1731s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_n_angles PASSED [ 13%] 1731s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_Reader_is_LAMMPS PASSED [ 13%] 1731s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_n_atoms PASSED [ 13%] 1731s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_n_frames PASSED [ 13%] 1731s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_dimensions PASSED [ 13%] 1731s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_dt PASSED [ 13%] 1731s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_Timestep_time PASSED [ 13%] 1731s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_LAMMPSDCDReader_set_dt PASSED [ 13%] 1731s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_wrong_time_unit PASSED [ 13%] 1732s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_wrong_unit PASSED [ 13%] 1732s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_Writer_is_LAMMPS PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_Writer PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_OtherWriter_is_LAMMPS PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_OtherWriter PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_Writer_is_LAMMPS PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_open PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_wrong_time_unit PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_wrong_unit PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_triclinicness PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestDataWriterErrors::test_write_no_masses PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestDataWriterErrors::test_write_no_types PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestDataWriterErrors::test_write_non_numerical_types PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_n_atoms[ascii] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_n_atoms[bz2] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_n_atoms[gzip] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_length[ascii] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_length[bz2] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_length[gzip] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_seeking[ascii] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_seeking[bz2] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_seeking[gzip] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_boxsize[ascii] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_boxsize[bz2] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_boxsize[gzip] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_atom_reordering[ascii] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_atom_reordering[bz2] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_atom_reordering[gzip] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_true-fields0] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_single-fields1] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_multiple-fields2] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_wrong_format_additional_colums[u_additional_columns_wrong_format] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_warning[u_additional_columns_not_present] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_absent_convention_fails[unscaled] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_absent_convention_fails[unwrapped] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_absent_convention_fails[scaled_unwrapped] PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_incorrect_convention_fails PASSED [ 13%] 1733s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[auto-unscaled] PASSED [ 13%] 1734s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[unscaled-unscaled] PASSED [ 13%] 1735s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[scaled-scaled] PASSED [ 13%] 1736s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[unwrapped-unwrapped] PASSED [ 13%] 1737s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[scaled_unwrapped-scaled_unwrapped] PASSED [ 13%] 1737s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_no_coordinate_info PASSED [ 13%] 1741s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_unscaled_reference PASSED [ 13%] 1746s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_scaled_reference PASSED [ 13%] 1750s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_unwrapped_scaled_reference PASSED [ 13%] 1756s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_scaled_unscaled_match PASSED [ 13%] 1762s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_unwrapped_scaled_unwrapped_match PASSED [ 13%] 1767s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_auto_is_unscaled_match PASSED [ 13%] 1767s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsTriclinic::test_box PASSED [ 13%] 1767s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_n_atoms PASSED [ 13%] 1768s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_n_frames PASSED [ 13%] 1768s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_first_frame PASSED [ 13%] 1768s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_double_close PASSED [ 13%] 1768s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_dt PASSED [ 13%] 1768s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_ts_dt_matches_reader PASSED [ 13%] 1768s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_total_time PASSED [ 13%] 1768s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_first_dimensions PASSED [ 13%] 1768s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_changing_dimensions PASSED [ 13%] 1769s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_volume PASSED [ 13%] 1769s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter PASSED [ 13%] 1769s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_add_same_auxname_raises_ValueError PASSED [ 13%] 1769s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_remove_auxiliary PASSED [ 13%] 1769s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 13%] 1769s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_auxiliary PASSED [ 13%] 1769s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_get_aux_attribute PASSED [ 13%] 1769s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_as_aux_cutoff PASSED [ 13%] 1770s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_reload_auxiliaries_from_description PASSED [ 13%] 1770s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_stop_iter PASSED [ 13%] 1770s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_iter PASSED [ 13%] 1771s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_2iter PASSED [ 13%] 1771s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_slice PASSED [ 13%] 1771s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_switch_frame PASSED [ 13%] 1772s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformation_rewind PASSED [ 13%] 1772s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_copy PASSED [ 13%] 1772s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_add_another_transformations_raises_ValueError PASSED [ 13%] 1773s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_pickle_reader PASSED [ 13%] 1773s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_frame_collect_all_same XFAIL [ 13%] 1773s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[fac] PASSED [ 13%] 1773s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[fca] PASSED [ 13%] 1773s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[afc] PASSED [ 13%] 1773s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[acf] PASSED [ 13%] 1773s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[caf] PASSED [ 13%] 1773s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_shape[cfa] PASSED [ 13%] 1774s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_values[slice0] XFAIL [ 13%] 1774s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_values[slice1] XFAIL [ 13%] 1774s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_values[slice2] XFAIL [ 13%] 1774s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_asel_shape[index 1] PASSED [ 13%] 1774s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_asel_shape[index 2] PASSED [ 13%] 1774s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 13%] 1774s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_empty_asel PASSED [ 13%] 1774s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_empty_atomgroup PASSED [ 13%] 1775s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_last_frame PASSED [ 13%] 1775s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_go_over_last_frame PASSED [ 13%] 1775s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_frame_jump PASSED [ 13%] 1775s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_frame_jump_issue1942 PASSED [ 13%] 1775s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_next_gives_second_frame PASSED [ 13%] 1775s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_reopen PASSED [ 13%] 1775s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_rename_aux PASSED [ 13%] 1775s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_as_aux_highf PASSED [ 13%] 1776s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_as_aux_lowf PASSED [ 13%] 1776s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_rewinds[indexed] PASSED [ 13%] 1776s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_rewinds[sliced] PASSED [ 13%] 1776s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iter_rewinds[all] PASSED [ 13%] 1776s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_pickle_next_ts_reader PASSED [ 13%] 1776s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_pickle_last_ts_reader PASSED [ 13%] 1776s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_filename_transefer_to_memory PASSED [ 13%] 1777s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_filename_array PASSED [ 13%] 1777s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_default_memory_layout PASSED [ 13%] 1777s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_iteration PASSED [ 13%] 1777s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_afc PASSED [ 13%] 1777s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_fac PASSED [ 13%] 1777s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_cfa PASSED [ 13%] 1777s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_acf PASSED [ 13%] 1778s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_fca PASSED [ 13%] 1778s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_caf PASSED [ 13%] 1778s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_skip1 PASSED [ 13%] 1778s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_skip10 PASSED [ 13%] 1778s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_view PASSED [ 13%] 1778s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_subarray_view PASSED [ 13%] 1778s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_view_from_universe_atoms PASSED [ 13%] 1778s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_view_from_select_all PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_noview PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_repr PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_get_writer_1 PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_get_writer_2 PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_float32 PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_position_assignation PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_warns_deprecation PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_asel_warns_deprecation PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_atomgroup PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_timeseries_atomgroup_asel_mutex PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[2d-2d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[2d-3d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[3d-2d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[3d-3d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[2d-2d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[2d-3d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[3d-2d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[3d-3d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-2d-2d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-2d-3d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-3d-2d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-3d-3d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-2d-2d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-2d-3d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-3d-2d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-3d-3d] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[2d-velocities] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[2d-forces] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[3d-velocities] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[3d-forces] PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_single_box PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_varying_box PASSED [ 13%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_wrong_length PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_wrong_shape PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[positions] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[velocities] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[forces] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[dimensions] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[positions] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[velocities] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[forces] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[dimensions] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_non_numpy_arr[velocities] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_non_numpy_arr[forces] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_non_numpy_arr[dimensions] PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_read_frame_size PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_read_positions PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_velocities PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_forces PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_len PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_read_frame_size PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_read_positions PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_velocities PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_forces PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_len PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::test_dimensionless PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::test_deprecation PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_read PASSED [ 14%] 1779s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_read_statusbit PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_write PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_write_selection PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_write_in_loop PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_broken_molecule PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_comments_header PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_no_bonds PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_jump_lastframe_traj PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_jump_traj PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_n_frames PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_next_traj PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_reverse_traj PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_rewind_traj PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_slice_traj PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMOL2NoSubstructure::test_load PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMOL2NoSubstructure::test_universe PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMOL2NoSubstructure::test_write_nostructure PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::test_mol2_write_NIE PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::test_mol2_multi_write PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_mol2.py::test_mol2_universe_write PASSED [ 14%] 1780s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_coordinates PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_distances PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_dt PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_frame PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_frame_index_0 PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_frame_index_1_raises_IndexError PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_full_slice PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_get_writer_from_reader PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_last_slice PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_load_file PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_n_atoms PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_n_frames PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_numres PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_parse_n_atoms PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_pickle_singleframe_reader PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::TestNAMDBINReader::test_time PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_different_box PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_trajectory_atomgroup PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_trajectory_universe PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_selection PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_none PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_no_container PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_namdbin.py::NAMDBINWriter::test_write_not_changing_ts PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_load_prm PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_n_atoms PASSED [ 14%] 1781s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_n_frames PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_periodic PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_amber_proteinselection PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_sum_centres_of_geometry PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_initial_frame_is_0 PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_starts_with_first_frame PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_rewind PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_full_slice PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_random_access PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_slice_iteration PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_metadata PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_dt PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_get_writer PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_get_writer_custom_n_atoms PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_wrong_natoms PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_read_on_closed PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_mmap_kwarg PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_load_prm PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_n_atoms PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_n_frames PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_periodic PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_amber_proteinselection PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_sum_centres_of_geometry PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_initial_frame_is_0 PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_starts_with_first_frame PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_rewind PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_full_slice PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_random_access PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_slice_iteration PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_metadata PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_dt PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_get_writer PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_get_writer_custom_n_atoms PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_wrong_natoms PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_read_on_closed PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_mmap_kwarg PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_load_prm PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_n_atoms PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_n_frames PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_periodic PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_amber_proteinselection PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_sum_centres_of_geometry PASSED [ 14%] 1782s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_initial_frame_is_0 PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_starts_with_first_frame PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_rewind PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_full_slice PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_random_access PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_slice_iteration PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_metadata PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_dt PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_get_writer PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_get_writer_custom_n_atoms PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_wrong_natoms PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_read_on_closed PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_mmap_kwarg PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_load_prm PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_n_atoms PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_n_frames PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_periodic PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_amber_proteinselection PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_sum_centres_of_geometry PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_initial_frame_is_0 PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_starts_with_first_frame PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_rewind PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_full_slice PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_random_access PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_slice_iteration PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_metadata PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_dt PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_get_writer PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_get_writer_custom_n_atoms PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_wrong_natoms PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_read_on_closed PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_mmap_kwarg PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_load_prm PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_n_atoms PASSED [ 14%] 1783s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_n_frames PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_periodic PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_amber_proteinselection PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_sum_centres_of_geometry PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_initial_frame_is_0 PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_starts_with_first_frame PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_rewind PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_full_slice PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_random_access PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_slice_iteration PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_metadata PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_dt PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_get_writer PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_get_writer_custom_n_atoms PASSED [ 14%] 1784s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_wrong_natoms PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_read_on_closed PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_mmap_kwarg PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_positions_1 PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_positions_2 PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_forces_1 PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_forces_2 PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_time_1 PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_time_2 PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_dt PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_box PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_positions[0-0] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_positions[8-1] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_forces[0-0] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_forces[8-1] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_velocities[0-0] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_velocities[8-1] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_time[0-1.0] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_time[8-9.0] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_nframes PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_dt PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_box[0-0] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_box[8-1] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader4::test_chain_times PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader4::test_dt PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader4::test_warn_user_no_time_information PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_coordinates PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_velocities PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_forces PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_box[mutation0-expected0] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_box[mutation1-expected1] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_not_float PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_type_errors[mutation0] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_type_errors[mutation1] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_type_errors[mutation2] PASSED [ 14%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation0] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation1] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation2] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation3] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation4] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation0] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation1] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation2] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation3] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation4] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation5] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation6] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_verify_units_errors[yard-foot] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_verify_units_errors[second-minute] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_ioerror PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_conventionversion_warn PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_program_warn[mutation0] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_program_warn[mutation1] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_no_dt_warning PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_write_trajectory_netCDF4 PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_write_trajectory_netcdf PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_OtherWriter[nc] PASSED [ 15%] 1785s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_OtherWriter[ncdf] PASSED [ 15%] 1786s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_TRR2NCDF PASSED [ 15%] 1786s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_write_AtomGroup PASSED [ 15%] 1786s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_write_trajectory_netCDF4 PASSED [ 15%] 1787s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_write_trajectory_netcdf PASSED [ 15%] 1787s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_OtherWriter[nc] PASSED [ 15%] 1787s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_OtherWriter[ncdf] PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_TRR2NCDF PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_write_AtomGroup PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-False-False] PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-True-False] PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-False-True] PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-True-True] PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_factors_default PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_bad_scale_factor PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_write[-2.0--2.0--2.0--2.0--2.0--2.0] PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_write[1.0-1.0-1.0-1.0-1.0-1.0] PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_write[2.0-4.0-8.0-16.0-32.0-64.0] PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_factors_default PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_bad_scale_factor PASSED [ 15%] 1788s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_write[-2.0--2.0--2.0--2.0--2.0--2.0] PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_write[1.0-1.0-1.0-1.0-1.0-1.0] PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_write[2.0-4.0-8.0-16.0-32.0-64.0] PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_ncdf4_not_present PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[coordinates-angstrom] PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[time-picosecond] PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[cell_lengths-angstrom] PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[cell_angles-degree] PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[velocities-angstrom/picosecond] PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[forces-kilocalorie/mole/angstrom] PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterErrorsWarnings::test_zero_atoms_VE PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterErrorsWarnings::test_wrong_n_atoms PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_null.py::test_NullWriter PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_ENT PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_coordinates PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_dimensions PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_distances PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_dt PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_frame PASSED [ 15%] 1789s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_frame_index_0 PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_frame_index_1_raises_IndexError PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_full_slice PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_last_slice PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_load_file PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_n_atoms PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_n_frames PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_numres PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_pickle_singleframe_reader PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_time PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_uses_PDBReader PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_HEADER PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_TITLE PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_COMPND PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_REMARK PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_coordinates PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_distances PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_dt PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_frame PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_frame_index_0 PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_frame_index_1_raises_IndexError PASSED [ 15%] 1790s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_full_slice PASSED [ 15%] 1791s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_last_slice PASSED [ 15%] 1791s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_load_file PASSED [ 15%] 1791s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_long_resSeq PASSED [ 15%] 1791s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_n_atoms PASSED [ 15%] 1791s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_n_frames PASSED [ 15%] 1791s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_numres PASSED [ 15%] 1791s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_pickle_singleframe_reader PASSED [ 15%] 1791s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_time PASSED [ 15%] 1792s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer PASSED [ 15%] 1792s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_resnames PASSED [ 15%] 1792s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_resids PASSED [ 15%] 1792s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_atom_names PASSED [ 15%] 1792s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_altlocs PASSED [ 15%] 1792s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_icodes PASSED [ 15%] 1792s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_segids PASSED [ 15%] 1792s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_occupancies PASSED [ 15%] 1792s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_tempfactors PASSED [ 15%] 1792s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_single_frame_Writer PASSED [ 15%] 1793s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_single_frame_AtomGroup PASSED [ 15%] 1793s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_nodims[universe_and_expected_dims0] PASSED [ 15%] 1793s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_nodims[universe_and_expected_dims1] PASSED [ 15%] 1794s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_coordinate_limits_min PASSED [ 15%] 1794s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_coordinate_limits_max PASSED [ 15%] 1794s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_HEADER_TITLE_multiframe PASSED [ 15%] 1794s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_MODEL_multiframe[0-12] PASSED [ 15%] 1795s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_MODEL_multiframe[9997-12] PASSED [ 15%] 1797s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_chainid_validated[@] PASSED [ 15%] 1799s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_chainid_validated[] PASSED [ 15%] 1801s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_chainid_validated[AA] PASSED [ 15%] 1802s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_stringio_outofrange PASSED [ 15%] 1802s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_hetatm_written PASSED [ 15%] 1802s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_default_atom_record_type_written PASSED [ 15%] 1802s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_abnormal_record_type PASSED [ 15%] 1803s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_no_reindex PASSED [ 15%] 1803s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_no_reindex_bonds PASSED [ 15%] 1804s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_reindex PASSED [ 15%] 1804s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_no_reindex_missing_ids PASSED [ 15%] 1804s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_n_frames PASSED [ 15%] 1804s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_n_atoms_frame PASSED [ 15%] 1804s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_rewind PASSED [ 15%] 1805s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_iteration PASSED [ 15%] 1805s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_slice_iteration PASSED [ 15%] 1808s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_conect_bonds_conect PASSED [ 15%] 1808s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_conect_error PASSED [ 15%] 1808s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_numconnections PASSED [ 15%] 1812s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_conect_bonds_all PASSED [ 15%] 1812s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_bonds_partial PASSED [ 15%] 1812s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_bonds_with_100000_ag_index PASSED [ 15%] 1812s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_atomselection PASSED [ 15%] 1812s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_all_timesteps PASSED [ 15%] 1812s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_loop PASSED [ 15%] 1813s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_atoms PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_load_pdb PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_selection PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_n_atoms PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_n_frames PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_time PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_frame PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_dt PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_coordinates PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_distances PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_unitcell PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_volume PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_n_residues PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_first_residue PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBVaryingOccTmp::test_ts_data_keys PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBVaryingOccTmp::test_varying_attrs[occupancy-occupancies-vals0] PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBVaryingOccTmp::test_varying_attrs[tempfactor-tempfactors-vals1] PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_natoms PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_coords PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_dims PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_names PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_residues PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_resnames PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_reading_trajectory PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBXLSerial::test_load PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBXLSerial::test_serials PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_coordinates PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_distances PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_dt PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_frame PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_frame_index_0 PASSED [ 15%] 1814s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_frame_index_1_raises_IndexError PASSED [ 15%] 1815s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_full_slice PASSED [ 15%] 1815s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_last_slice PASSED [ 15%] 1815s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_load_file PASSED [ 15%] 1815s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_n_atoms PASSED [ 15%] 1815s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_n_frames PASSED [ 15%] 1815s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_numres PASSED [ 15%] 1815s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_pickle_singleframe_reader PASSED [ 15%] 1815s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_time PASSED [ 15%] 1816s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_ENT PASSED [ 15%] 1816s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_coordinates PASSED [ 15%] 1816s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_dimensions PASSED [ 15%] 1816s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_distances PASSED [ 15%] 1816s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_dt PASSED [ 15%] 1816s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_frame PASSED [ 15%] 1816s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_frame_index_0 PASSED [ 15%] 1816s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_frame_index_1_raises_IndexError PASSED [ 15%] 1816s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_full_slice PASSED [ 15%] 1817s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_last_slice PASSED [ 15%] 1817s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_load_file PASSED [ 15%] 1817s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_n_atoms PASSED [ 15%] 1817s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_n_frames PASSED [ 15%] 1817s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_numres PASSED [ 15%] 1817s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_pickle_singleframe_reader PASSED [ 15%] 1817s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_time PASSED [ 15%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_uses_PDBReader PASSED [ 15%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_occupancies PASSED [ 15%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestWriterAlignments::test_atomname_alignment PASSED [ 15%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestWriterAlignments::test_atomtype_alignment PASSED [ 15%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom0- CA ] PASSED [ 15%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom1- OE1] PASSED [ 15%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom2-SE ] PASSED [ 15%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom3-CA ] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom4-FE ] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom5- P ] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_standalone_pdb PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_pdb_zero_atoms PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_atom_not_match PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_partially_missing_cryst PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_no_atoms_elements PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_atom_elements PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_elements_roundtrip PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_cryst_meaningless_warning PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_cryst_meaningless_select PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_roundtrip PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_not_int PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_limit[99] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_limit[-100] PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_segid PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_chainID PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_protein PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_backbone PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_neighborhood PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_n_frames PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_time PASSED [ 16%] 1818s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_frame PASSED [ 16%] 1819s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_writing_coords[test.pdbqt] PASSED [ 16%] 1819s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_writing_coords[test.pdbqt.bz2] PASSED [ 16%] 1819s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_writing_coords[test.pdbqt.gz] PASSED [ 16%] 1819s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_formatting PASSED [ 16%] 1819s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_write_no_charges PASSED [ 16%] 1819s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_write_no_chainids_with_segids PASSED [ 16%] 1819s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_get_writer PASSED [ 16%] 1819s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_ArgCACharges PASSED [ 16%] 1819s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_ProNCharges PASSED [ 16%] 1819s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_coordinates PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_dimensions PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_distances PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_dt PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_frame PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_frame_index_0 PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_frame_index_1_raises_IndexError PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_full_slice PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_hydrogenCharges PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_last_slice PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_load_file PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_n_atoms PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_n_frames PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_numres PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_pickle_singleframe_reader PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_time PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_total_charge PASSED [ 16%] 1820s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_simple_writer_roundtrip[test.pqr] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_simple_writer_roundtrip[test.pqr.bz2] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_simple_writer_roundtrip[test.pqr.gz] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_writer_noChainID PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_write_withChainID PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_timestep_not_modified_by_writer PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_total_charge PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_names_writing PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_resnames_writing PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_radii_writing PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_charges_writing PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_required_attributes PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_iter PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_close PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_rewind PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_context PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_len PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_raises_StopIteration PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_unknown_order_key[turnip] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_unknown_order_key[abc] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_incorrect_order_key[faac] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_incorrect_order_key[affc] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_incorrect_order_key[afcc] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_timeseries_raises_incorrect_order_key[] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-None-None] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-5-None] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[2-None-None] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[2-5-None] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-None-2] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-None--1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None--1--1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[10-0--1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-10-1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-10-2] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-20-None] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-20-2] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-5-2] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[5-None--1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-5--1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-10-1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[-10-None-1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-None--1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-5--20] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[5-1-1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[1-5--1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[-100-None-None] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-None-None] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[-2-10--2] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-0-1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[10-1-2] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice_VE_1 PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice_TE_1 PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl0-list] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl0-array] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl1-list] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl1-array] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl2-list] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl2-array] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl3-list] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl3-array] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl4-list] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl4-array] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl5-list] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl5-array] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl6-list] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl6-array] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl0] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl1] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl2] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl3] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl4] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl5] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl6] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl7] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl8] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl9] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl10] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl11] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl12] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl13] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl14] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len_empty[list] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len_empty[array] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl10] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl11] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl12] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl13] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl14] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl10] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl11] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl12] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl13] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl14] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl10] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl11] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl12] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl13] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl14] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl10] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl11] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl12] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl13] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl14] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl10] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl11] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl12] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl13] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl14] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl10] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl11] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl12] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl13] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl14] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl10] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl11] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl12] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl13] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl14] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl10] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl11] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl12] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl13] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl14] PASSED [ 16%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl10] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl11] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl12] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl13] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl14] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl10] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl11] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl12] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl13] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl14] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl15] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl10] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl11] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl12] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl13] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl14] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl15] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl10] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl11] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl12] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl13] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl14] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl15] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl10] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl11] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl12] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl13] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl14] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl15] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl10] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl11] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl12] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl13] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl14] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl15] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl10] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl11] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl12] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl13] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl14] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl15] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_list_TE PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_array_TE PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl10] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl11] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl12] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl13] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl14] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl10] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl11] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl12] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl13] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl14] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_required_attributes PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_iter PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_close PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_context PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_len PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_raises_StopIteration PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_unknown_order_key[turnip] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_unknown_order_key[abc] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_incorrect_order_key[faac] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_incorrect_order_key[affc] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_incorrect_order_key[afcc] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_timeseries_raises_incorrect_order_key[] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_next PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem_2 PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem_IE PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem_IE_2 PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_slice_1 PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_slice_2 PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_reopen PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_rewind PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_read_frame PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_iter_rewind PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_neg PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_neg_IE PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_pos_IE PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_slice PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_slice2 PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_ndarray PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_getitem_TE PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_len PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_iter PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_repr PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_repr_with_box PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_repr_no_box PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_default_dtype_npf32 PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dimensions PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dimensions_set_box[int] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dimensions_set_box[float32] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dimensions_set_box[float64] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_volume PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_triclinic_vectors PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_set_triclinic_vectors PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_set_dimensions_None PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_set_triclinic_dimensions_None PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_coordinate_getter_shortcuts PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_coordinate_setter_shortcuts PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_n_atoms PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_n_atoms_readonly PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_n_atoms_presence PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_unitcell_presence PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_data_presence PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_allocate_velocities PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_allocate_forces PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_velocities_remove PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_forces_remove PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_ts PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[True-True-True] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[True-True-False] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[True-False-True] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[True-False-False] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[False-True-True] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[False-True-False] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates[False-False-True] PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates_mismatch PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_coordinates_nodata PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_supply_dt PASSED [ 17%] 1821s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_redefine_dt PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_delete_dt PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_supply_time_offset PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_time PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_delete_time PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_time_with_offset PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dt PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_change_dt PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dt_with_offset PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_time_overrides_dt_with_offset PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy[_check_copy] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy[_check_independent] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy[_check_copy_slice_indices] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy[_check_copy_slice_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy[_check_npint_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts0-_check_copy] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts0-_check_independent] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts0-_check_copy_slice_indices] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts0-_check_copy_slice_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts0-_check_npint_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts1-_check_copy] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts1-_check_independent] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts1-_check_copy_slice_indices] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts1-_check_copy_slice_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts1-_check_npint_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts2-_check_copy] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts2-_check_independent] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts2-_check_copy_slice_indices] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts2-_check_copy_slice_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts2-_check_npint_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts3-_check_copy] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts3-_check_independent] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts3-_check_copy_slice_indices] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts3-_check_copy_slice_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts3-_check_npint_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts4-_check_copy] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts4-_check_independent] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts4-_check_copy_slice_indices] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts4-_check_copy_slice_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts4-_check_npint_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts5-_check_copy] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts5-_check_independent] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts5-_check_copy_slice_indices] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts5-_check_copy_slice_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts5-_check_npint_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts6-_check_copy] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts6-_check_independent] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts6-_check_copy_slice_indices] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts6-_check_copy_slice_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_copy_slice[some_ts6-_check_npint_slice] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts0] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts1] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts2] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts3] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts4] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts5] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_bad_slice[some_ts6] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts0] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts1] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts2] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts3] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts4] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts5] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_from_timestep[some_ts6] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[True-True-True] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[True-True-False] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[True-False-True] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[True-False-False] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[False-True-True] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[False-True-False] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_equal[False-False-True] PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_wrong_class_equality PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_wrong_frame_equality PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_wrong_n_atoms_equality PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_wrong_pos_equality PASSED [ 17%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_no_pos_inequality PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_vels_equality PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_mismatched_vels_equality PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_wrong_vels_equality PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_forces_equality PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_mismatched_forces_equality PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_check_wrong_forces_equality PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dims_mismatch_inequality[None] PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestTimestep::test_dims_mismatch_inequality[dim11] PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe0] PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe1] PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe2] PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe3] PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe4] PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe5] PASSED [ 18%] 1822s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe6] PASSED [ 18%] 1823s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe7] PASSED [ 18%] 1823s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe8] PASSED [ 18%] 1823s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe9] PASSED [ 18%] 1823s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe10] PASSED [ 18%] 1823s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe11] PASSED [ 18%] 1823s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe12] PASSED [ 18%] 1823s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe13] PASSED [ 18%] 1823s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe14] PASSED [ 18%] 1824s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe15] PASSED [ 18%] 1824s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe16] PASSED [ 18%] 1824s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe17] PASSED [ 18%] 1824s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_frame[universe18] PASSED [ 18%] 1824s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe0] PASSED [ 18%] 1824s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe1] PASSED [ 18%] 1824s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe2] PASSED [ 18%] 1824s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe3] PASSED [ 18%] 1824s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe4] PASSED [ 18%] 1825s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe5] PASSED [ 18%] 1825s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe6] PASSED [ 18%] 1825s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe7] PASSED [ 18%] 1825s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe8] PASSED [ 18%] 1825s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe9] PASSED [ 18%] 1825s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe10] PASSED [ 18%] 1825s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe11] PASSED [ 18%] 1825s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe12] PASSED [ 18%] 1825s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe13] PASSED [ 18%] 1825s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe14] PASSED [ 18%] 1826s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe15] PASSED [ 18%] 1826s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe16] PASSED [ 18%] 1826s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe17] PASSED [ 18%] 1826s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::TestBaseTimestepInterface::test_dt[universe18] PASSED [ 18%] 1826s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni0] PASSED [ 18%] 1826s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni1] PASSED [ 18%] 1826s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni2] PASSED [ 18%] 1826s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni3] PASSED [ 18%] 1826s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni4] PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni5] PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_timestep_api.py::test_atomgroup_dims_access[uni6] PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_pytng_not_present_raises PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_parse_n_atoms_no_pytng PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_n_atoms SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_n_frames SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_first_frame SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_double_close SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_dt SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_ts_dt_matches_reader SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_total_time SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_first_dimensions SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_changing_dimensions SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_volume SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_add_same_auxname_raises_ValueError SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_remove_auxiliary SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_remove_nonexistant_auxiliary_raises_ValueError SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_auxiliary SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_get_aux_attribute SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_as_aux_cutoff SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_reload_auxiliaries_from_description SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_stop_iter SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_iter SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_2iter SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_slice SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_switch_frame SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformation_rewind SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_copy SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_add_another_transformations_raises_ValueError SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_pickle_reader SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_frame_collect_all_same SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[fac] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[fca] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[afc] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[acf] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[caf] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_shape[cfa] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_values[slice0] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_values[slice1] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_values[slice2] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_asel_shape[index 1] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_asel_shape[index 2] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_asel_shape[index 1 to 3] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_empty_asel SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_empty_atomgroup SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_asel_warns_deprecation SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_atomgroup SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_timeseries_atomgroup_asel_mutex SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_last_frame SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_go_over_last_frame SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_frame_jump SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_frame_jump_issue1942 SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_next_gives_second_frame SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_reopen SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_rename_aux SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_as_aux_highf SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_as_aux_lowf SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_rewinds[indexed] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_rewinds[sliced] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_iter_rewinds[all] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_pickle_next_ts_reader SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_pickle_last_ts_reader SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_get_writer_1 SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_get_writer_2 SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_tng_traj_uneven_blocks SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_n_atoms SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_n_frames SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_block_names SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_special_blocks SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_additional_blocks SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_initial_frame_is_0 SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_starts_with_first_frame SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_rewind SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_full_slice SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_random_access SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_frame_overrun SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_positions_first_frame SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_box_first_frame SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_positions_last_frame SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_box_last_frame SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[0] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[20] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[50] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[100] SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_lambda_in_ts SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_read_box_fail_strange_step SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_read_pos_fail_strange_step SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_additional_block_read_fails SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_parse_n_atoms SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_n_atoms SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_n_frames SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_block_names SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_special_blocks SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_read_vels_fail_strange_step SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_read_force_fail_strange_step SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_writer_raises_notimpl SKIPPED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_initial_frame_is_0 PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_positions PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_dimensions PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_n_frames PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_n_atoms PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_frame PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_time PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_dt PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_data_step PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_periodic PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_rewind PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_random_access PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_read_frame_reopens PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_trc_n_atoms PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_periodic PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_trc_dimensions PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_open_twice PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBoxNoConvert::test_trc_dimensions PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_trc_n_atoms PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_periodic PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_trc_dimensions PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_trc_distances PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTruncOctBox::test_universe PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCGenboxOrigin::test_universe PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCGenboxEuler::test_universe PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCEmptyFile::test_universe PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_n_atoms PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_periodic PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_dimensions PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_n_frames PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_frame PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_time PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_load_prm PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_n_atoms PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_n_frames PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_periodic PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_amber_proteinselection PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_sum_centres_of_geometry PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_initial_frame_is_0 PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_starts_with_first_frame PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_rewind PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_full_slice PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_random_access PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_read_frame_reopens PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_load_prm PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_n_atoms PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_n_frames PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_periodic PASSED [ 18%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_amber_proteinselection PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_sum_centres_of_geometry PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_initial_frame_is_0 PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_starts_with_first_frame PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_rewind PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_full_slice PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_random_access PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_read_frame_reopens PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_load_prm PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_n_atoms PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_n_frames PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_periodic PASSED [ 19%] 1827s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_amber_proteinselection PASSED [ 19%] 1828s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_sum_centres_of_geometry PASSED [ 19%] 1828s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_initial_frame_is_0 PASSED [ 19%] 1828s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_starts_with_first_frame PASSED [ 19%] 1828s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_rewind PASSED [ 19%] 1828s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_full_slice PASSED [ 19%] 1828s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_random_access PASSED [ 19%] 1828s testsuite/MDAnalysisTests/coordinates/test_trj.py::test_trj_no_natoms PASSED [ 19%] 1828s testsuite/MDAnalysisTests/coordinates/test_trz.py::test_deprecated_trz_reader PASSED [ 19%] 1828s testsuite/MDAnalysisTests/coordinates/test_trz.py::test_deprecated_trz_writer PASSED [ 19%] 1828s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_load_trz PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_next_trz PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_rewind_trz PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_n_frames PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_seeking PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_volume PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_unitcell PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_coordinates PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_velocities PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_delta PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_time PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_title PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_get_writer PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_get_writer_2 PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_get_wrong_n_atoms PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_read_zero_box PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter::test_write_trajectory PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter::test_long_title PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter::test_no_box_warning PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter2::test_writer_trz_from_other PASSED [ 19%] 1829s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter2::test_no_dt_warning PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestWrite_Partial_Timestep::test_write_trajectory PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_txyz_positions PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arc_positions PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arc_positions_frame_2 PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arc_traj_length PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arcpbc_traj_length PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_pbc_boxsize PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_load_prm PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_n_atoms PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_n_frames PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_periodic PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_amber_proteinselection PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_sum_centres_of_geometry PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_initial_frame_is_0 PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_starts_with_first_frame PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_rewind PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_full_slice PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_random_access PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_read_frame_reopens PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_len PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_getting PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_slicing PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_slicing_2 PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_position PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_velocity PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_force PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_unitcell PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_n_atoms[ascii] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_n_atoms[bz2] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_n_atoms[gzip] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_length[ascii] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_length[bz2] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_length[gzip] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_seeking[ascii] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_seeking[bz2] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_seeking[gzip] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_boxsize[ascii] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_boxsize[bz2] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_boxsize[gzip] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_atom_reordering[ascii] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_atom_reordering[bz2] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_atom_reordering[gzip] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_true-fields0] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_single-fields1] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_multiple-fields2] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_wrong_format_additional_colums[u_additional_columns_wrong_format] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_warning[u_additional_columns_not_present] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_n_atoms PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_length PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_seeking PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_boxsize PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_atom_reordering PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_additional_columns[u_additional_columns_true-fields0] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_additional_columns[u_additional_columns_single-fields1] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_additional_columns[u_additional_columns_multiple-fields2] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_wrong_format_additional_colums[u_additional_columns_wrong_format] PASSED [ 19%] 1830s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_warning[u_additional_columns_not_present] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_n_frames PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_rewind PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_iteration PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_slice_iteration PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_len PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_getting PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_slicing PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_slicing_2 PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_position PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_velocity PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_force PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_unitcell PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_load_prm PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_n_atoms PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_n_frames PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_periodic PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_amber_proteinselection PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_sum_centres_of_geometry PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_initial_frame_is_0 PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_starts_with_first_frame PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_rewind PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_full_slice PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_random_access PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_read_frame_reopens PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinARC::test_n_frames PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinARC::test_positions PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinARC::test_positions_2 PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[CRDWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[ChemfilesWriter] SKIPPED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[DATAWriter] SKIPPED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[DCDWriter0] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[DCDWriter1] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[FHIAIMSWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[GROWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[H5MDWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[MOL2Writer] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[MultiPDBWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[NAMDBINWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[NCDFWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[NullWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[PDBQTWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[PDBWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[PQRWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[TRRWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[TRZWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[XTCWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[XYZWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[CRDWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[ChemfilesWriter] SKIPPED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[DATAWriter] SKIPPED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[DCDWriter0] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[DCDWriter1] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[FHIAIMSWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[GROWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[H5MDWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[MOL2Writer] SKIPPED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[MultiPDBWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[NAMDBINWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[NCDFWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[NullWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[PDBQTWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[PDBWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[PQRWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[TRRWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[TRZWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[XTCWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[XYZWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[CRDWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[ChemfilesWriter] SKIPPED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[DATAWriter] SKIPPED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[DCDWriter0] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[DCDWriter1] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[FHIAIMSWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[GROWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[H5MDWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[MOL2Writer] SKIPPED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[MultiPDBWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[NAMDBINWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[NCDFWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[NullWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[PDBQTWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[PDBWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[PQRWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[TRRWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[TRZWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[XTCWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[XYZWriter] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_default_multiframe PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_singleframe PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_multiframe_magic2 PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_singleframe_magic2 PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_offsets_filename[foo.xtc-kwargs0-.foo.xtc_offsets.npz] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_offsets_filename[foo.xtc-kwargs1-.foo.xtc_offsets.npz] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_offsets_filename[bar.0001.trr-kwargs2-.bar.0001.trr_offsets.npzzzz] PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_Sub::test_load_new_raises_ValueError PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_Sub::test_sub_coordinates PASSED [ 19%] 1831s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_Sub::test_load_new_raises_ValueError PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_Sub::test_sub_coordinates PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_rewind_xdrtrj PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_next_xdrtrj PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_jump_xdrtrj PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_jump_lastframe_xdrtrj PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_slice_xdrtrj PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_reverse_xdrtrj PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_coordinates PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_unitcell PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_volume PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_dt PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_totaltime PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_frame PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_time PASSED [ 20%] 1832s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_get_Writer PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_Writer PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_EOFraisesStopIteration PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_read_next_timestep_ts_no_positions PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReaderClass::test_with_statement PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_rewind_xdrtrj PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_next_xdrtrj PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_jump_xdrtrj PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_jump_lastframe_xdrtrj PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_slice_xdrtrj PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_reverse_xdrtrj PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_coordinates PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_unitcell PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_volume PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_dt PASSED [ 20%] 1833s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_totaltime PASSED [ 20%] 1834s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_frame PASSED [ 20%] 1834s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_time PASSED [ 20%] 1834s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_get_Writer PASSED [ 20%] 1834s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_Writer PASSED [ 20%] 1834s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_EOFraisesStopIteration PASSED [ 20%] 1834s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_read_next_timestep_ts_no_positions PASSED [ 20%] 1834s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_velocities PASSED [ 20%] 1835s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCNoConversion::test_coordinates PASSED [ 20%] 1835s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRNoConversion::test_coordinates PASSED [ 20%] 1836s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter::test_write_trajectory PASSED [ 20%] 1836s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter::test_timestep_not_modified_by_writer PASSED [ 20%] 1837s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_write_trajectory PASSED [ 20%] 1837s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_timestep_not_modified_by_writer PASSED [ 20%] 1838s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_velocities PASSED [ 20%] 1839s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_gaps PASSED [ 20%] 1840s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_data_preservation PASSED [ 20%] 1840s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterSingleFrame::test_single_frame_GRO PASSED [ 20%] 1842s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterSingleFrame::test_single_frame_PDB PASSED [ 20%] 1842s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterSingleFrame::test_single_frame_CRD PASSED [ 20%] 1842s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterSingleFrame::test_single_frame_GRO PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterSingleFrame::test_single_frame_PDB PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterSingleFrame::test_single_frame_CRD PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterIssue117::test_write_trajectory PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterIssue117::test_write_trajectory PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_triclinic_box PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_n_atoms PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_n_frames PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_first_frame PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_double_close PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_get_writer_1 PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_get_writer_2 PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_dt PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_ts_dt_matches_reader PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_total_time PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_first_dimensions PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_changing_dimensions PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_volume PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_add_same_auxname_raises_ValueError PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_remove_auxiliary PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_auxiliary PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_get_aux_attribute PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_as_aux_cutoff PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_reload_auxiliaries_from_description PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_stop_iter PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_iter PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_2iter PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_slice PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_switch_frame PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformation_rewind PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_copy PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_add_another_transformations_raises_ValueError PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_pickle_reader PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_frame_collect_all_same PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[fac] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[fca] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[afc] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[acf] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[caf] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_shape[cfa] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_values[slice0] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_values[slice1] SKIPPED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_values[slice2] SKIPPED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_asel_shape[index 1] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_asel_shape[index 2] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_asel_shape[index 1 to 3] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_empty_asel PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_empty_atomgroup PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_asel_warns_deprecation PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_atomgroup PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_timeseries_atomgroup_asel_mutex PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_last_frame PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_go_over_last_frame PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_frame_jump PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_frame_jump_issue1942 PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_next_gives_second_frame PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_reopen PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_rename_aux PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_as_aux_highf PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_as_aux_lowf PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_rewinds[indexed] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_rewinds[sliced] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_iter_rewinds[all] PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_pickle_next_ts_reader PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_pickle_last_ts_reader PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_different_box PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_trajectory_atomgroup PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_trajectory_universe PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_selection PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_none PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_no_container PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_not_changing_ts PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_different_precision PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_n_atoms PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_n_frames PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_first_frame PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_double_close PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_get_writer_1 PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_get_writer_2 PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_dt PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_ts_dt_matches_reader PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_total_time PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_first_dimensions PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_changing_dimensions PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_volume PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_add_same_auxname_raises_ValueError PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_remove_auxiliary PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_auxiliary PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_get_aux_attribute PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_as_aux_cutoff PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_reload_auxiliaries_from_description PASSED [ 20%] 1844s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_stop_iter PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_iter PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_2iter PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_slice PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_switch_frame PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformation_rewind PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_copy PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_add_another_transformations_raises_ValueError PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_pickle_reader PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_frame_collect_all_same PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[fac] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[fca] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[afc] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[acf] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[caf] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_shape[cfa] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_values[slice0] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_values[slice1] SKIPPED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_values[slice2] SKIPPED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_asel_shape[index 1] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_asel_shape[index 2] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_asel_shape[index 1 to 3] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_empty_asel PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_empty_atomgroup PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_asel_warns_deprecation PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_atomgroup PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_timeseries_atomgroup_asel_mutex PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_last_frame PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_go_over_last_frame PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_frame_jump PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_frame_jump_issue1942 PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_next_gives_second_frame PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_reopen PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_rename_aux PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_as_aux_highf PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_as_aux_lowf PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_rewinds[indexed] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_rewinds[sliced] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_iter_rewinds[all] PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_pickle_next_ts_reader PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_pickle_last_ts_reader PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_different_box PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_trajectory_atomgroup PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_trajectory_universe PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_selection PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_none PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_no_container PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_not_changing_ts PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_lambda PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_offsets PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_reload_offsets PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_nonexistent_offsets_file PASSED [ 20%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_corrupted_offsets_file PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_reload_offsets_if_offsets_readin_io_fails PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_reload_offsets_if_offsets_readin_value_fails PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_size_mismatch PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_ctime_mismatch PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_natoms_mismatch PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_last_frame_wrong PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_unsupported_format PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_readonly PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_offset_lock_created PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_offsets PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_reload_offsets PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_nonexistent_offsets_file PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_corrupted_offsets_file PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_reload_offsets_if_offsets_readin_io_fails PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_reload_offsets_if_offsets_readin_value_fails PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_size_mismatch PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_ctime_mismatch PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_natoms_mismatch PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_last_frame_wrong PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_unsupported_format PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_readonly PASSED [ 21%] 1845s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_offset_lock_created PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_pathlib PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_n_atoms PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_n_frames PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_first_frame PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_double_close PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_get_writer_1 PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_get_writer_2 PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_dt PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_ts_dt_matches_reader PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_total_time PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_first_dimensions PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_changing_dimensions PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_volume PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_add_same_auxname_raises_ValueError PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_remove_auxiliary PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_auxiliary PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_get_aux_attribute PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_as_aux_cutoff PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_reload_auxiliaries_from_description PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_stop_iter PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_iter PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_2iter PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_slice PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_switch_frame PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformation_rewind PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_copy PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_add_another_transformations_raises_ValueError PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_pickle_reader PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_frame_collect_all_same PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[fac] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[fca] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[afc] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[acf] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[caf] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_shape[cfa] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_values[slice0] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_values[slice1] SKIPPED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_values[slice2] SKIPPED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_asel_shape[index 1] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_asel_shape[index 2] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_empty_asel PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_empty_atomgroup PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_asel_warns_deprecation PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_atomgroup PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_timeseries_atomgroup_asel_mutex PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_last_frame PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_go_over_last_frame PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_frame_jump PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_frame_jump_issue1942 PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_next_gives_second_frame PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_reopen PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_rename_aux PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_as_aux_highf PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_as_aux_lowf PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_rewinds[indexed] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_rewinds[sliced] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_iter_rewinds[all] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_pickle_next_ts_reader PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_pickle_last_ts_reader PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_double_open PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_different_box PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_trajectory_atomgroup PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_trajectory_universe PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_none PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_no_container PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_not_changing_ts PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_selection PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_different_models_in_trajectory PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_no_conversion PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_remark[Curstom Remark-Curstom Remark] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_remark[-] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_remark[None-frame 0 | Written by MDAnalysis XYZWriter (release 2.8.0)] PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_n_atoms PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_n_frames PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_first_frame PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_double_close PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_get_writer_1 PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_get_writer_2 PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_dt PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_ts_dt_matches_reader PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_total_time PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_first_dimensions PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_changing_dimensions PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_volume PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_add_same_auxname_raises_ValueError PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_remove_auxiliary PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_auxiliary PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_get_aux_attribute PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_as_aux_cutoff PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_reload_auxiliaries_from_description PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_stop_iter PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_iter PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_2iter PASSED [ 21%] 1846s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_slice PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_switch_frame PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformation_rewind PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_copy PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_add_another_transformations_raises_ValueError PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_pickle_reader PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_frame_collect_all_same PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[fac] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[fca] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[afc] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[acf] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[caf] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_shape[cfa] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_values[slice0] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_values[slice1] SKIPPED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_values[slice2] SKIPPED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_asel_shape[index 1] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_asel_shape[index 2] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_asel_shape[index 1 to 3] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_empty_asel PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_empty_atomgroup PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_asel_warns_deprecation PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_atomgroup PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_timeseries_atomgroup_asel_mutex PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_last_frame PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_go_over_last_frame PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_frame_jump PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_frame_jump_issue1942 PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_next_gives_second_frame PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_reopen PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_rename_aux PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_as_aux_highf PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_as_aux_lowf PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_rewinds[indexed] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_rewinds[sliced] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_iter_rewinds[all] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_pickle_next_ts_reader PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_pickle_last_ts_reader PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_double_open PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_different_box PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_trajectory_atomgroup PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_trajectory_universe PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_none PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_no_container PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_not_changing_ts PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_selection PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_different_models_in_trajectory PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_no_conversion PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_remark[Curstom Remark-Curstom Remark] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_remark[-] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_remark[None-frame 0 | Written by MDAnalysis XYZWriter (release 2.8.0)] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_no_names PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_elements_or_names[elements] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_elements_or_names[names] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_elements_and_names PASSED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_case_insensitive SKIPPED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_lib_as_method SKIPPED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_kwargs SKIPPED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_lib_method_kwargs SKIPPED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accessors.py::TestAccessor::test_access_from_class PASSED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accessors.py::TestConverterWrapper::test_raises_valueerror PASSED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accessors.py::TestConverterWrapper::test_single_instance SKIPPED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute[atoms] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute[residues] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute[segments] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_different_func[atoms] PASSED [ 21%] 1847s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_different_func[residues] PASSED [ 21%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_different_func[segments] PASSED [ 21%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-resindices-residues] PASSED [ 21%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-segindices-segments] PASSED [ 21%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-molnums-molecules] PASSED [ 21%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-fragindices-fragments] PASSED [ 21%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-resindices-residues] PASSED [ 21%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-segindices-segments] PASSED [ 21%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-molnums-molecules] PASSED [ 21%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-fragindices-fragments] PASSED [ 21%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-resindices-residues] PASSED [ 22%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-segindices-segments] PASSED [ 22%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-molnums-molecules] PASSED [ 22%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-fragindices-fragments] PASSED [ 22%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongname[atoms] PASSED [ 22%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongname[residues] PASSED [ 22%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongname[segments] PASSED [ 22%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongcomponent[atoms] PASSED [ 22%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongcomponent[residues] PASSED [ 22%] 1848s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongcomponent[segments] PASSED [ 22%] 1849s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nobonds[atoms] PASSED [ 22%] 1849s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nobonds[residues] PASSED [ 22%] 1850s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nobonds[segments] PASSED [ 22%] 1850s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nomolnums[atoms] PASSED [ 22%] 1851s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nomolnums[residues] PASSED [ 22%] 1851s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nomolnums[segments] PASSED [ 22%] 1851s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute[atoms] PASSED [ 22%] 1851s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute[residues] PASSED [ 22%] 1851s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute[segments] PASSED [ 22%] 1851s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_wrongshape[atoms] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_wrongshape[residues] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_wrongshape[segments] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-resindices-residues] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-segindices-segments] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-molnums-molecules] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-fragindices-fragments] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-resindices-residues] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-segindices-segments] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-molnums-molecules] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-fragindices-fragments] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-resindices-residues] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-segindices-segments] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-molnums-molecules] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-fragindices-fragments] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge[atoms] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge[residues] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge[segments] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[atoms-resids-residues] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[atoms-segids-segments] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[atoms-fragindices-fragments] PASSED [ 22%] 1852s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[residues-resids-residues] PASSED [ 22%] 1853s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[residues-segids-segments] PASSED [ 22%] 1853s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[residues-fragindices-fragments] PASSED [ 22%] 1853s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[segments-resids-residues] PASSED [ 22%] 1853s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[segments-segids-segments] PASSED [ 22%] 1853s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[segments-fragindices-fragments] PASSED [ 22%] 1853s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_duplicates[atoms] PASSED [ 22%] 1853s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_duplicates[residues] PASSED [ 22%] 1853s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_duplicates[segments] PASSED [ 22%] 1853s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass[atoms] PASSED [ 22%] 1854s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass[residues] PASSED [ 22%] 1854s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass[segments] PASSED [ 22%] 1854s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[atoms-resids-residues] PASSED [ 22%] 1854s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[atoms-segids-segments] PASSED [ 22%] 1854s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[atoms-fragindices-fragments] PASSED [ 22%] 1854s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[residues-resids-residues] PASSED [ 22%] 1854s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[residues-segids-segments] PASSED [ 22%] 1854s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[residues-fragindices-fragments] PASSED [ 22%] 1854s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[segments-resids-residues] PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[segments-segids-segments] PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[segments-fragindices-fragments] PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_duplicates[atoms] PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_duplicates[residues] PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_duplicates[segments] PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_com PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_no_center PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_residues_com_coc PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_segment PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_fragments PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_com PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_coc PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_no_center PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_residues PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_segment PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_fragments PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_attributes_names PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attribute_name PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attribute_type PASSED [ 22%] 1855s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attribute_mass PASSED [ 22%] 1856s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attributes_charge PASSED [ 22%] 1856s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_attributes_positions PASSED [ 22%] 1856s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_atom_selection PASSED [ 22%] 1856s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_hierarchy PASSED [ 22%] 1856s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_bad_add PASSED [ 22%] 1856s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_add_AG PASSED [ 22%] 1856s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_no_velo PASSED [ 22%] 1856s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_bonded_atoms PASSED [ 22%] 1856s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_undefined_occupancy PASSED [ 22%] 1857s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_atom_pickle[1] PASSED [ 22%] 1857s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_atom_pickle[-1] PASSED [ 22%] 1857s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_improper_initialisation PASSED [ 22%] 1857s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_velocity_fail PASSED [ 22%] 1857s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_force_fail PASSED [ 22%] 1857s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_velocity_set_fail PASSED [ 22%] 1857s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_force_set_fail PASSED [ 22%] 1857s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_bond PASSED [ 22%] 1857s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_angle PASSED [ 22%] 1857s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_dihedral PASSED [ 22%] 1858s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_improper PASSED [ 22%] 1858s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[bond] PASSED [ 22%] 1858s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[angle] PASSED [ 22%] 1858s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[dihedral] PASSED [ 22%] 1858s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[improper] PASSED [ 22%] 1858s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_no_args PASSED [ 22%] 1859s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_raises_unknown_format PASSED [ 22%] 1859s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_coordinates PASSED [ 22%] 1859s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames[frames0] PASSED [ 22%] 1859s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames[frames1] PASSED [ 22%] 1859s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames[frames2] PASSED [ 22%] 1859s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_iterator[frames0] PASSED [ 22%] 1859s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_iterator[frames1] PASSED [ 22%] 1859s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_iterator[frames2] PASSED [ 22%] 1859s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-xtc] PASSED [ 22%] 1860s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-dcd] PASSED [ 22%] 1861s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-pdb] PASSED [ 22%] 1861s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-xyz] PASSED [ 22%] 1862s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-PDB] PASSED [ 22%] 1862s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-xtc] PASSED [ 22%] 1862s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-dcd] PASSED [ 22%] 1862s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-pdb] PASSED [ 22%] 1863s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-xyz] PASSED [ 22%] 1863s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-PDB] PASSED [ 22%] 1864s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-xtc] PASSED [ 22%] 1864s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-dcd] PASSED [ 22%] 1864s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-pdb] PASSED [ 22%] 1865s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-xyz] PASSED [ 22%] 1865s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-PDB] PASSED [ 22%] 1866s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_all[] PASSED [ 22%] 1866s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_all[.gz] PASSED [ 22%] 1866s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_all[.bz2] PASSED [ 22%] 1866s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[invalid] PASSED [ 22%] 1866s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[8] PASSED [ 22%] 1866s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[True] PASSED [ 22%] 1866s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[False] PASSED [ 22%] 1866s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[3.2] PASSED [ 22%] 1867s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_incompatible_arguments PASSED [ 22%] 1867s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_incompatible_trajectories PASSED [ 22%] 1867s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_no_traj_move PASSED [ 22%] 1867s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_selection PASSED [ 22%] 1867s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_bogus_kwarg_pdb PASSED [ 22%] 1868s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_atoms[] PASSED [ 22%] 1868s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_atoms[.gz] PASSED [ 22%] 1869s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_atoms[.bz2] PASSED [ 22%] 1869s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_empty_atomgroup PASSED [ 22%] 1869s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_selection[name CA] PASSED [ 22%] 1869s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_selection[segid 4AKE and resname LEU] PASSED [ 22%] 1870s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_selection[segid 4AKE] PASSED [ 22%] 1870s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_Residue PASSED [ 22%] 1871s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_Universe PASSED [ 22%] 1871s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_atoms[] PASSED [ 22%] 1871s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_atoms[.gz] PASSED [ 22%] 1871s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_atoms[.bz2] PASSED [ 22%] 1871s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_empty_atomgroup PASSED [ 22%] 1872s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_selection[name CA] PASSED [ 22%] 1872s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_selection[segid 4AKE and resname LEU] PASSED [ 22%] 1872s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_selection[segid 4AKE] PASSED [ 22%] 1872s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_Residue PASSED [ 22%] 1872s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_Universe PASSED [ 22%] 1872s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_translate PASSED [ 22%] 1872s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_rotate PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_rotateby PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_transform_rotation_only PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_transform_translation_only PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_transform_translation_and_rotation PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_1 PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_2 PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_duplicates PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_wrong_length PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_wrong_shape PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-fragments-atoms] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-fragments-residues] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-fragments-segments] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-molecules-atoms] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-molecules-residues] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-molecules-segments] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-residues-atoms] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-residues-residues] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-residues-segments] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-group-atoms] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-group-residues] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-group-segments] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-segments-atoms] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-segments-residues] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-segments-segments] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-fragments-atoms] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-fragments-residues] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-fragments-segments] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-molecules-atoms] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-molecules-residues] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-molecules-segments] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-residues-atoms] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-residues-residues] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-residues-segments] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-group-atoms] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-group-residues] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-group-segments] PASSED [ 22%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-segments-atoms] PASSED [ 23%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-segments-residues] PASSED [ 23%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-segments-segments] PASSED [ 23%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap_wrap_true_group PASSED [ 23%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_atoms PASSED [ 23%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_residues PASSED [ 23%] 1873s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_segments PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_VE PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[name-names-string] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[type-types-string] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[altLoc-altLocs-string] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[charge-charges-float] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[mass-masses-float] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[radius-radii-float] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[bfactor-bfactors-float] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[occupancy-occupancies-float] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[name-names-string] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[type-types-string] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[altLoc-altLocs-string] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[charge-charges-float] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[mass-masses-float] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[radius-radii-float] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[bfactor-bfactors-float] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[occupancy-occupancies-float] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_unique_restore_mask PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestOrphans::test_atom PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestOrphans::test_atomgroup PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[0-0] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[0-1] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[1-0] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[1-1] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_adding_empty_ags PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection_name[kwargs0-names0] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection_name[kwargs1-names1] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection_name[kwargs2-names2] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_single PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_empty PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_name[kwargs0-names0] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_name[kwargs1-names1] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_name[kwargs2-names2] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection_name[kwargs0-names0] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection_name[kwargs1-names1] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection_name[kwargs2-names2] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_single PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_empty PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_name[kwargs0-names0] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_name[kwargs1-names1] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_name[kwargs2-names2] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection_name[kwargs0-names0] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection_name[kwargs1-names1] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection_name[kwargs2-names2] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_empty PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_single PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_name[kwargs0-names0] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_name[kwargs1-names1] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_name[kwargs2-names2] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs0-names0] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs1-names1] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs2-names2] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs3-names3] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_single PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_empty PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[CYS] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[ILE] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[SER] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[THR] PASSED [ 23%] 1874s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[VAL] PASSED [ 23%] 1875s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[CYSH] PASSED [ 23%] 1876s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[ILE] PASSED [ 23%] 1876s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[SER] PASSED [ 23%] 1876s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[THR] PASSED [ 23%] 1877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[VAL] PASSED [ 23%] 1877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[CYS] PASSED [ 23%] 1877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[ILE] PASSED [ 23%] 1877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[SER] PASSED [ 23%] 1877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[THR] PASSED [ 23%] 1877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[VAL] PASSED [ 23%] 1877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[ARG] PASSED [ 23%] 1878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[ASP] PASSED [ 23%] 1878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[CYS] PASSED [ 23%] 1879s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[GLN] PASSED [ 23%] 1879s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[GLU] PASSED [ 23%] 1880s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[HIS] PASSED [ 23%] 1880s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[ILE] PASSED [ 23%] 1881s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[LEU] PASSED [ 23%] 1881s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[LYS] PASSED [ 23%] 1882s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[MET] PASSED [ 23%] 1882s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[PHE] PASSED [ 23%] 1883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[PRO] PASSED [ 23%] 1883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[SER] PASSED [ 23%] 1884s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[THR] PASSED [ 23%] 1884s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[TRP] PASSED [ 23%] 1885s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[TYR] PASSED [ 23%] 1885s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[VAL] PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_no_chi1[ALA] PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_no_chi1[GLY] PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_sel_fail PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_sels_fail PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_sel_fail PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_sels_fail PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_sel_fail PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_sels_fail PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_ch1_sel_fail PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_sels_fail PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_phi PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_psi PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_omega PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_chi1 PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_nodep PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_nodep PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_nodep PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_nodep PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_geometry-True-ref0] PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_geometry-False-ref1] PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_mass-True-ref0] PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_mass-False-ref1] PASSED [ 23%] 1886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-moment_of_inertia-True-ref0] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-moment_of_inertia-False-ref1] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-asphericity-True-ref0] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-asphericity-False-ref1] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-shape_parameter-True-ref0] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-shape_parameter-False-ref1] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_geometry-True-ref0] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_geometry-False-ref1] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_mass-True-ref0] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_mass-False-ref1] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-moment_of_inertia-True-ref0] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-moment_of_inertia-False-ref1] PASSED [ 23%] 1887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-asphericity-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-asphericity-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-shape_parameter-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-shape_parameter-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_geometry-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_geometry-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_mass-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_mass-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[moment_of_inertia-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[moment_of_inertia-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[asphericity-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[asphericity-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_geometry-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_geometry-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_mass-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_mass-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[radius_of_gyration-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[radius_of_gyration-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[shape_parameter-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[shape_parameter-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[asphericity-True-ref0] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[asphericity-False-ref1] PASSED [ 23%] 1888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[moment_of_inertia-True-ref0] PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[moment_of_inertia-False-ref1] PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bbox-True-ref0] PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bbox-False-ref1] PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bsphere-True-ref0] PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bsphere-False-ref1] PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[principal_axes-True-ref0] PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[principal_axes-False-ref1] PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_int PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_slice PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_slice2 PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_IE PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bad_make PASSED [ 23%] 1889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_invalid_index_initialisation PASSED [ 23%] 1890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_n_atoms PASSED [ 23%] 1890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_n_residues PASSED [ 23%] 1890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_zero_atoms_residues PASSED [ 23%] 1890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_n_segments PASSED [ 23%] 1890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_zero_atoms_segments PASSED [ 23%] 1890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resids_dim PASSED [ 23%] 1890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnums_dim PASSED [ 23%] 1890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_segids_dim PASSED [ 23%] 1890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_len PASSED [ 23%] 1890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_of_geometry PASSED [ 23%] 1891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_of_mass PASSED [ 23%] 1891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_duplicates[center_of_geometry] PASSED [ 23%] 1891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_duplicates[center_of_mass] PASSED [ 23%] 1891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[resids-residues-center_of_geometry] PASSED [ 23%] 1891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[resids-residues-center_of_mass] PASSED [ 23%] 1891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[segids-segments-center_of_geometry] PASSED [ 23%] 1891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[segids-segments-center_of_mass] PASSED [ 23%] 1891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-resids-residues-center_of_geometry] PASSED [ 23%] 1892s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-resids-residues-center_of_mass] PASSED [ 23%] 1892s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-segids-segments-center_of_geometry] PASSED [ 23%] 1893s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-segids-segments-center_of_mass] PASSED [ 23%] 1893s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-resids-residues-center_of_geometry] PASSED [ 23%] 1893s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-resids-residues-center_of_mass] PASSED [ 23%] 1893s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-segids-segments-center_of_geometry] PASSED [ 23%] 1893s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-segids-segments-center_of_mass] PASSED [ 23%] 1893s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[molnums-molecules-center_of_geometry] PASSED [ 24%] 1894s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[molnums-molecules-center_of_mass] PASSED [ 24%] 1895s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[fragindices-fragments-center_of_geometry] PASSED [ 24%] 1896s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[fragindices-fragments-center_of_mass] PASSED [ 24%] 1898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-molnums-molecules-center_of_geometry] PASSED [ 24%] 1899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-molnums-molecules-center_of_mass] PASSED [ 24%] 1901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-fragindices-fragments-center_of_geometry] PASSED [ 24%] 1903s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-fragindices-fragments-center_of_mass] PASSED [ 24%] 1903s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-molnums-molecules-center_of_geometry] PASSED [ 24%] 1904s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-molnums-molecules-center_of_mass] PASSED [ 24%] 1905s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-fragindices-fragments-center_of_geometry] PASSED [ 24%] 1906s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-fragindices-fragments-center_of_mass] PASSED [ 24%] 1907s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_wrong_compound PASSED [ 24%] 1907s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_fail[molecules] PASSED [ 24%] 1908s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_fail[fragments] PASSED [ 24%] 1908s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-group-None] PASSED [ 24%] 1908s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-group-weights1] PASSED [ 24%] 1908s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-group-weights2] PASSED [ 24%] 1908s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-residues-None] PASSED [ 24%] 1908s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-residues-weights1] PASSED [ 24%] 1908s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-residues-weights2] PASSED [ 24%] 1909s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-segments-None] PASSED [ 24%] 1909s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-segments-weights1] PASSED [ 24%] 1909s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-segments-weights2] PASSED [ 24%] 1909s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-molecules-None] PASSED [ 24%] 1909s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-molecules-weights1] PASSED [ 24%] 1909s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-molecules-weights2] PASSED [ 24%] 1910s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-fragments-None] PASSED [ 24%] 1910s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-fragments-weights1] PASSED [ 24%] 1910s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-fragments-weights2] PASSED [ 24%] 1910s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-group-None] PASSED [ 24%] 1911s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-group-weights1] PASSED [ 24%] 1911s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-group-weights2] PASSED [ 24%] 1911s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-residues-None] PASSED [ 24%] 1911s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-residues-weights1] PASSED [ 24%] 1911s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-residues-weights2] PASSED [ 24%] 1911s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-segments-None] PASSED [ 24%] 1911s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-segments-weights1] PASSED [ 24%] 1912s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-segments-weights2] PASSED [ 24%] 1912s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-molecules-None] PASSED [ 24%] 1912s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-molecules-weights1] PASSED [ 24%] 1912s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-molecules-weights2] PASSED [ 24%] 1912s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-fragments-None] PASSED [ 24%] 1913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-fragments-weights1] PASSED [ 24%] 1914s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-fragments-weights2] PASSED [ 24%] 1914s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-None-False] PASSED [ 24%] 1914s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-None-True] PASSED [ 24%] 1914s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-weights1-False] PASSED [ 24%] 1914s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-weights1-True] PASSED [ 24%] 1914s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-None-False] PASSED [ 24%] 1915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-None-True] PASSED [ 24%] 1915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-weights1-False] PASSED [ 24%] 1915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-weights1-True] PASSED [ 24%] 1915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-None-False] PASSED [ 24%] 1915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-None-True] PASSED [ 24%] 1915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-weights1-False] PASSED [ 24%] 1915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-weights1-True] PASSED [ 24%] 1916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-None-False] PASSED [ 24%] 1916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-None-True] PASSED [ 24%] 1916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-weights1-False] PASSED [ 24%] 1916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-weights1-True] PASSED [ 24%] 1916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-None-False] PASSED [ 24%] 1917s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-None-True] PASSED [ 24%] 1918s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-weights1-False] PASSED [ 24%] 1918s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-weights1-True] PASSED [ 24%] 1918s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[-group-False] PASSED [ 24%] 1918s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[-group-True] PASSED [ 24%] 1919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[resids-residues-False] PASSED [ 24%] 1919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[resids-residues-True] PASSED [ 24%] 1919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[segids-segments-False] PASSED [ 24%] 1919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[segids-segments-True] PASSED [ 24%] 1920s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[molnums-molecules-False] PASSED [ 24%] 1920s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[molnums-molecules-True] PASSED [ 24%] 1921s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[fragindices-fragments-False] PASSED [ 24%] 1922s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[fragindices-fragments-True] PASSED [ 24%] 1922s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_coordinates PASSED [ 24%] 1922s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_principal_axes PASSED [ 24%] 1922s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_principal_axes_duplicates PASSED [ 24%] 1922s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_moment_of_inertia_duplicates PASSED [ 24%] 1922s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_radius_of_gyration_duplicates PASSED [ 24%] 1922s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_indices_ndarray PASSED [ 24%] 1922s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_indices PASSED [ 24%] 1922s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resids_ndarray PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resids PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnums_ndarray PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnums PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnames_ndarray PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnames PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_names_ndarray PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_names PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_segids_ndarray PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_segids PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_masses_ndarray PASSED [ 24%] 1923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_masses PASSED [ 24%] 1924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_charges_ndarray PASSED [ 24%] 1924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_charges PASSED [ 24%] 1924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bad_add_AG PASSED [ 24%] 1924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bool_false PASSED [ 24%] 1924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bool_true PASSED [ 24%] 1924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_repr PASSED [ 24%] 1924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_set_resnum_single PASSED [ 24%] 1924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_set_resname_single PASSED [ 24%] 1924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_packintobox_badshape PASSED [ 24%] 1924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_packintobox_noshape PASSED [ 24%] 1925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_packintobox PASSED [ 24%] 1925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_residues PASSED [ 24%] 1925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_integer PASSED [ 24%] 1925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_slice PASSED [ 24%] 1925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_slice_empty PASSED [ 24%] 1925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_advancedslice PASSED [ 24%] 1925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_2d_indexing_caught PASSED [ 24%] 1925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_boolean_indexing_2[sel0] PASSED [ 24%] 1925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_boolean_indexing_2[sel1] PASSED [ 24%] 1926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bool_IE PASSED [ 24%] 1926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_dihedral_ValueError PASSED [ 24%] 1926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_improper PASSED [ 24%] 1926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_dihedral_equals_improper PASSED [ 24%] 1926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bond PASSED [ 24%] 1926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bond_pbc PASSED [ 24%] 1926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bond_ValueError PASSED [ 24%] 1926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_angle PASSED [ 24%] 1926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_angle_ValueError PASSED [ 24%] 1926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_shape_parameter PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_shape_parameter_duplicates PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_asphericity PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_asphericity_duplicates PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_positions PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_set_names PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_atom_order PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTimestep::test_partial_timestep PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[ix] PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[ids] PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[resids] PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[segids] PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[charges] PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[masses] PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[tempfactors] PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_bonds PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_positions_2D PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_position_no_keyfunc PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_position PASSED [ 24%] 1927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupPickle::test_atomgroup_pickle[name CA] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupPickle::test_atomgroup_pickle[segid 4AKE] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_segid PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ACE] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ALA] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ALAD] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ARG] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ARGN] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASF] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASH] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASN] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASN1] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASP] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASPH] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CALA] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CARG] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CASF] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CASN] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CASP] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CCYS] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CCYX] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CGLN] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CGLU] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CGLY] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CHID] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CHIE] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CHIP] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CILE] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CLEU] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CLYS] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CME] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CMET] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CPHE] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CPRO] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CSER] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CTHR] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CTRP] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CTYR] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CVAL] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYM] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYS] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYS1] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYS2] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYSH] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYX] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[DAB] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLH] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLN] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLU] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLUH] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLY] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HID] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIE] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIP] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIS] PASSED [ 24%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIS1] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIS2] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISA] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISB] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISD] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISE] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISH] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HSD] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HSE] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HSP] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HYP] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ILE] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LEU] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LYN] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LYS] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LYSH] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[MET] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[MSE] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NALA] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NARG] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NASN] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NASP] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NCYS] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NCYX] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NGLN] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NGLU] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NGLY] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NHID] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NHIE] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NHIP] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NILE] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NLEU] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NLYS] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NME] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NMET] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NPHE] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NPRO] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NSER] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NTHR] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NTRP] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NTYR] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NVAL] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ORN] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[PGLU] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[PHE] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[PRO] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[QLN] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[SER] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[THR] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[TRP] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[TYR] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[VAL] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_backbone PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resid_single PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resid_range PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_selgroup PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_fullselgroup PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resnum_single PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resnum_range PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resname PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_name PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_atom PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_atom_empty PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_type PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_and PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_or PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_not PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_around[around 4.0 bynum 1943] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_around[around 4.0 index 1942] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphlayer[sphlayer 4.0 6.0 bynum 1281] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphlayer[sphlayer 4.0 6.0 index 1280] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_isolayer[isolayer 4.0 6.0 bynum 1281] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_isolayer[isolayer 4.0 6.0 index 1280] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphzone[sphzone 6.0 bynum 1281] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphzone[sphzone 6.0 index 1280] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cylayer[cylayer 4.0 6.0 10 -10 bynum 1281] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cylayer[cylayer 4.0 6.0 10 -10 index 1280] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_cylayer PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cyzone[cyzone 6.0 10 -10 bynum 1281] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cyzone[cyzone 6.0 10 -10 index 1280] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_cyzone PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_point PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_prop PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_bynum PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_index PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_byres[byres bynum 0:5-19] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_byres[byres index 0:19-43] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_same_resname PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_same_segment PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_same PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_selection PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_parenthesized_expression PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_no_space_around_parentheses PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_concatenated_selection PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_global PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname TYR THR-resname T*R] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname ASN GLN-resname *N] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname ASN ASP-resname AS*] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname TYR THR-resname T?R] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname ASN ASP HSD-resname *S?] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname LEU LYS-resname L**] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname MET-resname *M*] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname GLN GLY-resname GL[NY]] PASSED [ 25%] 1928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname GLU-resname GL[!NY]] PASSED [ 25%] 1929s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsAMBER::test_protein PASSED [ 25%] 1929s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsAMBER::test_backbone PASSED [ 25%] 1929s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsAMBER::test_type PASSED [ 25%] 1929s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNAMD::test_protein PASSED [ 25%] 1929s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNAMD::test_resid_single PASSED [ 25%] 1929s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNAMD::test_type PASSED [ 25%] 1929s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_protein PASSED [ 25%] 1930s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_backbone PASSED [ 25%] 1930s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_resid_single PASSED [ 25%] 1931s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as bynum 1 or bynum 10] PASSED [ 25%] 1931s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as bynum 1 10] PASSED [ 25%] 1932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as index 0 or index 9] PASSED [ 25%] 1932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as index 0 9] PASSED [ 25%] 1933s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cylayer[cylayer 10 20 20 -20 bynum 3554] PASSED [ 25%] 1933s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cylayer[cylayer 10 20 20 -20 index 3553] PASSED [ 25%] 1934s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cyzone[cyzone 20 20 -20 bynum 3554] PASSED [ 25%] 1934s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cyzone[cyzone 20 20 -20 index 3553] PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_same_fragment[same fragment as bynum 1] PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_same_fragment[same fragment as index 0] PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_moltype PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_molnum[molnum 1-reference0] PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_molnum[molnum 2:4-reference1] PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[aromatic-5] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[not aromatic-1] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[type N and aromatic-1] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[type C and aromatic-4] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts n-indices0] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [#7]-indices1] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts a-indices2] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts c-indices3] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [*-]-indices4] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [$([!#1]);$([!R][R])]-indices5] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [$([C@H](-[CH2])(-[O-])-C=O)]-indices6] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [$([C@@H](-[CH2])(-[O-])-C=O)]-indices7] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts a and type C-indices8] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[(smarts a) and (type C)-indices9] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts a and type N-indices10] SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_invalid_smarts_sel_raises_error SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_passing_rdkit_kwargs_to_converter SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_passing_max_matches_to_converter SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_passing_use_chirality_to_converter SKIPPED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleic PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleic_all PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleicbackbone PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleicbase PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleicsugar PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_around[True] PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_around[False] PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_layer[True] PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_layer[False] PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_isolayer[True] PASSED [ 25%] 1936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_isolayer[False] PASSED [ 25%] 1937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_zone[True] PASSED [ 25%] 1937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_zone[False] PASSED [ 25%] 1937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_point[True] PASSED [ 25%] 1937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_point[False] PASSED [ 25%] 1937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_cyzone[distmat-True] PASSED [ 25%] 1937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_cyzone[distmat-False] PASSED [ 25%] 1937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_sphzone[True-33] PASSED [ 25%] 1937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_sphzone[False-25] PASSED [ 25%] 1938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_around[True] PASSED [ 25%] 1938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_around[False] PASSED [ 25%] 1939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_layer[True] PASSED [ 25%] 1939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_layer[False] PASSED [ 25%] 1940s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_isolayer[True] PASSED [ 25%] 1940s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_isolayer[False] PASSED [ 25%] 1940s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_zone[True] PASSED [ 25%] 1941s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_zone[False] PASSED [ 25%] 1941s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_point[True] PASSED [ 25%] 1942s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_point[False] PASSED [ 25%] 1943s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_around PASSED [ 25%] 1943s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_sphlayer PASSED [ 25%] 1943s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_empty_sphlayer PASSED [ 25%] 1944s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_empty_isolayer PASSED [ 25%] 1944s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_sphzone PASSED [ 25%] 1945s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_empty_sphzone PASSED [ 25%] 1945s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_point_1 PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_point_2 PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass < 1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass <1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass< 1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass<1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge < 1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge <1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge< 1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge<1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass < 1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass <1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass< 1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass<1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge < 1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge <1.5] PASSED [ 25%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge< 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge<1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass <= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass <=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass<= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass<=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge <= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge <=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge<= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge<=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass <= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass <=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass<= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass<=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge <= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge <=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge<= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge<=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass > 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass >1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass> 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass>1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge > 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge >1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge> 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge>1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass > 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass >1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass> 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass>1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge > 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge >1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge> 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge>1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass >= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass >=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass>= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass>=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge >= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge >=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge>= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge>=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass >= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass >=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass>= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass>=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge >= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge >=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge>= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge>=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass == 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass ==1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass== 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass==1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge == 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge ==1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge== 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge==1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass == 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass ==1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass== 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass==1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge == 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge ==1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge== 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge==1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass != 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass !=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass!= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass!=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge != 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge !=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge!= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge!=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass != 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass !=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass!= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass!=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge != 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge !=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge!= 1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge!=1.5] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-<] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass->] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-<=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass->=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-==] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-!=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-<] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge->] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-<=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge->=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-==] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-!=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-<] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass->] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-<=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass->=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-==] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-!=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-<] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge->] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-<=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge->=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-==] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-!=] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestBondedSelection::test_bonded_1 PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestBondedSelection::test_nobonds_warns PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[name and H] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[name )] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resid abcd] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resnum 7a7] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resid 1-] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop chicken == tasty] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop chicken <= 7.4] PASSED [ 26%] 1946s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop mass ^^ 12.0] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[same this as resid 1] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[same resid resname mass 5.0] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[name H and] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[naem H] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resid and name C] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resnum ] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[bynum or protein] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[index or protein] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop mass < 4.0 hello] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop mass > 10. and group this] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass 1.0 to] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass to 3.0] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass 1.0:] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass :3.0] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass 1-] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[chirality ] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[formalcharge 0.2] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_invalid_prop_selection PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_segid_and_resid PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[name NameABA or name NameACA or name NameADA-name NameABA NameACA NameADA] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[type TypeE or type TypeD or type TypeB-type TypeE TypeD TypeB] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[resname RsC or resname RsY-resname RsC RsY] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[name NameAB* or name NameACC-name NameAB* NameACC] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[segid SegA or segid SegC-segid SegA SegC] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[(name NameABC or name NameABB) and (resname RsD or resname RsF)-name NameABC NameABB and resname RsD RsF] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-resid] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-resnum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-bynum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-index] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-resid] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-resnum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-bynum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-index] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-resid] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-resnum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-bynum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-index] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-resid] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-resnum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-bynum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-index] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-resid] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-resnum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-bynum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-index] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-resid] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-resnum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-bynum] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-index] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_resid_implicit_icode PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_1 PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_2 PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_3 PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_4 PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_5 PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_missing_icodes_VE PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_missing_icodes_range_VE PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_similarity_selection_icodes[same residue as -11] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_similarity_selection_icodes[same resid as-72] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_similarity_selection_icodes[byres-11] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[all] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[protein] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[backbone] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[nucleic] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[nucleicbackbone] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[name O] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[name N*] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resname stuff] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resname ALA] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[type O] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[index 0] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[index 1] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[bynum 1-10] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[segid SYSTEM] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resid 163] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resid 1-10] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resnum 2] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[around 10 resid 1] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[point 0 0 0 10] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[sphzone 10 resid 1] PASSED [ 26%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[sphlayer 0 10 index 1] PASSED [ 27%] 1947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[cyzone 15 4 -8 index 0] PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[cylayer 5 10 10 -8 index 1] PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[prop abs z <= 100] PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[byres index 0] PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[same resid as index 0] PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_empty_yet_global PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_arbitrary_atom_group_raises_error PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_empty_sel PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_record_type_sel PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_element_sel PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chain_sel PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.8 to 1.2-23844-selkwargs0] PASSED [ 27%] 1948s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 8e-1 to 1200e-3-23844-selkwargs1] PASSED [ 27%] 1949s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5--3-2-selkwargs2] PASSED [ 27%] 1949s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -3 : -5-0-selkwargs3] PASSED [ 27%] 1949s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5 --3-2-selkwargs4] PASSED [ 27%] 1950s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5- -3-2-selkwargs5] PASSED [ 27%] 1950s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5 - -3-2-selkwargs6] PASSED [ 27%] 1950s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10:3-34945-selkwargs7] PASSED [ 27%] 1951s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10 :3-34945-selkwargs8] PASSED [ 27%] 1952s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10: 3-34945-selkwargs9] PASSED [ 27%] 1952s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10 : 3-34945-selkwargs10] PASSED [ 27%] 1952s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10 -3-0-selkwargs11] PASSED [ 27%] 1953s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3-5-selkwargs12] PASSED [ 27%] 1953s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3-5-selkwargs13] PASSED [ 27%] 1953s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3 - 0.30000000000000004-10-selkwargs14] PASSED [ 27%] 1954s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.30000000000000004-5-selkwargs15] PASSED [ 27%] 1954s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3 0.30000000000000001-5-selkwargs16] PASSED [ 27%] 1954s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3-10-selkwargs17] PASSED [ 27%] 1955s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.30000000000000004-10-selkwargs18] PASSED [ 27%] 1955s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3 0.30000000000000001-10-selkwargs19] PASSED [ 27%] 1955s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[prop mass == 0.3-10-selkwargs20] PASSED [ 27%] 1956s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[prop mass == 0.30000000000000004-10-selkwargs21] PASSED [ 27%] 1956s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[prop mass == 0.30000000000000004-5-selkwargs22] PASSED [ 27%] 1957s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel_warning PASSED [ 27%] 1957s testsuite/MDAnalysisTests/core/test_atomselections.py::test_int_sel[resnum -10 to 3-13] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_int_sel[resnum -5--3-3] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_int_sel[resnum -3 : -5-0] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_negative_resid PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[aromaticity-5] SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[aromaticity true-5] SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[not aromaticity-15] SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[aromaticity False-15] SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel_error SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_error_selection_for_strange_dtype PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_default_selection_on_ordered_unique_group[name N-ix0] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_default_selection_on_ordered_unique_group[resname GLU-ix1] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[name N-True-ix0] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[name N-False-ix1] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[resname GLU-True-ix2] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[resname GLU-False-ix3] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[name N-True-ix0] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[name N-False-ix1] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[resname GLU-True-ix2] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[resname GLU-False-ix3] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality[C[C@@H](C(=O)O)N-S] SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality[C[C@H](C(=O)O)N-R] SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[R-1] SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[S-1] SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[R S-2] SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[S R-2] SKIPPED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[1-1-NH2] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[-1-1-OD2] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[0-34-N] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[-1 1-2-OD2] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_size PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_size_independent PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[_AR] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[RA] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[_RS] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[SR] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[_AR] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[RA] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[_RS] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[SR] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_move_atom PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_move_residue PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA0] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA1] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA2] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA3] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA4] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA5] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA6] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA7] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA8] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA9] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA10] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA11] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA12] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA13] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA14] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA15] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA16] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA17] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA18] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA19] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA20] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_n_attrs PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[names] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[masses] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[resids] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[bonds] PASSED [ 27%] 1958s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[tt] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_universe_copy PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_positions PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_change_positions PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_topology PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_change_topology PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_copying.py::test_pdb_copy PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_total_frags[u0] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_total_frags[u1] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_external_ordering[u0] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_external_ordering[u1] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_internal_ordering[u0] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_internal_ordering[u1] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atom_access[u0] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atom_access[u1] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_access[u0] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_access[u1] PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_empty_atomgroup_access PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_fragments_nobonds_NDE PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atom_fragment_nobonds_NDE PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_fragment_cache_invalidation_bond_making PASSED [ 27%] 1959s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_fragment_cache_invalidation_bond_breaking PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_fragments.py::test_tpr_fragments PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-False-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-True-False] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-False-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-True-True] PASSED [ 27%] 1960s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_force_get PASSED [ 27%] 1961s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_velocity_get PASSED [ 27%] 1961s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_force_set PASSED [ 27%] 1961s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_velocity_set PASSED [ 27%] 1961s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_pos_iteration PASSED [ 27%] 1962s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_vel_iteration PASSED [ 27%] 1962s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_for_iteration PASSED [ 27%] 1962s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestGROVelocities::testParse_velocities PASSED [ 27%] 1962s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestTRRForces::testForces PASSED [ 27%] 1962s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestTRRForcesNativeUnits::testForces PASSED [ 27%] 1963s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupVelocities::test_get_velocities PASSED [ 27%] 1963s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupVelocities::test_velocities PASSED [ 27%] 1963s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupVelocities::test_set_velocities PASSED [ 27%] 1963s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupForces::test_get_forces PASSED [ 27%] 1963s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupForces::test_forces PASSED [ 27%] 1963s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupForces::test_set_forces PASSED [ 27%] 1963s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_dimensions PASSED [ 27%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_isunique[group0] PASSED [ 27%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_isunique[group1] PASSED [ 27%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_isunique[group2] PASSED [ 27%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_nocache[group0] PASSED [ 27%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_nocache[group1] PASSED [ 27%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_nocache[group2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_create_unique_group_from_unique[group0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_create_unique_group_from_unique[group1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_create_unique_group_from_unique[group2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix0-unique_ix0-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix0-unique_ix0-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix0-unique_ix0-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix1-unique_ix1-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix1-unique_ix1-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix1-unique_ix1-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix0-False-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix0-False-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix0-False-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix1-True-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix1-True-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix1-True-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix2-True-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix2-True-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix2-True-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix0-True-unique_ix0-True-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix0-True-unique_ix0-True-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix0-True-unique_ix0-True-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix1-False-unique_ix1-True-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix1-False-unique_ix1-True-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix1-False-unique_ix1-True-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix2-True-unique_ix2-False-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix2-True-unique_ix2-False-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix2-True-unique_ix2-False-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix3-False-unique_ix3-True-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix3-False-unique_ix3-True-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix3-False-unique_ix3-True-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix4-True-unique_ix4-False-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix4-True-unique_ix4-False-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix4-True-unique_ix4-False-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix5-False-unique_ix5-False-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix5-False-unique_ix5-False-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix5-False-unique_ix5-False-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix6-True-unique_ix6-False-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix6-True-unique_ix6-False-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix6-True-unique_ix6-False-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix7-False-unique_ix7-False-ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix7-False-unique_ix7-False-ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix7-False-unique_ix7-False-ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_sorted_unsorted_unique[ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_sorted_unsorted_unique[ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_sorted_unsorted_unique[ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_unsorted_sorted_unique[ugroup0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_unsorted_sorted_unique[ugroup1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_unsorted_sorted_unique[ugroup2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestEmptyAtomGroup::test_passive_decorator[ag0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestEmptyAtomGroup::test_error_empty_group[ag0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_atoms[atom] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_atoms[residue] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_atoms[segment] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_residues[atom] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_residues[residue] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_residues[segment] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_segments[atom] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_segments[residue] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_segments[segment] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_len[atom] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_len[residue] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_len[segment] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[atom-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[atom-array] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[residue-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[residue-array] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[segment-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[segment-array] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_indexerror[atom] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_indexerror[residue] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_indexerror[segment] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl0-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl1-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl2-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl3-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl4-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl5-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl6-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl7-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl8-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl9-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl10-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl11-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl12-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl13-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl0-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl1-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl2-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl3-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl4-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl5-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl6-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl7-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl8-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl9-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl10-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl11-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl12-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl13-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl0-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl1-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl2-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl3-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl4-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl5-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl6-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl7-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl8-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl9-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl10-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl11-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl12-list] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl13-] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom-0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom-1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom--1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom--2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue-0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue-1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue--1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue--2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment-0] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment-1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment--1] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment--2] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_none_getitem[atom] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_none_getitem[residue] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_none_getitem[segment] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a0-b0-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a1-b1-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a2-b2-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a3-b3-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a4-b4-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a5-b5-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a6-b6-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a7-b7-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a8-b8-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a9-b9-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a10-b10-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a11-b11-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a0-b0-c0-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a1-b1-c1-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a2-b2-c2-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a3-b3-c3-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a4-b4-c4-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a5-b5-c5-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a6-b6-c6-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a7-b7-c7-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a8-b8-c8-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a9-b9-c9-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a10-b10-c10-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a11-b11-c11-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a12-b12-c12-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a13-b13-c13-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a14-b14-c14-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a15-b15-c15-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a16-b16-c16-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a17-b17-c17-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a18-b18-c18-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a19-b19-c19-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a20-b20-c20-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a21-b21-c21-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a22-b22-c22-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a23-b23-c23-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a0-b0-c0-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a1-b1-c1-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a2-b2-c2-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a3-b3-c3-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a4-b4-c4-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a5-b5-c5-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a6-b6-c6-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a7-b7-c7-AtomGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a8-b8-c8-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a9-b9-c9-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a10-b10-c10-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a11-b11-c11-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a12-b12-c12-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a13-b13-c13-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a14-b14-c14-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a15-b15-c15-ResidueGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a16-b16-c16-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a17-b17-c17-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a18-b18-c18-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a19-b19-c19-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a20-b20-c20-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a21-b21-c21-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a22-b22-c22-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a23-b23-c23-SegmentGroup] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains[atom] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains[residue] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains[segment] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_false[atom] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_false[residue] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_false[segment] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[atom-residue] PASSED [ 28%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[atom-segment] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[residue-atom] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[residue-segment] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[segment-atom] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[segment-residue] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a0-b0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a1-b1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a2-b2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a3-b3] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a4-b4] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a5-b5] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a6-b6] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a7-b7] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a8-b8] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a9-b9] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a10-b10] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a11-b11] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a12-b12] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a13-b13] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a14-b14] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a15-b15] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a16-b16] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a17-b17] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a18-b18] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a19-b19] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a20-b20] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a21-b21] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a22-b22] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a23-b23] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_atomgroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_residuegroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_segmentgroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_atomgroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_residuegroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_segmentgroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_atomgroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_residuegroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_segmentgroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atom_to_residue PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atom_to_segment PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residue_to_atomgroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residue_to_segment PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segment_to_atomgroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segment_to_residuegroup PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_residuegroup_unique PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_segmentgroup_unique PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_segmentgroup_unique PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_atomgroup_listcomp PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_residuegroup_listcomp PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_atomgroup_listcomp PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_lt[abc0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_lt[abc1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_lt[abc2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_gt[abc0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_gt[abc1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_gt[abc2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_ge[abc0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_ge[abc1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_ge[abc2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_le[abc0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_le[abc1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_le[abc2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_neq[abc0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_neq[abc1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_neq[abc2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_eq[abc0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_eq[abc1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_eq[abc2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_sorting[abc0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_sorting[abc1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_sorting[abc2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x0-y0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x1-y1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x2-y2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x3-y3] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x4-y4] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x5-y5] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x0-y0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x1-y1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x2-y2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x3-y3] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x4-y4] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x5-y5] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestMetaclassMagic::test_new_class PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_float PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string[segids0] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string[segids1] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string[segids2] PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_int PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_float_string PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_int_float PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string_int PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atom_repr PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residue_repr PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_segment_repr PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atomgroup_repr PASSED [ 29%] 1964s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atomgroup_str_short PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atomgroup_str_long PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residuegroup_repr PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residuegroup_str_short PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residuegroup_str_long PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_segmentgroup_repr PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_segmentgroup_str PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len[atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len[residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len[segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len_duplicated_and_scrambled[atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len_duplicated_and_scrambled[residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len_duplicated_and_scrambled[segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_copy[group0] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_copy[group1] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_copy[group2] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[simple-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[simple-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[simple-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[scrambled-atoms] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[scrambled-residues] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[scrambled-segments] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left0-right0] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left1-right1] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left2-right2] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left3-right3] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left4-right4] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left5-right5] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left6-right6] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left7-right7] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left8-right8] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left9-right9] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left10-right10] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left11-right11] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left12-right12] PASSED [ 29%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left13-right13] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left14-right14] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left15-right15] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left16-right16] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left17-right17] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left18-right18] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left19-right19] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left20-right20] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left21-right21] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left22-right22] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left23-right23] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left24-invalid] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left0-right0] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left1-right1] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left2-right2] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left3-right3] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left4-right4] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left5-right5] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left6-right6] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left7-right7] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left8-right8] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left9-right9] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left10-right10] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left11-right11] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_only_same_level_different_universes PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-add-concatenate] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-sub-difference] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-and_-intersection] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-or_-union] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-xor-symmetric_difference] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-add-concatenate] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-sub-difference] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-and_-intersection] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-or_-union] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-xor-symmetric_difference] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-add-concatenate] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-sub-difference] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-and_-intersection] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-or_-union] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-xor-symmetric_difference] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_exists[atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_exists[residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_exists[segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_equality[atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_equality[residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_equality[segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference[atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference[residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference[segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[atoms-residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[atoms-segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[residues-atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[residues-segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[segments-atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[segments-residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_diff_cross_universe[atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_diff_cross_universe[residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_diff_cross_universe[segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAtomGroup::test_PDB_atom_repr PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_group_fail[atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_group_fail[residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_group_fail[segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_component_fails[atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_component_fails[residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_component_fails[segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[atoms-name] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[atoms-resid] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[atoms-segid] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[residues-name] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[residues-resid] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[residues-segid] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[segments-name] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[segments-resid] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[segments-segid] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_atom_set_name PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_atom_set_resid PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_atom_set_segid PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_residue_set_name PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_residue_set_resid PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_residue_set_segid PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_segment_set_name PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_segment_set_resid PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_segment_set_segid PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[atoms-names] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[atoms-resids] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[atoms-segids] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[residues-names] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[residues-resids] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[residues-segids] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[segments-names] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[segments-resids] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[segments-segids] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_group[masses] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_group[altLocs] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_component[mass] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_component[altLoc] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_plural_topattr_from_component[masses-mass] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_plural_topattr_from_component[altLocs-altLoc] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_sing_topattr_from_group[masses-mass] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_sing_topattr_from_group[altLocs-altLoc] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_topattr_group[elements-element] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_topattr_group[tempfactors-tempfactor] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_topattr_group[bonds-bonds] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_non_topattr PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_unwrap_without_bonds PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_attr_method PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_attrprop PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_attrprop_wrong_group PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_attrmethod_wrong_group PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_wrong_name[altlocs] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_wrong_name[alt_Locs] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_object_init[atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_object_init[residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_object_init[segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_number_init[atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_number_init[residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_number_init[segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni[atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni[residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni[segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni_2[atoms] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni_2[residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni_2[segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-fragments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-molecules] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-group] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-fragments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-molecules] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-group] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-fragments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-molecules] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-group] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-fragments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-molecules] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-residues] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-group] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-segments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-fragments] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-molecules] PASSED [ 30%] 1965s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-residues] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-group] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-segments] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-fragments] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-molecules] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-residues] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-group] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-segments] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-fragments] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-molecules] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-residues] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-group] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-segments] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-fragments] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-molecules] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-residues] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-group] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-segments] PASSED [ 30%] 1966s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[bonds] PASSED [ 30%] 1967s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[angles] PASSED [ 30%] 1967s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[dihedrals] PASSED [ 30%] 1968s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[impropers] PASSED [ 30%] 1968s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_outside[bonds-1] PASSED [ 30%] 1969s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_outside[angles-3] PASSED [ 30%] 1969s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_outside[dihedrals-4] PASSED [ 30%] 1970s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_not_outside[bonds-9] PASSED [ 30%] 1970s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_not_outside[angles-15] PASSED [ 30%] 1971s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_not_outside[dihedrals-12] PASSED [ 30%] 1971s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_outside[bonds-13] PASSED [ 30%] 1972s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_outside[angles-27] PASSED [ 30%] 1973s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_outside[dihedrals-38] PASSED [ 30%] 1973s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_invalid_connection_error PASSED [ 30%] 1973s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_get_empty_group[True] PASSED [ 30%] 1974s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_get_empty_group[False] PASSED [ 30%] 1975s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[bonds-9] PASSED [ 30%] 1975s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[angles-14] PASSED [ 30%] 1975s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[dihedrals-9] PASSED [ 30%] 1976s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[impropers-0] PASSED [ 30%] 1976s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[bonds-11] PASSED [ 30%] 1977s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[angles-22] PASSED [ 30%] 1978s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[dihedrals-27] PASSED [ 30%] 1978s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[impropers-0] PASSED [ 30%] 1978s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_not_outside[bonds-157] PASSED [ 30%] 1979s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_not_outside[angles-290] PASSED [ 30%] 1980s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_not_outside[dihedrals-351] PASSED [ 30%] 1980s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_outside[bonds-158] PASSED [ 30%] 1981s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_outside[angles-294] PASSED [ 30%] 1981s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_outside[dihedrals-360] PASSED [ 30%] 1981s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_invalid_connection_error PASSED [ 30%] 1982s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_get_empty_group[True] PASSED [ 30%] 1983s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_get_empty_group[False] PASSED [ 30%] 1983s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_inside[intra_bonds-9] PASSED [ 30%] 1984s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_inside[intra_angles-15] PASSED [ 31%] 1984s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_inside[intra_dihedrals-12] PASSED [ 31%] 1985s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_outside[bonds-13] PASSED [ 31%] 1985s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_outside[angles-27] PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_outside[dihedrals-38] PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_ag_ix PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_rg_ix PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_sg_ix PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atom_ix_array PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residue_ix_array PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segment_ix_array PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atomgroup_indices PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atomgroup_residue_upshift PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atomgroup_segment_upshift PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residuegroup_atom_downshift PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residuegroup_resindices PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residuegroup_segment_upshift PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segmentgroup_atom_downshift PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segmentgroup_residue_downshift PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segmentgroup_segindices PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_requires_failure_singular PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_requires_failure_multiple PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_requires_success PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_failure_errormessage PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_residue.py::test_type PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_residue.py::test_index PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_residue.py::test_atom_order PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_residue.py::test_residue_pickle PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_residuegroup.py::test_sequence_import_error SKIPPED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_string PASSED [ 31%] 1986s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_SeqRecord PASSED [ 31%] 1987s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_SeqRecord_default PASSED [ 31%] 1987s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_Seq PASSED [ 31%] 1987s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_nonIUPACresname_VE PASSED [ 31%] 1987s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_format_TE PASSED [ 31%] 1987s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_newResidueGroup PASSED [ 31%] 1987s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_n_atoms PASSED [ 31%] 1987s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_n_residues PASSED [ 31%] 1987s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_resids_dim PASSED [ 31%] 1987s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_resnums_dim PASSED [ 31%] 1987s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_segids_dim PASSED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_len PASSED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resids PASSED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resids_updates_self PASSED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resnum_single PASSED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resnum_many PASSED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resnum_ValueError PASSED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resname_single SKIPPED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resname_many SKIPPED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resname_ValueError SKIPPED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_merge_residues SKIPPED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_masses SKIPPED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_atom_order PASSED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_get_next_residue PASSED [ 31%] 1988s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_get_prev_residue PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_residuegroup_pickle[name CA] PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_residuegroup_pickle[segid 4AKE] PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_type PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_index PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_slicing PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_advanced_slicing PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_atom_order PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_residue_pickle[1] PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_residue_pickle[-1] PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_newSegmentGroup PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_n_atoms PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_n_residues PASSED [ 31%] 1989s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_resids_dim PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_resnums_dim PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_segids_dim PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_set_segids PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_set_segid_updates_ PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_set_segids_many PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_atom_order PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_segmentgroup_pickle PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_a2r PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_r2a_1d PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_r2a_2d PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_r2s PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2r_1d PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2r_2d PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2a_1d PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2a_2d PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_move_atom_simple PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_move_residue_simple PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_lazy_building_RA PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_lazy_building_SR PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_serialization PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_single_residue PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residuegroup PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residue_list PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_residuegroup_TE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_residue_list_TE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residuegroup_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residue_list_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_TE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_TE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_list_TE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_segment_NIE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_segment_NIE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_single_segment PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_segmentgroup PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_segment_list PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue_segmentgroup_TE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue_list_TE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_segmentgroup_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_list_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue_TE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_TE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_list_TE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_downshift_dtype_square PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_downshift_dtype_ragged PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_shape_square PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_shape_ragged PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_contents_square PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_contents_ragged PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_intra_values PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_intra_values_2 PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_end_values PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_end_values_2 PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_start_values_2 PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_segment_no_attrs PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_residue_no_attrs PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_residue_no_attrs_one_segment PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_ambiguous_segment_NDE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_missing_attr_NDE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_NDE_message PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_NDE_message_2 PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_with_attrs PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_missing_attr_NDE_Segment PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Segment_NDE_message PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Segment_with_attr PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyGuessed::test_guessed PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyGuessed::test_read PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyCreation::test_make_topology_no_attrs PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyCreation::test_resindex_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyCreation::test_segindex_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_len PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atom_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_get_atoms PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atoms_singular PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atoms_plural PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atoms_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_get_residues PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_get_segments PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_len PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atom_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_get_atoms PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atoms_singular PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atoms_plural PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atoms_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_get_residues PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_get_segments PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestIndicesClasses::test_cant_set_atom_indices PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestIndicesClasses::test_cant_set_residue_indices PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestIndicesClasses::test_cant_set_segment_indices PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_len PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atom_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_get_atoms PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atoms_singular PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atoms_plural PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atoms_VE PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_get_residues PASSED [ 31%] 1990s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_get_segments PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_prev_emptyresidue PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_next_emptyresidue PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_missing_values PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_missing_value_label PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_len PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atom_VE PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_atoms PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atoms_singular PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atoms_plural PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atoms_VE PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_residues PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_segments PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_segment PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_missing_masses PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_len PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atom_VE PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_atoms PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atoms_singular PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atoms_plural PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atoms_VE PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_residues PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_segments PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_segment PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_len PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residue_VE PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_atoms PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_atom PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_residues PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residues_singular PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residues_plural PASSED [ 31%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residues_VE PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_segments PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_len PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residue_VE PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_atoms PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_atom PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_residues PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residues_singular PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residues_plural PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residues_VE PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_segments PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_len PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residue_VE PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_atoms PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_atom PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_residues PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residues_singular PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residues_plural PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residues_VE PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_segments PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_len PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residue_VE PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_atoms PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_atom PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_residues PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues_singular PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues_plural PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues_VE PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_segments PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_atoms XFAIL [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_len PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segment_VE PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_get_atoms PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_get_residues PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_get_segments PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segments_singular PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segments_plural PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segments_VE PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_principal_axes PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_principal_axes_handedness PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_align_principal_axes_with_self PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_align_principal_axes_with_x PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[0-names-0-level0] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[0-names-1-level1] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[0-names-2-level2] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[1-resids-0-level0] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[1-resids-1-level1] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[1-resids-2-level2] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[2-segids-0-level0] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[2-segids-1-level1] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[2-segids-2-level2] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_record_types_default PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_encoding PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_residue_record_types PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_segment_record_types PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_static_typing PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_static_typing_from_empty PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[atoms-center_of_mass] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[atoms-center_of_charge] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[atoms-total_charge] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[residues-total_charge] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_property[universe-models] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_property[atoms-n_fragments] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_warn_selection_for_strange_dtype PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_get_group PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_get_atom PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_set_group PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_set_atom PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactor_sel PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_residue[ResA] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_residue[ResB] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_segment[SegA] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_segment[SegB] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_issue3437 PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[group] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[segments] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[residues] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[molecules] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[fragments] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[group] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[segments] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[residues] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[molecules] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[fragments] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[group] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[segments] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[residues] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[molecules] PASSED [ 32%] 1991s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[fragments] PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_repr PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_eq PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ne PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_gt PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_lt PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_iter PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_len PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_hash PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_indices PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_partner PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_partner_VE PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_bondlength PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_bondrepr PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_angle PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_angle_repr PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_angle_180 PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_dihedral PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_dihedral_repr PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_improper PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_improper_repr PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_repr PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_repr_VE PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_partner PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_distance PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_cmap_repr PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_cmap_repr_VE PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_len PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_iter PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_keyerror PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_universe PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bonds_types PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bonds_contains PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_uniqueness PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_reversal PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_no_reversal PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_types PASSED [ 32%] 1992s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_contains PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_uniqueness PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_reversal PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_types PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_contains PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_uniqueness PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_reversal PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bad_creation PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bad_creation_TG PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_tg_creation_bad_btype PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_tg_creation_notype PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angle_tg_creation_notype PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedral_tg_creation_notype PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_create_guessed_tg PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_create_guessed_tg_2 PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_equality PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_create_TopologyGroup PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[bonds] PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[angles] PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[dihedrals] PASSED [ 32%] 1993s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[impropers] PASSED [ 32%] 1994s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_strict_intersection PASSED [ 32%] 1994s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_TopologyGroups PASSED [ 32%] 1994s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_empty_to_TG PASSED [ 32%] 1994s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_TO_to_empty_TG PASSED [ 32%] 1994s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_TG_to_empty_TG PASSED [ 32%] 1994s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_singleitem PASSED [ 32%] 1994s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_wrongtype_TopologyGroup PASSED [ 32%] 1994s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bad_add_TopologyGroup PASSED [ 32%] 1994s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_single PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_slice PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_fancy PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_bool PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_bool_IE PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom1 PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom2 PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom3_IE PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom3 PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom4_IE PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom4 PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_wrong_type_bonds PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_bonds PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_wrong_type_angles PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_angles PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_wrong_type_dihedrals PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_dihedrals PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_impropers PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_bond_length_pbc PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_cross_universe_eq PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_zero_size_TG_indices_bonds PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_zero_size_TG_indices_angles PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_topology_stringio PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_trajectory_stringio PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_make_universe_stringio_no_format PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_no_trajectory_AE PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_unrecognizedformat_VE PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_unrecognizedformat_VE_msg PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_IE PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_IE_msg PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_filename_IE_msg PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_invalidfile_IE_msg PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_invalidpermissionfile_IE_msg PASSED [ 32%] 1995s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_new_VE PASSED [ 32%] 1996s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_new_memory_reader_success PASSED [ 32%] 1996s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_new_memory_reader_fails PASSED [ 32%] 1996s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_universe_kwargs PASSED [ 32%] 1996s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_universe_topology_class_with_coords PASSED [ 32%] 1996s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_universe_empty_ROMol SKIPPED [ 32%] 1996s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_default SKIPPED [ 32%] 1996s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_from_bad_smiles SKIPPED [ 32%] 1996s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_no_Hs SKIPPED [ 33%] 1996s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_gencoords_without_Hs_error SKIPPED [ 33%] 1996s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_generate_coordinates_numConfs SKIPPED [ 33%] 1997s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_rdkit_kwargs SKIPPED [ 33%] 1997s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_coordinates SKIPPED [ 33%] 1997s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_bad_topology PASSED [ 33%] 1997s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new PASSED [ 33%] 1997s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new_returns_Universe PASSED [ 33%] 1997s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new_None_returns_Universe PASSED [ 33%] 1997s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new_TypeError PASSED [ 33%] 1997s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_structure PASSED [ 33%] 1997s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_multiple_list PASSED [ 33%] 1998s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_multiple_args PASSED [ 33%] 1998s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_pickle PASSED [ 33%] 1998s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_set_dimensions[int] PASSED [ 33%] 1998s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_set_dimensions[float32] PASSED [ 33%] 1998s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_set_dimensions[float64] PASSED [ 33%] 1998s testsuite/MDAnalysisTests/core/test_universe.py::TestTransformations::test_callable PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestTransformations::test_list PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_automatic_type_and_mass_guessing PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_no_type_and_mass_guessing PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_invalid_context PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_invalid_attributes PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_guess_masses_before_types PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_guessing_read_attributes PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessMasses::test_universe_loading_no_warning PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_no_vdwradii PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_with_vdwradii PASSED [ 33%] 1999s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_off PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_arguments PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.55-0.1-2] PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.9-1.6-1] PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.5-0.2-2] PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.1-0.1-0] PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds_no_vdwradii PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds_with_vdwradii PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_guess_bonds_periodicity PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_guess_read_bonds PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_w_timeseries PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_wo_timeseries PASSED [ 33%] 2000s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_w_timeseries_frame_interval PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_wo_timeseries_frame_interval PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_existing_universe PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_frame_interval_convention PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_with_start_stop PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_without_start PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_without_stop PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_step_without_start_stop PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_step_with_start_stop PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_step_dt PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_negative_start PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_negative_stop PASSED [ 33%] 2001s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_transfer_to_memory_kwargs PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_in_memory_kwargs PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_reader PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_reader_singleframe PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_reader_singleframe_2 PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_parser PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_both PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_TA_fail PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_nodefault_fail PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charge-charges-0.0_0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charges-charges-0.0_0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[name-names-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[names-names-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[type-types-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[types-types-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[element-elements-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[elements-elements-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[radius-radii-0.0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[radii-radii-0.0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[chainID-chainIDs-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[chainIDs-chainIDs-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[tempfactor-tempfactors-0.0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[tempfactors-tempfactors-0.0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[mass-masses-0.0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[masses-masses-0.0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charge-charges-0.0_1] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charges-charges-0.0_1] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[bfactor-bfactors-0.0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[bfactors-bfactors-0.0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[occupancy-occupancies-0.0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[occupancies-occupancies-0.0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[altLoc-altLocs-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[altLocs-altLocs-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resid-resids-1] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resids-resids-1] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resname-resnames-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resnames-resnames-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resnum-resnums-1] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resnums-resnums-1] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[icode-icodes-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[icodes-icodes-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[segid-segids-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[segids-segids-] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[bonds-values0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[bonds-values1] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[bonds-values2] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[angles-values3] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[dihedrals-values4] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[impropers-values5] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-values0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-values1] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-rubbish] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-values3] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[angles-values4] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[angles-rubbish] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[dihedrals-values6] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[impropers-values7] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_attr_length_error PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_TA_fail PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_absent_fail PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_wrongtype_fail PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_str[charge-charges] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_str[charges-charges] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_str[bonds-bonds] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_attr PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_transplants PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_attr_error PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_attr_from_ag PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_func_from_universe PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[bonds-values0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[angles-values1] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[dihedrals-values2] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[impropers-values3] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_reversed_duplicates PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[bonds-values0] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[angles-values1] PASSED [ 33%] 2002s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[dihedrals-values2] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[impropers-values3] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[bonds-values0] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[angles-values1] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[dihedrals-values2] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[impropers-values3] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[bonds-values0] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[angles-values1] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[dihedrals-values2] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[impropers-values3] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[bonds-values0] PASSED [ 33%] 2003s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[angles-values1] PASSED [ 33%] 2004s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[dihedrals-values2] PASSED [ 33%] 2004s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[impropers-values3] PASSED [ 33%] 2004s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[bonds-values0] PASSED [ 33%] 2004s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[angles-values1] PASSED [ 33%] 2004s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[dihedrals-values2] PASSED [ 33%] 2004s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[impropers-values3] PASSED [ 33%] 2004s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[bonds-values0] PASSED [ 33%] 2005s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[angles-values1] PASSED [ 33%] 2005s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[dihedrals-values2] PASSED [ 33%] 2005s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[impropers-values3] PASSED [ 33%] 2005s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[bonds-values0] PASSED [ 33%] 2005s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[angles-values1] PASSED [ 33%] 2005s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[dihedrals-values2] PASSED [ 33%] 2005s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[impropers-values3] PASSED [ 33%] 2006s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[bonds-values0] PASSED [ 33%] 2006s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[angles-values1] PASSED [ 33%] 2006s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[dihedrals-values2] PASSED [ 33%] 2006s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[impropers-values3] PASSED [ 33%] 2006s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[bonds-values0] PASSED [ 33%] 2006s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[angles-values1] PASSED [ 33%] 2006s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[dihedrals-values2] PASSED [ 33%] 2006s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[impropers-values3] PASSED [ 33%] 2006s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[impropers-values0] PASSED [ 33%] 2006s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[dihedrals-values1] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[angles-values2] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[bonds-values3] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[bonds-values0] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[angles-values1] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[dihedrals-values2] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[impropers-values3] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[bonds-2] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[angles-3] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[dihedrals-4] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[impropers-4] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_bonds_refresh_fragments PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[bonds-values0] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[angles-values1] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[dihedrals-values2] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[impropers-values3] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[bonds-values0] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[angles-values1] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[dihedrals-values2] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[impropers-values3] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[bonds-values0] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[angles-values1] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[dihedrals-values2] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[impropers-values3] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[bonds-values0] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[angles-values1] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[dihedrals-values2] PASSED [ 33%] 2007s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[impropers-values3] PASSED [ 33%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[bonds-values0] PASSED [ 33%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[angles-values1] PASSED [ 33%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[dihedrals-values2] PASSED [ 33%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[impropers-values3] PASSED [ 33%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[bonds-values0] PASSED [ 33%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[angles-values1] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[dihedrals-values2] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[impropers-values3] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[bonds-values0] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[angles-values1] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[dihedrals-values2] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[impropers-values3] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[bonds-values0] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[angles-values1] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[dihedrals-values2] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[impropers-values3] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[bonds-values0] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[angles-values1] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[dihedrals-values2] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[impropers-values3] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[bonds-values0] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[angles-values1] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[dihedrals-values2] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[impropers-values3] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[bonds-values0] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[angles-values1] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[dihedrals-values2] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[impropers-values3] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[bonds-values0] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[angles-values1] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[dihedrals-values2] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[impropers-values3] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[bonds-2] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[angles-3] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[dihedrals-4] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[impropers-4] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[bonds-values0] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[angles-values1] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[dihedrals-values2] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[impropers-values3] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_bonds_refresh_fragments PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_all_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/1hvr.pdb-72] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_all_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/conect_parsing.pdb-8] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[bonds-values0] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[angles-values1] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[dihedrals-values2] PASSED [ 34%] 2008s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[impropers-values3] PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestAllCoordinatesKwarg::test_all_coordinates_length PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestAllCoordinatesKwarg::test_all_coordinates_frame PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestAllCoordinatesKwarg::test_second_frame PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty_extra PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_no_resindex_warning PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_no_segindex_warning PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_no_trivial_warning PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_trajectory PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_trajectory_multiple_frames PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_trajectory_iteration PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_velocities PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_forces PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty_no_atoms PASSED [ 34%] 2009s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty_creation_raises_error PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_universe.py::test_deprecate_b_tempfactors PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_universe.py::TestOnlyTopology::test_only_top PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-fragments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-fragments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-fragments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-molecules-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-molecules-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-molecules-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-residues-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-residues-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-residues-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-group-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-group-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-group-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-segments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-segments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-segments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-fragments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-fragments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-fragments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-molecules-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-molecules-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-molecules-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-residues-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-residues-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-residues-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-group-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-group-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-group-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-segments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-segments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-segments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-fragments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-fragments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-fragments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-molecules-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-molecules-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-molecules-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-residues-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-residues-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-residues-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-group-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-group-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-group-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-segments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-segments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-segments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-fragments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-fragments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-fragments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-molecules-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-molecules-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-molecules-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-residues-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-residues-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-residues-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-group-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-group-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-group-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-segments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-segments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-segments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-fragments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-fragments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-fragments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-molecules-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-molecules-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-molecules-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-residues-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-residues-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-residues-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-group-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-group-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-group-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-segments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-segments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-segments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-fragments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-fragments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-fragments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-molecules-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-molecules-residues] PASSED [ 34%] 2011s 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testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-segments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-segments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-fragments-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-fragments-residues] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-fragments-segments] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-molecules-atoms] PASSED [ 34%] 2011s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-molecules-residues] PASSED [ 34%] 2011s 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testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-segments-segments] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-fragments] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-molecules] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-residues] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-group] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-segments] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-fragments] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-molecules] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-residues] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-group] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-segments] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-fragments] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-molecules] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-residues] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-group] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-segments] PASSED [ 35%] 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testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-group] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-segments] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-fragments] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-molecules] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-residues] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-group] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-segments] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-fragments-atoms] PASSED [ 35%] 2012s 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testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-molecules-atoms] PASSED [ 35%] 2012s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-molecules-residues] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-molecules-segments] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-residues-atoms] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-residues-residues] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-residues-segments] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-group-atoms] PASSED [ 35%] 2013s 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testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-fragments-residues] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-fragments-segments] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-molecules-atoms] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-molecules-residues] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-molecules-segments] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-residues-atoms] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-residues-residues] PASSED [ 35%] 2013s 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testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-fragments-atoms] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-fragments-residues] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-fragments-segments] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-molecules-atoms] PASSED [ 35%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-molecules-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-molecules-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-residues-atoms] PASSED [ 36%] 2013s 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testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-segments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-fragments-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-fragments-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-fragments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-molecules-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-molecules-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-molecules-segments] PASSED [ 36%] 2013s 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testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-molecules-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-molecules-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-residues-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-residues-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-residues-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-group-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-group-residues] PASSED [ 36%] 2013s 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testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[fragments-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[fragments-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[fragments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[molecules-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[molecules-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[molecules-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[residues-atoms] PASSED [ 36%] 2013s 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testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[segments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[com-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[com-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[com-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[cog-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[cog-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[cog-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[None-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[None-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[None-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[fragments-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[fragments-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[fragments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[molecules-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[molecules-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[molecules-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[residues-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[residues-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[residues-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[group-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[group-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[group-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[segments-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[segments-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[segments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-fragments-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-fragments-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-fragments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-molecules-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-molecules-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-molecules-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-residues-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-residues-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-residues-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-group-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-group-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-group-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-segments-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-segments-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-segments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-fragments-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-fragments-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-fragments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-molecules-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-molecules-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-molecules-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-residues-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-residues-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-residues-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-group-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-group-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-group-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-segments-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-segments-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-segments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-fragments-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-fragments-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-fragments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-molecules-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-molecules-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-molecules-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-residues-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-residues-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-residues-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-group-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-group-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-group-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-segments-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-segments-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-segments-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[com-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[com-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[com-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[cog-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[cog-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[cog-segments] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[None-atoms] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[None-residues] PASSED [ 36%] 2013s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[None-segments] PASSED [ 36%] 2014s testsuite/MDAnalysisTests/core/test_unwrap.py::test_uncontiguous PASSED [ 36%] 2014s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_update PASSED [ 36%] 2014s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_compounded_update PASSED [ 36%] 2015s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_chained_update PASSED [ 36%] 2015s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_chained_update2 PASSED [ 36%] 2015s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_slice_is_static PASSED [ 36%] 2016s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_kwarg_check PASSED [ 36%] 2016s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_atoms PASSED [ 36%] 2016s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_copy PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelectionNotraj::test_update PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUAGCallCount::test_updated_when_creating PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUAGCallCount::test_updated_when_next PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestDynamicUAG::test_nested_uags PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestDynamicUAG::test_driveby PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::test_representations PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::test_empty_UAG PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-atoms-atoms] PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-atoms-residues] PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-atoms-segments] PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-group-atoms] PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-group-residues] PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-group-segments] PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-segments-atoms] PASSED [ 36%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-segments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-segments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-residues-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-residues-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-residues-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-molecules-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-molecules-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-molecules-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-fragments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-fragments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-fragments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-atoms-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-atoms-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-atoms-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-group-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-group-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-group-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-segments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-segments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-segments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-residues-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-residues-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-residues-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-molecules-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-molecules-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-molecules-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-fragments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-fragments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-fragments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-atoms-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-atoms-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-atoms-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-group-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-group-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-group-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-segments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-segments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-segments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-residues-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-residues-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-residues-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-molecules-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-molecules-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-molecules-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-fragments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-fragments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-fragments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-atoms-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-atoms-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-atoms-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-group-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-group-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-group-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-segments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-segments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-segments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-residues-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-residues-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-residues-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-molecules-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-molecules-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-molecules-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-fragments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-fragments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-fragments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-atoms-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-atoms-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-atoms-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-group-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-group-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-group-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-segments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-segments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-segments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-residues-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-residues-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-residues-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-molecules-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-molecules-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-molecules-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-fragments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-fragments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-fragments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-atoms-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-atoms-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-atoms-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-group-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-group-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-group-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-segments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-segments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-segments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-residues-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-residues-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-residues-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-molecules-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-molecules-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-molecules-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-fragments-atoms] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-fragments-residues] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-fragments-segments] PASSED [ 37%] 2017s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-atoms-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-atoms-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-atoms-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-group-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-group-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-group-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-segments-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-segments-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-segments-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-residues-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-residues-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-residues-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-molecules-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-molecules-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-molecules-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-fragments-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-fragments-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-fragments-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-atoms-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-atoms-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-atoms-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-group-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-group-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-group-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-segments-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-segments-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-segments-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-residues-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-residues-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-residues-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-molecules-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-molecules-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-molecules-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-fragments-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-fragments-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-fragments-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-atoms-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-atoms-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-atoms-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-group-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-group-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-group-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-segments-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-segments-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-segments-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-residues-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-residues-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-residues-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-molecules-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-molecules-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-molecules-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-fragments-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-fragments-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-fragments-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-atoms-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-atoms-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-atoms-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-group-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-group-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-group-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-segments-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-segments-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-segments-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-residues-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-residues-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-residues-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-molecules-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-molecules-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-molecules-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-fragments-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-fragments-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-fragments-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-atoms-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-atoms-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-atoms-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-group-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-group-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-group-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-segments-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-segments-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-segments-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-residues-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-residues-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-residues-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-molecules-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-molecules-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-molecules-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-fragments-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-fragments-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-fragments-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-atoms-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-atoms-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-atoms-segments] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-group-atoms] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-group-residues] PASSED [ 37%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-group-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-segments-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-segments-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-segments-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-residues-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-residues-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-residues-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-molecules-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-molecules-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-molecules-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-fragments-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-fragments-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-fragments-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-atoms-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-atoms-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-atoms-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-group-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-group-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-group-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-segments-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-segments-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-segments-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-residues-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-residues-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-residues-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-molecules-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-molecules-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-molecules-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-fragments-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-fragments-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-fragments-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-atoms-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-atoms-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-atoms-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-group-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-group-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-group-segments] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-segments-atoms] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-segments-residues] PASSED [ 38%] 2018s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-segments-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-residues-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-residues-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-residues-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-molecules-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-molecules-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-molecules-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-fragments-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-fragments-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-fragments-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-atoms-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-atoms-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-atoms-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-group-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-group-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-group-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-segments-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-segments-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-segments-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-residues-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-residues-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-residues-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-molecules-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-molecules-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-molecules-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-fragments-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-fragments-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-fragments-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-atoms-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-atoms-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-atoms-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-group-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-group-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-group-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-segments-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-segments-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-segments-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-residues-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-residues-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-residues-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-molecules-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-molecules-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-molecules-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-fragments-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-fragments-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-fragments-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-atoms-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-atoms-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-atoms-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-group-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-group-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-group-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-segments-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-segments-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-segments-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-residues-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-residues-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-residues-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-molecules-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-molecules-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-molecules-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-fragments-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-fragments-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-fragments-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-atoms-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-atoms-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-atoms-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-group-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-group-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-group-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-segments-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-segments-residues] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-segments-segments] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-residues-atoms] PASSED [ 38%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-residues-residues] PASSED [ 38%] 2019s 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testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-group-atoms] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-group-residues] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-group-segments] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-segments-atoms] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-segments-residues] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-segments-segments] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-residues-atoms] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-residues-residues] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-residues-segments] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-molecules-atoms] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-molecules-residues] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-molecules-segments] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-fragments-atoms] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-fragments-residues] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-fragments-segments] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-atoms-atoms] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-atoms-residues] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-atoms-segments] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-group-atoms] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-group-residues] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-group-segments] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-segments-atoms] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-segments-residues] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-segments-segments] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-residues-atoms] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-residues-residues] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-residues-segments] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-molecules-atoms] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-molecules-residues] PASSED [ 39%] 2019s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-molecules-segments] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-fragments-atoms] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-fragments-residues] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-fragments-segments] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_box_fail[box0] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_box_fail[box1] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_small_box PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_large_box PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_atoms PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_group[com] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_group[cog] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_residues[com] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_residues[cog] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_segments[com] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_segments[cog] PASSED [ 39%] 2020s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_fragments[com] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_fragments[cog] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_is_periodic[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-False] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_is_periodic[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-True] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_is_periodic[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-True] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coordsshape[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coordsshape[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-5545] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coordsshape[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-375] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_unit_cell[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-unit_cell0] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_unit_cell[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-unit_cell1] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_unit_cell[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-unit_cell2] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_over_max PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_last PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_closed PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_after_read PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_immediately PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_normal[10] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_normal[42] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_normal[21] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_negative PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_iteration PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_open_wrong_mode PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_raise_not_existing PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_zero_based_frames_counting PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_natoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_natoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-5545] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_natoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-375] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_closed PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_length_traj[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-98] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_length_traj[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-1] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_length_traj[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-10] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_write_mode_file PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_iterating_twice PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_header_remarks[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-* DIMS ADK SEQUENCE FOR PORE PROGRAM * WRITTEN BY LIZ DENNING (6.2008) * DATE: 6/ 6/ 8 17:23:56 CREATED BY USER: denniej0 ] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_header_remarks[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-Created by DCD pluginREMARKS Created 06 July, 2014 at 17:29Y5~CORD,] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_header_remarks[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-* CHARMM TRICLINIC BOX TESTING * (OLIVER BECKSTEIN 2014) * BASED ON NPTDYN.INP : SCOTT FELLER, NIH, 7/15/95 * TEST EXTENDED SYSTEM CONSTANT PRESSURE AND TEMPERATURE * DYNAMICS WITH WATER BOX. * DATE: 7/ 7/14 13:59:46 CREATED BY USER: oliver ] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coord_values[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_adk_coords.npy-frames0] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coord_values[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy-frames1] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coord_values[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_c36_coords.npy-frames2] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_adk_coords.npy-frame_idx0] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy-frame_idx1] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/legacy_DCD_c36_coords.npy-frame_idx2] PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_header PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_no_header PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_header_twice PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_header_wrong_mode PASSED [ 39%] 2021s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_mode PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_remarks_property PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_header PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_num_frames PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_dcd_coordinate_data_shape PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_seek PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_coord_match PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_unit_cell PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[int32] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[int64] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[float32] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[float64] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[int] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[float] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_array_like[array] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_array_like[list] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_wrong_shape_xyz PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_wrong_shape_box PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_relative_frame_sizes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_relative_frame_sizes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_relative_frame_sizes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_file_size_breakdown[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_file_size_breakdown[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_file_size_breakdown[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_nframessize_int[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_nframessize_int[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_nframessize_int[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice0-98] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice1-98] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice2-98] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice3-98] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice4-98] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice5-2] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice6-10] PASSED [ 39%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice7-8] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice8-1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice9-0] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice10-1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice11-1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice12-2] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice13-1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice14-1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice15-2] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice16-4] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice17-3] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice18-2] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[fac-shape0] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[fca-shape1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[afc-shape2] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[acf-shape3] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[caf-shape4] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[cfa-shape5] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_atomindices[indices0] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_atomindices[indices1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_atomindices[indices2] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_random_unitcell PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_natoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_natoms[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_over_seek[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_over_seek[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_after_iteration[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_after_iteration[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_zero_based_frame_tell[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_zero_based_frame_tell[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_closed[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_closed[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_iter[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_iter[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_double_iter[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_double_iter[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek_negative[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek_negative[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_len[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_raise_not_existing[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_raise_not_existing[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_open_wrong_mode[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_open_wrong_mode[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_write_mode_file[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_write_mode_file[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_last_frame[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_last_frame[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_closed[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_closed[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_immediately[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_immediately[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_offset[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_offset[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_set_offsets[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_set_offsets[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_fail_wrong_offsets[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_fail_wrong_offsets[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_overflow[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_overflow[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all_bytes[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all_bytes[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_largefile[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_largefile[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_steps[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_steps[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_time[XTCFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_time[TRRFile-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr] PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_box_xtc PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_xyz_xtc PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_box_trr PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_xyz_trr PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_velocities_trr PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_forces_trr PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_lmbda_trr PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_step_xtc PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_time_xtc PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_prec_xtc PASSED [ 40%] 2022s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_box_xtc PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_xyx_xtc PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[int32] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[int64] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[float32] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[float64] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[int] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[float] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_array_like[array] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_array_like[list] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_prec PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_different_box_xtc PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_x_xtc PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_prec PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_step_trr PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_time_trr PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_box_trr PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_xyx_trr PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_velocities_trr PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_forces_trr PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[int32] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[int64] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[float32] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[float64] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[int] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[float] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_array_like[array] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_array_like[list] PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_box_trr PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_natoms PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_x_trr PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_v PASSED [ 40%] 2023s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_f PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_get_guesser PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_get_guesser_with_universe PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_invalid_attribute PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_attribute_with_missing_parent_attr PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_force_guessing PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_partial_guessing PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_force_guess_priority PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_partial_guess_attr_with_unknown_no_value_label PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_existing_read PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_existing_in_universe PASSED [ 40%] 2023s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_force PASSED [ 40%] 2028s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_out_of_order_init PASSED [ 40%] 2033s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_out_of_order_guess PASSED [ 40%] 2033s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_force_guess_overwrites_existing_bonds PASSED [ 40%] 2055s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guessing_angles_respects_bond_kwargs PASSED [ 40%] 2057s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guessing_dihedrals_respects_bond_kwargs PASSED [ 40%] 2057s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_unsupported_attribute PASSED [ 40%] 2057s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_singular PASSED [ 40%] 2059s testsuite/MDAnalysisTests/guesser/test_base.py::test_Universe_guess_bonds_deprecated PASSED [ 40%] 2059s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 40%] 2059s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc] PASSED [ 40%] 2059s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[universe_input2] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.pdb] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_specific_array PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_from_universe PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_from_guesser_object PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_warn PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_get_atom_mass[H-1.008] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_get_atom_mass[XYZ-0.0] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_atom_mass PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_with_no_reference_elements PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_types PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element_empty PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element_singledigit PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element_1H PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_partial_guess_elements PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_elements_from_no_data PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[AO5*-O] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[F--F] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[HB1-H] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[OC2-O] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[1he2-H] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[3hg2-H] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[OH--O] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[HO-H] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[he-H] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[zn-ZN] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[Ca2+-CA] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[CA-C] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_charge PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_Error PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bond_vdw_error PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bond_coord_error PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_angles_with_no_bonds PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_impropers PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_dihedrals_with_no_angles PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_impropers_with_angles PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_impropers_with_no_angles PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water_fudge_factor_passed[0-0] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water_fudge_factor_passed[0.55-4] PASSED [ 40%] 2060s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water_fudge_factor_passed[200-6] PASSED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_adk PASSED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_peptide PASSED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[c1ccccc1] SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[C1=CC=CC=C1] SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[CCO] SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[c1ccccc1Cc1ccccc1] SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[c1ccccc1] SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[C1=CC=CC=C1] SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[CCO] SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[c1ccccc1Cc1ccccc1] SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_aromaticity SKIPPED [ 40%] 2061s testsuite/MDAnalysisTests/import/test_import.py::TestMDAImport::test_os_dot_fork_not_called PASSED [ 40%] 2061s testsuite/MDAnalysisTests/import/test_import.py::TestMDAImport::test_os_dot_fork_not_none PASSED [ 40%] 2061s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q0-res0-b0] PASSED [ 40%] 2061s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q0-res0-b1] PASSED [ 40%] 2061s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q1-res1-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q1-res1-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q2-res2-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q2-res2-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q3-res3-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q3-res3-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q4-res4-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q4-res4-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q5-res5-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q5-res5-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q6-res6-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q6-res6-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q7-res7-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q7-res7-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q8-res8-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q8-res8-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres0-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres0-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres1-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres1-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres2-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres2-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres3-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres3-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres4-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres4-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres5-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres5-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres6-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres6-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres7-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres7-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres8-b0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres8-b1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values3] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values4] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values5] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges0-ref0] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges1-ref1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges2-ref2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges3-ref3] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_in2d PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_in2d_VE[arr10-arr20] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_cutil.py::test_in2d_VE[arr11-arr21] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCheckResultArray::test_check_result_array_pass PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCheckResultArray::test_check_result_array_wrong_shape PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCheckResultArray::test_check_result_array_wrong_dtype PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::test_transform_StoR_pass[float32] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::test_transform_StoR_pass[float64] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_noresults PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_1] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_2] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_1_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_2_atomgroup] PASSED [ 41%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_2] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_1_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_2_atomgroup] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_1] PASSED [ 42%] 2062s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_2] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_1_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_2_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_2] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_1_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_2_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_2] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_1_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_2_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_2] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_1_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_2_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_2] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_1_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_2_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_2] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_1_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_2_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_2] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_1_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_2_atomgroup] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box0-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box0-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box1-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box1-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-None-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-None-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box0-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box0-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box1-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box1-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-None-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-None-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box0-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box0-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box1-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box1-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-None-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-None-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box0-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box0-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box1-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box1-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-None-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-None-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box0-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box0-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box1-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box1-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-None-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-None-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box0-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box0-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box1-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box1-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-None-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-None-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box0-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box0-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box1-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box1-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-None-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-None-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box0-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box0-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box1-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box1-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-None-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-None-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box0-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box0-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box1-1] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box1-100] PASSED [ 42%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box0-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box0-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box1-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box1-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-None-1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-None-100] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.02-_bruteforce_capped_self-None] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.02-_bruteforce_capped_self-box1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.02-_bruteforce_capped_self-box2] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.2-_bruteforce_capped_self-None] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.2-_bruteforce_capped_self-box1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.2-_bruteforce_capped_self-box2] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.02-_pkdtree_capped_self-None] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.02-_pkdtree_capped_self-box1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.02-_pkdtree_capped_self-box2] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.2-_nsgrid_capped_self-None] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.2-_nsgrid_capped_self-box1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.2-_nsgrid_capped_self-box2] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.02-_bruteforce_capped-None] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.02-_bruteforce_capped-box1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.02-_bruteforce_capped-box2] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-None] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-box1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-box2] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-None] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-box1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-box2] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-None] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-box1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-box2] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-None] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-box1] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-box2] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system_universe-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system_universe-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system_universe-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system_universe-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system_universe-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system_universe-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system_universe-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system_universe-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system_universe-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system_universe-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system_universe-serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system_universe-openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC2[serial] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC2[openmp] PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::test_distance_array_overflow_exception PASSED [ 43%] 2063s testsuite/MDAnalysisTests/lib/test_distances.py::test_self_distance_array_overflow_exception PASSED [ 43%] 2064s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_simple[serial] PASSED [ 43%] 2064s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_simple[openmp] PASSED [ 43%] 2064s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_outarray[serial] PASSED [ 43%] 2064s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_outarray[openmp] PASSED [ 43%] 2064s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_periodic[serial] PASSED [ 43%] 2065s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_periodic[openmp] PASSED [ 43%] 2065s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_simple[serial] PASSED [ 43%] 2065s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_simple[openmp] PASSED [ 43%] 2067s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-serial] PASSED [ 43%] 2069s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-openmp] PASSED [ 43%] 2071s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-serial] PASSED [ 43%] 2073s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-openmp] PASSED [ 43%] 2073s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-serial] PASSED [ 43%] 2073s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-openmp] PASSED [ 43%] 2073s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-serial] PASSED [ 43%] 2073s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-openmp] PASSED [ 43%] 2073s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-serial] PASSED [ 43%] 2073s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-openmp] PASSED [ 43%] 2074s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-serial] PASSED [ 43%] 2074s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-openmp] PASSED [ 43%] 2074s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[all-np_slice0-serial] PASSED [ 43%] 2074s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[all-np_slice0-openmp] PASSED [ 43%] 2074s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice1-serial] PASSED [ 43%] 2074s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice1-openmp] PASSED [ 43%] 2074s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice2-serial] PASSED [ 43%] 2074s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice2-openmp] PASSED [ 43%] 2074s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_simple[serial] PASSED [ 43%] 2074s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_simple[openmp] PASSED [ 43%] 2075s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_outarray[serial] PASSED [ 43%] 2075s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_outarray[openmp] PASSED [ 43%] 2075s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_periodic[serial] PASSED [ 43%] 2075s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_periodic[openmp] PASSED [ 43%] 2075s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_simple[serial] PASSED [ 43%] 2075s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_simple[openmp] PASSED [ 43%] 2076s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-serial] PASSED [ 43%] 2077s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-openmp] PASSED [ 43%] 2078s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-serial] PASSED [ 43%] 2079s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-openmp] PASSED [ 43%] 2079s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-serial] PASSED [ 43%] 2079s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-openmp] PASSED [ 43%] 2079s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-serial] PASSED [ 43%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-openmp] PASSED [ 43%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-serial] PASSED [ 43%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-openmp] PASSED [ 43%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-serial] PASSED [ 43%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-openmp] PASSED [ 43%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice0-serial] PASSED [ 43%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice0-openmp] PASSED [ 43%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice1-serial] PASSED [ 43%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice1-openmp] PASSED [ 43%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol-serial] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol-openmp] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol_single-serial] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol_single-openmp] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_selfdist[serial] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_selfdist[openmp] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_distarray[serial] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_distarray[openmp] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_dist[serial] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_dist[openmp] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_wrong_wassenaar_distance[serial] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_wrong_wassenaar_distance[openmp] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::test_issue_3725[None] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::test_issue_3725[box1] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::test_issue_3725[box2] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::test_HAS_DISTOPIA_incompatible_distopia PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions-float32] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions-float64] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions_atomgroups-float32] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions_atomgroups-float64] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions-float32] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions-float64] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions_atomgroups-float32] PASSED [ 44%] 2080s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions_atomgroups-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badbox[serial] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badbox[openmp] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badresult[serial] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badresult[openmp] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions_atomgroups-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions_atomgroups-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions_atomgroups-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions_atomgroups-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions_atomgroups-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions_atomgroups-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions_atomgroups-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions_atomgroups-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_bad_result[serial] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_bad_result[openmp] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift0-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift0-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift0-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift1-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift1-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift1-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift2-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift2-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift2-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift3-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift3-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift3-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift0-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift0-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift0-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift1-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift1-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift1-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift2-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift2-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift2-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift3-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift3-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift3-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift0-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift0-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift0-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift1-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift1-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift1-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift2-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift2-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift2-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift3-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift3-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift3-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift0-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift0-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift0-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift1-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift1-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift1-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift2-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift2-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift2-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift3-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift3-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift3-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions_atomgroups-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions_atomgroups-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions_atomgroups-float32] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions_atomgroups-float64] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_wronglength[serial] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_wronglength[openmp] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_bad_result[serial] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_bad_result[openmp] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case3] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case4] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case5] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case0] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case1] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case2] PASSED [ 44%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case3] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case4] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case5] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case0] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case1] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case2] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case3] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case4] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case5] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case0] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case1] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case2] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case3] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case4] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case5] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case0] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case1] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case2] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case3] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case4] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case5] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_bonds[serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_bonds[openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_angles[serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_angles[openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_dihedrals[serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_dihedrals[openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_pos-serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_pos-openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_ag-serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_ag-openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_pos_box-serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_pos_box-openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_ag_box-serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_ag_box-openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_strictly_in_central_image_ortho[serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_strictly_in_central_image_ortho[openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_in_central_image_tric[serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_in_central_image_tric[openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_angles[serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_angles[openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_dihedrals[serial] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_dihedrals[openmp] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[serial-box0] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[serial-box1] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[serial-None] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[openmp-box0] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[openmp-box1] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[openmp-None] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[serial-box0] PASSED [ 45%] 2081s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[bruteforce-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[bruteforce-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[bruteforce-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[pkdtree-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[pkdtree-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[pkdtree-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[nsgrid-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[nsgrid-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[nsgrid-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[None-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[None-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[None-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[bruteforce-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[bruteforce-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[bruteforce-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[pkdtree-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[pkdtree-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[pkdtree-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[nsgrid-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[nsgrid-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[nsgrid-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[None-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[None-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[None-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[serial-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[serial-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[serial-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[openmp-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[openmp-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[openmp-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-0.0-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-0.0-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-0.0-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-None-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-None-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-None-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-0.0-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-0.0-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-0.0-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-None-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-None-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-None-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-0.0-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-0.0-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-0.0-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-None-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-None-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-None-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-0.0-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-0.0-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-0.0-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-None-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-None-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-None-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-0.0-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-0.0-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-0.0-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-None-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-None-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-None-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-0.0-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-0.0-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-0.0-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-None-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-None-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-None-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-0.0-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-0.0-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-0.0-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-None-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-None-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-None-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-0.0-box0] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-0.0-box1] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-0.0-None] PASSED [ 45%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[serial-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[serial-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[openmp-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[openmp-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[serial-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[serial-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[openmp-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[openmp-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[serial-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[serial-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[serial-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[openmp-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[openmp-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[openmp-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[serial-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[serial-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[serial-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[openmp-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[openmp-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[openmp-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[serial-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[serial-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[serial-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[openmp-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[openmp-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[openmp-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[serial-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[serial-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[openmp-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[openmp-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords1-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords1-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords1-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords2-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords2-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords2-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords3-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords3-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords3-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords4-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords4-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords4-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords5-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords5-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords5-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords6-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords6-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords6-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords7-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords7-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords7-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords8-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords8-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords8-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords9-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords9-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords9-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords1-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords1-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords1-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords2-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords2-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords2-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords3-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords3-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords3-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords4-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords4-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords4-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords5-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords5-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords5-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords6-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords6-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords6-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords7-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords7-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords7-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords8-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords8-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords8-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords9-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords9-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords9-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords1-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords1-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords1-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords2-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords2-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords2-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords3-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords3-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords3-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords1-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords1-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords1-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords2-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords2-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords2-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords3-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords3-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords3-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-0.0-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-None-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-None-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-None-None] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-0.0-box0] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-0.0-box1] PASSED [ 46%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-0.0-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-0.0-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-0.0-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-None-box0] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-None-box1] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-None-None] PASSED [ 47%] 2082s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-0.0-box0] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-0.0-box1] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-0.0-None] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-None-box0] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-None-box1] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-None-None] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-0.0-box0] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-0.0-box1] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-0.0-None] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-None-box0] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-None-box1] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-None-None] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-0.0-box0] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-0.0-box1] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-0.0-None] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-None-box0] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-None-box1] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-None-None] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-0.0-box0] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-0.0-box1] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-0.0-None] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-None-box0] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-None-box1] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-None-None] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-0.0-box0] PASSED [ 47%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-None-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-0.0-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-0.0-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-0.0-None] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-None-box0] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-None-box1] PASSED [ 48%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-None-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-None-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-0.0-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-0.0-box1] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-0.0-None] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-None-box0] PASSED [ 49%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-None-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-None-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-0.0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-0.0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-0.0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-None-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-None-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-None-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-0.0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-0.0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-0.0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-None-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-None-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-None-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-0.0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-0.0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-0.0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-None-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-None-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-None-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-0.0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-0.0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-0.0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-None-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-None-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-None-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-0.0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-0.0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-0.0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-None-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-None-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-None-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-0.0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-0.0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-0.0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-None-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-None-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-None-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-0.0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-0.0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-0.0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-None-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-None-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-None-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-0.0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-0.0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-0.0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-None-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-None-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-None-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords1-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords1-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords2-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords2-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords3-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords3-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords1-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords1-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords2-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords2-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords3-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords3-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords1-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords1-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords1-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords2-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords2-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords2-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords3-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords3-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords3-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords4-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords4-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords4-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords5-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords5-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords5-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords6-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords6-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords6-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords1-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords1-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords1-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords2-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords2-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords2-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords3-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords3-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords3-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords4-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords4-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords4-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords5-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords5-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords5-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords6-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords6-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords6-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords1-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords1-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords1-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords2-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords2-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords2-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords3-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords3-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords3-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords4-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords4-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords4-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords5-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords5-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords5-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords6-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords6-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords6-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords7-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords7-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords7-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords8-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords8-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords8-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords9-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords9-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords9-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords10-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords10-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords10-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords0-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords0-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords0-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords1-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords1-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords1-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords2-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords2-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords2-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords3-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords3-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords3-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords4-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords4-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords4-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords5-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords5-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords5-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords6-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords6-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords6-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords7-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords7-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords7-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords8-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords8-box1] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords8-None] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords9-box0] PASSED [ 50%] 2083s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords9-box1] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords9-None] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords10-box0] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords10-box1] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords10-None] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords0-box0] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords0-box1] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords0-None] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords1-box0] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords1-box1] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords1-None] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords2-box0] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords2-box1] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords2-None] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords3-box0] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords3-box1] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords3-None] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords4-box0] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords4-box1] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords4-None] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords5-box0] PASSED [ 50%] 2084s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords5-box1] PASSED [ 50%] 2084s 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testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift74-box0] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift74-box1] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift75-box0] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift75-box1] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift76-box0] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift76-box1] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift77-box0] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift77-box1] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift78-box0] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift78-box1] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift79-box0] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift79-box1] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift80-box0] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift80-box1] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift81-box0] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift81-box1] PASSED [ 53%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift82-box0] PASSED [ 53%] 2085s 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testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift123-box1] PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift124-box0] PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift124-box1] PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_log.py::TestProgressBar::test_output PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_log.py::TestProgressBar::test_disable PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_log.py::TestProgressBar::test_verbose_disable PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_neighborsearch.py::test_search PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_neighborsearch.py::test_zero PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box0] PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box1] PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box2] PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box3] PASSED [ 54%] 2085s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box4] PASSED [ 54%] 2086s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_badcutoff[-4-Cutoff must be positive] PASSED [ 54%] 2086s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_badcutoff[100000-Cutoff 100000 too large for box] PASSED [ 54%] 2087s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_ns_grid_noneighbor PASSED [ 54%] 2087s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_PBC_rect PASSED [ 54%] 2087s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_PBC PASSED [ 54%] 2088s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_pairs PASSED [ 54%] 2088s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_pair_distances PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_distances PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_search[None-results0] PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_search[box1-results1] PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_search[box2-results2] PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[None-21] PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[box1-21] PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[box2-26] PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[box3-33] PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_probe_close_to_box_boundary PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_zero_max_dist PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_around_res PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_around_overlapping PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2229_part1 PASSED [ 54%] 2089s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2229_part2 PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2919 PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2345 PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2670 PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_3183 SKIPPED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_setcoords[None-1.0-Donot provide cutoff distance for non PBC aware calculations] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_setcoords[b1-None-Provide a cutoff distance with tree.set_coords(...)] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchfail PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_search[b0-q0-result0] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_search[b1-q1-result1] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_search[b2-q2-result2] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_nopbc PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b0-2.0-result0] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b1-2.0-result1] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b2-4.5-Set cutoff greater or equal to the radius.] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b3-0.1-result3] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_ckd_searchpairs_nopbc[0.1-result0] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_ckd_searchpairs_nopbc[0.3-result1] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b0-q0-result0] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b1-q1-result1] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b2-q2-result2] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b3-q3-result3] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_dummy[float64] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_dummy[float32] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_regression[float64] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_regression[float32] PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_util.py::test_absence_cutil PASSED [ 54%] 2090s testsuite/MDAnalysisTests/lib/test_util.py::test_presence_cutil PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[LYS300:HZ1-residue0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[K300:HZ1-residue1] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[K300-residue2] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[LYS 300:HZ1-residue3] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[M1:CA-residue4] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue_ValueError PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIS-H] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HISA-H] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HISB-H] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HSE-H] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HSD-H] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIS1-H] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIS2-H] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIE-H] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HID-H] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[LYS-K] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[LYSH-K] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[LYN-K] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ALA-A] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASP-D] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASPH-D] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASH-D] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLU-E] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLUH-E] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLH-E] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASN-N] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLN-Q] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYS-C] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYSH-C] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYS1-C] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYS2-C] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[H-strings0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[K-strings1] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[A-strings2] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[D-strings3] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[E-strings4] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[N-strings5] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[Q-strings6] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[C-strings7] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_ValueError[XYZXYZ] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_ValueError[\xa3] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::test_greedy_splitext PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable0-True] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable1-True] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable2-True] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable3-True] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable4-True] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[iterable5-True] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[123-False] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[byte string-False] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::test_iterable[unicode string-False] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo.psf-None-False-foo.psf] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo.psf-pdb-False-foo.pdb] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo.psf-pdb-True-foo.psf] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo-pdb-False-foo.pdb] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo-pdb-True-foo.pdb] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_named_stream PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis0-y_axis0-1.5707963267948966] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis1-y_axis1-1.0471975511965976] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis2-y_axis2-1.5707963267948966] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis3-y_axis3-1.5707963267948966] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis4-y_axis4-1.0471975511965976] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis5-y_axis5-nan] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis6-y_axis6-0.0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_pi[x_axis0-y_axis0-3.141592653589793] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_pi[x_axis1-y_axis1-0.0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.16534698176788384] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.3306939635357677] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.4960409453036515] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.6613879270715354] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.8267349088394192] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.992081890607303] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.1574288723751869] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.3227758541430708] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.4881228359109546] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.6534698176788385] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.8188167994467224] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.984163781214606] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.14951076298249] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.3148577447503738] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.4802047265182576] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.6455517082861415] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.8108986900540254] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.9762456718219092] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[3.141592653589793] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm[vector0-1] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm[vector1-1.0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm[vector2-0.0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.16534698176788384] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.3306939635357677] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.4960409453036515] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.6613879270715354] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.8267349088394192] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.992081890607303] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.1574288723751869] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.3227758541430708] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.4881228359109546] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.6534698176788385] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.8188167994467224] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.984163781214606] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.14951076298249] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.3148577447503738] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.4802047265182576] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.6455517082861415] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.8108986900540254] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.9762456718219092] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[3.141592653589793] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_normal[vec10-vec20-value0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_normal[vec11-vec21-0.0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_lower_clip PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_stp PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_dihedral PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_pdot PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_pnorm PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths0] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths1] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths2] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths3] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths4] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths5] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths6] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths7] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths8] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths9] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths10] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths11] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths12] PASSED [ 54%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths13] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths14] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths15] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths16] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths17] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths18] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths19] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths0] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths1] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths2] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths3] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths4] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths5] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths6] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths7] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths8] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths9] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths10] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths11] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths12] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths13] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths14] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths15] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths16] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths17] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths18] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths19] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths0] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths1] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths2] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths3] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths4] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths5] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths6] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths7] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths8] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths9] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths10] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths11] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths12] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths13] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths14] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths15] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths16] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths17] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths18] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths19] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths0] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths1] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths2] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths3] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths4] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths5] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths6] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths7] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths8] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths9] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths10] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths11] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths12] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths13] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths14] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths15] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths16] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths17] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths18] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths19] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths0] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths1] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths2] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths3] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths4] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths5] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths6] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths7] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths8] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths9] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths10] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths11] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths12] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths13] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths14] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths15] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths16] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths17] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths18] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths19] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths0] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths1] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths2] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths3] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths4] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths5] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths6] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths7] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths8] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths9] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths10] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths11] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths12] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths13] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths14] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths15] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths16] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths17] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths18] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths19] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths0] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths1] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths2] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths3] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths4] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths5] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths6] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths7] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths8] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths9] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths10] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths11] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths12] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths13] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths14] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths15] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths16] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths17] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths18] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths19] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths0] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths1] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths2] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths3] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths4] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths5] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths6] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths7] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths8] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths9] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths10] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths11] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths12] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths13] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths14] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths15] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths16] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths17] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths18] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths19] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths0] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths1] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths2] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths3] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths4] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths5] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths6] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths7] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths8] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths9] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths10] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths11] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths12] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths13] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths14] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths15] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths16] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths17] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths18] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths19] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths0] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths1] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths2] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths3] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths4] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths5] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths6] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths7] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths8] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths9] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths10] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths11] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths12] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths13] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths14] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths15] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths16] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths17] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths18] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths19] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths0] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths1] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths2] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths3] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths4] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths5] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths6] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths7] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths8] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths9] PASSED [ 55%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths10] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths11] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths12] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths13] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths14] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths15] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths16] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths17] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths18] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths19] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths0] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths1] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths2] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths3] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths4] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths5] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths6] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths7] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths8] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths9] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths10] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths11] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths12] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths13] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths14] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths15] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths16] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths17] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths18] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths19] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths0] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths1] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths2] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths3] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths4] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths5] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths6] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths7] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths8] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths9] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths10] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths11] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths12] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths13] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths14] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths15] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths16] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths17] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths18] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths19] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths0] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths1] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths2] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths3] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths4] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths5] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths6] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths7] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths8] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths9] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths10] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths11] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths12] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths13] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths14] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths15] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths16] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths17] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths18] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths19] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths0] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths1] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths2] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths3] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths4] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths5] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths6] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths7] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths8] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths9] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths10] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths11] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths12] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths13] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths14] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths15] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths16] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths17] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths18] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths19] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths0] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths1] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths2] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths3] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths4] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths5] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths6] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths7] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths8] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths9] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths10] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths11] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths12] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths13] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths14] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths15] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths16] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths17] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths18] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths19] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths0] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths1] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths2] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths3] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths4] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths5] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths6] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths7] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths8] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths9] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths10] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths11] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths12] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths13] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths14] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths15] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths16] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths17] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths18] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths19] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths0] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths1] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths2] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths3] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths4] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths5] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths6] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths7] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths8] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths9] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths10] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths11] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths12] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths13] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths14] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths15] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths16] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths17] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths18] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths19] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths0] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths1] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths2] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths3] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths4] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths5] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths6] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths7] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths8] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths9] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths10] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths11] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths12] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths13] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths14] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths15] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths16] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths17] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths18] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths19] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths0] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths1] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths2] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths3] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths4] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths5] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths6] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths7] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths8] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths9] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths10] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths11] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths12] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths13] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths14] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths15] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths16] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths17] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths18] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths19] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths0] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths1] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths2] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths3] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths4] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths5] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths6] PASSED [ 56%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths7] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths8] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths9] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths10] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths11] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths12] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths13] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths14] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths15] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths16] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths17] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths18] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths19] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths0] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths1] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths2] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths3] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths4] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths5] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths6] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths7] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths8] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths9] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths10] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths11] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths12] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths13] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths14] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths15] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths16] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths17] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths18] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths19] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths0] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths1] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths2] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths3] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths4] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths5] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths6] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths7] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths8] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths9] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths10] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths11] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths12] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths13] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths14] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths15] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths16] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths17] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths18] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths19] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths0] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths1] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths2] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths3] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths4] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths5] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths6] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths7] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths8] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths9] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths10] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths11] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths12] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths13] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths14] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths15] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths16] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths17] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths18] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths19] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths0] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths1] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths2] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths3] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths4] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths5] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths6] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths7] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths8] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths9] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths10] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths11] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths12] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths13] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths14] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths15] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths16] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths17] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths18] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths19] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths0] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths1] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths2] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths3] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths4] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths5] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths6] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths7] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths8] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths9] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths10] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths11] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths12] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths13] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths14] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths15] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths16] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths17] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths18] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths19] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths0] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths1] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths2] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths3] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths4] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths5] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths6] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths7] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths8] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths9] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths10] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths11] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths12] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths13] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths14] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths15] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths16] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths17] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths18] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths19] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths0] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths1] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths2] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths3] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths4] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths5] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths6] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths7] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths8] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths9] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths10] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths11] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths12] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths13] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths14] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths15] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths16] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths17] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths18] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths19] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths0] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths1] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths2] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths3] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths4] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths5] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths6] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths7] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths8] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths9] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths10] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths11] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths12] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths13] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths14] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths15] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths16] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths17] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths18] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths19] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths0] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths1] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths2] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths3] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths4] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths5] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths6] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths7] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths8] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths9] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths10] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths11] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths12] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths13] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths14] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths15] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths16] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths17] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths18] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths19] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths0] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths1] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths2] PASSED [ 57%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths3] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths4] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths5] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths6] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths7] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths8] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths9] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths10] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths11] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths12] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths13] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths14] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths15] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths16] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths17] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths18] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths19] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths0] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths1] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths2] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths3] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths4] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths5] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths6] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths7] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths8] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths9] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths10] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths11] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths12] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths13] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths14] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths15] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths16] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths17] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths18] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths19] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths0] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths1] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths2] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths3] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths4] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths5] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths6] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths7] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths8] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths9] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths10] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths11] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths12] PASSED [ 58%] 2091s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths13] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths14] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths15] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths16] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths17] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths18] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths19] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths0] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths1] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths2] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths3] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths4] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths5] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths6] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths7] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths8] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths9] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths10] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths11] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths12] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths13] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths14] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths15] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths16] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths17] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths18] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths19] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths0] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths1] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths2] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths3] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths4] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths5] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths6] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths7] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths8] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths9] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths10] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths11] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths12] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths13] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths14] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths15] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths16] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths17] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths18] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths19] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths0] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths1] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths2] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths3] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths4] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths5] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths6] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths7] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths8] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths9] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths10] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths11] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths12] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths13] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths14] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths15] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths16] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths17] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths18] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths19] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths0] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths1] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths2] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths3] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths4] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths5] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths6] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths7] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths8] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths9] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths10] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths11] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths12] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths13] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths14] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths15] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths16] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths17] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths18] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths19] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths0] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths1] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths2] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths3] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths4] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths5] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths6] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths7] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths8] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths9] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths10] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths11] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths12] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths13] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths14] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths15] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths16] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths17] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths18] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths19] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths0] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths1] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths2] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths3] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths4] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths5] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths6] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths7] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths8] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths9] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths10] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths11] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths12] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths13] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths14] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths15] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths16] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths17] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths18] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths19] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths0] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths1] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths2] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths3] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths4] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths5] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths6] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths7] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths8] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths9] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths10] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths11] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths12] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths13] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths14] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths15] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths16] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths17] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths18] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths19] PASSED [ 58%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths0] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths1] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths2] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths3] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths4] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths5] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths6] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths7] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths8] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths9] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths10] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths11] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths12] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths13] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths14] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths15] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths16] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths17] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths18] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths19] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths0] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths1] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths2] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths3] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths4] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths5] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths6] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths7] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths8] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths9] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths10] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths11] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths12] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths13] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths14] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths15] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths16] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths17] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths18] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths19] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths0] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths1] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths2] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths3] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths4] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths5] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths6] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths7] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths8] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths9] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths10] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths11] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths12] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths13] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths14] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths15] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths16] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths17] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths18] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths19] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths0] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths1] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths2] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths3] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths4] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths5] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths6] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths7] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths8] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths9] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths10] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths11] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths12] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths13] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths14] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths15] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths16] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths17] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths18] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths19] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths0] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths1] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths2] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths3] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths4] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths5] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths6] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths7] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths8] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths9] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths10] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths11] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths12] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths13] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths14] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths15] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths16] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths17] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths18] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths19] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths0] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths1] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths2] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths3] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths4] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths5] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths6] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths7] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths8] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths9] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths10] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths11] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths12] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths13] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths14] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths15] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths16] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths17] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths18] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths19] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths0] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths1] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths2] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths3] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths4] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths5] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths6] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths7] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths8] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths9] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths10] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths11] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths12] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths13] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths14] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths15] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths16] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths17] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths18] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths19] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths0] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths1] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths2] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths3] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths4] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths5] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths6] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths7] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths8] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths9] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths10] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths11] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths12] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths13] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths14] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths15] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths16] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths17] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths18] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths19] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths0] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths1] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths2] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths3] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths4] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths5] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths6] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths7] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths8] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths9] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths10] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths11] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths12] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths13] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths14] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths15] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths16] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths17] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths18] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths19] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths0] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths1] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths2] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths3] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths4] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths5] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths6] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths7] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths8] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths9] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths10] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths11] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths12] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths13] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths14] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths15] PASSED [ 59%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths16] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths17] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths18] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths19] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths0] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths1] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths2] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths3] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths4] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths5] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths6] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths7] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths8] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths9] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths10] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths11] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths12] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths13] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths14] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths15] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths16] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths17] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths18] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths19] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths0] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths1] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths2] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths3] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths4] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths5] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths6] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths7] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths8] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths9] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths10] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths11] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths12] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths13] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths14] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths15] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths16] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths17] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths18] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths19] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths0] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths1] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths2] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths3] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths4] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths5] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths6] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths7] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths8] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths9] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths10] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths11] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths12] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths13] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths14] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths15] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths16] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths17] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths18] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths19] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths0] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths1] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths2] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths3] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths4] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths5] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths6] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths7] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths8] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths9] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths10] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths11] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths12] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths13] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths14] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths15] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths16] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths17] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths18] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths19] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths0] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths1] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths2] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths3] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths4] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths5] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths6] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths7] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths8] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths9] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths10] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths11] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths12] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths13] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths14] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths15] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths16] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths17] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths18] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths19] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths0] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths1] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths2] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths3] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths4] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths5] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths6] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths7] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths8] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths9] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths10] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths11] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths12] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths13] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths14] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths15] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths16] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths17] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths18] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths19] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths0] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths1] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths2] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths3] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths4] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths5] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths6] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths7] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths8] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths9] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths10] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths11] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths12] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths13] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths14] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths15] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths16] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths17] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths18] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths19] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths0] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths1] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths2] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths3] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths4] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths5] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths6] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths7] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths8] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths9] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths10] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths11] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths12] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths13] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths14] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths15] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths16] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths17] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths18] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths19] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths0] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths1] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths2] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths3] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths4] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths5] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths6] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths7] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths8] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths9] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths10] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths11] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths12] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths13] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths14] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths15] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths16] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths17] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths18] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths19] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths0] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths1] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths2] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths3] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths4] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths5] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths6] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths7] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths8] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths9] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths10] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths11] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths12] PASSED [ 60%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths13] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths14] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths15] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths16] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths17] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths18] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths19] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths0] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths1] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths2] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths3] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths4] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths5] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths6] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths7] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths8] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths9] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths10] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths11] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths12] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths13] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths14] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths15] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths16] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths17] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths18] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths19] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths0] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths1] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths2] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths3] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths4] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths5] PASSED [ 61%] 2092s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths0] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths1] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths2] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths3] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths4] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths5] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths6] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths7] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths8] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths9] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths10] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths11] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths12] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths13] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths14] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths15] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths16] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths17] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths18] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths19] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths0] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths1] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths2] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths3] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths4] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths5] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths6] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths7] PASSED [ 61%] 2092s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths3] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths4] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths5] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths6] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths7] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths8] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths9] PASSED [ 61%] 2092s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths18] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths19] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths0] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths1] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths2] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths3] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths4] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths5] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths6] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths7] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths8] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths9] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths10] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths11] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths12] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths13] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths14] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths15] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths16] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths17] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths18] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths19] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths0] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths1] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths2] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths3] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths4] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths5] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths6] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths7] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths8] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths9] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths10] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths11] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths12] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths13] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths14] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths15] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths16] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths17] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths18] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths19] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths0] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths1] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths2] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths3] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths4] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths5] PASSED [ 61%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths6] PASSED [ 61%] 2092s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths14] PASSED [ 62%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths15] PASSED [ 62%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths16] PASSED [ 62%] 2092s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths17] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths18] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths19] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths0] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths1] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths2] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths3] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths4] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths5] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths6] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths7] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths8] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths9] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths10] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths11] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths12] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths13] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths14] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths15] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths16] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths17] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths18] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths19] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths0] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths1] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths2] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths3] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths4] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths5] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths6] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths7] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths8] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths9] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths10] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths11] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths12] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths13] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths14] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths15] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths16] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths17] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths18] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths19] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths0] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths1] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths2] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths3] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths4] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths5] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths6] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths7] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths8] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths9] PASSED [ 62%] 2093s 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testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths4] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths5] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths6] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths7] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths8] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths9] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths10] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths11] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths12] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths13] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths14] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths15] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths16] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths17] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths18] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths19] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths0] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths1] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths2] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths3] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths4] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths5] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths6] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths7] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths8] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths9] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths10] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths11] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths12] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths13] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths14] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths15] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths16] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths17] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths18] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths19] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths0] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths1] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths2] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths3] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths4] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths5] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths6] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths7] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths8] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths9] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths10] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths11] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths12] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths13] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths14] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths15] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths16] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths17] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths18] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths19] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths0] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths1] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths2] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths3] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths4] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths5] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths6] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths7] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths8] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths9] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths10] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths11] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths12] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths13] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths14] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths15] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths16] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths17] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths18] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths19] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths0] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths1] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths2] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths3] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths4] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths5] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths6] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths7] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths8] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths9] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths10] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths11] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths12] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths13] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths14] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths15] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths16] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths17] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths18] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths19] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths0] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths1] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths2] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths3] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths4] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths5] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths6] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths7] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths8] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths9] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths10] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths11] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths12] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths13] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths14] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths15] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths16] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths17] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths18] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths19] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths0] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths1] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths2] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths3] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths4] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths5] PASSED [ 62%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths6] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths7] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths8] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths9] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths10] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths11] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths12] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths13] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths14] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths15] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths16] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths17] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths18] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths19] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths0] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths1] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths2] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths3] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths4] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths5] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths6] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths7] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths8] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths9] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths10] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths11] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths12] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths13] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths14] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths15] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths16] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths17] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths18] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths19] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths0] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths1] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths2] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths3] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths4] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths5] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths6] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths7] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths8] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths9] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths10] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths11] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths12] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths13] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths14] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths15] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths16] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths17] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths18] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths19] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths0] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths1] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths2] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths3] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths4] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths5] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths6] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths7] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths8] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths9] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths10] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths11] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths12] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths13] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths14] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths15] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths16] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths17] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths18] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths19] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths0] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths1] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths2] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths3] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths4] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths5] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths6] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths7] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths8] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths9] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths10] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths11] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths12] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths13] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths14] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths15] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths16] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths17] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths18] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths19] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-60-60] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-60-90] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-90-60] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-90-90] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-60-60] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-60-90] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-90-60] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-90-90] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[int] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[float] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[float32] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[float64] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles0] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles1] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles2] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles3] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles4] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles5] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles6] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths0] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths1] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths2] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths3] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths4] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths5] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths6] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths7] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths8] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths9] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths10] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths11] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths12] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths13] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths14] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths15] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths16] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths17] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths18] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths19] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths0] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths1] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths2] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths3] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths4] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths5] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths6] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths7] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths8] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths9] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths10] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths11] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths12] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths13] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths14] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths15] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths16] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths17] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths18] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths19] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths0] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths1] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths2] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths3] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths4] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths5] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths6] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths7] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths8] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths9] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths10] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths11] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths12] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths13] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths14] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths15] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths16] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths17] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths18] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths19] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths0] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths1] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths2] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths3] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths4] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths5] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths6] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths7] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths8] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths9] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths10] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths11] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths12] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths13] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths14] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths15] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths16] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths17] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths18] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths19] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths0] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths1] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths2] PASSED [ 63%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths3] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths4] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths5] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths6] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths7] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths8] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths9] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths10] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths11] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths12] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths13] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths14] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths15] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths16] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths17] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths18] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths19] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths0] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths1] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths2] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths3] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths4] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths5] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths6] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths7] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths8] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths9] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths10] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths11] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths12] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths13] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths14] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths15] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths16] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths17] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths18] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths19] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths0] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths1] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths2] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths3] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths4] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths5] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths6] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths7] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths8] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths9] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths10] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths11] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths12] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths13] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths14] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths15] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths16] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths17] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths18] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths19] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths0] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths1] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths2] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths3] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths4] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths5] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths6] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths7] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths8] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths9] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths10] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths11] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths12] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths13] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths14] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths15] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths16] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths17] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths18] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths19] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths0] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths1] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths2] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths3] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths4] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths5] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths6] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths7] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths8] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths9] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths10] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths11] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths12] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths13] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths14] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths15] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths16] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths17] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths18] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths19] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths0] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths1] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths2] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths3] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths4] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths5] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths6] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths7] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths8] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths9] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths10] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths11] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths12] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths13] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths14] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths15] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths16] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths17] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths18] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths19] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths0] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths1] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths2] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths3] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths4] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths5] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths6] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths7] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths8] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths9] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths10] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths11] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths12] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths13] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths14] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths15] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths16] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths17] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths18] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths19] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths0] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths1] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths2] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths3] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths4] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths5] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths6] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths7] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths8] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths9] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths10] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths11] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths12] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths13] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths14] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths15] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths16] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths17] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths18] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths19] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths0] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths1] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths2] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths3] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths4] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths5] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths6] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths7] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths8] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths9] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths10] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths11] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths12] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths13] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths14] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths15] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths16] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths17] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths18] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths19] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths0] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths1] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths2] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths3] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths4] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths5] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths6] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths7] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths8] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths9] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths10] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths11] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths12] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths13] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths14] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths15] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths16] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths17] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths18] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths19] PASSED [ 64%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths0] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths1] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths2] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths3] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths4] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths5] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths6] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths7] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths8] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths9] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths10] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths11] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths12] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths13] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths14] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths15] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths16] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths17] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths18] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths19] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths0] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths1] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths2] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths3] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths4] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths5] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths6] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths7] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths8] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths9] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths10] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths11] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths12] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths13] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths14] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths15] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths16] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths17] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths18] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths19] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths0] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths1] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths2] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths3] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths4] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths5] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths6] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths7] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths8] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths9] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths10] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths11] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths12] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths13] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths14] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths15] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths16] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths17] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths18] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths19] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths0] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths1] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths2] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths3] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths4] PASSED [ 65%] 2093s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths5] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths6] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths7] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths8] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths9] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths10] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths11] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths12] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths13] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths14] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths15] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths16] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths17] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths18] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths19] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths0] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths1] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths2] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths3] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths4] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths5] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths6] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths7] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths8] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths9] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths10] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths11] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths12] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths13] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths14] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths15] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths16] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths17] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths18] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths19] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths0] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths1] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths2] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths3] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths4] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths5] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths6] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths7] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths8] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths9] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths10] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths11] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths12] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths13] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths14] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths15] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths16] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths17] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths18] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths19] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths0] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths1] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths2] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths3] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths4] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths5] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths6] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths7] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths8] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths9] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths10] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths11] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths12] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths13] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths14] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths15] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths16] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths17] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths18] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths19] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths0] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths1] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths2] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths3] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths4] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths5] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths6] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths7] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths8] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths9] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths10] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths11] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths12] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths13] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths14] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths15] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths16] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths17] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths18] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths19] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths0] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths1] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths2] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths3] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths4] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths5] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths6] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths7] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths8] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths9] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths10] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths11] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths12] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths13] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths14] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths15] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths16] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths17] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths18] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths19] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths0] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths1] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths2] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths3] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths4] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths5] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths6] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths7] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths8] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths9] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths10] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths11] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths12] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths13] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths14] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths15] PASSED [ 65%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths16] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths17] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths18] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths19] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths0] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths1] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths2] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths3] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths4] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths5] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths6] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths7] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths8] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths9] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths10] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths11] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths12] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths13] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths14] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths15] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths16] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths17] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths18] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths19] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths0] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths1] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths2] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths3] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths4] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths5] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths6] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths7] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths8] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths9] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths10] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths11] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths12] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths13] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths14] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths15] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths16] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths17] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths18] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths19] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths0] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths1] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths2] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths3] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths4] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths5] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths6] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths7] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths8] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths9] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths10] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths11] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths12] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths13] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths14] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths15] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths16] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths17] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths18] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths19] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths0] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths1] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths2] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths3] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths4] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths5] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths6] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths7] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths8] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths9] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths10] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths11] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths12] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths13] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths14] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths15] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths16] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths17] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths18] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths19] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths0] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths1] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths2] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths3] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths4] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths5] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths6] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths7] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths8] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths9] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths10] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths11] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths12] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths13] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths14] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths15] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths16] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths17] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths18] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths19] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths0] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths1] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths2] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths3] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths4] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths5] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths6] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths7] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths8] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths9] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths10] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths11] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths12] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths13] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths14] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths15] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths16] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths17] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths18] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths19] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths0] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths1] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths2] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths3] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths4] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths5] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths6] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths7] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths8] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths9] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths10] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths11] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths12] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths13] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths14] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths15] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths16] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths17] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths18] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths19] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths0] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths1] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths2] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths3] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths4] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths5] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths6] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths7] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths8] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths9] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths10] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths11] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths12] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths13] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths14] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths15] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths16] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths17] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths18] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths19] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths0] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths1] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths2] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths3] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths4] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths5] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths6] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths7] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths8] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths9] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths10] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths11] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths12] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths13] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths14] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths15] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths16] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths17] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths18] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths19] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths0] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths1] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths2] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths3] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths4] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths5] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths6] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths7] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths8] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths9] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths10] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths11] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths12] PASSED [ 66%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths13] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths14] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths15] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths16] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths17] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths18] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths19] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths0] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths1] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths2] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths3] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths4] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths5] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths6] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths7] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths8] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths9] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths10] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths11] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths12] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths13] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths14] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths15] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths16] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths17] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths18] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths19] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths0] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths1] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths2] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths3] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths4] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths5] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths6] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths7] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths8] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths9] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths10] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths11] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths12] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths13] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths14] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths15] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths16] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths17] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths18] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths19] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths0] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths1] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths2] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths3] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths4] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths5] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths6] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths7] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths8] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths9] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths10] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths11] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths12] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths13] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths14] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths15] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths16] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths17] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths18] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths19] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths0] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths1] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths2] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths3] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths4] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths5] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths6] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths7] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths8] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths9] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths10] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths11] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths12] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths13] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths14] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths15] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths16] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths17] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths18] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths19] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths0] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths1] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths2] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths3] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths4] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths5] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths6] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths7] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths8] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths9] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths10] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths11] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths12] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths13] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths14] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths15] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths16] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths17] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths18] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths19] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths0] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths1] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths2] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths3] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths4] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths5] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths6] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths7] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths8] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths9] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths10] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths11] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths12] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths13] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths14] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths15] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths16] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths17] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths18] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths19] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths0] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths1] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths2] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths3] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths4] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths5] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths6] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths7] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths8] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths9] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths10] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths11] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths12] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths13] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths14] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths15] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths16] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths17] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths18] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths19] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths0] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths1] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths2] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths3] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths4] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths5] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths6] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths7] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths8] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths9] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths10] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths11] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths12] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths13] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths14] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths15] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths16] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths17] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths18] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths19] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths0] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths1] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths2] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths3] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths4] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths5] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths6] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths7] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths8] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths9] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths10] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths11] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths12] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths13] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths14] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths15] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths16] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths17] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths18] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths19] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths0] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths1] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths2] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths3] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths4] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths5] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths6] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths7] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths8] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths9] PASSED [ 67%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths10] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths11] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths12] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths13] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths14] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths15] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths16] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths17] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths18] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths19] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths0] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths1] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths2] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths3] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths4] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths5] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths6] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths7] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths8] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths9] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths10] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths11] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths12] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths13] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths14] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths15] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths16] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths17] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths18] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths19] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths0] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths1] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths2] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths3] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths4] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths5] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths6] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths7] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths8] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths9] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths10] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths11] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths12] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths13] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths14] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths15] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths16] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths17] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths18] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths19] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths0] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths1] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths2] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths3] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths4] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths5] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths6] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths7] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths8] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths9] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths10] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths11] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths12] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths13] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths14] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths15] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths16] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths17] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths18] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths19] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths0] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths1] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths2] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths3] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths4] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths5] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths6] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths7] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths8] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths9] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths10] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths11] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths12] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths13] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths14] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths15] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths16] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths17] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths18] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths19] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths0] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths1] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths2] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths3] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths4] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths5] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths6] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths7] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths8] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths9] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths10] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths11] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths12] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths13] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths14] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths15] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths16] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths17] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths18] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths19] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths0] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths1] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths2] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths3] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths4] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths5] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths6] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths7] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths8] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths9] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths10] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths11] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths12] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths13] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths14] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths15] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths16] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths17] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths18] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths19] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths0] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths1] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths2] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths3] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths4] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths5] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths6] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths7] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths8] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths9] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths10] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths11] PASSED [ 68%] 2094s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths12] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths13] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths14] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths15] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths16] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths17] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths18] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths19] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths0] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths1] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths2] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths3] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths4] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths5] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths6] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths7] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths8] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths9] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths10] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths11] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths12] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths13] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths14] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths15] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths16] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths17] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths18] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths19] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths0] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths1] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths2] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths3] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths4] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths5] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths6] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths7] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths8] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths9] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths10] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths11] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths12] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths13] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths14] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths15] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths16] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths17] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths18] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths19] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths0] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths1] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths2] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths3] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths4] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths5] PASSED [ 68%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths6] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths7] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths8] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths9] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths10] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths11] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths12] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths13] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths14] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths15] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths16] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths17] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths18] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths19] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths0] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths1] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths2] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths3] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths4] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths5] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths6] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths7] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths8] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths9] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths10] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths11] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths12] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths13] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths14] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths15] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths16] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths17] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths18] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths19] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths0] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths1] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths2] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths3] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths4] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths5] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths6] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths7] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths8] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths9] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths10] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths11] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths12] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths13] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths14] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths15] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths16] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths17] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths18] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths19] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths0] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths1] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths2] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths3] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths4] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths5] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths6] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths7] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths8] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths9] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths10] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths11] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths12] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths13] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths14] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths15] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths16] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths17] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths18] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths19] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths0] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths1] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths2] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths3] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths4] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths5] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths6] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths7] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths8] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths9] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths10] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths11] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths12] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths13] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths14] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths15] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths16] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths17] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths18] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths19] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths0] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths1] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths2] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths3] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths4] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths5] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths6] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths7] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths8] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths9] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths10] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths11] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths12] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths13] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths14] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths15] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths16] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths17] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths18] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths19] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths0] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths1] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths2] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths3] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths4] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths5] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths6] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths7] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths8] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths9] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths10] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths11] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths12] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths13] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths14] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths15] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths16] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths17] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths18] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths19] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths0] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths1] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths2] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths3] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths4] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths5] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths6] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths7] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths8] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths9] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths10] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths11] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths12] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths13] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths14] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths15] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths16] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths17] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths18] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths19] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths0] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths1] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths2] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths3] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths4] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths5] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths6] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths7] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths8] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths9] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths10] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths11] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths12] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths13] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths14] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths15] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths16] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths17] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths18] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths19] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths0] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths1] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths2] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths3] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths4] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths5] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths6] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths7] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths8] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths9] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths10] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths11] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths12] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths13] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths14] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths15] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths16] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths17] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths18] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths19] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths0] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths1] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths2] PASSED [ 69%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths3] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths4] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths5] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths6] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths7] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths8] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths9] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths10] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths11] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths12] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths13] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths14] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths15] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths16] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths17] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths18] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths19] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths0] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths1] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths2] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths3] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths4] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths5] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths6] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths7] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths8] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths9] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths10] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths11] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths12] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths13] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths14] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths15] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths16] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths17] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths18] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths19] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths0] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths1] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths2] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths3] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths4] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths5] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths6] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths7] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths8] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths9] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths10] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths11] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths12] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths13] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths14] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths15] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths16] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths17] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths18] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths19] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths0] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths1] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths2] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths3] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths4] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths5] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths6] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths7] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths8] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths9] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths10] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths11] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths12] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths13] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths14] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths15] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths16] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths17] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths18] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths19] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths0] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths1] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths2] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths3] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths4] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths5] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths6] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths7] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths8] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths9] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths10] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths11] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths12] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths13] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths14] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths15] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths16] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths17] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths18] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths19] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths0] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths1] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths2] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths3] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths4] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths5] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths6] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths7] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths8] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths9] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths10] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths11] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths12] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths13] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths14] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths15] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths16] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths17] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths18] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths19] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths0] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths1] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths2] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths3] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths4] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths5] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths6] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths7] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths8] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths9] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths10] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths11] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths12] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths13] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths14] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths15] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths16] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths17] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths18] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths19] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths0] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths1] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths2] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths3] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths4] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths5] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths6] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths7] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths8] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths9] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths10] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths11] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths12] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths13] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths14] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths15] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths16] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths17] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths18] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths19] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths0] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths1] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths2] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths3] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths4] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths5] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths6] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths7] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths8] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths9] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths10] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths11] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths12] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths13] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths14] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths15] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths16] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths17] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths18] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths19] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths0] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths1] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths2] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths3] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths4] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths5] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths6] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths7] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths8] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths9] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths10] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths11] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths12] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths13] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths14] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths15] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths16] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths17] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths18] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths19] PASSED [ 70%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths0] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths1] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths2] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths3] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths4] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths5] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths6] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths7] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths8] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths9] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths10] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths11] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths12] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths13] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths14] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths15] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths16] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths17] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths18] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths19] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths0] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths1] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths2] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths3] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths4] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths5] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths6] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths7] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths8] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths9] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths10] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths11] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths12] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths13] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths14] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths15] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths16] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths17] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths18] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths19] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths0] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths1] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths2] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths3] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths4] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths5] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths6] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths7] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths8] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths9] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths10] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths11] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths12] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths13] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths14] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths15] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths16] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths17] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths18] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths19] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths0] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths1] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths2] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths3] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths4] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths5] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths6] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths7] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths8] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths9] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths10] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths11] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths12] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths13] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths14] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths15] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths16] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths17] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths18] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths19] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths0] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths1] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths2] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths3] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths4] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths5] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths6] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths7] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths8] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths9] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths10] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths11] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths12] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths13] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths14] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths15] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths16] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths17] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths18] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths19] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths0] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths1] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths2] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths3] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths4] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths5] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths6] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths7] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths8] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths9] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths10] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths11] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths12] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths13] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths14] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths15] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths16] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths17] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths18] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths19] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths0] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths1] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths2] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths3] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths4] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths5] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths6] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths7] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths8] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths9] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths10] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths11] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths12] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths13] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths14] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths15] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths16] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths17] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths18] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths19] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths0] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths1] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths2] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths3] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths4] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths5] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths6] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths7] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths8] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths9] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths10] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths11] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths12] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths13] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths14] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths15] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths16] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths17] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths18] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths19] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths0] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths1] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths2] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths3] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths4] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths5] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths6] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths7] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths8] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths9] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths10] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths11] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths12] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths13] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths14] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths15] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths16] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths17] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths18] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths19] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths0] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths1] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths2] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths3] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths4] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths5] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths6] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths7] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths8] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths9] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths10] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths11] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths12] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths13] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths14] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths15] PASSED [ 71%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths16] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths17] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths18] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths19] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths0] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths1] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths2] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths3] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths4] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths5] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths6] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths7] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths8] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths9] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths10] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths11] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths12] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths13] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths14] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths15] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths16] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths17] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths18] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths19] PASSED [ 72%] 2095s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths0] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths1] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths2] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths3] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths4] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths5] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths6] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths7] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths8] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths9] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths10] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths11] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths12] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths13] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths14] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths15] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths16] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths17] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths18] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths19] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths0] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths1] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths2] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths3] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths4] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths5] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths6] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths7] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths8] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths9] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths10] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths11] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths12] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths13] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths14] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths15] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths16] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths17] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths18] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths19] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths0] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths1] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths2] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths3] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths4] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths5] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths6] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths7] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths8] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths9] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths10] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths11] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths12] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths13] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths14] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths15] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths16] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths17] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths18] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths19] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths0] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths1] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths2] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths3] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths4] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths5] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths6] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths7] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths8] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths9] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths10] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths11] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths12] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths13] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths14] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths15] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths16] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths17] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths18] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths19] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths0] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths1] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths2] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths3] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths4] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths5] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths6] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths7] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths8] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths9] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths10] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths11] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths12] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths13] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths14] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths15] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths16] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths17] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths18] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths19] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths0] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths1] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths2] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths3] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths4] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths5] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths6] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths7] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths8] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths9] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths10] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths11] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths12] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths13] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths14] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths15] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths16] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths17] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths18] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths19] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths0] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths1] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths2] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths3] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths4] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths5] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths6] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths7] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths8] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths9] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths10] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths11] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths12] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths13] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths14] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths15] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths16] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths17] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths18] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths19] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths0] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths1] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths2] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths3] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths4] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths5] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths6] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths7] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths8] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths9] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths10] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths11] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths12] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths13] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths14] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths15] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths16] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths17] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths18] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths19] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths0] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths1] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths2] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths3] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths4] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths5] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths6] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths7] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths8] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths9] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths10] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths11] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths12] PASSED [ 72%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths13] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths14] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths15] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths16] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths17] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths18] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths19] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths0] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths1] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths2] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths3] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths4] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths5] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths6] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths7] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths8] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths9] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths10] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths11] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths12] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths13] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths14] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths15] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths16] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths17] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths18] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths19] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths0] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths1] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths2] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths3] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths4] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths5] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths6] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths7] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths8] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths9] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths10] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths11] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths12] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths13] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths14] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths15] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths16] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths17] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths18] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths19] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths0] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths1] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths2] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths3] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths4] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths5] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths6] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths7] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths8] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths9] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths10] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths11] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths12] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths13] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths14] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths15] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths16] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths17] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths18] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths19] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths0] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths1] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths2] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths3] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths4] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths5] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths6] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths7] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths8] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths9] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths10] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths11] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths12] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths13] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths14] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths15] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths16] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths17] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths18] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths19] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths0] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths1] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths2] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths3] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths4] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths5] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths6] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths7] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths8] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths9] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths10] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths11] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths12] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths13] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths14] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths15] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths16] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths17] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths18] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths19] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths0] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths1] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths2] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths3] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths4] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths5] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths6] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths7] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths8] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths9] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths10] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths11] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths12] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths13] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths14] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths15] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths16] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths17] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths18] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths19] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths0] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths1] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths2] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths3] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths4] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths5] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths6] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths7] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths8] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths9] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths10] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths11] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths12] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths13] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths14] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths15] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths16] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths17] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths18] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths19] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths0] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths1] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths2] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths3] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths4] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths5] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths6] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths7] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths8] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths9] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths10] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths11] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths12] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths13] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths14] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths15] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths16] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths17] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths18] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths19] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths0] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths1] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths2] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths3] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths4] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths5] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths6] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths7] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths8] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths9] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths10] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths11] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths12] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths13] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths14] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths15] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths16] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths17] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths18] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths19] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths0] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths1] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths2] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths3] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths4] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths5] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths6] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths7] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths8] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths9] PASSED [ 73%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths10] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths11] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths12] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths13] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths14] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths15] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths16] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths17] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths18] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths19] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths0] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths1] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths2] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths3] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths4] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths5] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths6] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths7] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths8] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths9] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths10] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths11] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths12] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths13] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths14] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths15] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths16] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths17] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths18] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths19] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths0] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths1] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths2] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths3] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths4] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths5] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths6] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths7] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths8] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths9] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths10] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths11] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths12] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths13] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths14] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths15] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths16] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths17] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths18] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths19] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths0] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths1] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths2] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths3] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths4] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths5] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths6] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths7] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths8] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths9] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths10] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths11] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths12] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths13] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths14] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths15] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths16] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths17] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths18] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths19] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths0] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths1] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths2] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths3] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths4] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths5] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths6] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths7] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths8] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths9] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths10] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths11] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths12] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths13] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths14] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths15] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths16] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths17] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths18] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths19] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths0] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths1] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths2] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths3] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths4] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths5] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths6] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths7] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths8] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths9] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths10] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths11] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths12] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths13] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths14] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths15] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths16] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths17] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths18] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths19] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths0] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths1] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths2] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths3] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths4] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths5] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths6] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths7] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths8] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths9] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths10] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths11] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths12] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths13] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths14] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths15] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths16] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths17] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths18] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths19] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths0] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths1] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths2] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths3] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths4] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths5] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths6] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths7] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths8] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths9] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths10] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths11] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths12] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths13] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths14] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths15] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths16] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths17] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths18] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths19] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths0] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths1] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths2] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths3] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths4] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths5] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths6] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths7] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths8] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths9] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths10] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths11] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths12] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths13] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths14] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths15] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths16] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths17] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths18] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths19] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths0] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths1] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths2] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths3] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths4] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths5] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths6] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths7] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths8] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths9] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths10] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths11] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths12] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths13] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths14] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths15] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths16] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths17] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths18] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths19] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths0] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths1] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths2] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths3] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths4] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths5] PASSED [ 74%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths6] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths7] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths8] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths9] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths10] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths11] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths12] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths13] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths14] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths15] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths16] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths17] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths18] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths19] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths0] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths1] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths2] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths3] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths4] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths5] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths6] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths7] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths8] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths9] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths10] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths11] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths12] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths13] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths14] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths15] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths16] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths17] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths18] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths19] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths0] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths1] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths2] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths3] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths4] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths5] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths6] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths7] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths8] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths9] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths10] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths11] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths12] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths13] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths14] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths15] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths16] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths17] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths18] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths19] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths0] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths1] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths2] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths3] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths4] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths5] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths6] PASSED [ 75%] 2096s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths7] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths8] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths9] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths10] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths11] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths12] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths13] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths14] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths15] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths16] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths17] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths18] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths19] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths0] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths1] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths2] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths3] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths4] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths5] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths6] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths7] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths8] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths9] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths10] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths11] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths12] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths13] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths14] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths15] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths16] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths17] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths18] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths19] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths0] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths1] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths2] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths3] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths4] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths5] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths6] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths7] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths8] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths9] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths10] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths11] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths12] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths13] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths14] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths15] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths16] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths17] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths18] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths19] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths0] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths1] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths2] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths3] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths4] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths5] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths6] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths7] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths8] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths9] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths10] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths11] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths12] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths13] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths14] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths15] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths16] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths17] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths18] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths19] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths0] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths1] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths2] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths3] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths4] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths5] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths6] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths7] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths8] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths9] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths10] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths11] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths12] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths13] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths14] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths15] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths16] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths17] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths18] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths19] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths0] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths1] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths2] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths3] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths4] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths5] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths6] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths7] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths8] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths9] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths10] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths11] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths12] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths13] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths14] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths15] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths16] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths17] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths18] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths19] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths0] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths1] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths2] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths3] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths4] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths5] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths6] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths7] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths8] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths9] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths10] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths11] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths12] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths13] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths14] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths15] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths16] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths17] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths18] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths19] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths0] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths1] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths2] PASSED [ 75%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths3] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths4] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths5] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths6] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths7] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths8] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths9] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths10] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths11] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths12] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths13] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths14] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths15] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths16] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths17] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths18] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths19] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths0] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths1] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths2] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths3] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths4] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths5] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths6] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths7] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths8] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths9] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths10] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths11] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths12] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths13] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths14] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths15] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths16] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths17] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths18] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths19] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths0] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths1] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths2] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths3] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths4] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths5] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths6] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths7] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths8] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths9] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths10] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths11] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths12] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths13] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths14] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths15] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths16] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths17] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths18] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths19] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths0] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths1] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths2] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths3] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths4] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths5] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths6] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths7] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths8] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths9] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths10] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths11] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths12] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths13] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths14] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths15] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths16] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths17] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths18] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths19] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths0] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths1] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths2] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths3] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths4] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths5] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths6] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths7] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths8] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths9] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths10] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths11] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths12] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths13] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths14] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths15] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths16] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths17] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths18] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths19] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths0] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths1] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths2] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths3] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths4] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths5] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths6] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths7] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths8] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths9] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths10] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths11] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths12] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths13] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths14] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths15] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths16] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths17] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths18] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths19] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths0] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths1] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths2] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths3] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths4] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths5] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths6] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths7] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths8] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths9] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths10] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths11] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths12] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths13] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths14] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths15] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths16] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths17] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths18] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths19] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths0] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths1] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths2] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths3] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths4] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths5] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths6] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths7] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths8] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths9] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths10] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths11] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths12] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths13] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths14] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths15] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths16] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths17] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths18] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths19] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths0] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths1] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths2] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths3] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths4] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths5] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths6] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths7] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths8] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths9] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths10] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths11] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths12] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths13] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths14] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths15] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths16] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths17] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths18] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths19] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths0] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths1] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths2] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths3] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths4] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths5] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths6] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths7] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths8] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths9] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths10] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths11] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths12] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths13] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths14] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths15] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths16] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths17] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths18] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths19] PASSED [ 76%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths0] PASSED [ 77%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths1] PASSED [ 77%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths2] PASSED [ 77%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths3] PASSED [ 77%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths4] PASSED [ 77%] 2097s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths5] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths6] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths7] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths8] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths9] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths10] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths11] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths12] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths13] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths14] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths15] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths16] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths17] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths18] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths19] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths0] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths1] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths2] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths3] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths4] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths5] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths6] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths7] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths8] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths9] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths10] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths11] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths12] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths13] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths14] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths15] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths16] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths17] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths18] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths19] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths0] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths1] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths2] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths3] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths4] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths5] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths6] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths7] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths8] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths9] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths10] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths11] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths12] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths13] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths14] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths15] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths16] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths17] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths18] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths19] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths0] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths1] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths2] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths3] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths4] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths5] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths6] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths7] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths8] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths9] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths10] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths11] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths12] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths13] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths14] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths15] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths16] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths17] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths18] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths19] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths0] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths1] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths2] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths3] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths4] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths5] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths6] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths7] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths8] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths9] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths10] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths11] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths12] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths13] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths14] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths15] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths16] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths17] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths18] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths19] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths0] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths1] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths2] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths3] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths4] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths5] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths6] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths7] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths8] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths9] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths10] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths11] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths12] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths13] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths14] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths15] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths16] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths17] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths18] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths19] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths0] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths1] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths2] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths3] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths4] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths5] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths6] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths7] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths8] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths9] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths10] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths11] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths12] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths13] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths14] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths15] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths16] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths17] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths18] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths19] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths0] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths1] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths2] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths3] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths4] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths5] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths6] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths7] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths8] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths9] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths10] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths11] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths12] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths13] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths14] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths15] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths16] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths17] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths18] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths19] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths0] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths1] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths2] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths3] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths4] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths5] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths6] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths7] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths8] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths9] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths10] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths11] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths12] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths13] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths14] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths15] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths16] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths17] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths18] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths19] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths0] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths1] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths2] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths3] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths4] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths5] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths6] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths7] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths8] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths9] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths10] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths11] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths12] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths13] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths14] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths15] PASSED [ 77%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths16] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths17] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths18] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths19] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths0] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths1] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths2] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths3] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths4] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths5] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths6] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths7] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths8] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths9] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths10] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths11] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths12] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths13] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths14] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths15] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths16] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths17] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths18] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths19] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths0] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths1] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths2] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths3] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths4] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths5] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths6] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths7] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths8] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths9] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths10] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths11] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths12] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths13] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths14] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths15] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths16] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths17] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths18] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths19] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths0] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths1] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths2] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths3] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths4] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths5] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths6] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths7] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths8] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths9] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths10] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths11] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths12] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths13] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths14] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths15] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths16] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths17] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths18] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths19] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths0] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths1] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths2] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths3] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths4] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths5] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths6] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths7] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths8] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths9] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths10] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths11] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths12] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths13] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths14] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths15] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths16] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths17] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths18] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths19] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths0] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths1] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths2] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths3] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths4] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths5] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths6] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths7] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths8] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths9] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths10] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths11] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths12] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths13] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths14] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths15] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths16] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths17] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths18] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths19] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths0] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths1] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths2] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths3] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths4] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths5] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths6] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths7] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths8] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths9] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths10] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths11] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths12] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths13] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths14] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths15] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths16] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths17] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths18] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths19] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths0] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths1] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths2] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths3] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths4] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths5] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths6] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths7] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths8] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths9] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths10] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths11] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths12] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths13] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths14] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths15] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths16] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths17] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths18] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths19] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths0] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths1] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths2] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths3] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths4] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths5] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths6] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths7] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths8] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths9] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths10] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths11] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths12] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths13] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths14] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths15] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths16] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths17] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths18] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths19] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths0] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths1] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths2] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths3] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths4] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths5] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths6] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths7] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths8] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths9] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths10] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths11] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths12] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths13] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths14] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths15] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths16] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths17] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths18] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths19] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths0] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths1] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths2] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths3] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths4] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths5] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths6] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths7] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths8] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths9] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths10] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths11] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths12] PASSED [ 78%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths13] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths14] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths15] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths16] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths17] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths18] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths19] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths0] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths1] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths2] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths3] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths4] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths5] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths6] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths7] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths8] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths9] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths10] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths11] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths12] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths13] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths14] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths15] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths16] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths17] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths18] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths19] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths0] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths1] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths2] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths3] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths4] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths5] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths6] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths7] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths8] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths9] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths10] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths11] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths12] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths13] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths14] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths15] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths16] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths17] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths18] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths19] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths0] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths1] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths2] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths3] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths4] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths5] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths6] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths7] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths8] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths9] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths10] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths11] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths12] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths13] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths14] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths15] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths16] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths17] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths18] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths19] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths0] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths1] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths2] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths3] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths4] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths5] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths6] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths7] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths8] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths9] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths10] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths11] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths12] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths13] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths14] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths15] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths16] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths17] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths18] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths19] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths0] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths1] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths2] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths3] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths4] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths5] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths6] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths7] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths8] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths9] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths10] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths11] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths12] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths13] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths14] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths15] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths16] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths17] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths18] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths19] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths0] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths1] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths2] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths3] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths4] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths5] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths6] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths7] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths8] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths9] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths10] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths11] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths12] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths13] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths14] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths15] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths16] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths17] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths18] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths19] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths0] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths1] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths2] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths3] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths4] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths5] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths6] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths7] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths8] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths9] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths10] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths11] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths12] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths13] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths14] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths15] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths16] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths17] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths18] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths19] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths0] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths1] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths2] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths3] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths4] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths5] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths6] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths7] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths8] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths9] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths10] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths11] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths12] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths13] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths14] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths15] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths16] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths17] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths18] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths19] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths0] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths1] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths2] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths3] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths4] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths5] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths6] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths7] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths8] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths9] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths10] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths11] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths12] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths13] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths14] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths15] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths16] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths17] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths18] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths19] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths0] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths1] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths2] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths3] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths4] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths5] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths6] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths7] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths8] PASSED [ 79%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths9] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths10] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths11] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths12] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths13] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths14] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths15] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths16] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths17] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths18] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths19] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths0] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths1] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths2] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths3] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths4] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths5] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths6] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths7] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths8] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths9] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths10] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths11] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths12] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths13] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths14] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths15] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths16] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths17] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths18] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths19] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths0] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths1] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths2] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths3] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths4] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths5] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths6] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths7] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths8] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths9] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths10] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths11] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths12] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths13] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths14] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths15] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths16] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths17] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths18] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths19] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths0] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths1] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths2] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths3] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths4] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths5] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths6] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths7] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths8] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths9] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths10] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths11] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths12] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths13] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths14] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths15] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths16] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths17] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths18] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths19] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths0] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths1] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths2] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths3] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths4] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths5] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths6] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths7] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths8] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths9] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths10] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths11] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths12] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths13] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths14] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths15] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths16] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths17] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths18] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths19] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths0] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths1] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths2] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths3] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths4] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths5] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths6] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths7] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths8] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths9] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths10] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths11] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths12] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths13] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths14] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths15] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths16] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths17] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths18] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths19] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths0] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths1] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths2] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths3] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths4] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths5] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths6] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths7] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths8] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths9] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths10] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths11] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths12] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths13] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths14] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths15] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths16] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths17] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths18] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths19] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape0] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape1] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape2] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape3] PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_return_value PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_single_atom_no_bonds PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_empty_ag PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_scrambled_ag PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_out_of_place PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_double_precision_box PASSED [ 80%] 2098s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_no_bonds PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_zero_box_size PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_wrong_reference_atom PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_impossible_solve PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_1 PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_2 PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_3 PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_4 PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_double_frag_short_bonds PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_make_whole_triclinic PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_make_whole_fullerene PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_make_whole_multiple_molecules PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val1_lookup PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val1_inject PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val2_lookup PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val2_inject PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val3_set PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val3_del PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val4_args PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val5_kwargs PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val6_universe_validation PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_float[0.45-0.45] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_float[.45-0.45] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_float[a.b-a.b] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_map[input0-output0] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_map[input1-output1] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_keys PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_ValueError PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_usage[0.1-4.0-5.0-10-0.1-4.0-5.0] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_usage[0.4-4.0-5.0-3-0.4-3.9-5.1] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[None-None] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[mass-result1] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[weights2-result2] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[weights3-result3] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[weights4-result4] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[42] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[geometry] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights2] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights3] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights4] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights5] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights6] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[CHAIN] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[CONFIG] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[CRD] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[DATA] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[DCD] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[DMS] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[GMS] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[GRO] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[HISTORY] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[INPCRD] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[LAMMPS] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[MDCRD] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[MMTF] PASSED [ 80%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[MOL2] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[NC] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[NCDF] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PDB] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PDBQT] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PRMTOP] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PQR] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PSF] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[RESTRT] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TOP] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TPR] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TRJ] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TRR] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XML] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XPDB] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XTC] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XYZ] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TRZ] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[chain] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[config] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[crd] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[data] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[dcd] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[dms] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[gms] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[gro] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[history] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[inpcrd] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[lammps] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[mdcrd] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[mmtf] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[mol2] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[nc] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[ncdf] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[pdb] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[pdbqt] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[prmtop] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[pqr] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[psf] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[restrt] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[top] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[tpr] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[trj] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[trr] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xml] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xpdb] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xtc] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xyz] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[trz] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[CHAIN] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[CONFIG] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[CRD] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[DATA] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[DCD] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[DMS] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[GMS] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[GRO] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[HISTORY] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[INPCRD] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[LAMMPS] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[MDCRD] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[MMTF] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[MOL2] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[NC] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[NCDF] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PDB] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PDBQT] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PRMTOP] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PQR] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PSF] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[RESTRT] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TOP] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TPR] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TRJ] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TRR] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XML] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XPDB] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XTC] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XYZ] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TRZ] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[chain] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[config] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[crd] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[data] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[dcd] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[dms] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[gms] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[gro] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[history] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[inpcrd] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[lammps] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[mdcrd] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[mmtf] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[mol2] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[nc] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[ncdf] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[pdb] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[pdbqt] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[prmtop] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[pqr] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[psf] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[restrt] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[top] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[tpr] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[trj] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[trr] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xml] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xpdb] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xtc] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xyz] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[trz] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-CHAIN] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-CONFIG] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-CRD] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-DATA] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-DCD] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-DMS] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-GMS] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-GRO] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-HISTORY] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-INPCRD] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-LAMMPS] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-MDCRD] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-MMTF] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-MOL2] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-NC] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-NCDF] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PDB] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PDBQT] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PRMTOP] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PQR] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PSF] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-RESTRT] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TOP] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TPR] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TRJ] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TRR] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XML] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XPDB] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XTC] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XYZ] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TRZ] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-chain] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-config] PASSED [ 81%] 2099s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-crd] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-data] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-dcd] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-dms] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-gms] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-gro] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-history] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-inpcrd] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-lammps] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-mdcrd] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-mmtf] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-mol2] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-nc] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-ncdf] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-pdb] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-pdbqt] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-prmtop] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-pqr] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-psf] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-restrt] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-top] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-tpr] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-trj] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-trr] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xml] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xpdb] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xtc] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xyz] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-trz] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-CHAIN] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-CONFIG] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-CRD] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-DATA] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-DCD] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-DMS] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-GMS] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-GRO] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-HISTORY] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-INPCRD] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-LAMMPS] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-MDCRD] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-MMTF] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-MOL2] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-NC] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-NCDF] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PDB] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PDBQT] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PRMTOP] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PQR] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PSF] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-RESTRT] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TOP] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TPR] PASSED [ 81%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TRJ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TRR] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XML] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XPDB] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XTC] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XYZ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TRZ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-chain] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-config] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-crd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-data] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-dcd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-dms] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-gms] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-gro] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-history] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-inpcrd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-lammps] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-mdcrd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-mmtf] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-mol2] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-nc] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-ncdf] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-pdb] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-pdbqt] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-prmtop] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-pqr] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-psf] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-restrt] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-top] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-tpr] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-trj] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-trr] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xml] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xpdb] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xtc] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xyz] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-trz] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[CHAIN] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[CONFIG] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[CRD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[DATA] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[DCD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[DMS] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[GMS] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[GRO] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[HISTORY] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[INPCRD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[LAMMPS] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[MDCRD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[MMTF] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[MOL2] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[NC] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[NCDF] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PDB] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PDBQT] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PRMTOP] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PQR] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PSF] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[RESTRT] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TOP] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TPR] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TRJ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TRR] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XML] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XPDB] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XTC] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XYZ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TRZ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[chain] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[config] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[crd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[data] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[dcd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[dms] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[gms] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[gro] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[history] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[inpcrd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[lammps] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[mdcrd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[mmtf] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[mol2] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[nc] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[ncdf] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[pdb] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[pdbqt] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[prmtop] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[pqr] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[psf] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[restrt] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[top] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[tpr] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[trj] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[trr] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xml] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xpdb] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xtc] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xyz] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[trz] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-CHAIN] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-CONFIG] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-CRD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-DATA] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-DCD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-DMS] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-GMS] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-GRO] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-HISTORY] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-INPCRD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-LAMMPS] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-MDCRD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-MMTF] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-MOL2] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-NC] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-NCDF] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PDB] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PDBQT] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PRMTOP] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PQR] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PSF] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-RESTRT] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TOP] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TPR] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TRJ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TRR] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XML] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XPDB] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XTC] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XYZ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TRZ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-chain] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-config] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-crd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-data] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-dcd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-dms] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-gms] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-gro] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-history] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-inpcrd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-lammps] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-mdcrd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-mmtf] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-mol2] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-nc] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-ncdf] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-pdb] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-pdbqt] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-prmtop] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-pqr] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-psf] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-restrt] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-top] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-tpr] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-trj] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-trr] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xml] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xpdb] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xtc] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xyz] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-trz] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-CHAIN] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-CONFIG] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-CRD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-DATA] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-DCD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-DMS] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-GMS] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-GRO] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-HISTORY] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-INPCRD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-LAMMPS] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-MDCRD] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-MMTF] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-MOL2] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-NC] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-NCDF] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PDB] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PDBQT] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PRMTOP] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PQR] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PSF] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-RESTRT] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TOP] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TPR] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TRJ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TRR] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XML] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XPDB] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XTC] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XYZ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TRZ] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-chain] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-config] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-crd] PASSED [ 82%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-data] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-dcd] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-dms] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-gms] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-gro] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-history] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-inpcrd] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-lammps] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-mdcrd] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-mmtf] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-mol2] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-nc] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-ncdf] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-pdb] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-pdbqt] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-prmtop] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-pqr] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-psf] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-restrt] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-top] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-tpr] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-trj] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-trr] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xml] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xpdb] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xtc] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xyz] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-trz] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[CHAIN-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[CONFIG-ConfigParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[CRD-CRDParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[DATA-DATAParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[DCD-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[DMS-DMSParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[GMS-GMSParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[GRO-GROParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[HISTORY-HistoryParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[INPCRD-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[LAMMPS-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[MDCRD-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[MMTF-MMTFParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[MOL2-MOL2Parser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[NC-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[NCDF-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PDB-PDBParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PDBQT-PDBQTParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PRMTOP-TOPParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PQR-PQRParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PSF-PSFParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[RESTRT-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TOP-TOPParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TPR-TPRParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TRJ-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TRR-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XML-HoomdXMLParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XPDB-ExtendedPDBParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XTC-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XYZ-XYZParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TRZ-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-CHAIN-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-CONFIG-ConfigParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-CRD-CRDParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-DATA-DATAParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-DCD-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-DMS-DMSParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-GMS-GMSParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-GRO-GROParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-HISTORY-HistoryParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-INPCRD-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-LAMMPS-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-MDCRD-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-MMTF-MMTFParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-MOL2-MOL2Parser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-NC-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-NCDF-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PDB-PDBParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PDBQT-PDBQTParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PRMTOP-TOPParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PQR-PQRParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PSF-PSFParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-RESTRT-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TOP-TOPParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TPR-TPRParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TRJ-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TRR-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XML-HoomdXMLParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XPDB-ExtendedPDBParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XTC-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XYZ-XYZParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TRZ-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-CHAIN-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-CONFIG-ConfigParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-CRD-CRDParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-DATA-DATAParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-DCD-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-DMS-DMSParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-GMS-GMSParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-GRO-GROParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-HISTORY-HistoryParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-INPCRD-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-LAMMPS-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-MDCRD-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-MMTF-MMTFParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-MOL2-MOL2Parser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-NC-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-NCDF-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PDB-PDBParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PDBQT-PDBQTParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PRMTOP-TOPParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PQR-PQRParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PSF-PSFParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-RESTRT-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TOP-TOPParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TPR-TPRParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TRJ-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TRR-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XML-HoomdXMLParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XPDB-ExtendedPDBParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XTC-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XYZ-XYZParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TRZ-MinimalParser] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_invalid[extention0] SKIPPED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[CHAIN-ChainReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[CONFIG-ConfigReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[CRD-CRDReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[DATA-DATAReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[DCD-DCDReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[DMS-DMSReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[GMS-GMSReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[GRO-GROReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[HISTORY-HistoryReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[INPCRD-INPReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[LAMMPS-DCDReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[MDCRD-TRJReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[MMTF-MMTFReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[MOL2-MOL2Reader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[NC-NCDFReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[NCDF-NCDFReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[PDB-PDBReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[PDBQT-PDBQTReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[PQR-PQRReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[RESTRT-INPReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[TRJ-TRJReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[TRR-TRRReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[XPDB-ExtendedPDBReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[XTC-XTCReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[XYZ-XYZReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[TRZ-TRZReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-CHAIN-ChainReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-CONFIG-ConfigReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-CRD-CRDReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-DATA-DATAReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-DCD-DCDReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-DMS-DMSReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-GMS-GMSReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-GRO-GROReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-HISTORY-HistoryReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-INPCRD-INPReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-LAMMPS-DCDReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-MDCRD-TRJReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-MMTF-MMTFReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-MOL2-MOL2Reader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-NC-NCDFReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-NCDF-NCDFReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-PDB-PDBReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-PDBQT-PDBQTReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-PQR-PQRReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-RESTRT-INPReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-TRJ-TRJReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-TRR-TRRReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-XPDB-ExtendedPDBReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-XTC-XTCReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-XYZ-XYZReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-TRZ-TRZReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-CHAIN-ChainReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-CONFIG-ConfigReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-CRD-CRDReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-DATA-DATAReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-DCD-DCDReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-DMS-DMSReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-GMS-GMSReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-GRO-GROReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-HISTORY-HistoryReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-INPCRD-INPReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-LAMMPS-DCDReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-MDCRD-TRJReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-MMTF-MMTFReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-MOL2-MOL2Reader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-NC-NCDFReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-NCDF-NCDFReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-PDB-PDBReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-PDBQT-PDBQTReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-PQR-PQRReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-RESTRT-INPReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-TRJ-TRJReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-TRR-TRRReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-XPDB-ExtendedPDBReader] PASSED [ 83%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-XTC-XTCReader] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-XYZ-XYZReader] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-TRZ-TRZReader] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention0] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention1] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention2] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention3] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention4] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_check_compressed_format_TypeError PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_format_from_filename_TypeError PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_stream_ValueError PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_from_ndarray PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestUniqueRows::test_unique_rows_2 PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestUniqueRows::test_unique_rows_3 PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestUniqueRows::test_unique_rows_with_view PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_no_filename_argument PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_precedence PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_missing_extension PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_extension_empty_string PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_file_no_extension PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_wrong_format PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_compressed_extension PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_compressed_extension_fail PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_non_string_filename PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_failure PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_nonsense PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[CRD-CRDWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[DATA-DATAWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[DCD-DCDWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[GRO-GROWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[LAMMPS-DCDWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[MOL2-MOL2Writer] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[NCDF-NCDFWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[NULL-NullWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[PDBQT-PDBQTWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[PQR-PQRWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[TRR-TRRWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[XTC-XTCWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[XYZ-XYZWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[TRZ-TRZWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe_fails[format0] SKIPPED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[DCD-DCDWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[LAMMPS-DCDWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[MOL2-MOL2Writer] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[NCDF-NCDFWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[NULL-NullWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[TRR-TRRWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[XTC-XTCWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[XYZ-XYZWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[TRZ-TRZWriter] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[CRD] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[DATA] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[GRO] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[PDBQT] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[PQR] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_get_writer_for_pdb PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_1 PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_2 PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_3 PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_4 PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_ValueError PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::test_group_same_or_consecutive_integers[arr0-answer0] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::test_group_same_or_consecutive_integers[arr1-answer1] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::test_group_same_or_consecutive_integers[arr2-answer2] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getitem PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getitem_KeyError PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_setitem PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_delitem PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_delitem_AttributeError PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_setattr PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getattr PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getattr_AttributeError PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_delattr PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_eq PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_len PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_iter PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a0-4] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a1-34] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a2-234] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a3-1234] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a4-1234] PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestFlattenDict::test_flatten_dict PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestStaticVariables::test_static_variables PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_once_outer PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warned_state_restored_on_failure PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_once_inner PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_multiple_references PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_unnamed PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_fails_for_non_groupmethods PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_filter_duplicate_with_userwarning PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_default_options PASSED [ 84%] 2100s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-True-True] PASSED [ 84%] 2101s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-True-False] PASSED [ 84%] 2101s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-False-True] PASSED [ 84%] 2101s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-False-False] PASSED [ 84%] 2101s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-True-True] PASSED [ 84%] 2101s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-True-False] PASSED [ 84%] 2101s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-False-True] PASSED [ 84%] 2101s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-False-False] PASSED [ 84%] 2101s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-True-True] PASSED [ 84%] 2101s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-True-False] PASSED [ 84%] 2101s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-False-True] PASSED [ 84%] 2102s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-False-False] PASSED [ 84%] 2102s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-True-True] PASSED [ 84%] 2102s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-True-False] PASSED [ 84%] 2102s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-False-True] PASSED [ 84%] 2102s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-False-False] PASSED [ 84%] 2102s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-True-True] PASSED [ 84%] 2102s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-True-False] PASSED [ 84%] 2102s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-False-True] PASSED [ 84%] 2102s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-False-False] PASSED [ 84%] 2103s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-True-True] PASSED [ 84%] 2103s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-True-False] PASSED [ 84%] 2103s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-False-True] PASSED [ 84%] 2103s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-False-False] PASSED [ 84%] 2103s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-True-True] PASSED [ 84%] 2103s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-True-False] PASSED [ 84%] 2103s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-False-True] PASSED [ 84%] 2103s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-False-False] PASSED [ 84%] 2103s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-True-True] PASSED [ 84%] 2103s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-True-False] PASSED [ 84%] 2104s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-False-True] PASSED [ 84%] 2104s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-False-False] PASSED [ 84%] 2104s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-True-True] PASSED [ 84%] 2104s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-True-False] PASSED [ 84%] 2104s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-False-True] PASSED [ 84%] 2104s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-False-False] PASSED [ 84%] 2104s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-True-True] PASSED [ 84%] 2104s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-True-False] PASSED [ 84%] 2104s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-False-True] PASSED [ 84%] 2104s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-False-False] PASSED [ 84%] 2105s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-True-True] PASSED [ 84%] 2105s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-True-False] PASSED [ 84%] 2105s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-False-True] PASSED [ 84%] 2105s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-False-False] PASSED [ 84%] 2105s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-True-True] PASSED [ 84%] 2105s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-True-False] PASSED [ 84%] 2105s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-False-True] PASSED [ 84%] 2105s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-False-False] PASSED [ 84%] 2105s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-True-True] PASSED [ 84%] 2105s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-True-False] PASSED [ 84%] 2106s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-False-True] PASSED [ 84%] 2106s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-False-False] PASSED [ 84%] 2106s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-True-True] PASSED [ 84%] 2106s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-True-False] PASSED [ 84%] 2106s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-False-True] PASSED [ 84%] 2106s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-False-False] PASSED [ 84%] 2106s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-True-True] PASSED [ 84%] 2106s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-True-False] PASSED [ 84%] 2106s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-False-True] PASSED [ 84%] 2106s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-False-False] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-True-True] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-True-False] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-False-True] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-False-False] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup_not_allowed PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup_not_allowed_default PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_enforce_copy PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_allow_single PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_convert_single PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_reduce_result_if_single PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_check_lengths_match PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup_mismatched_lengths PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_invalid_input PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_usage_with_kwargs PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_wrong_func_call PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_wrong_decorator_usage PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-None-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-None-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-Multiverse-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-None-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-None-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-Multiverse-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-None-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-None-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-Multiverse-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-None-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-None-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-Multiverse-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-None-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-None-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-Multiverse-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-None-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-None-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-Multiverse-None] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate_missing_release_ValueError PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_set_function_name PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[one line text] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[ one line with leading space] PASSED [ 84%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[multiline\n\n with some\n leading space] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[ multiline\n\n with all\n leading space] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box0] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box1] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box2] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box3] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box4] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box5] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box6] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box7] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_None PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box0] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box1] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box2] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box3] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box4] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box5] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box6] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box7] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_wrong_data PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_wrong_shape PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestStoreInitArguments::test_store_arguments_default PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::TestStoreInitArguments::test_store_arguments_withkwargs PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_which PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_is_installed[math-True] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_is_installed[sys-True] PASSED [ 85%] 2107s testsuite/MDAnalysisTests/lib/test_util.py::test_is_installed[some_weird_module_name-False] PASSED [ 85%] 2108s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u0] PASSED [ 85%] 2109s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u1] PASSED [ 85%] 2109s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u2] PASSED [ 85%] 2109s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u3] PASSED [ 85%] 2109s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u4] PASSED [ 85%] 2110s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u5] PASSED [ 85%] 2110s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u6] PASSED [ 85%] 2110s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u7] PASSED [ 85%] 2110s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u8] PASSED [ 85%] 2110s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u9] PASSED [ 85%] 2114s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u10] PASSED [ 85%] 2119s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u11] PASSED [ 85%] 2120s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u12] PASSED [ 85%] 2120s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u13] PASSED [ 85%] 2120s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u14] PASSED [ 85%] 2121s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_universe_unpickle_in_new_process PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_creating_multiple_universe_without_offset PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader0] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader1] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader2] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader3] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader4] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader5] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader6] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader7] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader8] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader9] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader10] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader11] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader12] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader13] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader14] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader15] PASSED [ 85%] 2122s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader16] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader17] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader18] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader19] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader20] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader21] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader22] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader23] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader24] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader25] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader26] PASSED [ 85%] 2123s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader27] PASSED [ 85%] 2125s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader28] PASSED [ 85%] 2128s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader29] PASSED [ 85%] 2128s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader30] PASSED [ 85%] 2129s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_analysis_pickle PASSED [ 85%] 2129s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_fit_translation_pickle[u0] PASSED [ 85%] 2129s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_fit_rot_trans_pickle[u0] PASSED [ 85%] 2129s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_PositionAverager_pickle[u0] PASSED [ 85%] 2129s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_rotateby_pickle[u0] PASSED [ 85%] 2129s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_translate_pickle[u0] PASSED [ 85%] 2129s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_center_in_box_pickle[u0] PASSED [ 85%] 2129s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_wrap_pickle[u0] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_unwrap_pickle[u0] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_Universe PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_Writer PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_AtomGroup PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_ResidueGroup PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_SegmentGroup PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.data] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.dssp] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.encore] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.encore.clustering] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.encore.dimensionality_reduction] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.hbonds] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.hydrogenbonds] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.legacy] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.auxiliary] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.converters] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.coordinates] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.core] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.guesser] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.formats] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.formats.include] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.formats.src] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.include] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.libmdanalysis] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.src.transformations] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.selections] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.tests] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.topology] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.topology.tpr] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.transformations] PASSED [ 85%] 2130s testsuite/MDAnalysisTests/test_api.py::test_all_import[.visualization] PASSED [ 85%] 2131s testsuite/MDAnalysisTests/topology/test_altloc.py::test_atomgroups PASSED [ 85%] 2133s testsuite/MDAnalysisTests/topology/test_altloc.py::test_bonds PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_altloc.py::test_write_read PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_output PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_mandatory_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_expected_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_no_unexpected_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_size PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_tt_size PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_creates_universe PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_guessed_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_guessed_masses PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_guessed_types PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_output PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_mandatory_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_expected_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_no_unexpected_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_size PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_tt_size PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_creates_universe PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_guessed_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_guesssed_masses PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_guessed_types PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_names PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_output PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_mandatory_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_expected_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_no_unexpected_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_size PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_tt_size PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_creates_universe PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_guessed_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_guesssed_masses PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_guessed_types PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_names PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_output PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_mandatory_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_expected_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_no_unexpected_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_size PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_tt_size PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_creates_universe PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_guessed_attributes PASSED [ 85%] 2135s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_dlp_names PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_output PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_mandatory_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_expected_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_no_unexpected_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_size PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_tt_size PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_creates_universe PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_guessed_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_dlp_names PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_output PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_mandatory_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_expected_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_no_unexpected_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_size PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_tt_size PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_creates_universe PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_guessed_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_dlp_names PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_output PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_mandatory_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_expected_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_no_unexpected_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_size PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_tt_size PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_creates_universe PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_guessed_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_dlp_names PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_output PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_mandatory_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_expected_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_no_unexpected_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_size PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_tt_size PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_creates_universe PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_guessed_attributes PASSED [ 85%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_dlp_names PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dlpoly.py::test_HISTORY_EOFError PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_output PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_mandatory_attributes PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_expected_attributes PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_no_unexpected_attributes PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_size PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_tt_size PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_creates_universe PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_guessed_attributes PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_number_of_bonds PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_atomsels PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_guessed_types PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_output PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_mandatory_attributes PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_expected_attributes PASSED [ 86%] 2136s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_no_unexpected_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_size PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_tt_size PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_creates_universe PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_guessed_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_number_of_bonds PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_guessed_types PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_atomsels PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_output PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_mandatory_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_expected_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_no_unexpected_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_size PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_tt_size PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_creates_universe PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_guessed_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_names PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_guessed_types PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_guessed_masses PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_elements PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_output PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_mandatory_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_expected_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_no_unexpected_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_size PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_tt_size PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_creates_universe PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_guessed_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_names PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_types PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_guessed_masses PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_guessed_types PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_output PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_mandatory_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_expected_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_no_unexpected_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_size PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_tt_size PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_creates_universe PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_guessed_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_names PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_types PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_output PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_mandatory_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_expected_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_no_unexpected_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_size PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_tt_size PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_creates_universe PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_guessed_attributes PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_names PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_types PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_guessed_masses PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_guessed_types PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_output PASSED [ 86%] 2137s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_mandatory_attributes PASSED [ 86%] 2138s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_expected_attributes PASSED [ 86%] 2138s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_no_unexpected_attributes PASSED [ 86%] 2138s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_size PASSED [ 86%] 2138s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_tt_size PASSED [ 86%] 2138s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_creates_universe PASSED [ 86%] 2139s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_guessed_attributes PASSED [ 86%] 2139s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_attr_size PASSED [ 86%] 2139s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_guessed_masses PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_guessed_types PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROWideBox::test_atoms PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gro.py::test_parse_empty_atom_IOerror PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gro.py::test_parse_missing_atomname_IOerror PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gro.py::TestGroResidWrapping::test_wrapping_resids[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/residwrap.gro-resids0] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gro.py::TestGroResidWrapping::test_wrapping_resids[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/residwrap_0base.gro-resids1] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gro.py::test_sameresid_diffresname PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_output PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_mandatory_attributes PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_expected_attributes PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_no_unexpected_attributes PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_size PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_tt_size PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_creates_universe PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_guessed_attributes PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_attr_size PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_atoms PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_bonds PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_angles PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_dihedrals PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_impropers PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_output PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_mandatory_attributes PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_expected_attributes PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_no_unexpected_attributes PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_size PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_tt_size PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_creates_universe PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_guessed_attributes PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_attr_size PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_atoms PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_bonds PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_angles PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_dihedrals PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_impropers PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_bonds_identity PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_angles_identity PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_dihedrals_identity PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_masses PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_masses_warn PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_masses_miss PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_get_atom_mass[H-1.008] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_get_atom_mass[XYZ-0.0] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_atom_mass PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_types PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element_empty PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element_singledigit PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element_1H PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[AO5*-O] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[F--F] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[HB1-H] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[OC2-O] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[1he2-H] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[3hg2-H] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[OH--O] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[HO-H] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[he-H] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[zn-ZN] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[Ca2+-CA] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[CA-C] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[N0A-N] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[C0U-C] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[C0S-C] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[Na+-NA] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[Cu2+-CU] PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_charge PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_Error PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_impropers PASSED [ 86%] 2140s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_water PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_adk PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_peptide PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[c1ccccc1] SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[C1=CC=CC=C1] SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[CCO] SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[c1ccccc1Cc1ccccc1] SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[c1ccccc1] SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[C1=CC=CC=C1] SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[CCO] SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[c1ccccc1Cc1ccccc1] SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_masses-arg0] PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[validate_atom_types-arg1] PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_types-arg2] PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_type-CA] PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_element-CA] PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[get_atom_mass-C] PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_mass-CA] PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_charge-CA] PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_bonds_deprecations PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_angles_dihedral_deprecations PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_rdkit_guessers_deprecations SKIPPED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_output PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_mandatory_attributes PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_expected_attributes PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_no_unexpected_attributes PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_size PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_tt_size PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_creates_universe PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_guessed_attributes PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_attr_size PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_bonds PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_angles PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_dihedrals PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_impropers PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_bonds_identity PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_angles_identity PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_dihedrals_identity PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_read_masses PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_read_charges PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_output PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_mandatory_attributes PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_expected_attributes PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_no_unexpected_attributes PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_size PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_tt_size PASSED [ 86%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_creates_universe PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_guessed_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_atom_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_values PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_type PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_atom_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_values PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_type PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_atom_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_multiple_types PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_values PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_type PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_atom_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_values PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_type PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_output PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_mandatory_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_expected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_no_unexpected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_tt_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_creates_universe PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_guessed_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_mass_guess PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_output PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_mandatory_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_expected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_no_unexpected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_tt_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_creates_universe PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_guessed_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_charge_parse PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_mass_parse_or_guess PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_output PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_mandatory_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_expected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_no_unexpected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_tt_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_creates_universe PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_guessed_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_charge_parse PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_masses_are_read PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_output PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_mandatory_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_expected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_no_unexpected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_tt_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_creates_universe PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_guessed_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_bonds_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_angles_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_dihedrals_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_impropers_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_no_extra_angles PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_bonds_atom_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_dihedrals_atom_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_dihedrals_identity PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_output PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_mandatory_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_expected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_no_unexpected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_tt_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_creates_universe PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_guessed_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_bonds_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_angles_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_dihedrals_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_impropers_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_whether_settles_types PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_bonds_values PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_defines PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_guessed_masses PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_output PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_mandatory_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_expected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_no_unexpected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_tt_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_creates_universe PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_guessed_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_bonds_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_angles_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_dihedrals_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_impropers_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_bonds_values PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_guessed_masses PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_whether_settles_types PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_angles_values PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_defines PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_kwargs_overrides_defines PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_output PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_mandatory_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_expected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_no_unexpected_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_tt_size PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_creates_universe PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_guessed_attributes PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_bonds_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_angles_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_dihedrals_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_impropers_total_counts PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_heavy_atom PASSED [ 87%] 2141s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_mandatory_attributes PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_expected_attributes PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_no_unexpected_attributes PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_size PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_tt_size PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_bonds_total_counts PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_angles_total_counts PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_dihedrals_total_counts PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_impropers_total_counts PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_output PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_creates_universe PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_guessed_attributes PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_sequential PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestErrors::test_no_include PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestErrors::test_missing_endif PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestRelativePath::test_relstring PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestRelativePath::test_relpath PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::TestRelativePath::test_relative_path PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::test_missing_elements_no_attribute PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::test_elements_deprecation_warning PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_itp.py::test_elements_nodeprecation_warning PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_output PASSED [ 87%] 2142s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_mandatory_attributes PASSED [ 87%] 2143s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_expected_attributes PASSED [ 87%] 2143s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_no_unexpected_attributes PASSED [ 87%] 2143s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_size PASSED [ 87%] 2143s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_tt_size PASSED [ 87%] 2143s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_atom_types PASSED [ 87%] 2144s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_bonds PASSED [ 87%] 2144s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_bond_member PASSED [ 87%] 2144s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_angles PASSED [ 87%] 2144s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_angle_member PASSED [ 87%] 2145s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_dihedrals PASSED [ 87%] 2145s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_dihedral_member PASSED [ 87%] 2145s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_impropers PASSED [ 87%] 2145s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_improper_member PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_creates_universe PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_guessed_attributes PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_atom_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_atom_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_bond_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_bond_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_angles[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_angles[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_angle_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2146s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_angle_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_dihedrals[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_dihedrals[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_dihedral_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_dihedral_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_impropers[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_impropers[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_improper_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_improper_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_atom_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_atom_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_bond_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_bond_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_angles[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_angles[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_angle_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_angle_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_dihedrals[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_dihedrals[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_dihedral_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_dihedral_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_impropers[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_impropers[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_improper_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_improper_member[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_output PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_mandatory_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_expected_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_no_unexpected_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_size PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_tt_size PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_atom_types PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_bonds PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_bond_member PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_angles PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_angle_member PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_dihedrals PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_dihedral_member PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_impropers PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_improper_member PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_creates_universe PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_guessed_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_atom_ids PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_traj PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_output PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_mandatory_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_expected_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_no_unexpected_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_size PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_tt_size PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_atom_types PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_bonds PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_bond_member PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_angles PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_angle_member PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_dihedrals PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_dihedral_member PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_impropers PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_improper_member PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_creates_universe PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_guessed_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_noresid PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_noresid_failure PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_interpret_atom_style PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_interpret_atom_style_missing PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_output PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_mandatory_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_expected_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_no_unexpected_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_size PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_tt_size PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_creates_universe PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_masses_warning PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_guessed_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_id_ordering PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_guessed_masses PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_guessed_types PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_output PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_mandatory_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_expected_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_no_unexpected_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_size PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_tt_size PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_creates_universe PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_masses_warning PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_guessed_attributes PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_id_ordering PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_guessed_masses PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_guessed_types PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/test.inpcrd-5] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd-12421] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/bala.ncdf-2661] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.trr-47681] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc-47681] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[filename6-10] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 88%] 2147s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/test.inpcrd-5] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd-12421] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/bala.ncdf-2661] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.trr-47681] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc-47681] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[filename6-10] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser_fail[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.mdcrd-252] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser_fail[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/bala.trj-2661] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser_fail[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trzfile.trz-8184] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_n_atoms_kwarg[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.mdcrd-252] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_n_atoms_kwarg[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/bala.trj-2661] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_n_atoms_kwarg[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/trzfile.trz-8184] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array0-fac] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array1-fca] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array2-afc] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array3-acf] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array4-cfa] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array5-caf] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array0-fac] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array1-fca] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array2-afc] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array3-acf] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array4-cfa] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array5-caf] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_output PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_mandatory_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_expected_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_no_unexpected_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_size PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_tt_size PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_creates_universe PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_guessed_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_output PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_mandatory_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_expected_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_no_unexpected_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_size PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_tt_size PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_creates_universe PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_guessed_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_output PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_mandatory_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_expected_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_no_unexpected_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_size PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_tt_size PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_creates_universe PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_guessed_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_output PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_mandatory_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_expected_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_no_unexpected_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_size PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_tt_size PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_creates_universe PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_guessed_attributes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_bonds PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_ids PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_names PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_resnames PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_segids PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_resids PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_occupancies PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_bfactors PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_types PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_models PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_icodes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_altlocs PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_guessed_masses PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_bonds PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_ids PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_names PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_resnames PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_segids PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_resids PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_occupancies PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_bfactors PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_types PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_models PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_icodes PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_altlocs PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_guessed_masses PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverse::test_models PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverse::test_universe_models PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverse::test_guessed_masses PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverseFromDecoder::test_models PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverseFromDecoder::test_universe_models PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverseFromDecoder::test_guessed_masses PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_selection PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_2 PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_3 PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_4 PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_5 PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_attr_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_attr_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_bond_orders PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_elements PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_elements_selection PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_wrong_elements_warnings PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_all_wrong_elements_warnings PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_all_elements PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_wo_optional_columns PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_partial_optional_columns PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_mol2_wo_required_columns PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_mol2_no_charges PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_unformat PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_mol2.py::test_guessed_masses PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[A0000-100000] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[MEGAN-20929695] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[J0NNY-15247214] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[DREW6-6417862] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ST3V3-31691119] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ADA8M-719798] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[a0000-43770016] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[megan-64599711] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[j0nny-58917230] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[drew6-50087878] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[st3v3-75361135] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ada8m-44389814] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 6-6] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 24-24] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 645-645] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 4951-4951] PASSED [ 89%] 2148s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[10267-10267] PASSED [ 89%] 2149s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_output PASSED [ 89%] 2149s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_mandatory_attributes PASSED [ 89%] 2149s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_expected_attributes PASSED [ 89%] 2149s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_no_unexpected_attributes PASSED [ 89%] 2150s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_size PASSED [ 89%] 2150s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_tt_size PASSED [ 89%] 2151s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_creates_universe PASSED [ 89%] 2151s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_guessed_attributes PASSED [ 89%] 2151s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_output PASSED [ 89%] 2151s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_mandatory_attributes PASSED [ 89%] 2151s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_expected_attributes PASSED [ 89%] 2151s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_no_unexpected_attributes PASSED [ 89%] 2151s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_size PASSED [ 89%] 2151s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_tt_size PASSED [ 89%] 2151s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_creates_universe PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_guessed_attributes PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBConect::test_conect_parser PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBConect::test_conect_parser_runtime PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBConect::test_conect_topo_parser PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_conect2ter PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_single_conect PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_new_chainid_new_res PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_sameresid_diffresname PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_record_types PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_no_resid PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_hex PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_metals PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_elements PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_missing_elements_noattribute PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_wrong_elements_warnings PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_guessed_masses_and_types_values PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_nobonds_error PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_charges PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_bad_charges[REMARK Invalid charge assignment - no sign for MG2+\nHETATM 1 CU CU A 1 03.000 00.000 00.000 1.00 00.00 CU2+\nHETATM 2 FE FE A 2 00.000 03.000 00.000 1.00 00.00 Fe2+\nHETATM 3 Mg Mg A 3 03.000 03.000 03.000 1.00 00.00 MG2\nEND\n-2] PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_bad_charges[REMARK Invalid charge format for MG2+\nHETATM 1 CU CU A 1 03.000 00.000 00.000 1.00 00.00 CU2+\nHETATM 2 FE FE A 2 00.000 03.000 00.000 1.00 00.00 Fe2+\nHETATM 3 Mg Mg A 3 03.000 03.000 03.000 1.00 00.00 MG+2\nEND\n-\\+2] PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_output PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_mandatory_attributes PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_expected_attributes PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_no_unexpected_attributes PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_size PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_tt_size PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_creates_universe PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_guessed_attributes PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_guessed_masses PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pdbqt.py::test_footnote PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_output PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_mandatory_attributes PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_expected_attributes PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_no_unexpected_attributes PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_size PASSED [ 89%] 2152s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_tt_size PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_creates_universe PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_guessed_attributes PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_attr_size PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_guessed_masses PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_guessed_types PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_output PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_mandatory_attributes PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_expected_attributes PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_no_unexpected_attributes PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_size PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_tt_size PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_creates_universe PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_guessed_attributes PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_attr_size PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_guessed_masses PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_guessed_types PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::test_record_types PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_pqr.py::test_gromacs_flavour PASSED [ 89%] 2153s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_output[uncompressed] PASSED [ 89%] 2154s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_output[bz2] PASSED [ 89%] 2154s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_mandatory_attributes[uncompressed] PASSED [ 89%] 2154s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_mandatory_attributes[bz2] PASSED [ 89%] 2154s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_expected_attributes[uncompressed] PASSED [ 89%] 2155s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_expected_attributes[bz2] PASSED [ 89%] 2155s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_no_unexpected_attributes[uncompressed] PASSED [ 89%] 2155s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_no_unexpected_attributes[bz2] PASSED [ 89%] 2155s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_size[uncompressed] PASSED [ 89%] 2156s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_size[bz2] PASSED [ 89%] 2156s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_tt_size[uncompressed] PASSED [ 89%] 2156s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_tt_size[bz2] PASSED [ 89%] 2156s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_creates_universe[uncompressed] PASSED [ 89%] 2157s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_creates_universe[bz2] PASSED [ 89%] 2157s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_guessed_attributes[uncompressed] PASSED [ 89%] 2157s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_guessed_attributes[bz2] PASSED [ 89%] 2157s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_total_counts[uncompressed] PASSED [ 89%] 2158s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_total_counts[bz2] PASSED [ 89%] 2158s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_atom_counts[uncompressed] PASSED [ 89%] 2158s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_atom_counts[bz2] PASSED [ 89%] 2158s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_identity[uncompressed] PASSED [ 89%] 2159s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_identity[bz2] PASSED [ 89%] 2159s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_total_counts[uncompressed] PASSED [ 89%] 2159s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_total_counts[bz2] PASSED [ 89%] 2159s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_atom_counts[uncompressed] PASSED [ 89%] 2160s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_atom_counts[bz2] PASSED [ 89%] 2160s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_identity[uncompressed] PASSED [ 89%] 2160s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_identity[bz2] PASSED [ 89%] 2160s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_total_counts[uncompressed] PASSED [ 89%] 2161s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_total_counts[bz2] PASSED [ 89%] 2161s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_atom_counts[uncompressed] PASSED [ 89%] 2161s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_atom_counts[bz2] PASSED [ 89%] 2161s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_identity[uncompressed] PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_identity[bz2] PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_output PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_mandatory_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_expected_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_no_unexpected_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_size PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_tt_size PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_creates_universe PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_guessed_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_output PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_mandatory_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_expected_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_no_unexpected_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_size PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_tt_size PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_creates_universe PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_guessed_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_as_universe_resids PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_output PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_mandatory_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_expected_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_no_unexpected_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_size PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_tt_size PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_creates_universe PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_guessed_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_bonds_total_counts PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_angles_total_counts PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_dihedrals_total_counts PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_impropers_total_counts PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::test_psf_nosegid PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_psf.py::test_psf_inscode PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_tables.py::test_moved_to_guessers_warning PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_output PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_mandatory_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_expected_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_no_unexpected_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_size PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_tt_size PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_creates_universe PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_guessed_attributes PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_attr_size PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_bonds_atom_counts PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_angles_atom_counts PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_dihedrals_atom_counts PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_impropers_atom_counts PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_bonds_identity PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_angles_identity PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_dihedrals_identity PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_impropers_identity PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_angle_atoms_bonded PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_dihedral_atoms_bonded PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_improper_atoms_bonded PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_elements PASSED [ 89%] 2162s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_output PASSED [ 89%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_mandatory_attributes PASSED [ 89%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_expected_attributes PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_no_unexpected_attributes PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_size PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_tt_size PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_creates_universe PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_guessed_attributes PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_attr_size PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_bonds_atom_counts PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_angles_atom_counts PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_dihedrals_atom_counts PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_impropers_atom_counts PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_bonds_identity PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_angles_identity PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_dihedrals_identity PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_impropers_identity PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_angle_atoms_bonded PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_dihedral_atoms_bonded PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_improper_atoms_bonded PASSED [ 90%] 2163s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_elements PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_chainIDs PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_output PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_mandatory_attributes PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_expected_attributes PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_no_unexpected_attributes PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_size PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_tt_size PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_creates_universe PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_guessed_attributes PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_attr_size PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_bonds_atom_counts PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_angles_atom_counts PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_dihedrals_atom_counts PASSED [ 90%] 2164s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_impropers_atom_counts PASSED [ 90%] 2165s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_bonds_identity PASSED [ 90%] 2165s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_angles_identity PASSED [ 90%] 2165s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_dihedrals_identity PASSED [ 90%] 2165s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_impropers_identity PASSED [ 90%] 2165s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_angle_atoms_bonded PASSED [ 90%] 2165s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_dihedral_atoms_bonded PASSED [ 90%] 2165s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_improper_atoms_bonded PASSED [ 90%] 2165s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_elements PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_output PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_mandatory_attributes PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_expected_attributes PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_no_unexpected_attributes PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_size PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_tt_size PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_creates_universe PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_guessed_attributes PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_attr_size PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_bonds_atom_counts PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_angles_atom_counts PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_dihedrals_atom_counts PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_impropers_atom_counts PASSED [ 90%] 2166s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_bonds_identity PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_angles_identity PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_dihedrals_identity PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_impropers_identity PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_angle_atoms_bonded PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_dihedral_atoms_bonded PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_improper_atoms_bonded PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_elements PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_output PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_mandatory_attributes PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_expected_attributes PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_no_unexpected_attributes PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_size PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_tt_size PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_creates_universe PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_guessed_attributes PASSED [ 90%] 2167s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_attr_size PASSED [ 90%] 2168s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_bonds_atom_counts PASSED [ 90%] 2168s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_angles_atom_counts PASSED [ 90%] 2168s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_dihedrals_atom_counts PASSED [ 90%] 2168s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_impropers_atom_counts PASSED [ 90%] 2168s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_bonds_identity PASSED [ 90%] 2168s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_angles_identity PASSED [ 90%] 2168s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_dihedrals_identity PASSED [ 90%] 2168s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_impropers_identity PASSED [ 90%] 2168s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_angle_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_dihedral_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_improper_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_elements PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_output PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_mandatory_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_expected_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_no_unexpected_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_size PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_tt_size PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_creates_universe PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_guessed_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_attr_size PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_bonds_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_angles_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_dihedrals_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_impropers_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_bonds_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_angles_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_dihedrals_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_impropers_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_angle_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_dihedral_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_improper_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_elements PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_output PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_mandatory_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_expected_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_no_unexpected_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_size PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_tt_size PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_creates_universe PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_guessed_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_attr_size PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_bonds_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_angles_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_dihedrals_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_impropers_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_bonds_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_angles_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_dihedrals_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_impropers_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_angle_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_dihedral_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_improper_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_elements PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_output PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_mandatory_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_expected_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_no_unexpected_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_size PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_tt_size PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_creates_universe PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_guessed_attributes PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_attr_size PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_bonds_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_angles_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_dihedrals_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_impropers_atom_counts PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_bonds_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_angles_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_dihedrals_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_impropers_identity PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_angle_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_dihedral_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_improper_atoms_bonded PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_elements PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.error1.parm7-%VE Missing in header] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.error2.parm7-'TITLE' missing in header] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.error4.parm7-Invalid header line.] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/parmed_fad.prmtop-Chamber-style TOP file] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_flag_index_error PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-errmsgs0] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-errmsgs1] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/capped-ala.prmtop-errmsgs2] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.negative.parm7-errmsgs3] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ala.ff19SB.OPC.parm7.bz2-errmsgs4] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache_chainid.error5.prmtop.bz2-errmsgs5] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_base.py::TestSquash::test_squash PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_base.py::TestChangeSquash::test_resid_squash PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_base.py::TestChangeSquash::test_segid_squash PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-name] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-resname] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-type] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-segid] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-moltype] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.crd-name] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.crd-resname] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.crd-type] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.crd-segid] PASSED [ 90%] 2169s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.crd-moltype] PASSED [ 90%] 2170s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-name] PASSED [ 90%] 2170s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-resname] PASSED [ 90%] 2170s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-type] PASSED [ 90%] 2171s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-segid] PASSED [ 90%] 2171s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-moltype] PASSED [ 90%] 2171s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_closed.dms-name] PASSED [ 90%] 2171s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_closed.dms-resname] PASSED [ 90%] 2172s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_closed.dms-type] PASSED [ 90%] 2172s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_closed.dms-segid] PASSED [ 90%] 2172s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_closed.dms-moltype] PASSED [ 90%] 2172s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-name] PASSED [ 90%] 2172s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-resname] PASSED [ 90%] 2172s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-type] PASSED [ 90%] 2172s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-segid] PASSED [ 90%] 2172s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-moltype] PASSED [ 90%] 2172s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-name] PASSED [ 90%] 2173s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-resname] PASSED [ 90%] 2173s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-type] PASSED [ 90%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-segid] PASSED [ 90%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-moltype] PASSED [ 90%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-name] PASSED [ 90%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-resname] PASSED [ 90%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-type] PASSED [ 90%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-segid] PASSED [ 90%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-moltype] PASSED [ 90%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/173D.mmtf-name] PASSED [ 90%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/173D.mmtf-resname] PASSED [ 90%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/173D.mmtf-type] PASSED [ 91%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/173D.mmtf-segid] PASSED [ 91%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/173D.mmtf-moltype] PASSED [ 91%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-name] PASSED [ 91%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-resname] PASSED [ 91%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-type] PASSED [ 91%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-segid] PASSED [ 91%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-moltype] PASSED [ 91%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-name] PASSED [ 91%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-resname] PASSED [ 91%] 2174s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-type] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-segid] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-moltype] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pdb-name] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pdb-resname] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pdb-type] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pdb-segid] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pdb-moltype] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-name] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-resname] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-type] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-segid] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-moltype] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pqr-name] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pqr-resname] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pqr-type] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pqr-segid] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_open.pqr-moltype] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-name] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-resname] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-type] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-segid] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-moltype] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk.psf-name] PASSED [ 91%] 2175s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk.psf-resname] PASSED [ 91%] 2176s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk.psf-type] PASSED [ 91%] 2176s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk.psf-segid] PASSED [ 91%] 2176s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk.psf-moltype] PASSED [ 91%] 2176s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/anti.top-name] PASSED [ 91%] 2176s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/anti.top-resname] PASSED [ 91%] 2176s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/anti.top-type] PASSED [ 91%] 2176s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/anti.top-segid] PASSED [ 91%] 2176s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/anti.top-moltype] PASSED [ 91%] 2176s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-name] PASSED [ 91%] 2177s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-resname] PASSED [ 91%] 2177s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-type] PASSED [ 91%] 2177s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-segid] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-moltype] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-name] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-resname] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-type] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-segid] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-moltype] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-name] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-resname] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-type] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-segid] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-moltype] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mini.xyz-name] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mini.xyz-resname] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mini.xyz-type] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mini.xyz-segid] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mini.xyz-moltype] PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_output PASSED [ 91%] 2178s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_mandatory_attributes PASSED [ 91%] 2180s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_expected_attributes PASSED [ 91%] 2180s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_no_unexpected_attributes PASSED [ 91%] 2180s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_size PASSED [ 91%] 2180s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_tt_size PASSED [ 91%] 2180s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_creates_universe PASSED [ 91%] 2180s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_guessed_attributes PASSED [ 91%] 2181s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_moltypes PASSED [ 91%] 2182s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_molnums PASSED [ 91%] 2182s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_chainIDs PASSED [ 91%] 2182s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 2182s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 2182s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 2182s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 2183s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 2184s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 2185s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 2185s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 2185s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 2185s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 2185s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 2186s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 2187s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 2188s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 2189s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 2189s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 2189s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 2189s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 2189s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 2189s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 2189s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 2189s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 2189s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 2190s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 2190s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 2190s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 2190s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 2190s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 2190s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 2190s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 2191s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 2192s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 2193s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 2193s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 2193s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 2193s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 2193s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 2193s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 2194s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 2194s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 2194s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 2194s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 2194s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 2194s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 2194s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 2194s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 2194s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 2194s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 2195s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 2196s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 2197s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 2198s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 2198s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 2198s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 2198s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 2198s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 2198s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 2198s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 2198s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 2199s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 2199s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 2199s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 2199s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 2199s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 2199s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 2199s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 2199s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 2200s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 2201s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 2202s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 2202s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 2202s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 2202s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 2203s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 2204s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 2205s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 2206s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 2206s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 2206s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 2206s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 2206s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 2207s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 2208s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 2209s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 2210s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 2210s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 2210s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 2210s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 2210s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 2211s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 2212s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 2213s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 2213s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 2213s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_output PASSED [ 92%] 2213s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_mandatory_attributes PASSED [ 92%] 2213s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_expected_attributes PASSED [ 92%] 2213s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_no_unexpected_attributes PASSED [ 92%] 2214s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_size PASSED [ 92%] 2214s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_tt_size PASSED [ 92%] 2214s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_creates_universe PASSED [ 92%] 2214s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_guessed_attributes PASSED [ 92%] 2215s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_moltypes PASSED [ 92%] 2215s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_molnums PASSED [ 92%] 2215s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_chainIDs PASSED [ 92%] 2215s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 2215s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 2216s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 2216s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 2216s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 2217s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 2217s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 2218s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 2218s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 2218s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 2218s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 2219s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 2219s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 93%] 2219s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 2220s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 93%] 2220s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 2220s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 93%] 2220s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_moltypes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 2221s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 93%] 2221s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_molnums[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 2221s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_chainIDs[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 2222s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 95%] 2223s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 95%] 2224s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 95%] 2224s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 95%] 2224s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020-beta2.tpr-OSError] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020-beta2.tpr-OSError] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.tpr-NotImplementedError] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc-OSError] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 2225s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 2226s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_elements PASSED [ 95%] 2226s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_resids[False-0] PASSED [ 95%] 2227s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_resids[True-1] PASSED [ 95%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_number_of_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_number_of_bonds[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_atom_type_type[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_atom_type_type[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::test_TXYZ_elements PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::test_missing_elements_noattribute PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_txyz.py::test_guessed_masses PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_output PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_mandatory_attributes PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_expected_attributes PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_no_unexpected_attributes PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_size PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_tt_size PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_creates_universe PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_guessed_attributes PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_guessed_masses PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_guessed_types PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_output PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_mandatory_attributes PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_expected_attributes PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_no_unexpected_attributes PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_size PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_tt_size PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_creates_universe PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_guessed_attributes PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_output[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_mandatory_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_expected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_tt_size[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_creates_universe[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_attributes[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_masses[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_masses[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_types[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 2227s testsuite/MDAnalysisTests/transformations/test_base.py::test_default_value PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_base.py::test_no_transform_function PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_base.py::test_custom_value PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_base.py::test_setting_thread_limit_value PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_base.py::test_thread_limit_apply PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_boxdimensions_dims PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes0] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes1] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes2] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes3] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes4] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes5] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[111909090] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector_asarray[dim_vector_forms_dtypes0] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector_asarray[dim_vector_forms_dtypes1] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector_asarray[abcd] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_transformations_api PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_varying_dimensions_transformations_api PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_varying_dimensions_no_data PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe0] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe1] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe2] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe3] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe4] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe5] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[thisisnotanag] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[1] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[ ] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[totallynotmasses] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[123456789] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights3] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights4] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights5] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights6] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[1] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[plane1] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[plane2] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[plane3] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[xyz] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[notaplane] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_no_masses PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_no_options PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_residue_mismatch PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_com PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_plane[yz] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_plane[xz] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_plane[xy] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_all_options PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_transformations_api PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe0] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe1] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe2] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe3] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe4] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe5] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[thisisnotanag] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[1] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_shorter_universe PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[ ] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[totallynotmasses] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[123456789] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights3] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights4] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights5] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights6] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[ ] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[totallynotaplane] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[xyz] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[123456789] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane4] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane5] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane6] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane7] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_no_options PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_plane[yz] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_plane[xz] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_plane[xy] PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_transformations_api PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_orthogonal_fwd PASSED [ 96%] 2228s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_nonorthogonal_fwd PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_2nd_frame PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_3rd_frame PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_iterate_twice PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel_skip PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel_stride_2 PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel_jumparound PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_missing_dimensions_init PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_missing_dimensions PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_notinvertible PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_fwd PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_bwd PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_reset PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_specific PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_specific_noreset PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotation_matrix PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_custom_point[point0] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_custom_point[point1] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_vector[vector0] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_vector[vector1] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_cog_nopbc PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_com_nopbc PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_cog_pbc PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_com_pbc PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag0] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag1] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag2] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag3] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag4] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag5] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[thisisnotanag] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[1] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point0] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point1] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point2] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point3] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point4] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point5] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[thisisnotapoint] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[1] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction0] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction1] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction2] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction3] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction4] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction5] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[thisisnotadirection] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[1] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_pbc PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[ ] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[totallynotmasses] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[123456789] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights3] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights4] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights5] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights6] PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_no_masses PASSED [ 96%] 2229s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_no_args PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_coords PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector0] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector1] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector2] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector3] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector4] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector5] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_transformations_api PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_ag PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point0] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point1] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point2] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point3] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point4] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point5] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_pbc PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_center PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_no_masses PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_no_options PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_with_pbc PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_with_mass PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_with_box PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_all_options PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_transformations_api PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag0] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag1] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag2] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag3] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag4] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag5] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[thisisnotanag] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[1] PASSED [ 97%] 2229s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_no_options PASSED [ 97%] 2231s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_with_compounds[group] PASSED [ 97%] 2232s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_with_compounds[residues] PASSED [ 97%] 2234s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_with_compounds[segments] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_with_compounds[fragments] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_api PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag0] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag1] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag2] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag3] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag4] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag5] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[thisisnotanag] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[1] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap PASSED [ 97%] 2237s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_api PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_authors.py::test_package_authors PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_failed_import PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_import PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_all_exports PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_export_variables PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_active PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_primary[MDAnalysis-MDAnalysis-10.25080/majora-629e541a-00e] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_primary[MDAnalysis-MDAnalysis-10.1002/jcc.21787] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.hydrogenbonds.hbond_autocorrel-MDAnalysis.analysis.hydrogenbonds.hbond_autocorrel-10.1063/1.4922445] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.leaflet-MDAnalysis.analysis.leaflet-10.1002/jcc.21787] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.lib.qcprot-MDAnalysis.lib.qcprot-10.1107/s0108767305015266] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.lib.qcprot-MDAnalysis.lib.qcprot-qcprot2] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.encore-MDAnalysis.analysis.encore-10.1371/journal.pcbi.1004415] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.dssp-MDAnalysis.analysis.dssp-10.1002/bip.360221211] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_mmtf PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_h5md PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_failure.py::test_failure PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/datafiles.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/dummy.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/test_api.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/util.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/conftest.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_align.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_atomicdistances.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_backends.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_base.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_bat.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_contacts.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_data.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_density.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dielectric.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_diffusionmap.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dihedrals.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_distances.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_dssp.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_encore.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_gnm.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_helix_analysis.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_leaflet.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_lineardensity.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_msd.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_nucleicacids.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_nuclinfo.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_pca.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_persistencelength.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rdf.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rdf_s.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_results.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_rms.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_wbridge.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_hole2.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_psa.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/analysis/test_waterdynamics.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/auxiliary/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/auxiliary/base.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/auxiliary/test_core.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/auxiliary/test_edr.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/auxiliary/test_xvg.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_base.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_openmm.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_openmm_parser.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_parmed.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_parmed_parser.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_rdkit.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/converters/test_rdkit_parser.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/base.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/reference.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_chainreader.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_chemfiles.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_copying.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_crd.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_dcd.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_dlpoly.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_dms.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_fhiaims.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_gms.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_gro.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_gsd.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_h5md.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_lammps.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_memory.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_mmtf.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_mol2.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_namdbin.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_netcdf.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_null.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_pdb.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_pdbqt.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_pqr.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_reader_api.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_timestep_api.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_tng.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_trc.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_trj.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_trz.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_txyz.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_windows.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_writer_api.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_writer_registration.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_xdr.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/coordinates/test_xyz.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_accessors.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_accumulate.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_atom.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_atomgroup.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_atomselections.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_copying.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_fragments.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_group_traj_access.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_groups.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_index_dtype.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_requires.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_residue.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_residuegroup.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_segment.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_segmentgroup.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_topology.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_topologyattrs.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_topologyobjects.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_universe.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_unwrap.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_updating_atomgroup.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/test_wrap.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/core/util.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/Amber/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/analysis/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/capping/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/contacts/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/create_data.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/coordinates/create_h5md_data.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/dlpoly/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gms/__init__.py] PASSED [ 97%] 2237s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gromacs/__init__.py] PASSED [ 97%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/__init__.py] PASSED [ 97%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/gromos11/__init__.py] PASSED [ 97%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/lammps/__init__.py] PASSED [ 97%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/merge/__init__.py] PASSED [ 97%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/merge/2zmm/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/mol2/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/data/windows/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/formats/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/formats/test_libdcd.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/formats/test_libmdaxdr.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/guesser/test_base.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/guesser/test_default_guesser.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/import/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/import/fork_called.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/import/test_import.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_augment.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_cutil.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_distances.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_log.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_neighborsearch.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_nsgrid.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_pkdtree.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_qcprot.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/lib/test_util.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/base.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_altloc.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_crd.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_dlpoly.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_dms.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_fhiaims.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_gms.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_gro.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_gsd.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_guessers.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_hoomdxml.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_itp.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_lammpsdata.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_minimal.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_mmtf.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_mol2.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_pdb.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_pdbqt.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_pqr.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_psf.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_tables.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_top.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_topology_base.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_topology_str_types.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_tprparser.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_txyz.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_xpdb.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/topology/test_xyz.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_base.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_boxdimensions.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_fit.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_nojump.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_positionaveraging.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_rotate.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_translate.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/transformations/test_wrap.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_authors.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_datafiles.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_duecredit.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_failure.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_imports.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_log.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_meta.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_modelling.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_persistence.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_pickleio.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_qcprot.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_selections.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_streamio.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_transformations.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/utils/test_units.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/visualization/__init__.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.0yRE7m/build.hps/src/testsuite/MDAnalysisTests/visualization/test_streamlines.py] PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_log.py::test_start_stop_logging PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_meta.py::test_import PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_meta.py::test_matching_versions PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_meta.py::test_version_format PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_meta.py::test_version_at_packagelevel PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_modelling.py::TestCapping::test_capping_file PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_modelling.py::TestCapping::test_capping_inmemory PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_merge PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_merge_same_universe PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_residue_references PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_segment_references PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_empty_ValueError PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_nonsense_TypeError PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_emptyAG_ValueError PASSED [ 98%] 2238s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_merge_without_coords PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMergeTopology::test_merge_with_topology PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMergeTopology::test_merge_with_topology_from_different_universes PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMergeTopology::test_merge_without_topology PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_persistence.py::TestAtomGroupPickle::test_unpickle PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_persistence.py::TestAtomGroupPickle::test_pickle_unpickle_empty PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_persistence.py::TestAtomGroupPickle::test_unpickle_two_ag PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_persistence.py::TestAtomGroupPickle::test_unpickle_ag_with_universe_f PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_persistence.py::TestAtomGroupPickle::test_unpickle_ag_with_universe PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_persistence.py::TestPicklingUpdatingAtomGroups::test_pickling_uag PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_persistence.py::TestPicklingUpdatingAtomGroups::test_pickling_uag_of_uag PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_get_right_open_handler_text[f_text0] PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_get_right_open_handler_text[f_text1] PASSED [ 98%] 2239s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_get_right_open_handler_text[f_text2] PASSED [ 98%] 2240s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_get_right_open_handler_text[f_text3] PASSED [ 98%] 2240s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_iopickle_text[f_text0] PASSED [ 98%] 2241s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_iopickle_text[f_text1] PASSED [ 98%] 2241s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_iopickle_text[f_text2] PASSED [ 98%] 2241s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_iopickle_text[f_text3] PASSED [ 98%] 2241s 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testsuite/MDAnalysisTests/utils/test_pickleio.py::test_iopickle_byte[f_byte2] PASSED [ 98%] 2245s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_offset_byte_to_tell[f_byte0] PASSED [ 98%] 2245s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_offset_byte_to_tell[f_byte1] PASSED [ 98%] 2245s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_offset_byte_to_tell[f_byte2] PASSED [ 98%] 2246s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_context_manager_pickle PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_fileio_pickle PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_unpicklable_open_mode[unpicklable_f0] PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_unpicklable_open_mode[unpicklable_f1] PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_unpicklable_open_mode[unpicklable_f2] PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_unpicklable_open_mode[unpicklable_f3] PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_unpicklable_open_mode[unpicklable_f4] PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_pickle_with_write_mode[unpicklable_f0] PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_pickle_with_write_mode[unpicklable_f1] PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_pickle_with_write_mode[unpicklable_f2] PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_pickle_with_write_mode[unpicklable_f3] PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_pickle_with_write_mode[unpicklable_f4] PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_GSD_pickle PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_GSD_with_write_mode PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_NCDF_pickle PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_NCDF_mmap_pickle PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_Chemfiles_pickle SKIPPED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_Chemfiles_with_write_mode SKIPPED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_H5MD_pickle PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_pickleio.py::test_H5MD_pickle_with_driver PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_qcprot.py::test_CalcRMSDRotationalMatrix PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_qcprot.py::test_innerproduct PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_qcprot.py::test_RMSDmatrix PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_qcprot.py::test_RMSDmatrix_simple PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_qcprot.py::test_rmsd PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_qcprot.py::test_weights PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Gromacs::test_write_bad_mode PASSED [ 98%] 2251s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Gromacs::test_write PASSED [ 98%] 2252s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Gromacs::test_writeselection PASSED [ 98%] 2252s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Gromacs::test_write_with PASSED [ 98%] 2252s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Charmm::test_write_bad_mode PASSED [ 98%] 2252s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Charmm::test_write PASSED [ 98%] 2252s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Charmm::test_writeselection PASSED [ 98%] 2252s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Charmm::test_write_with PASSED [ 98%] 2252s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_PyMOL::test_write_bad_mode PASSED [ 98%] 2252s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_PyMOL::test_write PASSED [ 98%] 2252s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_PyMOL::test_writeselection PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_PyMOL::test_write_with PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_VMD::test_write_bad_mode PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_VMD::test_write PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_VMD::test_writeselection PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_VMD::test_write_with PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Jmol::test_write_bad_mode PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Jmol::test_write PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Jmol::test_writeselection PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelectionWriter_Jmol::test_write_with PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_selections.py::TestSelections::test_get_writer_valid PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestIsstream::test_hasmethod PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestIsstream::test_string PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestIsstream::test_list PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestIsstream::test_iterator PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestIsstream::test_file PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestIsstream::test_StringIO_read PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestIsstream::test_StringIO_write PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream::test_closing PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream::test_closing_force PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream::test_StringIO_read PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream::test_File_read PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream::test_StringIO_write PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream::test_File_write PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream::test_matryoshka PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_func[abspath] PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_func[basename] PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_func[dirname] PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_func[expanduser] PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_func[_path_normpath] PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_func[relpath] PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_func[split] PASSED [ 98%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_func[splitext] PASSED [ 99%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_join PASSED [ 99%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_expanduser_noexpansion_returns_NamedStream PASSED [ 99%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_expandvars PASSED [ 99%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_expandvars_noexpansion_returns_NamedStream PASSED [ 99%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_add PASSED [ 99%] 2253s testsuite/MDAnalysisTests/utils/test_streamio.py::TestNamedStream_filename_behavior::test_radd PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_streamio.py::TestStreamIO::test_PrimitivePDBReader PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_streamio.py::TestStreamIO::test_PDBReader PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_streamio.py::TestStreamIO::test_CRDReader PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_streamio.py::TestStreamIO::test_PSFParser PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_streamio.py::TestStreamIO::test_PSF_CRD PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_streamio.py::TestStreamIO::test_PQRReader PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_streamio.py::TestStreamIO::test_PDBQTReader PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_streamio.py::TestStreamIO::test_GROReader PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_streamio.py::TestStreamIO::test_MOL2Reader PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_streamio.py::TestStreamIO::test_XYZReader PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_identity_matrix[identity_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_identity_matrix[identity_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_translation_matrix[translation_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_translation_matrix[translation_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_translation_from_matrix PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_reflection_matrix[reflection_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_reflection_matrix[reflection_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_reflection_from_matrix PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_rotation_matrix[rotation_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_rotation_matrix[rotation_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_rotation_from_matrix PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_scale_matrix[scale_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_scale_matrix[scale_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_scale_from_matrix PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionMatrix::test_projection_matrix_1[projection_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionMatrix::test_projection_matrix_1[projection_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionMatrix::test_projection_matrix_2[projection_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionMatrix::test_projection_matrix_2[projection_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionMatrix::test_projection_matrix_3[projection_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionMatrix::test_projection_matrix_3[projection_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionFromMatrix::test_projection_from_matrix_1 PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionFromMatrix::test_projection_from_matrix_2 PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionFromMatrix::test_projection_from_matrix_3 PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionFromMatrix::test_projection_from_matrix_4 PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_1[clip_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_1[clip_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_2[clip_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_2[clip_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_left_right_bounds[clip_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_left_right_bounds[clip_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_bottom_top_bounds[clip_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_bottom_top_bounds[clip_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_near_far_bounds[clip_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_near_far_bounds[clip_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_shear_matrix[shear_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_shear_matrix[shear_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_shear_from_matrix PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestDecomposeMatrix::test_decompose_matrix_1 PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestDecomposeMatrix::test_decompose_matrix_2 PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestDecomposeMatrix::test_decompose_matrix_3 PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_compose_matrix PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestOrthogonalizationMatrix::test_orthogonalization_matrix_1[orthogonalization_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestOrthogonalizationMatrix::test_orthogonalization_matrix_1[orthogonalization_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestOrthogonalizationMatrix::test_orthogonalization_matrix_2[orthogonalization_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestOrthogonalizationMatrix::test_orthogonalization_matrix_2[orthogonalization_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_superimposition_matrix[superimposition_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_superimposition_matrix[superimposition_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_1[euler_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_1[euler_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_2[euler_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_2[euler_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_1[euler_from_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_1[euler_from_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_2[euler_from_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_2[euler_from_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_euler_from_quaternion PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_from_euler[quaternion_from_euler0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_from_euler[quaternion_from_euler1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_about_axis[quaternion_about_axis0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_about_axis[quaternion_about_axis1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_1[quaternion_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_1[quaternion_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_2[quaternion_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_2[quaternion_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_3[quaternion_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_3[quaternion_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_1[quaternion_from_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_1[quaternion_from_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_2[quaternion_from_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_2[quaternion_from_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_3[quaternion_from_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_3[quaternion_from_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_4[quaternion_from_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_4[quaternion_from_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_5[quaternion_from_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_5[quaternion_from_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_6[quaternion_from_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_6[quaternion_from_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_multiply[quaternion_multiply0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_multiply[quaternion_multiply1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_conjugate[quaternion_conjugate0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_conjugate[quaternion_conjugate1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_inverse[quaternion_inverse0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_inverse[quaternion_inverse1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_real PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_imag PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_slerp[quaternion_slerp0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_slerp[quaternion_slerp1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_1[random_quaternion0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_1[random_quaternion1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_2[random_quaternion0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_2[random_quaternion1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_random_rotation_matrix[random_rotation_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_random_rotation_matrix[random_rotation_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[1-inverse_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[1-inverse_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[2-inverse_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[2-inverse_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[3-inverse_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[3-inverse_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[4-inverse_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[4-inverse_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[5-inverse_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[5-inverse_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[6-inverse_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[6-inverse_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse_matrix[inverse_matrix0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse_matrix[inverse_matrix1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_1[is_same_transform0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_1[is_same_transform1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_2[is_same_transform0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_2[is_same_transform1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_1[random_vector0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_1[random_vector1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_2[random_vector0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_2[random_vector1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_1[unit_vector0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_1[unit_vector1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_2[unit_vector0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_2[unit_vector1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_3[unit_vector0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_3[unit_vector1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_4[unit_vector0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_4[unit_vector1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_5[unit_vector0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_5[unit_vector1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_6[unit_vector0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_6[unit_vector1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_1[vector_norm0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_1[vector_norm1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_2[vector_norm0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_2[vector_norm1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_3[vector_norm0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_3[vector_norm1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_4[vector_norm0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_4[vector_norm1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_5[vector_norm0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_5[vector_norm1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_6[vector_norm0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_6[vector_norm1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestArcBall::test_arcball_1 PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::TestArcBall::test_arcball_2 PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_rotaxis_equal_vectors PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_transformations.py::test_rotaxis_different_vectors PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestUnitEncoding::test_unicode PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestUnitEncoding::test_unicode_encoding_with_symbol PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[N_Avogadro-6.02214129e+23] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[elementary_charge-1.602176565e-19] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[calorie-4.184] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[Boltzmann_constant-0.008314462159] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[Boltzman_constant-0.008314462159] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[electric_constant-0.00552635] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_boltzmann_typo_deprecation PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_length[12.34567-nm-A-123.4567] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_length[123.4567-Angstrom-nm-12.34567] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-ps-AKMA-20.45482949774598] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-AKMA-ps-0.04888821] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-ps-ms-1e-09] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-ms-ps-1000000000.0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-ps-us-1e-06] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_time[1-us-ps-1000000.0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_energy[1-kcal/mol-kJ/mol-4.184] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_energy[1-kcal/mol-eV-0.0433641] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_force[1-kJ/(mol*A)-J/m-1.66053892103219e-11] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_force[2.5-kJ/(mol*nm)-kJ/(mol*A)-0.25] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_force[1-kcal/(mol*Angstrom)-kJ/(mol*Angstrom)-4.184] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ps-m/s-100.0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ps-nm/ps-0.1] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ps-pm/ps-100.0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ms-A/ps-1000000000.0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/us-A/ps-1000000.0] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/fs-A/ps-0.001] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/AKMA-A/ps-20.45482949774598] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_unit_unknown[12.34567-Stone-nm] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_unit_unknown[12.34567-nm-Stone] PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_unit_unconvertable PASSED [ 99%] 2254s testsuite/MDAnalysisTests/utils/test_units.py::TestBaseUnits::test_MDANALYSIS_BASE_UNITS_correct PASSED [ 99%] 2254s testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_2D PASSED [ 99%] 2255s testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_2D_zero_return PASSED [ 99%] 2256s testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_3D PASSED [100%] 2256s 2256s = 19104 passed, 558 skipped, 2 deselected, 7 xfailed, 2 xpassed, 104648 warnings in 1661.40s (0:27:41) = 2276s 2276s DueCredit Report: 2276s - Molecular simulation analysis library / MDAnalysis (v 2.8.0) [1, 2] 2276s - Iterative Calculation of Opimal Reference / MDAnalysis.analysis.align.iterative_average (v 2.8.0) [3] 2276s - Bond-Angle-Torsions Coordinate Transformation / MDAnalysis.analysis.bat.BAT (v 2.8.0) [4] 2276s - Dielectric analysis / MDAnalysis.analysis.dielectric (v 2.8.0) [5] 2276s - DSSP algorithm description / MDAnalysis.analysis.dssp (v 2.8.0) [6] 2276s - ENCORE Ensemble Comparison / MDAnalysis.analysis.encore (v 2.8.0) [7] 2276s - Hydrogen bond analysis implementation / MDAnalysis.analysis.hydrogenbonds.hbond_analysis (v 2.8.0) [8] 2276s - Hydrogen bonding autocorrelation time / MDAnalysis.analysis.hydrogenbonds.hbond_autocorrel (v 2.8.0) [9] 2276s - LeafletFinder algorithm / MDAnalysis.analysis.leaflet (v 2.8.0) [2] 2276s - FCA fast correlation algorithm, Mean Squared Displacements with tidynamics / MDAnalysis.analysis.msd (v 2.8.0) [10, 11] 2276s - Cumulative overlap / MDAnalysis.analysis.pca (v 2.8.0) [12] 2276s - Specifications of the H5MD standard, MDAnalysis trajectory reader/writer of the H5MDformat / MDAnalysis.coordinates.H5MD (v 2.8.0, 1.1) [13, 14] 2276s - MMTF Reader / MDAnalysis.coordinates.MMTF (v 2.8.0) [15] 2276s - The TNG paper / MDAnalysis.coordinates.TNG (v 2.8.0) [16] 2276s - QCProt implementation / MDAnalysis.lib.qcprot (v 2.8.0) [17, 18] 2276s - MMTF Parser / MDAnalysis.topology.MMTFParser (v 2.8.0) [15] 2276s - Works through the orthogonal case for unwrapping, and proposes the non-orthogonal approach. / MDAnalysis.transformations.nojump (v 2.8.0) [19] 2276s - Scientific tools library / numpy (v 2.2.3) [20] 2276s 2276s 2 packages cited 2276s 16 modules cited 2276s 0 functions cited 2276s 2276s References 2276s ---------- 2276s 2276s [1] Gowers, R. et al., 2016. MDAnalysis: A Python Package for the Rapid Analysis of Molecular Dynamics Simulations. In Proceedings of the 15th Python in Science Conference. SciPy. SciPy, pp. 98–105. 2276s [2] Michaud‐Agrawal, N. et al., 2011. MDAnalysis: A toolkit for the analysis of molecular dynamics simulations. Journal of Computational Chemistry, 32(10), pp.2319–2327. 2276s [3] Linke, M., Köfinger, J. & Hummer, G., 2018. Fully Anisotropic Rotational Diffusion Tensor from Molecular Dynamics Simulations. The Journal of Physical Chemistry B, 122(21), pp.5630–5639. 2276s [4] Minh, D.D.L., 2019. Alchemical Grid Dock (AlGDock): Binding Free Energy Calculations between Flexible Ligands and Rigid Receptors. Journal of Computational Chemistry, 41(7), pp.715–730. 2276s [5] Neumann, M., 1983. Dipole moment fluctuation formulas in computer simulations of polar systems. Molecular Physics, 50(4), pp.841–858. 2276s [6] Kabsch, W. & Sander, C., 1983. Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features. Biopolymers, 22(12), pp.2577–2637. 2276s [7] Tiberti, M. et al., 2015. ENCORE: Software for Quantitative Ensemble Comparison B. L. de Groot, ed.. PLOS Computational Biology, 11(10), p.1004415. 2276s [8] Smith, P. et al., 2019. On the interaction of hyaluronic acid with synovial fluid lipid membranes. Physical Chemistry Chemical Physics, 21(19), pp.9845–9857. 2276s [9] Gowers, R.J. & Carbone, P., 2015. A multiscale approach to model hydrogen bonding: The case of polyamide. The Journal of Chemical Physics, 142(22). 2276s [10] de Buyl, P., 2018. tidynamics: A tiny package to compute the dynamics of stochastic and molecular simulations. Journal of Open Source Software, 3(28), p.877. 2276s [11] Calandrini, V. et al., 2011. nMoldyn - Interfacing spectroscopic experiments, molecular dynamics simulations and models for time correlation functions. École thématique de la Société Française de la Neutronique, 12, pp.201–232. 2276s [12] Yang, L. et al., 2008. Close Correspondence between the Motions from Principal Component Analysis of Multiple HIV-1 Protease Structures and Elastic Network Modes. Structure, 16(2), pp.321–330. 2276s [13] Jakupovic, E. & Beckstein, O., 2021. MPI-parallel Molecular Dynamics Trajectory Analysis with the H5MD Format in the MDAnalysis Python Package. In Proceedings of the 20th Python in Science Conference. SciPy. SciPy, pp. 40–48. 2276s [14] de Buyl, P., Colberg, P.H. & Höfling, F., 2014. H5MD: A structured, efficient, and portable file format for molecular data. Computer Physics Communications, 185(6), pp.1546–1553. 2276s [15] Bradley, A.R. et al., 2017. MMTF—An efficient file format for the transmission, visualization, and analysis of macromolecular structures D. Schneidman, ed.. PLOS Computational Biology, 13(6), p.1005575. 2276s [16] Lundborg, M. et al., 2013. An efficient and extensible format, library, and API for binary trajectory data from molecular simulations. Journal of Computational Chemistry, 35(3), pp.260–269. 2276s [17] Theobald, D.L., 2005. Rapid calculation of RMSDs using a quaternion-based characteristic polynomial. Acta Crystallographica Section A Foundations of Crystallography, 61(4), pp.478–480. 2276s [18] Liu, P., Agrafiotis, D.K. & Theobald, D.L., Fast determination of the optimal rotational matrix for macromolecular superpositions. Journal of Computational Chemistry, 31(7), pp.1561–1563. 2276s [19] Kulke, M. & Vermaas, J.V., 2022. Reversible Unwrapping Algorithm for Constant-Pressure Molecular Dynamics Simulations. Journal of Chemical Theory and Computation, 18(10), pp.6161–6171. 2276s [20] Van Der Walt, S., Colbert, S.C. & Varoquaux, G., 2011. The NumPy array: a structure for efficient numerical computation. Computing in Science & Engineering, 13(2), pp.22–30. 2279s autopkgtest [14:55:01]: test test-mdanalysis: -----------------------] 2285s test-mdanalysis PASS 2285s autopkgtest [14:55:07]: test test-mdanalysis: - - - - - - - - - - results - - - - - - - - - - 2289s autopkgtest [14:55:11]: @@@@@@@@@@@@@@@@@@@@ summary 2289s test-mdanalysis PASS