0s autopkgtest [23:38:23]: starting date and time: 2024-11-01 23:38:23+0000 0s autopkgtest [23:38:23]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [23:38:23]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.g3nsdvy2/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:htslib --apt-upgrade cyvcf2 --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=htslib/1.20+ds-2 -- lxd -r lxd-armhf-10.145.243.254 lxd-armhf-10.145.243.254:autopkgtest/ubuntu/plucky/armhf 51s autopkgtest [23:39:14]: testbed dpkg architecture: armhf 53s autopkgtest [23:39:16]: testbed apt version: 2.9.8 53s autopkgtest [23:39:16]: @@@@@@@@@@@@@@@@@@@@ test bed setup 60s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 61s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2639 kB] 61s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [176 kB] 61s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [41.0 kB] 61s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 61s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [207 kB] 61s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [1859 kB] 61s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [31.2 kB] 62s Fetched 5034 kB in 1s (4034 kB/s) 62s Reading package lists... 78s tee: /proc/self/fd/2: Permission denied 99s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 99s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 99s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 99s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 101s Reading package lists... 101s Reading package lists... 101s Building dependency tree... 101s Reading state information... 102s Calculating upgrade... 102s The following packages were automatically installed and are no longer required: 102s libperl5.38t64 perl-modules-5.38 102s Use 'apt autoremove' to remove them. 102s The following NEW packages will be installed: 102s libperl5.40 perl-modules-5.40 102s The following packages will be upgraded: 102s base-files distro-info-data fwupd gcc-14-base info install-info iproute2 102s libatomic1 libblockdev-crypto3 libblockdev-fs3 libblockdev-loop3 102s libblockdev-mdraid3 libblockdev-nvme3 libblockdev-part3 libblockdev-swap3 102s libblockdev-utils3 libblockdev3 libdb5.3t64 libdw1t64 libelf1t64 libevdev2 102s libftdi1-2 libfwupd2 libgcc-s1 libinih1 libkeyutils1 liblocale-gettext-perl 102s libpipeline1 libsgutils2-1.46-2 libstdc++6 libtext-charwidth-perl 102s libtext-iconv-perl motd-news-config nano perl perl-base python3-configobj 102s python3-json-pointer python3-lazr.uri sg3-utils sg3-utils-udev vim-common 102s vim-tiny xxd 102s 44 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. 102s Need to get 19.6 MB of archives. 102s After this operation, 42.8 MB of additional disk space will be used. 102s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf motd-news-config all 13.5ubuntu2 [5274 B] 102s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf base-files armhf 13.5ubuntu2 [68.6 kB] 103s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf perl-modules-5.40 all 5.40.0-6 [3214 kB] 103s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libperl5.40 armhf 5.40.0-6 [4140 kB] 103s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf perl armhf 5.40.0-6 [262 kB] 103s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf perl-base armhf 5.40.0-6 [1674 kB] 103s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf liblocale-gettext-perl armhf 1.07-7build1 [15.0 kB] 103s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf libtext-iconv-perl armhf 1.7-8build4 [12.8 kB] 103s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf libtext-charwidth-perl armhf 0.04-11build4 [9128 B] 103s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-9 [655 kB] 103s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libatomic1 armhf 14.2.0-7ubuntu1 [7842 B] 103s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-base armhf 14.2.0-7ubuntu1 [51.2 kB] 103s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++6 armhf 14.2.0-7ubuntu1 [711 kB] 103s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-s1 armhf 14.2.0-7ubuntu1 [40.8 kB] 103s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf install-info armhf 7.1.1-1 [61.4 kB] 103s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf distro-info-data all 0.63 [6588 B] 103s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf libdw1t64 armhf 0.192-4 [243 kB] 103s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf libelf1t64 armhf 0.192-4 [50.2 kB] 103s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf iproute2 armhf 6.10.0-2ubuntu1 [1082 kB] 103s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libkeyutils1 armhf 1.6.3-4ubuntu2 [8712 B] 103s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf vim-tiny armhf 2:9.1.0777-1ubuntu1 [693 kB] 103s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf vim-common all 2:9.1.0777-1ubuntu1 [394 kB] 103s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf xxd armhf 2:9.1.0777-1ubuntu1 [66.8 kB] 103s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf info armhf 7.1.1-1 [126 kB] 103s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libevdev2 armhf 1.13.3+dfsg-1 [29.7 kB] 103s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf libpipeline1 armhf 1.5.8-1 [26.9 kB] 103s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf nano armhf 8.2-1 [276 kB] 103s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf libfwupd2 armhf 1.9.26-2 [125 kB] 103s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf fwupd armhf 1.9.26-2 [4404 kB] 104s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-utils3 armhf 3.2.0-2 [17.4 kB] 104s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-crypto3 armhf 3.2.0-2 [22.3 kB] 104s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-fs3 armhf 3.2.0-2 [34.3 kB] 104s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-loop3 armhf 3.2.0-2 [6552 B] 104s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-mdraid3 armhf 3.2.0-2 [13.4 kB] 104s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-nvme3 armhf 3.2.0-2 [17.6 kB] 104s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-part3 armhf 3.2.0-2 [16.5 kB] 104s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-swap3 armhf 3.2.0-2 [8942 B] 104s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev3 armhf 3.2.0-2 [44.2 kB] 104s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libftdi1-2 armhf 1.5-7 [25.7 kB] 104s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf libinih1 armhf 58-1ubuntu1 [6750 B] 104s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf libsgutils2-1.46-2 armhf 1.46-3ubuntu5 [82.5 kB] 104s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf python3-configobj all 5.0.9-1 [33.9 kB] 104s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf python3-json-pointer all 2.4-2 [8396 B] 104s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf python3-lazr.uri all 1.0.6-4 [13.6 kB] 104s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf sg3-utils armhf 1.46-3ubuntu5 [816 kB] 104s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf sg3-utils-udev all 1.46-3ubuntu5 [5916 B] 104s Preconfiguring packages ... 104s Fetched 19.6 MB in 1s (13.3 MB/s) 104s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59386 files and directories currently installed.) 104s Preparing to unpack .../motd-news-config_13.5ubuntu2_all.deb ... 104s Unpacking motd-news-config (13.5ubuntu2) over (13.3ubuntu6) ... 104s Preparing to unpack .../base-files_13.5ubuntu2_armhf.deb ... 104s Unpacking base-files (13.5ubuntu2) over (13.3ubuntu6) ... 104s Setting up base-files (13.5ubuntu2) ... 104s Installing new version of config file /etc/issue ... 104s Installing new version of config file /etc/issue.net ... 104s Installing new version of config file /etc/lsb-release ... 105s motd-news.service is a disabled or a static unit not running, not starting it. 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59386 files and directories currently installed.) 105s Preparing to unpack .../perl_5.40.0-6_armhf.deb ... 105s Unpacking perl (5.40.0-6) over (5.38.2-5) ... 105s Selecting previously unselected package perl-modules-5.40. 105s Preparing to unpack .../perl-modules-5.40_5.40.0-6_all.deb ... 105s Unpacking perl-modules-5.40 (5.40.0-6) ... 105s Selecting previously unselected package libperl5.40:armhf. 105s Preparing to unpack .../libperl5.40_5.40.0-6_armhf.deb ... 105s Unpacking libperl5.40:armhf (5.40.0-6) ... 106s Preparing to unpack .../perl-base_5.40.0-6_armhf.deb ... 106s Unpacking perl-base (5.40.0-6) over (5.38.2-5) ... 106s Setting up perl-base (5.40.0-6) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 106s Preparing to unpack .../liblocale-gettext-perl_1.07-7build1_armhf.deb ... 106s Unpacking liblocale-gettext-perl (1.07-7build1) over (1.07-7) ... 106s Preparing to unpack .../libtext-iconv-perl_1.7-8build4_armhf.deb ... 106s Unpacking libtext-iconv-perl:armhf (1.7-8build4) over (1.7-8build3) ... 106s Preparing to unpack .../libtext-charwidth-perl_0.04-11build4_armhf.deb ... 106s Unpacking libtext-charwidth-perl:armhf (0.04-11build4) over (0.04-11build3) ... 106s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-9_armhf.deb ... 106s Unpacking libdb5.3t64:armhf (5.3.28+dfsg2-9) over (5.3.28+dfsg2-7) ... 106s Setting up libdb5.3t64:armhf (5.3.28+dfsg2-9) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 106s Preparing to unpack .../libatomic1_14.2.0-7ubuntu1_armhf.deb ... 106s Unpacking libatomic1:armhf (14.2.0-7ubuntu1) over (14.2.0-4ubuntu2) ... 106s Preparing to unpack .../gcc-14-base_14.2.0-7ubuntu1_armhf.deb ... 106s Unpacking gcc-14-base:armhf (14.2.0-7ubuntu1) over (14.2.0-4ubuntu2) ... 106s Setting up gcc-14-base:armhf (14.2.0-7ubuntu1) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 106s Preparing to unpack .../libstdc++6_14.2.0-7ubuntu1_armhf.deb ... 106s Unpacking libstdc++6:armhf (14.2.0-7ubuntu1) over (14.2.0-4ubuntu2) ... 106s Setting up libstdc++6:armhf (14.2.0-7ubuntu1) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 106s Preparing to unpack .../libgcc-s1_14.2.0-7ubuntu1_armhf.deb ... 106s Unpacking libgcc-s1:armhf (14.2.0-7ubuntu1) over (14.2.0-4ubuntu2) ... 106s Setting up libgcc-s1:armhf (14.2.0-7ubuntu1) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 106s Preparing to unpack .../install-info_7.1.1-1_armhf.deb ... 106s Unpacking install-info (7.1.1-1) over (7.1-3build2) ... 106s Setting up install-info (7.1.1-1) ... 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 107s Preparing to unpack .../00-distro-info-data_0.63_all.deb ... 107s Unpacking distro-info-data (0.63) over (0.62) ... 107s Preparing to unpack .../01-libdw1t64_0.192-4_armhf.deb ... 107s Unpacking libdw1t64:armhf (0.192-4) over (0.191-2) ... 107s Preparing to unpack .../02-libelf1t64_0.192-4_armhf.deb ... 107s Unpacking libelf1t64:armhf (0.192-4) over (0.191-2) ... 107s Preparing to unpack .../03-iproute2_6.10.0-2ubuntu1_armhf.deb ... 107s Unpacking iproute2 (6.10.0-2ubuntu1) over (6.10.0-2) ... 107s Preparing to unpack .../04-libkeyutils1_1.6.3-4ubuntu2_armhf.deb ... 107s Unpacking libkeyutils1:armhf (1.6.3-4ubuntu2) over (1.6.3-3build1) ... 107s Preparing to unpack .../05-vim-tiny_2%3a9.1.0777-1ubuntu1_armhf.deb ... 107s Unpacking vim-tiny (2:9.1.0777-1ubuntu1) over (2:9.1.0496-1ubuntu6) ... 107s Preparing to unpack .../06-vim-common_2%3a9.1.0777-1ubuntu1_all.deb ... 107s Unpacking vim-common (2:9.1.0777-1ubuntu1) over (2:9.1.0496-1ubuntu6) ... 107s Preparing to unpack .../07-xxd_2%3a9.1.0777-1ubuntu1_armhf.deb ... 107s Unpacking xxd (2:9.1.0777-1ubuntu1) over (2:9.1.0496-1ubuntu6) ... 107s Preparing to unpack .../08-info_7.1.1-1_armhf.deb ... 107s Unpacking info (7.1.1-1) over (7.1-3build2) ... 107s Preparing to unpack .../09-libevdev2_1.13.3+dfsg-1_armhf.deb ... 107s Unpacking libevdev2:armhf (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 107s Preparing to unpack .../10-libpipeline1_1.5.8-1_armhf.deb ... 107s Unpacking libpipeline1:armhf (1.5.8-1) over (1.5.7-2) ... 107s Preparing to unpack .../11-nano_8.2-1_armhf.deb ... 107s Unpacking nano (8.2-1) over (8.1-1) ... 107s Preparing to unpack .../12-libfwupd2_1.9.26-2_armhf.deb ... 107s Unpacking libfwupd2:armhf (1.9.26-2) over (1.9.24-1) ... 107s Preparing to unpack .../13-fwupd_1.9.26-2_armhf.deb ... 108s Unpacking fwupd (1.9.26-2) over (1.9.24-1) ... 108s Preparing to unpack .../14-libblockdev-utils3_3.2.0-2_armhf.deb ... 108s Unpacking libblockdev-utils3:armhf (3.2.0-2) over (3.1.1-2) ... 108s Preparing to unpack .../15-libblockdev-crypto3_3.2.0-2_armhf.deb ... 108s Unpacking libblockdev-crypto3:armhf (3.2.0-2) over (3.1.1-2) ... 108s Preparing to unpack .../16-libblockdev-fs3_3.2.0-2_armhf.deb ... 108s Unpacking libblockdev-fs3:armhf (3.2.0-2) over (3.1.1-2) ... 108s Preparing to unpack .../17-libblockdev-loop3_3.2.0-2_armhf.deb ... 108s Unpacking libblockdev-loop3:armhf (3.2.0-2) over (3.1.1-2) ... 108s Preparing to unpack .../18-libblockdev-mdraid3_3.2.0-2_armhf.deb ... 108s Unpacking libblockdev-mdraid3:armhf (3.2.0-2) over (3.1.1-2) ... 108s Preparing to unpack .../19-libblockdev-nvme3_3.2.0-2_armhf.deb ... 108s Unpacking libblockdev-nvme3:armhf (3.2.0-2) over (3.1.1-2) ... 108s Preparing to unpack .../20-libblockdev-part3_3.2.0-2_armhf.deb ... 108s Unpacking libblockdev-part3:armhf (3.2.0-2) over (3.1.1-2) ... 108s Preparing to unpack .../21-libblockdev-swap3_3.2.0-2_armhf.deb ... 108s Unpacking libblockdev-swap3:armhf (3.2.0-2) over (3.1.1-2) ... 108s Preparing to unpack .../22-libblockdev3_3.2.0-2_armhf.deb ... 108s Unpacking libblockdev3:armhf (3.2.0-2) over (3.1.1-2) ... 108s Preparing to unpack .../23-libftdi1-2_1.5-7_armhf.deb ... 108s Unpacking libftdi1-2:armhf (1.5-7) over (1.5-6build5) ... 108s Preparing to unpack .../24-libinih1_58-1ubuntu1_armhf.deb ... 108s Unpacking libinih1:armhf (58-1ubuntu1) over (55-1ubuntu2) ... 108s Preparing to unpack .../25-libsgutils2-1.46-2_1.46-3ubuntu5_armhf.deb ... 108s Unpacking libsgutils2-1.46-2:armhf (1.46-3ubuntu5) over (1.46-3ubuntu4) ... 108s Preparing to unpack .../26-python3-configobj_5.0.9-1_all.deb ... 108s Unpacking python3-configobj (5.0.9-1) over (5.0.8-3) ... 108s Preparing to unpack .../27-python3-json-pointer_2.4-2_all.deb ... 108s Unpacking python3-json-pointer (2.4-2) over (2.0-0ubuntu1) ... 108s Preparing to unpack .../28-python3-lazr.uri_1.0.6-4_all.deb ... 108s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 108s Preparing to unpack .../29-sg3-utils_1.46-3ubuntu5_armhf.deb ... 108s Unpacking sg3-utils (1.46-3ubuntu5) over (1.46-3ubuntu4) ... 108s Preparing to unpack .../30-sg3-utils-udev_1.46-3ubuntu5_all.deb ... 108s Unpacking sg3-utils-udev (1.46-3ubuntu5) over (1.46-3ubuntu4) ... 108s Setting up libpipeline1:armhf (1.5.8-1) ... 108s Setting up motd-news-config (13.5ubuntu2) ... 108s Setting up libtext-iconv-perl:armhf (1.7-8build4) ... 108s Setting up libtext-charwidth-perl:armhf (0.04-11build4) ... 108s Setting up libkeyutils1:armhf (1.6.3-4ubuntu2) ... 108s Setting up distro-info-data (0.63) ... 108s Setting up libinih1:armhf (58-1ubuntu1) ... 108s Setting up libfwupd2:armhf (1.9.26-2) ... 108s Setting up libsgutils2-1.46-2:armhf (1.46-3ubuntu5) ... 108s Setting up python3-lazr.uri (1.0.6-4) ... 109s Setting up xxd (2:9.1.0777-1ubuntu1) ... 109s Setting up libelf1t64:armhf (0.192-4) ... 109s Setting up libdw1t64:armhf (0.192-4) ... 109s Setting up libftdi1-2:armhf (1.5-7) ... 109s Setting up python3-configobj (5.0.9-1) ... 109s Setting up vim-common (2:9.1.0777-1ubuntu1) ... 109s Installing new version of config file /etc/vim/vimrc ... 109s Setting up libblockdev-utils3:armhf (3.2.0-2) ... 109s Setting up libatomic1:armhf (14.2.0-7ubuntu1) ... 109s Setting up libblockdev-nvme3:armhf (3.2.0-2) ... 109s Setting up nano (8.2-1) ... 109s Setting up libblockdev-fs3:armhf (3.2.0-2) ... 109s Setting up perl-modules-5.40 (5.40.0-6) ... 109s Setting up python3-json-pointer (2.4-2) ... 109s Setting up libevdev2:armhf (1.13.3+dfsg-1) ... 109s Setting up fwupd (1.9.26-2) ... 109s fwupd-offline-update.service is a disabled or a static unit not running, not starting it. 109s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 109s fwupd.service is a disabled or a static unit not running, not starting it. 109s Setting up info (7.1.1-1) ... 109s Setting up liblocale-gettext-perl (1.07-7build1) ... 109s Setting up sg3-utils (1.46-3ubuntu5) ... 109s Setting up libblockdev-mdraid3:armhf (3.2.0-2) ... 109s Setting up libblockdev-crypto3:armhf (3.2.0-2) ... 109s Setting up libblockdev-swap3:armhf (3.2.0-2) ... 109s Setting up iproute2 (6.10.0-2ubuntu1) ... 110s Setting up libblockdev-loop3:armhf (3.2.0-2) ... 110s Setting up vim-tiny (2:9.1.0777-1ubuntu1) ... 110s Setting up libblockdev3:armhf (3.2.0-2) ... 110s Installing new version of config file /etc/libblockdev/3/conf.d/00-default.cfg ... 110s Setting up libblockdev-part3:armhf (3.2.0-2) ... 110s Setting up sg3-utils-udev (1.46-3ubuntu5) ... 110s update-initramfs: deferring update (trigger activated) 110s Setting up libperl5.40:armhf (5.40.0-6) ... 110s Setting up perl (5.40.0-6) ... 110s Processing triggers for dbus (1.14.10-4ubuntu5) ... 110s Processing triggers for install-info (7.1.1-1) ... 110s Processing triggers for initramfs-tools (0.142ubuntu34) ... 110s Processing triggers for libc-bin (2.40-1ubuntu3) ... 110s Processing triggers for man-db (2.12.1-3) ... 111s Processing triggers for plymouth-theme-ubuntu-text (24.004.60-1ubuntu10) ... 111s update-initramfs: deferring update (trigger activated) 111s Processing triggers for initramfs-tools (0.142ubuntu34) ... 112s Reading package lists... 112s Building dependency tree... 112s Reading state information... 112s The following packages will be REMOVED: 112s libperl5.38t64* perl-modules-5.38* 113s 0 upgraded, 0 newly installed, 2 to remove and 0 not upgraded. 113s After this operation, 41.6 MB disk space will be freed. 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 113s Removing libperl5.38t64:armhf (5.38.2-5) ... 113s Removing perl-modules-5.38 (5.38.2-5) ... 113s Processing triggers for man-db (2.12.1-3) ... 113s Processing triggers for libc-bin (2.40-1ubuntu3) ... 115s autopkgtest [23:40:18]: rebooting testbed after setup commands that affected boot 183s autopkgtest [23:41:26]: testbed running kernel: Linux 6.8.0-47-generic #47~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Oct 2 16:39:14 UTC 2 210s autopkgtest [23:41:53]: @@@@@@@@@@@@@@@@@@@@ apt-source cyvcf2 220s Get:1 http://ftpmaster.internal/ubuntu plucky/universe cyvcf2 0.31.1-2 (dsc) [2337 B] 220s Get:2 http://ftpmaster.internal/ubuntu plucky/universe cyvcf2 0.31.1-2 (tar) [420 kB] 220s Get:3 http://ftpmaster.internal/ubuntu plucky/universe cyvcf2 0.31.1-2 (diff) [6764 B] 220s gpgv: Signature made Wed Jul 31 09:42:06 2024 UTC 220s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 220s gpgv: Can't check signature: No public key 220s dpkg-source: warning: cannot verify inline signature for ./cyvcf2_0.31.1-2.dsc: no acceptable signature found 220s autopkgtest [23:42:03]: testing package cyvcf2 version 0.31.1-2 222s autopkgtest [23:42:05]: build not needed 225s autopkgtest [23:42:08]: test run-unit-test: preparing testbed 234s Reading package lists... 234s Building dependency tree... 234s Reading state information... 235s Starting pkgProblemResolver with broken count: 0 235s Starting 2 pkgProblemResolver with broken count: 0 235s Done 235s The following additional packages will be installed: 235s libblas3 libdeflate0 libgfortran5 libhts3t64 libhtscodecs2 liblapack3 235s python3-all python3-click python3-colorama python3-coloredlogs 235s python3-cyvcf2 python3-humanfriendly python3-iniconfig python3-numpy 235s python3-packaging python3-pluggy python3-pytest 236s Suggested packages: 236s gcc gfortran python-numpy-doc python3-dev 236s The following NEW packages will be installed: 236s autopkgtest-satdep libblas3 libdeflate0 libgfortran5 libhts3t64 236s libhtscodecs2 liblapack3 python3-all python3-click python3-colorama 236s python3-coloredlogs python3-cyvcf2 python3-humanfriendly python3-iniconfig 236s python3-numpy python3-packaging python3-pluggy python3-pytest 236s 0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded. 236s Need to get 8034 kB/8034 kB of archives. 236s After this operation, 30.8 MB of additional disk space will be used. 236s Get:1 /tmp/autopkgtest.GpRkII/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [720 B] 236s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB] 236s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.21-1 [38.8 kB] 236s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-7ubuntu1 [311 kB] 236s Get:5 http://ftpmaster.internal/ubuntu plucky/universe armhf libhtscodecs2 armhf 1.6.0-1build1 [65.8 kB] 236s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf libhts3t64 armhf 1.20+ds-2 [394 kB] 236s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB] 236s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all armhf 3.12.6-0ubuntu1 [886 B] 236s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf python3-colorama all 0.4.6-4 [32.1 kB] 236s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf python3-click all 8.1.7-2 [79.5 kB] 236s Get:11 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-humanfriendly all 10.0-5 [70.5 kB] 236s Get:12 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-coloredlogs all 15.0.1-1 [38.2 kB] 236s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11build1 [3570 kB] 236s Get:14 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-cyvcf2 armhf 0.31.1-2 [902 kB] 237s Get:15 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 237s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf python3-packaging all 24.1-1 [41.4 kB] 237s Get:17 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 237s Get:18 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest all 8.3.2-1 [251 kB] 237s Fetched 8034 kB in 1s (8583 kB/s) 237s Selecting previously unselected package libblas3:armhf. 237s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59532 files and directories currently installed.) 237s Preparing to unpack .../00-libblas3_3.12.0-3build2_armhf.deb ... 237s Unpacking libblas3:armhf (3.12.0-3build2) ... 237s Selecting previously unselected package libdeflate0:armhf. 237s Preparing to unpack .../01-libdeflate0_1.21-1_armhf.deb ... 237s Unpacking libdeflate0:armhf (1.21-1) ... 237s Selecting previously unselected package libgfortran5:armhf. 237s Preparing to unpack .../02-libgfortran5_14.2.0-7ubuntu1_armhf.deb ... 237s Unpacking libgfortran5:armhf (14.2.0-7ubuntu1) ... 237s Selecting previously unselected package libhtscodecs2:armhf. 237s Preparing to unpack .../03-libhtscodecs2_1.6.0-1build1_armhf.deb ... 237s Unpacking libhtscodecs2:armhf (1.6.0-1build1) ... 237s Selecting previously unselected package libhts3t64:armhf. 237s Preparing to unpack .../04-libhts3t64_1.20+ds-2_armhf.deb ... 237s Unpacking libhts3t64:armhf (1.20+ds-2) ... 237s Selecting previously unselected package liblapack3:armhf. 237s Preparing to unpack .../05-liblapack3_3.12.0-3build2_armhf.deb ... 237s Unpacking liblapack3:armhf (3.12.0-3build2) ... 237s Selecting previously unselected package python3-all. 237s Preparing to unpack .../06-python3-all_3.12.6-0ubuntu1_armhf.deb ... 237s Unpacking python3-all (3.12.6-0ubuntu1) ... 237s Selecting previously unselected package python3-colorama. 237s Preparing to unpack .../07-python3-colorama_0.4.6-4_all.deb ... 237s Unpacking python3-colorama (0.4.6-4) ... 237s Selecting previously unselected package python3-click. 237s Preparing to unpack .../08-python3-click_8.1.7-2_all.deb ... 237s Unpacking python3-click (8.1.7-2) ... 237s Selecting previously unselected package python3-humanfriendly. 237s Preparing to unpack .../09-python3-humanfriendly_10.0-5_all.deb ... 237s Unpacking python3-humanfriendly (10.0-5) ... 237s Selecting previously unselected package python3-coloredlogs. 237s Preparing to unpack .../10-python3-coloredlogs_15.0.1-1_all.deb ... 237s Unpacking python3-coloredlogs (15.0.1-1) ... 237s Selecting previously unselected package python3-numpy. 237s Preparing to unpack .../11-python3-numpy_1%3a1.26.4+ds-11build1_armhf.deb ... 237s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 238s Selecting previously unselected package python3-cyvcf2. 238s Preparing to unpack .../12-python3-cyvcf2_0.31.1-2_armhf.deb ... 238s Unpacking python3-cyvcf2 (0.31.1-2) ... 238s Selecting previously unselected package python3-iniconfig. 238s Preparing to unpack .../13-python3-iniconfig_1.1.1-2_all.deb ... 238s Unpacking python3-iniconfig (1.1.1-2) ... 238s Selecting previously unselected package python3-packaging. 238s Preparing to unpack .../14-python3-packaging_24.1-1_all.deb ... 238s Unpacking python3-packaging (24.1-1) ... 238s Selecting previously unselected package python3-pluggy. 238s Preparing to unpack .../15-python3-pluggy_1.5.0-1_all.deb ... 238s Unpacking python3-pluggy (1.5.0-1) ... 238s Selecting previously unselected package python3-pytest. 238s Preparing to unpack .../16-python3-pytest_8.3.2-1_all.deb ... 238s Unpacking python3-pytest (8.3.2-1) ... 238s Selecting previously unselected package autopkgtest-satdep. 238s Preparing to unpack .../17-1-autopkgtest-satdep.deb ... 238s Unpacking autopkgtest-satdep (0) ... 238s Setting up libhtscodecs2:armhf (1.6.0-1build1) ... 238s Setting up python3-iniconfig (1.1.1-2) ... 238s Setting up python3-colorama (0.4.6-4) ... 238s Setting up libdeflate0:armhf (1.21-1) ... 238s Setting up python3-all (3.12.6-0ubuntu1) ... 238s Setting up python3-click (8.1.7-2) ... 238s Setting up libblas3:armhf (3.12.0-3build2) ... 238s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 238s Setting up python3-packaging (24.1-1) ... 238s Setting up python3-humanfriendly (10.0-5) ... 238s Setting up libgfortran5:armhf (14.2.0-7ubuntu1) ... 238s Setting up python3-pluggy (1.5.0-1) ... 239s Setting up libhts3t64:armhf (1.20+ds-2) ... 239s Setting up python3-coloredlogs (15.0.1-1) ... 239s Setting up liblapack3:armhf (3.12.0-3build2) ... 239s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 239s Setting up python3-pytest (8.3.2-1) ... 239s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 241s Setting up python3-cyvcf2 (0.31.1-2) ... 241s Setting up autopkgtest-satdep (0) ... 241s Processing triggers for man-db (2.12.1-3) ... 242s Processing triggers for libc-bin (2.40-1ubuntu3) ... 253s (Reading database ... 60799 files and directories currently installed.) 253s Removing autopkgtest-satdep (0) ... 258s autopkgtest [23:42:41]: test run-unit-test: [----------------------- 260s Testing with python3.12 in /tmp/autopkgtest.GpRkII/autopkgtest_tmp: 261s ============================= test session starts ============================== 261s platform linux -- Python 3.12.7, pytest-8.3.2, pluggy-1.5.0 -- /usr/bin/python3.12 261s cachedir: .pytest_cache 261s rootdir: /tmp/autopkgtest.GpRkII/autopkgtest_tmp 261s plugins: typeguard-4.3.0 261s collecting ... collected 112 items 261s 261s cyvcf2/tests/test_cli.py::test_version PASSED [ 0%] 261s cyvcf2/tests/test_hemi.py::test_hemi PASSED [ 1%] 261s cyvcf2/tests/test_reader.py::test_init PASSED [ 2%] 261s 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cyvcf2/tests/test_reader.py::test_access_genotype_array PASSED [ 57%] 262s cyvcf2/tests/test_reader.py::test_alt_homozygous_gt PASSED [ 58%] 262s cyvcf2/tests/test_reader.py::test_write_missing_contig PASSED [ 58%] 262s cyvcf2/tests/test_reader.py::test_set_samples PASSED [ 59%] 262s cyvcf2/tests/test_reader.py::test_hrec PASSED [ 60%] 262s cyvcf2/tests/test_reader.py::test_issue44 PASSED [ 61%] 262s cyvcf2/tests/test_reader.py::test_id_field_updates PASSED [ 62%] 262s cyvcf2/tests/test_reader.py::test_set_pos PASSED [ 63%] 262s cyvcf2/tests/test_reader.py::test_set_chrom_when_contig_not_in_header PASSED [ 64%] 262s cyvcf2/tests/test_reader.py::test_set_chrom_after_contig_is_added_to_header PASSED [ 65%] 262s cyvcf2/tests/test_reader.py::test_set_qual PASSED [ 66%] 262s cyvcf2/tests/test_reader.py::test_strict_gt_option_flag PASSED [ 66%] 262s cyvcf2/tests/test_reader.py::test_alt_repr PASSED [ 67%] 262s cyvcf2/tests/test_reader.py::test_closed_iter PASSED [ 68%] 262s cyvcf2/tests/test_reader.py::test_issue72 PASSED [ 69%] 262s cyvcf2/tests/test_reader.py::test_is_transition PASSED [ 70%] 262s cyvcf2/tests/test_reader.py::test_decomposed PASSED [ 71%] 262s cyvcf2/tests/test_reader.py::test_fd PASSED [ 72%] 262s cyvcf2/tests/test_reader.py::test_set_reference PASSED [ 73%] 262s cyvcf2/tests/test_reader.py::test_set_alternates PASSED [ 74%] 262s cyvcf2/tests/test_reader.py::test_no_seqlen PASSED [ 75%] 262s cyvcf2/tests/test_reader.py::test_set_unknown_format PASSED [ 75%] 262s cyvcf2/tests/test_reader.py::test_invalid_header PASSED [ 76%] 262s cyvcf2/tests/test_reader.py::test_genotypes PASSED [ 77%] 262s cyvcf2/tests/test_reader.py::test_issue236 PASSED [ 78%] 262s cyvcf2/tests/test_reader.py::test_issue17_no_gt PASSED [ 79%] 262s cyvcf2/tests/test_reader.py::test_num_records_indexed[test.vcf.gz] PASSED [ 80%] 262s cyvcf2/tests/test_reader.py::test_num_records_indexed[test-multiallelic-homozygous-alt.vcf.gz] PASSED [ 81%] 262s cyvcf2/tests/test_reader.py::test_num_records_indexed[test-strict-gt-option-flag.vcf.gz0] PASSED [ 82%] 262s cyvcf2/tests/test_reader.py::test_num_records_indexed[test-strict-gt-option-flag.vcf.gz1] PASSED [ 83%] 262s cyvcf2/tests/test_reader.py::test_num_records_indexed[multi-contig.vcf.gz] PASSED [ 83%] 262s cyvcf2/tests/test_reader.py::test_num_records_indexed[multi-contig.bcf] PASSED [ 84%] 262s cyvcf2/tests/test_reader.py::test_num_records_indexed[test.snpeff.bcf] PASSED [ 85%] 262s cyvcf2/tests/test_reader.py::test_num_records_indexed_csi_tabix[csi] PASSED [ 86%] 262s cyvcf2/tests/test_reader.py::test_num_records_indexed_csi_tabix[tbi] PASSED [ 87%] 262s cyvcf2/tests/test_reader.py::test_num_records_set_index_multiple_times PASSED [ 88%] 262s cyvcf2/tests/test_reader.py::test_num_records_set_wrong_index PASSED [ 89%] 262s cyvcf2/tests/test_reader.py::test_num_records_no_index[test-genotypes.vcf] PASSED [ 90%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_defaultModeWithVcfFname_returnsUncompressedVcf PASSED [ 91%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_defaultModeWithBcfFname_returnsCompressedBcf PASSED [ 91%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_defaultModeWithBcfFnameAndUncompressedMode_returnsUncompressedBcf PASSED [ 92%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_defaultModeWithCompressedBcfFname_returnsCompressedBcf PASSED [ 93%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_defaultModeWithCompressedVcfFname_returnsCompressedVcf PASSED [ 94%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_defaultModeWithStdOut_returnsUncompressedVcf PASSED [ 95%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_defaultModeWithNonVcfName_returnsUncompressedVcf PASSED [ 96%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_defaultModeWithIntFname_returnsUncompressedVcf PASSED [ 97%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_defaultModeWithHandle_returnsUncompressedVcf PASSED [ 98%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_defaultModeWithPosixPath_returnsUncompressedVcf PASSED [ 99%] 262s cyvcf2/tests/test_writer.py::TestFileModeInference::test_explicitMode_doesNotInferFromFname PASSED [100%] 262s 262s ============================= 112 passed in 1.49s ============================== 263s autopkgtest [23:42:46]: test run-unit-test: -----------------------] 266s autopkgtest [23:42:49]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 266s run-unit-test PASS 270s autopkgtest [23:42:53]: test autodep8-python3: preparing testbed 323s autopkgtest [23:43:46]: testbed dpkg architecture: armhf 325s autopkgtest [23:43:48]: testbed apt version: 2.9.8 325s autopkgtest [23:43:48]: @@@@@@@@@@@@@@@@@@@@ test bed setup 333s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 333s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [41.0 kB] 333s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [176 kB] 333s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 333s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2639 kB] 333s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [207 kB] 333s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [1859 kB] 334s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [31.2 kB] 334s Fetched 5034 kB in 1s (3769 kB/s) 334s Reading package lists... 349s tee: /proc/self/fd/2: Permission denied 370s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 370s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 370s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 370s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 371s Reading package lists... 371s Reading package lists... 372s Building dependency tree... 372s Reading state information... 372s Calculating upgrade... 373s The following packages were automatically installed and are no longer required: 373s libperl5.38t64 perl-modules-5.38 373s Use 'apt autoremove' to remove them. 373s The following NEW packages will be installed: 373s libperl5.40 perl-modules-5.40 373s The following packages will be upgraded: 373s base-files distro-info-data fwupd gcc-14-base info install-info iproute2 373s libatomic1 libblockdev-crypto3 libblockdev-fs3 libblockdev-loop3 373s libblockdev-mdraid3 libblockdev-nvme3 libblockdev-part3 libblockdev-swap3 373s libblockdev-utils3 libblockdev3 libdb5.3t64 libdw1t64 libelf1t64 libevdev2 373s libftdi1-2 libfwupd2 libgcc-s1 libinih1 libkeyutils1 liblocale-gettext-perl 373s libpipeline1 libsgutils2-1.46-2 libstdc++6 libtext-charwidth-perl 373s libtext-iconv-perl motd-news-config nano perl perl-base python3-configobj 373s python3-json-pointer python3-lazr.uri sg3-utils sg3-utils-udev vim-common 373s vim-tiny xxd 373s 44 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. 373s Need to get 19.6 MB of archives. 373s After this operation, 42.8 MB of additional disk space will be used. 373s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf motd-news-config all 13.5ubuntu2 [5274 B] 373s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf base-files armhf 13.5ubuntu2 [68.6 kB] 373s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf perl-modules-5.40 all 5.40.0-6 [3214 kB] 374s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libperl5.40 armhf 5.40.0-6 [4140 kB] 374s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf perl armhf 5.40.0-6 [262 kB] 374s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf perl-base armhf 5.40.0-6 [1674 kB] 374s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf liblocale-gettext-perl armhf 1.07-7build1 [15.0 kB] 374s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf libtext-iconv-perl armhf 1.7-8build4 [12.8 kB] 374s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf libtext-charwidth-perl armhf 0.04-11build4 [9128 B] 374s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-9 [655 kB] 374s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libatomic1 armhf 14.2.0-7ubuntu1 [7842 B] 374s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-base armhf 14.2.0-7ubuntu1 [51.2 kB] 374s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++6 armhf 14.2.0-7ubuntu1 [711 kB] 374s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-s1 armhf 14.2.0-7ubuntu1 [40.8 kB] 374s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf install-info armhf 7.1.1-1 [61.4 kB] 374s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf distro-info-data all 0.63 [6588 B] 374s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf libdw1t64 armhf 0.192-4 [243 kB] 374s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf libelf1t64 armhf 0.192-4 [50.2 kB] 374s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf iproute2 armhf 6.10.0-2ubuntu1 [1082 kB] 374s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libkeyutils1 armhf 1.6.3-4ubuntu2 [8712 B] 374s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf vim-tiny armhf 2:9.1.0777-1ubuntu1 [693 kB] 374s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf vim-common all 2:9.1.0777-1ubuntu1 [394 kB] 374s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf xxd armhf 2:9.1.0777-1ubuntu1 [66.8 kB] 374s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf info armhf 7.1.1-1 [126 kB] 374s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libevdev2 armhf 1.13.3+dfsg-1 [29.7 kB] 374s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf libpipeline1 armhf 1.5.8-1 [26.9 kB] 374s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf nano armhf 8.2-1 [276 kB] 374s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf libfwupd2 armhf 1.9.26-2 [125 kB] 374s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf fwupd armhf 1.9.26-2 [4404 kB] 374s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-utils3 armhf 3.2.0-2 [17.4 kB] 374s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-crypto3 armhf 3.2.0-2 [22.3 kB] 374s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-fs3 armhf 3.2.0-2 [34.3 kB] 374s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-loop3 armhf 3.2.0-2 [6552 B] 374s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-mdraid3 armhf 3.2.0-2 [13.4 kB] 374s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-nvme3 armhf 3.2.0-2 [17.6 kB] 374s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-part3 armhf 3.2.0-2 [16.5 kB] 374s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-swap3 armhf 3.2.0-2 [8942 B] 374s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev3 armhf 3.2.0-2 [44.2 kB] 374s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libftdi1-2 armhf 1.5-7 [25.7 kB] 374s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf libinih1 armhf 58-1ubuntu1 [6750 B] 374s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf libsgutils2-1.46-2 armhf 1.46-3ubuntu5 [82.5 kB] 374s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf python3-configobj all 5.0.9-1 [33.9 kB] 374s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf python3-json-pointer all 2.4-2 [8396 B] 374s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf python3-lazr.uri all 1.0.6-4 [13.6 kB] 374s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf sg3-utils armhf 1.46-3ubuntu5 [816 kB] 374s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf sg3-utils-udev all 1.46-3ubuntu5 [5916 B] 375s Preconfiguring packages ... 375s Fetched 19.6 MB in 1s (14.5 MB/s) 375s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59386 files and directories currently installed.) 375s Preparing to unpack .../motd-news-config_13.5ubuntu2_all.deb ... 375s Unpacking motd-news-config (13.5ubuntu2) over (13.3ubuntu6) ... 375s Preparing to unpack .../base-files_13.5ubuntu2_armhf.deb ... 375s Unpacking base-files (13.5ubuntu2) over (13.3ubuntu6) ... 375s Setting up base-files (13.5ubuntu2) ... 375s Installing new version of config file /etc/issue ... 375s Installing new version of config file /etc/issue.net ... 375s Installing new version of config file /etc/lsb-release ... 376s motd-news.service is a disabled or a static unit not running, not starting it. 376s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59386 files and directories currently installed.) 376s Preparing to unpack .../perl_5.40.0-6_armhf.deb ... 376s Unpacking perl (5.40.0-6) over (5.38.2-5) ... 376s Selecting previously unselected package perl-modules-5.40. 376s Preparing to unpack .../perl-modules-5.40_5.40.0-6_all.deb ... 376s Unpacking perl-modules-5.40 (5.40.0-6) ... 376s Selecting previously unselected package libperl5.40:armhf. 376s Preparing to unpack .../libperl5.40_5.40.0-6_armhf.deb ... 376s Unpacking libperl5.40:armhf (5.40.0-6) ... 376s Preparing to unpack .../perl-base_5.40.0-6_armhf.deb ... 376s Unpacking perl-base (5.40.0-6) over (5.38.2-5) ... 377s Setting up perl-base (5.40.0-6) ... 377s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 377s Preparing to unpack .../liblocale-gettext-perl_1.07-7build1_armhf.deb ... 377s Unpacking liblocale-gettext-perl (1.07-7build1) over (1.07-7) ... 377s Preparing to unpack .../libtext-iconv-perl_1.7-8build4_armhf.deb ... 377s Unpacking libtext-iconv-perl:armhf (1.7-8build4) over (1.7-8build3) ... 377s Preparing to unpack .../libtext-charwidth-perl_0.04-11build4_armhf.deb ... 377s Unpacking libtext-charwidth-perl:armhf (0.04-11build4) over (0.04-11build3) ... 377s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-9_armhf.deb ... 377s Unpacking libdb5.3t64:armhf (5.3.28+dfsg2-9) over (5.3.28+dfsg2-7) ... 377s Setting up libdb5.3t64:armhf (5.3.28+dfsg2-9) ... 377s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 377s Preparing to unpack .../libatomic1_14.2.0-7ubuntu1_armhf.deb ... 377s Unpacking libatomic1:armhf (14.2.0-7ubuntu1) over (14.2.0-4ubuntu2) ... 377s Preparing to unpack .../gcc-14-base_14.2.0-7ubuntu1_armhf.deb ... 377s Unpacking gcc-14-base:armhf (14.2.0-7ubuntu1) over (14.2.0-4ubuntu2) ... 377s Setting up gcc-14-base:armhf (14.2.0-7ubuntu1) ... 377s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 377s Preparing to unpack .../libstdc++6_14.2.0-7ubuntu1_armhf.deb ... 377s Unpacking libstdc++6:armhf (14.2.0-7ubuntu1) over (14.2.0-4ubuntu2) ... 377s Setting up libstdc++6:armhf (14.2.0-7ubuntu1) ... 377s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 377s Preparing to unpack .../libgcc-s1_14.2.0-7ubuntu1_armhf.deb ... 377s Unpacking libgcc-s1:armhf (14.2.0-7ubuntu1) over (14.2.0-4ubuntu2) ... 377s Setting up libgcc-s1:armhf (14.2.0-7ubuntu1) ... 377s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 377s Preparing to unpack .../install-info_7.1.1-1_armhf.deb ... 377s Unpacking install-info (7.1.1-1) over (7.1-3build2) ... 377s Setting up install-info (7.1.1-1) ... 377s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 377s Preparing to unpack .../00-distro-info-data_0.63_all.deb ... 377s Unpacking distro-info-data (0.63) over (0.62) ... 377s Preparing to unpack .../01-libdw1t64_0.192-4_armhf.deb ... 377s Unpacking libdw1t64:armhf (0.192-4) over (0.191-2) ... 377s Preparing to unpack .../02-libelf1t64_0.192-4_armhf.deb ... 377s Unpacking libelf1t64:armhf (0.192-4) over (0.191-2) ... 377s Preparing to unpack .../03-iproute2_6.10.0-2ubuntu1_armhf.deb ... 377s Unpacking iproute2 (6.10.0-2ubuntu1) over (6.10.0-2) ... 378s Preparing to unpack .../04-libkeyutils1_1.6.3-4ubuntu2_armhf.deb ... 378s Unpacking libkeyutils1:armhf (1.6.3-4ubuntu2) over (1.6.3-3build1) ... 378s Preparing to unpack .../05-vim-tiny_2%3a9.1.0777-1ubuntu1_armhf.deb ... 378s Unpacking vim-tiny (2:9.1.0777-1ubuntu1) over (2:9.1.0496-1ubuntu6) ... 378s Preparing to unpack .../06-vim-common_2%3a9.1.0777-1ubuntu1_all.deb ... 378s Unpacking vim-common (2:9.1.0777-1ubuntu1) over (2:9.1.0496-1ubuntu6) ... 378s Preparing to unpack .../07-xxd_2%3a9.1.0777-1ubuntu1_armhf.deb ... 378s Unpacking xxd (2:9.1.0777-1ubuntu1) over (2:9.1.0496-1ubuntu6) ... 378s Preparing to unpack .../08-info_7.1.1-1_armhf.deb ... 378s Unpacking info (7.1.1-1) over (7.1-3build2) ... 378s Preparing to unpack .../09-libevdev2_1.13.3+dfsg-1_armhf.deb ... 378s Unpacking libevdev2:armhf (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 378s Preparing to unpack .../10-libpipeline1_1.5.8-1_armhf.deb ... 378s Unpacking libpipeline1:armhf (1.5.8-1) over (1.5.7-2) ... 378s Preparing to unpack .../11-nano_8.2-1_armhf.deb ... 378s Unpacking nano (8.2-1) over (8.1-1) ... 378s Preparing to unpack .../12-libfwupd2_1.9.26-2_armhf.deb ... 378s Unpacking libfwupd2:armhf (1.9.26-2) over (1.9.24-1) ... 378s Preparing to unpack .../13-fwupd_1.9.26-2_armhf.deb ... 378s Unpacking fwupd (1.9.26-2) over (1.9.24-1) ... 378s Preparing to unpack .../14-libblockdev-utils3_3.2.0-2_armhf.deb ... 378s Unpacking libblockdev-utils3:armhf (3.2.0-2) over (3.1.1-2) ... 378s Preparing to unpack .../15-libblockdev-crypto3_3.2.0-2_armhf.deb ... 378s Unpacking libblockdev-crypto3:armhf (3.2.0-2) over (3.1.1-2) ... 378s Preparing to unpack .../16-libblockdev-fs3_3.2.0-2_armhf.deb ... 378s Unpacking libblockdev-fs3:armhf (3.2.0-2) over (3.1.1-2) ... 378s Preparing to unpack .../17-libblockdev-loop3_3.2.0-2_armhf.deb ... 378s Unpacking libblockdev-loop3:armhf (3.2.0-2) over (3.1.1-2) ... 378s Preparing to unpack .../18-libblockdev-mdraid3_3.2.0-2_armhf.deb ... 378s Unpacking libblockdev-mdraid3:armhf (3.2.0-2) over (3.1.1-2) ... 378s Preparing to unpack .../19-libblockdev-nvme3_3.2.0-2_armhf.deb ... 378s Unpacking libblockdev-nvme3:armhf (3.2.0-2) over (3.1.1-2) ... 378s Preparing to unpack .../20-libblockdev-part3_3.2.0-2_armhf.deb ... 378s Unpacking libblockdev-part3:armhf (3.2.0-2) over (3.1.1-2) ... 378s Preparing to unpack .../21-libblockdev-swap3_3.2.0-2_armhf.deb ... 378s Unpacking libblockdev-swap3:armhf (3.2.0-2) over (3.1.1-2) ... 378s Preparing to unpack .../22-libblockdev3_3.2.0-2_armhf.deb ... 378s Unpacking libblockdev3:armhf (3.2.0-2) over (3.1.1-2) ... 378s Preparing to unpack .../23-libftdi1-2_1.5-7_armhf.deb ... 378s Unpacking libftdi1-2:armhf (1.5-7) over (1.5-6build5) ... 378s Preparing to unpack .../24-libinih1_58-1ubuntu1_armhf.deb ... 378s Unpacking libinih1:armhf (58-1ubuntu1) over (55-1ubuntu2) ... 379s Preparing to unpack .../25-libsgutils2-1.46-2_1.46-3ubuntu5_armhf.deb ... 379s Unpacking libsgutils2-1.46-2:armhf (1.46-3ubuntu5) over (1.46-3ubuntu4) ... 379s Preparing to unpack .../26-python3-configobj_5.0.9-1_all.deb ... 379s Unpacking python3-configobj (5.0.9-1) over (5.0.8-3) ... 379s Preparing to unpack .../27-python3-json-pointer_2.4-2_all.deb ... 379s Unpacking python3-json-pointer (2.4-2) over (2.0-0ubuntu1) ... 379s Preparing to unpack .../28-python3-lazr.uri_1.0.6-4_all.deb ... 379s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 379s Preparing to unpack .../29-sg3-utils_1.46-3ubuntu5_armhf.deb ... 379s Unpacking sg3-utils (1.46-3ubuntu5) over (1.46-3ubuntu4) ... 379s Preparing to unpack .../30-sg3-utils-udev_1.46-3ubuntu5_all.deb ... 379s Unpacking sg3-utils-udev (1.46-3ubuntu5) over (1.46-3ubuntu4) ... 379s Setting up libpipeline1:armhf (1.5.8-1) ... 379s Setting up motd-news-config (13.5ubuntu2) ... 379s Setting up libtext-iconv-perl:armhf (1.7-8build4) ... 379s Setting up libtext-charwidth-perl:armhf (0.04-11build4) ... 379s Setting up libkeyutils1:armhf (1.6.3-4ubuntu2) ... 379s Setting up distro-info-data (0.63) ... 379s Setting up libinih1:armhf (58-1ubuntu1) ... 379s Setting up libfwupd2:armhf (1.9.26-2) ... 379s Setting up libsgutils2-1.46-2:armhf (1.46-3ubuntu5) ... 379s Setting up python3-lazr.uri (1.0.6-4) ... 379s Setting up xxd (2:9.1.0777-1ubuntu1) ... 379s Setting up libelf1t64:armhf (0.192-4) ... 379s Setting up libdw1t64:armhf (0.192-4) ... 379s Setting up libftdi1-2:armhf (1.5-7) ... 379s Setting up python3-configobj (5.0.9-1) ... 379s Setting up vim-common (2:9.1.0777-1ubuntu1) ... 379s Installing new version of config file /etc/vim/vimrc ... 379s Setting up libblockdev-utils3:armhf (3.2.0-2) ... 379s Setting up libatomic1:armhf (14.2.0-7ubuntu1) ... 379s Setting up libblockdev-nvme3:armhf (3.2.0-2) ... 379s Setting up nano (8.2-1) ... 379s Setting up libblockdev-fs3:armhf (3.2.0-2) ... 379s Setting up perl-modules-5.40 (5.40.0-6) ... 379s Setting up python3-json-pointer (2.4-2) ... 379s Setting up libevdev2:armhf (1.13.3+dfsg-1) ... 379s Setting up fwupd (1.9.26-2) ... 380s fwupd-offline-update.service is a disabled or a static unit not running, not starting it. 380s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 380s fwupd.service is a disabled or a static unit not running, not starting it. 380s Setting up info (7.1.1-1) ... 380s Setting up liblocale-gettext-perl (1.07-7build1) ... 380s Setting up sg3-utils (1.46-3ubuntu5) ... 380s Setting up libblockdev-mdraid3:armhf (3.2.0-2) ... 380s Setting up libblockdev-crypto3:armhf (3.2.0-2) ... 380s Setting up libblockdev-swap3:armhf (3.2.0-2) ... 380s Setting up iproute2 (6.10.0-2ubuntu1) ... 380s Setting up libblockdev-loop3:armhf (3.2.0-2) ... 380s Setting up vim-tiny (2:9.1.0777-1ubuntu1) ... 380s Setting up libblockdev3:armhf (3.2.0-2) ... 380s Installing new version of config file /etc/libblockdev/3/conf.d/00-default.cfg ... 380s Setting up libblockdev-part3:armhf (3.2.0-2) ... 380s Setting up sg3-utils-udev (1.46-3ubuntu5) ... 380s update-initramfs: deferring update (trigger activated) 380s Setting up libperl5.40:armhf (5.40.0-6) ... 380s Setting up perl (5.40.0-6) ... 380s Processing triggers for dbus (1.14.10-4ubuntu5) ... 380s Processing triggers for install-info (7.1.1-1) ... 380s Processing triggers for initramfs-tools (0.142ubuntu34) ... 380s Processing triggers for libc-bin (2.40-1ubuntu3) ... 380s Processing triggers for man-db (2.12.1-3) ... 382s Processing triggers for plymouth-theme-ubuntu-text (24.004.60-1ubuntu10) ... 382s update-initramfs: deferring update (trigger activated) 382s Processing triggers for initramfs-tools (0.142ubuntu34) ... 382s Reading package lists... 382s Building dependency tree... 382s Reading state information... 383s The following packages will be REMOVED: 383s libperl5.38t64* perl-modules-5.38* 383s 0 upgraded, 0 newly installed, 2 to remove and 0 not upgraded. 383s After this operation, 41.6 MB disk space will be freed. 383s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61462 files and directories currently installed.) 383s Removing libperl5.38t64:armhf (5.38.2-5) ... 383s Removing perl-modules-5.38 (5.38.2-5) ... 383s Processing triggers for man-db (2.12.1-3) ... 384s Processing triggers for libc-bin (2.40-1ubuntu3) ... 386s autopkgtest [23:44:49]: rebooting testbed after setup commands that affected boot 488s Reading package lists... 488s Building dependency tree... 488s Reading state information... 488s Starting pkgProblemResolver with broken count: 0 488s Starting 2 pkgProblemResolver with broken count: 0 488s Done 489s The following additional packages will be installed: 489s libblas3 libdeflate0 libgfortran5 libhts3t64 libhtscodecs2 liblapack3 489s python3-all python3-click python3-colorama python3-coloredlogs 489s python3-cyvcf2 python3-humanfriendly python3-numpy 489s Suggested packages: 489s gcc gfortran python-numpy-doc python3-dev python3-pytest 489s The following NEW packages will be installed: 489s autopkgtest-satdep libblas3 libdeflate0 libgfortran5 libhts3t64 489s libhtscodecs2 liblapack3 python3-all python3-click python3-colorama 489s python3-coloredlogs python3-cyvcf2 python3-humanfriendly python3-numpy 489s 0 upgraded, 14 newly installed, 0 to remove and 0 not upgraded. 489s Need to get 7714 kB/7715 kB of archives. 489s After this operation, 29.2 MB of additional disk space will be used. 489s Get:1 /tmp/autopkgtest.GpRkII/2-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [712 B] 489s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB] 490s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.21-1 [38.8 kB] 490s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-7ubuntu1 [311 kB] 490s Get:5 http://ftpmaster.internal/ubuntu plucky/universe armhf libhtscodecs2 armhf 1.6.0-1build1 [65.8 kB] 490s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf libhts3t64 armhf 1.20+ds-2 [394 kB] 490s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB] 490s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all armhf 3.12.6-0ubuntu1 [886 B] 490s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf python3-colorama all 0.4.6-4 [32.1 kB] 490s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf python3-click all 8.1.7-2 [79.5 kB] 490s Get:11 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-humanfriendly all 10.0-5 [70.5 kB] 490s Get:12 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-coloredlogs all 15.0.1-1 [38.2 kB] 490s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11build1 [3570 kB] 490s Get:14 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-cyvcf2 armhf 0.31.1-2 [902 kB] 491s Fetched 7714 kB in 1s (7800 kB/s) 491s Selecting previously unselected package libblas3:armhf. 491s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59532 files and directories currently installed.) 491s Preparing to unpack .../00-libblas3_3.12.0-3build2_armhf.deb ... 491s Unpacking libblas3:armhf (3.12.0-3build2) ... 491s Selecting previously unselected package libdeflate0:armhf. 491s Preparing to unpack .../01-libdeflate0_1.21-1_armhf.deb ... 491s Unpacking libdeflate0:armhf (1.21-1) ... 491s Selecting previously unselected package libgfortran5:armhf. 491s Preparing to unpack .../02-libgfortran5_14.2.0-7ubuntu1_armhf.deb ... 491s Unpacking libgfortran5:armhf (14.2.0-7ubuntu1) ... 491s Selecting previously unselected package libhtscodecs2:armhf. 491s Preparing to unpack .../03-libhtscodecs2_1.6.0-1build1_armhf.deb ... 491s Unpacking libhtscodecs2:armhf (1.6.0-1build1) ... 491s Selecting previously unselected package libhts3t64:armhf. 491s Preparing to unpack .../04-libhts3t64_1.20+ds-2_armhf.deb ... 491s Unpacking libhts3t64:armhf (1.20+ds-2) ... 491s Selecting previously unselected package liblapack3:armhf. 491s Preparing to unpack .../05-liblapack3_3.12.0-3build2_armhf.deb ... 491s Unpacking liblapack3:armhf (3.12.0-3build2) ... 491s Selecting previously unselected package python3-all. 491s Preparing to unpack .../06-python3-all_3.12.6-0ubuntu1_armhf.deb ... 491s Unpacking python3-all (3.12.6-0ubuntu1) ... 491s Selecting previously unselected package python3-colorama. 491s Preparing to unpack .../07-python3-colorama_0.4.6-4_all.deb ... 491s Unpacking python3-colorama (0.4.6-4) ... 491s Selecting previously unselected package python3-click. 491s Preparing to unpack .../08-python3-click_8.1.7-2_all.deb ... 491s Unpacking python3-click (8.1.7-2) ... 491s Selecting previously unselected package python3-humanfriendly. 491s Preparing to unpack .../09-python3-humanfriendly_10.0-5_all.deb ... 491s Unpacking python3-humanfriendly (10.0-5) ... 491s Selecting previously unselected package python3-coloredlogs. 491s Preparing to unpack .../10-python3-coloredlogs_15.0.1-1_all.deb ... 491s Unpacking python3-coloredlogs (15.0.1-1) ... 491s Selecting previously unselected package python3-numpy. 491s Preparing to unpack .../11-python3-numpy_1%3a1.26.4+ds-11build1_armhf.deb ... 491s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 491s Selecting previously unselected package python3-cyvcf2. 491s Preparing to unpack .../12-python3-cyvcf2_0.31.1-2_armhf.deb ... 491s Unpacking python3-cyvcf2 (0.31.1-2) ... 491s Selecting previously unselected package autopkgtest-satdep. 491s Preparing to unpack .../13-2-autopkgtest-satdep.deb ... 491s Unpacking autopkgtest-satdep (0) ... 491s Setting up libhtscodecs2:armhf (1.6.0-1build1) ... 491s Setting up python3-colorama (0.4.6-4) ... 491s Setting up libdeflate0:armhf (1.21-1) ... 491s Setting up python3-all (3.12.6-0ubuntu1) ... 491s Setting up python3-click (8.1.7-2) ... 492s Setting up libblas3:armhf (3.12.0-3build2) ... 492s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 492s Setting up python3-humanfriendly (10.0-5) ... 492s Setting up libgfortran5:armhf (14.2.0-7ubuntu1) ... 492s Setting up libhts3t64:armhf (1.20+ds-2) ... 492s Setting up python3-coloredlogs (15.0.1-1) ... 492s Setting up liblapack3:armhf (3.12.0-3build2) ... 492s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 492s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 494s Setting up python3-cyvcf2 (0.31.1-2) ... 494s Setting up autopkgtest-satdep (0) ... 494s Processing triggers for man-db (2.12.1-3) ... 494s Processing triggers for libc-bin (2.40-1ubuntu3) ... 506s (Reading database ... 60635 files and directories currently installed.) 506s Removing autopkgtest-satdep (0) ... 519s autopkgtest [23:47:02]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import cyvcf2; print(cyvcf2)" ; done 519s autopkgtest [23:47:02]: test autodep8-python3: [----------------------- 521s Testing with python3.12: 521s 522s autopkgtest [23:47:05]: test autodep8-python3: -----------------------] 526s autodep8-python3 PASS (superficial) 526s autopkgtest [23:47:09]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 529s autopkgtest [23:47:12]: @@@@@@@@@@@@@@@@@@@@ summary 529s run-unit-test PASS 529s autodep8-python3 PASS (superficial)