0s autopkgtest [01:27:32]: starting date and time: 2025-03-16 01:27:32+0000 0s autopkgtest [01:27:32]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [01:27:32]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.zu1mwzph/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:scikit-learn --apt-upgrade cnvkit --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=scikit-learn/1.4.2+dfsg-8 -- lxd -r lxd-armhf-10.145.243.28 lxd-armhf-10.145.243.28:autopkgtest/ubuntu/plucky/armhf 23s autopkgtest [01:27:55]: testbed dpkg architecture: armhf 25s autopkgtest [01:27:57]: testbed apt version: 2.9.33 29s autopkgtest [01:28:01]: @@@@@@@@@@@@@@@@@@@@ test bed setup 31s autopkgtest [01:28:03]: testbed release detected to be: None 39s autopkgtest [01:28:11]: updating testbed package index (apt update) 41s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 41s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 42s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 42s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 42s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.7 kB] 42s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [365 kB] 43s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [41.4 kB] 43s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [74.9 kB] 43s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1792 B] 43s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 43s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [290 kB] 43s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [10.5 kB] 43s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [4168 B] 43s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [240 B] 43s Get:15 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 43s Get:16 http://ftpmaster.internal/ubuntu plucky/main Sources [1389 kB] 45s Get:17 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 64s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 65s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.5 kB] 65s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 65s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.3 MB] 80s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 82s Fetched 41.1 MB in 40s (1019 kB/s) 83s Reading package lists... 89s autopkgtest [01:29:01]: upgrading testbed (apt dist-upgrade and autopurge) 91s Reading package lists... 91s Building dependency tree... 91s Reading state information... 92s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 92s Starting 2 pkgProblemResolver with broken count: 0 92s Done 94s Entering ResolveByKeep 94s 94s Calculating upgrade... 95s The following packages will be upgraded: 95s pinentry-curses python3-jinja2 sos strace 95s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 95s Need to get 960 kB of archives. 95s After this operation, 23.6 kB of additional disk space will be used. 95s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 96s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf pinentry-curses armhf 1.3.1-2ubuntu3 [40.6 kB] 96s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 96s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 97s Fetched 960 kB in 1s (746 kB/s) 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 97s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 97s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 97s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_armhf.deb ... 97s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 97s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 97s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 97s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 98s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 98s Setting up sos (4.9.0-5) ... 99s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 99s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 99s Setting up strace (6.13+ds-1ubuntu1) ... 99s Processing triggers for man-db (2.13.0-1) ... 103s Reading package lists... 104s Building dependency tree... 104s Reading state information... 105s Starting pkgProblemResolver with broken count: 0 105s Starting 2 pkgProblemResolver with broken count: 0 105s Done 106s Solving dependencies... 107s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 111s autopkgtest [01:29:23]: rebooting testbed after setup commands that affected boot 155s autopkgtest [01:30:07]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 180s autopkgtest [01:30:32]: @@@@@@@@@@@@@@@@@@@@ apt-source cnvkit 228s Get:1 http://ftpmaster.internal/ubuntu plucky/universe cnvkit 0.9.12-1 (dsc) [2483 B] 228s Get:2 http://ftpmaster.internal/ubuntu plucky/universe cnvkit 0.9.12-1 (tar) [32.1 MB] 228s Get:3 http://ftpmaster.internal/ubuntu plucky/universe cnvkit 0.9.12-1 (diff) [20.8 kB] 228s gpgv: Signature made Thu Feb 6 14:25:04 2025 UTC 228s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 228s gpgv: issuer "crusoe@debian.org" 228s gpgv: Can't check signature: No public key 228s dpkg-source: warning: cannot verify inline signature for ./cnvkit_0.9.12-1.dsc: no acceptable signature found 230s autopkgtest [01:31:22]: testing package cnvkit version 0.9.12-1 232s autopkgtest [01:31:24]: build not needed 239s autopkgtest [01:31:31]: test run-unit-test: preparing testbed 241s Reading package lists... 241s Building dependency tree... 241s Reading state information... 242s Starting pkgProblemResolver with broken count: 1 242s Starting 2 pkgProblemResolver with broken count: 1 242s Investigating (0) cnvkit:armhf < none -> 0.9.12-1 @un puN Ib > 242s Broken cnvkit:armhf Depends on python3-biopython:armhf < none | 1.85+dfsg-2build1 @un uH > 242s Considering python3-biopython:armhf 1 as a solution to cnvkit:armhf 0 242s Re-Instated python3-numpy-dev:armhf 242s Re-Instated libblas3:armhf 242s Re-Instated libgfortran5:armhf 242s Re-Instated liblapack3:armhf 242s Re-Instated python3-numpy:armhf 242s Re-Instated libgomp1:armhf 242s Re-Instated libimagequant0:armhf 242s Re-Instated libgraphite2-3:armhf 242s Re-Instated libharfbuzz0b:armhf 242s Re-Instated libraqm0:armhf 242s Re-Instated libwebpdemux2:armhf 242s Re-Instated libwebpmux3:armhf 242s Re-Instated python3-pil:armhf 242s Re-Instated python3-cairo:armhf 242s Re-Instated python3-freetype:armhf 242s Re-Instated python3-rlpycairo:armhf 242s Re-Instated libfontenc1:armhf 242s Re-Instated x11-common:armhf 242s Re-Instated xfonts-encodings:armhf 242s Re-Instated xfonts-utils:armhf 242s Re-Instated fonts-urw-base35:armhf 242s Re-Instated python3-reportlab:armhf 242s Re-Instated sgml-base:armhf 242s Re-Instated xml-core:armhf 242s Re-Instated w3c-sgml-lib:armhf 242s Re-Instated python3-biopython:armhf 242s Broken cnvkit:armhf Depends on python3-matplotlib:armhf < none | 3.8.3-7build1 @un uH > 242s Considering python3-matplotlib:armhf 1 as a solution to cnvkit:armhf 0 242s Re-Instated libjs-jquery:armhf 242s Re-Instated libjs-jquery-ui:armhf 242s Re-Instated fonts-lyx:armhf 242s Re-Instated python-matplotlib-data:armhf 242s Re-Instated libtcl8.6:armhf 242s Re-Instated libxft2:armhf 242s Re-Instated libxss1:armhf 242s Re-Instated libtk8.6:armhf 242s Re-Instated python3.12-tk:armhf 242s Re-Instated python3.13-tk:armhf 242s Re-Instated tk8.6-blt2.5:armhf 242s Re-Instated blt:armhf 242s Re-Instated python3-tk:armhf 242s Re-Instated python3-pil.imagetk:armhf 242s Re-Instated python3-contourpy:armhf 242s Re-Instated python3-cycler:armhf 242s Re-Instated python3-brotli:armhf 242s Re-Instated python3-platformdirs:armhf 242s Re-Instated python3-fs:armhf 242s Re-Instated libxslt1.1:armhf 242s Re-Instated python3-lxml:armhf 242s Re-Instated python3-lz4:armhf 242s Re-Instated python3-decorator:armhf 242s Re-Instated liblbfgsb0:armhf 242s Re-Instated python3-scipy:armhf 242s Re-Instated python3-mpmath:armhf 242s Re-Instated python3-sympy:armhf 242s Re-Instated python3-ufolib2:armhf 242s Re-Instated python3-unicodedata2:armhf 242s Re-Instated unicode-data:armhf 242s Re-Instated python3-fonttools:armhf 242s Re-Instated python3-kiwisolver:armhf 242s Re-Instated libqhull-r8.0:armhf 242s Re-Instated python3-matplotlib:armhf 242s Broken cnvkit:armhf Depends on python3-pandas:armhf < none | 2.2.3+dfsg-8build1 @un uH > 242s Considering python3-pandas:armhf 1 as a solution to cnvkit:armhf 0 242s Re-Instated python3-pytz:armhf 242s Re-Instated python3-tz:armhf 242s Re-Instated python3-pandas-lib:armhf 242s Re-Instated python3-pandas:armhf 242s Broken cnvkit:armhf Depends on python3-pomegranate:armhf < none | 0.15.0-1build1 @un uH > (>= 0.15) 242s Considering python3-pomegranate:armhf 0 as a solution to cnvkit:armhf 0 242s Re-Instated cython3:armhf 242s Re-Instated python3-joblib:armhf 242s Re-Instated python3-networkx:armhf 242s Re-Instated python3-pomegranate:armhf 242s Broken cnvkit:armhf Depends on python3-pyfaidx:armhf < none | 0.8.1.3-1 @un uH > 242s Considering python3-pyfaidx:armhf 1 as a solution to cnvkit:armhf 0 242s Re-Instated python3-importlib-metadata:armhf 242s Re-Instated python3-pyfaidx:armhf 242s Broken cnvkit:armhf Depends on python3-pysam:armhf < none | 0.23.0+ds-1build1 @un uH > 242s Considering python3-pysam:armhf 1 as a solution to cnvkit:armhf 0 242s Re-Instated libhtscodecs2:armhf 242s Re-Instated libhts3t64:armhf 242s Re-Instated python3-pysam:armhf 242s Broken cnvkit:armhf Depends on python3-sklearn:armhf < none | 1.4.2+dfsg-8 @un uH > 242s Considering python3-sklearn:armhf 1 as a solution to cnvkit:armhf 0 242s Re-Instated python3-threadpoolctl:armhf 242s Re-Instated python3-sklearn-lib:armhf 242s Re-Instated python3-sklearn:armhf 242s Broken cnvkit:armhf Depends on r-bioc-dnacopy:armhf < none @un H > 242s Done 242s Some packages could not be installed. This may mean that you have 242s requested an impossible situation or if you are using the unstable 242s distribution that some required packages have not yet been created 242s or been moved out of Incoming. 242s The following information may help to resolve the situation: 242s 242s The following packages have unmet dependencies: 243s cnvkit : Depends: r-bioc-dnacopy but it is not installable 243s E: Unable to correct problems, you have held broken packages. 243s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 246s Reading package lists... 247s Building dependency tree... 247s Reading state information... 248s Starting pkgProblemResolver with broken count: 1 248s Starting 2 pkgProblemResolver with broken count: 1 248s Investigating (0) cnvkit:armhf < none -> 0.9.12-1 @un puN Ib > 248s Broken cnvkit:armhf Depends on python3-biopython:armhf < none | 1.85+dfsg-2build1 @un uH > 248s Considering python3-biopython:armhf 1 as a solution to cnvkit:armhf 0 248s Re-Instated python3-numpy-dev:armhf 248s Re-Instated libblas3:armhf 248s Re-Instated gcc-15-base:armhf 248s Re-Instated libgfortran5:armhf 248s Re-Instated liblapack3:armhf 248s Re-Instated python3-numpy:armhf 248s Re-Instated libgomp1:armhf 248s Re-Instated libimagequant0:armhf 248s Re-Instated libgraphite2-3:armhf 248s Re-Instated libharfbuzz0b:armhf 248s Re-Instated libraqm0:armhf 248s Re-Instated libwebpdemux2:armhf 248s Re-Instated libwebpmux3:armhf 248s Re-Instated python3-pil:armhf 248s Re-Instated python3-cairo:armhf 248s Re-Instated python3-freetype:armhf 248s Re-Instated python3-rlpycairo:armhf 248s Re-Instated libfontenc1:armhf 248s Re-Instated x11-common:armhf 248s Re-Instated xfonts-encodings:armhf 248s Re-Instated xfonts-utils:armhf 248s Re-Instated fonts-urw-base35:armhf 248s Re-Instated python3-reportlab:armhf 248s Re-Instated sgml-base:armhf 248s Re-Instated xml-core:armhf 248s Re-Instated w3c-sgml-lib:armhf 248s Re-Instated python3-biopython:armhf 248s Broken cnvkit:armhf Depends on python3-matplotlib:armhf < none | 3.8.3-7build1 @un uH > 248s Considering python3-matplotlib:armhf 1 as a solution to cnvkit:armhf 0 248s Re-Instated libjs-jquery:armhf 248s Re-Instated libjs-jquery-ui:armhf 248s Re-Instated fonts-lyx:armhf 248s Re-Instated python-matplotlib-data:armhf 248s Re-Instated libtcl8.6:armhf 248s Re-Instated libxft2:armhf 248s Re-Instated libxss1:armhf 248s Re-Instated libtk8.6:armhf 248s Re-Instated python3.13-tk:armhf 248s Re-Instated tk8.6-blt2.5:armhf 248s Re-Instated blt:armhf 248s Re-Instated python3-tk:armhf 248s Re-Instated python3-pil.imagetk:armhf 248s Re-Instated python3-contourpy:armhf 248s Re-Instated python3-cycler:armhf 248s Re-Instated python3-brotli:armhf 248s Re-Instated python3-platformdirs:armhf 248s Re-Instated python3-fs:armhf 248s Re-Instated libxslt1.1:armhf 248s Re-Instated python3-lxml:armhf 248s Re-Instated python3-lz4:armhf 248s Re-Instated python3-decorator:armhf 248s Re-Instated liblbfgsb0:armhf 248s Re-Instated python3-scipy:armhf 248s Re-Instated python3-mpmath:armhf 248s Re-Instated python3-sympy:armhf 248s Re-Instated python3-ufolib2:armhf 248s Re-Instated python3-unicodedata2:armhf 248s Re-Instated unicode-data:armhf 248s Re-Instated python3-fonttools:armhf 248s Re-Instated python3-kiwisolver:armhf 248s Re-Instated libqhull-r8.0:armhf 248s Re-Instated python3-matplotlib:armhf 248s Broken cnvkit:armhf Depends on python3-pandas:armhf < none | 2.2.3+dfsg-8build1 @un uH > 248s Considering python3-pandas:armhf 1 as a solution to cnvkit:armhf 0 248s Re-Instated python3-pytz:armhf 248s Re-Instated python3-tz:armhf 248s Re-Instated python3-pandas-lib:armhf 248s Re-Instated python3-pandas:armhf 248s Broken cnvkit:armhf Depends on python3-pomegranate:armhf < none | 0.15.0-1build1 @un uH > (>= 0.15) 248s Considering python3-pomegranate:armhf 0 as a solution to cnvkit:armhf 0 248s Re-Instated cython3:armhf 248s Re-Instated python3-joblib:armhf 248s Re-Instated python3-networkx:armhf 248s Re-Instated python3-pomegranate:armhf 248s Broken cnvkit:armhf Depends on python3-pyfaidx:armhf < none | 0.8.1.3-1 @un uH > 248s Considering python3-pyfaidx:armhf 1 as a solution to cnvkit:armhf 0 248s Re-Instated python3-importlib-metadata:armhf 248s Re-Instated python3-pyfaidx:armhf 248s Broken cnvkit:armhf Depends on python3-pysam:armhf < none | 0.23.0+ds-1build1 @un uH > 248s Considering python3-pysam:armhf 1 as a solution to cnvkit:armhf 0 248s Re-Instated libhtscodecs2:armhf 248s Re-Instated libhts3t64:armhf 248s Re-Instated python3-pysam:armhf 248s Broken cnvkit:armhf Depends on python3-sklearn:armhf < none | 1.4.2+dfsg-8 @un uH > 248s Considering python3-sklearn:armhf 1 as a solution to cnvkit:armhf 0 248s Re-Instated python3-threadpoolctl:armhf 248s Re-Instated python3-sklearn-lib:armhf 248s Re-Instated python3-sklearn:armhf 248s Broken cnvkit:armhf Depends on r-bioc-dnacopy:armhf < none @un H > 248s Done 248s Some packages could not be installed. This may mean that you have 248s requested an impossible situation or if you are using the unstable 248s distribution that some required packages have not yet been created 248s or been moved out of Incoming. 248s The following information may help to resolve the situation: 248s 248s The following packages have unmet dependencies: 249s cnvkit : Depends: r-bioc-dnacopy but it is not installable 249s libatomic1 : Depends: gcc-15-base (= 15-20250222-0ubuntu1) but 15-20250315-1ubuntu1 is to be installed 249s libgcc-s1 : Depends: gcc-15-base (= 15-20250222-0ubuntu1) but 15-20250315-1ubuntu1 is to be installed 249s libstdc++6 : Depends: gcc-15-base (= 15-20250222-0ubuntu1) but 15-20250315-1ubuntu1 is to be installed 249s E: Error, pkgProblemResolver::Resolve generated breaks, this may be caused by held packages. 249s autopkgtest [01:31:41]: test pybuild-autopkgtest: preparing testbed 249s run-unit-test SKIP installation fails and skip-not-installable set 272s autopkgtest [01:32:04]: testbed dpkg architecture: armhf 274s autopkgtest [01:32:06]: testbed apt version: 2.9.33 278s autopkgtest [01:32:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup 279s autopkgtest [01:32:11]: testbed release detected to be: plucky 287s autopkgtest [01:32:19]: updating testbed package index (apt update) 289s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 290s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 290s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 290s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 290s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [41.4 kB] 290s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.7 kB] 290s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [365 kB] 291s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [74.9 kB] 291s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1792 B] 291s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 291s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [290 kB] 291s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [10.5 kB] 291s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [4168 B] 291s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [240 B] 291s Get:15 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 303s Get:16 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 303s Get:17 http://ftpmaster.internal/ubuntu plucky/main Sources [1389 kB] 304s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 304s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.5 kB] 304s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 304s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.3 MB] 311s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 313s Fetched 41.1 MB in 23s (1770 kB/s) 314s Reading package lists... 320s autopkgtest [01:32:52]: upgrading testbed (apt dist-upgrade and autopurge) 322s Reading package lists... 322s Building dependency tree... 322s Reading state information... 323s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 323s Starting 2 pkgProblemResolver with broken count: 0 323s Done 325s Entering ResolveByKeep 325s 326s Calculating upgrade... 327s The following packages will be upgraded: 327s pinentry-curses python3-jinja2 sos strace 327s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 327s Need to get 960 kB of archives. 327s After this operation, 23.6 kB of additional disk space will be used. 327s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 327s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf pinentry-curses armhf 1.3.1-2ubuntu3 [40.6 kB] 327s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 328s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 328s Fetched 960 kB in 1s (933 kB/s) 329s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 329s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 329s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 329s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_armhf.deb ... 329s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 329s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 329s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 329s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 329s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 329s Setting up sos (4.9.0-5) ... 330s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 330s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 330s Setting up strace (6.13+ds-1ubuntu1) ... 330s Processing triggers for man-db (2.13.0-1) ... 333s Reading package lists... 334s Building dependency tree... 334s Reading state information... 335s Starting pkgProblemResolver with broken count: 0 335s Starting 2 pkgProblemResolver with broken count: 0 335s Done 336s Solving dependencies... 337s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 339s autopkgtest [01:33:11]: rebooting testbed after setup commands that affected boot 410s Reading package lists... 410s Building dependency tree... 410s Reading state information... 411s Starting pkgProblemResolver with broken count: 1 411s Starting 2 pkgProblemResolver with broken count: 1 411s Investigating (0) satisfy:command-line:armhf < none -> 1 @un puN Ib > 411s Broken satisfy:command-line:armhf Depends on cnvkit:armhf < none | 0.9.12-1 @un uH > 411s Considering cnvkit:armhf 1 as a solution to satisfy:command-line:armhf 9998 411s Re-Instated python3-numpy-dev:armhf 411s Re-Instated libblas3:armhf 411s Re-Instated libgfortran5:armhf 411s Re-Instated liblapack3:armhf 411s Re-Instated python3-numpy:armhf 411s Re-Instated libfreetype6:armhf 411s Re-Instated libgomp1:armhf 411s Re-Instated libimagequant0:armhf 411s Re-Instated libjpeg-turbo8:armhf 411s Re-Instated libjpeg8:armhf 411s Re-Instated liblcms2-2:armhf 411s Re-Instated libopenjp2-7:armhf 411s Re-Instated libgraphite2-3:armhf 411s Re-Instated libharfbuzz0b:armhf 411s Re-Instated libraqm0:armhf 411s Re-Instated libdeflate0:armhf 411s Re-Instated libjbig0:armhf 411s Re-Instated liblerc4:armhf 411s Re-Instated libsharpyuv0:armhf 411s Re-Instated libwebp7:armhf 411s Re-Instated libtiff6:armhf 411s Re-Instated libwebpdemux2:armhf 411s Re-Instated libwebpmux3:armhf 411s Re-Instated python3-pil:armhf 411s Re-Instated fonts-dejavu-mono:armhf 411s Re-Instated fonts-dejavu-core:armhf 411s Re-Instated fontconfig-config:armhf 411s Re-Instated libfontconfig1:armhf 411s Re-Instated libpixman-1-0:armhf 411s Re-Instated libxcb-render0:armhf 411s Re-Instated libxcb-shm0:armhf 411s Re-Instated libxrender1:armhf 411s Re-Instated libcairo2:armhf 411s Re-Instated python3-cairo:armhf 411s Re-Instated python3-freetype:armhf 411s Re-Instated python3-rlpycairo:armhf 411s Re-Instated libfontenc1:armhf 411s Re-Instated x11-common:armhf 411s Re-Instated xfonts-encodings:armhf 411s Re-Instated xfonts-utils:armhf 411s Re-Instated fonts-urw-base35:armhf 411s Re-Instated python3-reportlab:armhf 411s Re-Instated sgml-base:armhf 411s Re-Instated xml-core:armhf 411s Re-Instated w3c-sgml-lib:armhf 411s Re-Instated python3-biopython:armhf 411s Re-Instated libjs-jquery:armhf 411s Re-Instated libjs-jquery-ui:armhf 411s Re-Instated fonts-lyx:armhf 411s Re-Instated python-matplotlib-data:armhf 411s Re-Instated libtcl8.6:armhf 411s Re-Instated libxft2:armhf 411s Re-Instated libxss1:armhf 411s Re-Instated libtk8.6:armhf 411s Re-Instated python3.12-tk:armhf 411s Re-Instated python3.13-tk:armhf 411s Re-Instated tk8.6-blt2.5:armhf 411s Re-Instated blt:armhf 411s Re-Instated python3-tk:armhf 411s Re-Instated python3-pil.imagetk:armhf 411s Re-Instated python3-contourpy:armhf 411s Re-Instated python3-cycler:armhf 411s Re-Instated python3-brotli:armhf 411s Re-Instated python3-platformdirs:armhf 411s Re-Instated python3-fs:armhf 411s Re-Instated libxslt1.1:armhf 411s Re-Instated python3-lxml:armhf 411s Re-Instated python3-lz4:armhf 411s Re-Instated python3-decorator:armhf 411s Re-Instated liblbfgsb0:armhf 411s Re-Instated python3-scipy:armhf 411s Re-Instated python3-mpmath:armhf 411s Re-Instated python3-sympy:armhf 411s Re-Instated python3-ufolib2:armhf 411s Re-Instated python3-unicodedata2:armhf 411s Re-Instated unicode-data:armhf 411s Re-Instated python3-fonttools:armhf 411s Re-Instated python3-kiwisolver:armhf 411s Re-Instated libqhull-r8.0:armhf 411s Re-Instated python3-matplotlib:armhf 411s Re-Instated python3-pytz:armhf 411s Re-Instated python3-tz:armhf 411s Re-Instated python3-pandas-lib:armhf 411s Re-Instated python3-pandas:armhf 411s Re-Instated cython3:armhf 411s Re-Instated python3-joblib:armhf 411s Re-Instated python3-networkx:armhf 411s Re-Instated python3-pomegranate:armhf 411s Re-Instated python3-importlib-metadata:armhf 411s Re-Instated python3-pyfaidx:armhf 411s Re-Instated libhtscodecs2:armhf 411s Re-Instated libhts3t64:armhf 411s Re-Instated python3-pysam:armhf 411s Re-Instated python3-threadpoolctl:armhf 411s Re-Instated python3-sklearn-lib:armhf 411s Re-Instated python3-sklearn:armhf 411s Reinst Failed early because of r-bioc-dnacopy:armhf 411s Broken satisfy:command-line:armhf Depends on pybuild-plugin-autopkgtest:armhf < none | 6.20250308 @un uH > 411s Considering pybuild-plugin-autopkgtest:armhf 1 as a solution to satisfy:command-line:armhf 9998 411s Re-Instated m4:armhf 411s Re-Instated autoconf:armhf 411s Re-Instated autotools-dev:armhf 411s Re-Instated automake:armhf 411s Re-Instated autopoint:armhf 411s Re-Instated libdebhelper-perl:armhf 411s Re-Instated libisl23:armhf 411s Re-Instated libmpc3:armhf 411s Re-Instated cpp-14-arm-linux-gnueabihf:armhf 411s Re-Instated cpp-14:armhf 411s Re-Instated cpp-arm-linux-gnueabihf:armhf 411s Re-Instated cpp:armhf 411s Re-Instated libcc1-0:armhf 411s Re-Instated libasan8:armhf 411s Re-Instated libubsan1:armhf 411s Re-Instated libgcc-14-dev:armhf 411s Re-Instated gcc-14-arm-linux-gnueabihf:armhf 411s Re-Instated gcc-14:armhf 411s Re-Instated gcc-arm-linux-gnueabihf:armhf 411s Re-Instated gcc:armhf 411s Re-Instated libc-dev-bin:armhf 411s Re-Instated linux-libc-dev:armhf 411s Re-Instated libcrypt-dev:armhf 411s Re-Instated rpcsvc-proto:armhf 411s Re-Instated libc6-dev:armhf 411s Re-Instated libtool:armhf 411s Re-Instated dh-autoreconf:armhf 411s Re-Instated libarchive-zip-perl:armhf 411s Re-Instated libfile-stripnondeterminism-perl:armhf 411s Re-Instated dh-strip-nondeterminism:armhf 411s Re-Instated libdw1t64:armhf 411s Re-Instated debugedit:armhf 411s Re-Instated dwz:armhf 411s Re-Instated gettext:armhf 411s Re-Instated intltool-debian:armhf 411s Re-Instated po-debconf:armhf 411s Re-Instated debhelper:armhf 411s Re-Instated dh-python:armhf 411s Re-Instated pybuild-plugin-autopkgtest:armhf 411s Broken satisfy:command-line:armhf Depends on python3-all:armhf < none | 3.13.2-2 @un uH > 411s Considering python3-all:armhf 1 as a solution to satisfy:command-line:armhf 9998 411s Re-Instated python3-all:armhf 411s Broken satisfy:command-line:armhf Depends on pybuild-plugin-pyproject:armhf < none | 6.20250308 @un uH > 411s Considering pybuild-plugin-pyproject:armhf 1 as a solution to satisfy:command-line:armhf 9998 411s Re-Instated python3-pyproject-hooks:armhf 411s Re-Instated python3-toml:armhf 411s Re-Instated python3-wheel:armhf 411s Re-Instated python3-build:armhf 411s Re-Instated python3-installer:armhf 411s Re-Instated pybuild-plugin-pyproject:armhf 411s Broken satisfy:command-line:armhf Depends on python3-pytest:armhf < none | 8.3.5-1 @un uH > 411s Considering python3-pytest:armhf 1 as a solution to satisfy:command-line:armhf 9998 411s Re-Instated python3-iniconfig:armhf 411s Re-Instated python3-pluggy:armhf 411s Re-Instated python3-pytest:armhf 411s Broken satisfy:command-line:armhf Depends on r-bioc-dnacopy:armhf < none @un H > 411s Broken satisfy:command-line:armhf Depends on poppler-utils:armhf < none | 25.03.0-2 @un uH > 411s Considering poppler-utils:armhf 1 as a solution to satisfy:command-line:armhf 9998 411s Re-Instated libgpgmepp6t64:armhf 411s Re-Instated libpoppler147:armhf 411s Re-Instated poppler-utils:armhf 411s Broken satisfy:command-line:armhf Depends on build-essential:armhf < none | 12.10ubuntu1 @un uH > 411s Considering build-essential:armhf 2 as a solution to satisfy:command-line:armhf 9998 411s Re-Instated libstdc++-14-dev:armhf 411s Re-Instated g++-14-arm-linux-gnueabihf:armhf 411s Re-Instated g++-14:armhf 411s Re-Instated g++-arm-linux-gnueabihf:armhf 411s Re-Instated g++:armhf 411s Re-Instated build-essential:armhf 411s Done 411s Some packages could not be installed. This may mean that you have 411s requested an impossible situation or if you are using the unstable 411s distribution that some required packages have not yet been created 411s or been moved out of Incoming. 411s The following information may help to resolve the situation: 411s 411s The following packages have unmet dependencies: 412s satisfy:command-line : Depends: cnvkit but it is not going to be installed 412s Depends: r-bioc-dnacopy but it is not installable 412s E: Unable to correct problems, you have held broken packages. 412s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 416s Reading package lists... 416s Building dependency tree... 416s Reading state information... 417s Starting pkgProblemResolver with broken count: 1 417s Starting 2 pkgProblemResolver with broken count: 1 417s Investigating (0) satisfy:command-line:armhf < none -> 1 @un puN Ib > 417s Broken satisfy:command-line:armhf Depends on cnvkit:armhf < none | 0.9.12-1 @un uH > 417s Considering cnvkit:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Re-Instated python3-numpy-dev:armhf 417s Re-Instated libblas3:armhf 417s Re-Instated gcc-15-base:armhf 417s Re-Instated libgfortran5:armhf 417s Re-Instated liblapack3:armhf 417s Re-Instated python3-numpy:armhf 417s Re-Instated libfreetype6:armhf 417s Re-Instated libgomp1:armhf 417s Re-Instated libimagequant0:armhf 417s Re-Instated libjpeg-turbo8:armhf 417s Re-Instated libjpeg8:armhf 417s Re-Instated liblcms2-2:armhf 417s Re-Instated libopenjp2-7:armhf 417s Re-Instated libgraphite2-3:armhf 417s Re-Instated libharfbuzz0b:armhf 417s Re-Instated libraqm0:armhf 417s Re-Instated libdeflate0:armhf 417s Re-Instated libjbig0:armhf 417s Re-Instated liblerc4:armhf 417s Re-Instated libsharpyuv0:armhf 417s Re-Instated libwebp7:armhf 417s Re-Instated libtiff6:armhf 417s Re-Instated libwebpdemux2:armhf 417s Re-Instated libwebpmux3:armhf 417s Re-Instated python3-pil:armhf 417s Re-Instated fonts-dejavu-mono:armhf 417s Re-Instated fonts-dejavu-core:armhf 417s Re-Instated fontconfig-config:armhf 417s Re-Instated libfontconfig1:armhf 417s Re-Instated libpixman-1-0:armhf 417s Re-Instated libxcb-render0:armhf 417s Re-Instated libxcb-shm0:armhf 417s Re-Instated libxrender1:armhf 417s Re-Instated libcairo2:armhf 417s Re-Instated python3-cairo:armhf 417s Re-Instated python3-freetype:armhf 417s Re-Instated python3-rlpycairo:armhf 417s Re-Instated libfontenc1:armhf 417s Re-Instated x11-common:armhf 417s Re-Instated xfonts-encodings:armhf 417s Re-Instated xfonts-utils:armhf 417s Re-Instated fonts-urw-base35:armhf 417s Re-Instated python3-reportlab:armhf 417s Re-Instated sgml-base:armhf 417s Re-Instated xml-core:armhf 417s Re-Instated w3c-sgml-lib:armhf 417s Re-Instated python3-biopython:armhf 417s Re-Instated libjs-jquery:armhf 417s Re-Instated libjs-jquery-ui:armhf 417s Re-Instated fonts-lyx:armhf 417s Re-Instated python-matplotlib-data:armhf 417s Re-Instated libtcl8.6:armhf 417s Re-Instated libxft2:armhf 417s Re-Instated libxss1:armhf 417s Re-Instated libtk8.6:armhf 417s Re-Instated python3.13-tk:armhf 417s Re-Instated tk8.6-blt2.5:armhf 417s Re-Instated blt:armhf 417s Re-Instated python3-tk:armhf 417s Re-Instated python3-pil.imagetk:armhf 417s Re-Instated python3-contourpy:armhf 417s Re-Instated python3-cycler:armhf 417s Re-Instated python3-brotli:armhf 417s Re-Instated python3-platformdirs:armhf 417s Re-Instated python3-fs:armhf 417s Re-Instated libxslt1.1:armhf 417s Re-Instated python3-lxml:armhf 417s Re-Instated python3-lz4:armhf 417s Re-Instated python3-decorator:armhf 417s Re-Instated liblbfgsb0:armhf 417s Re-Instated python3-scipy:armhf 417s Re-Instated python3-mpmath:armhf 417s Re-Instated python3-sympy:armhf 417s Re-Instated python3-ufolib2:armhf 417s Re-Instated python3-unicodedata2:armhf 417s Re-Instated unicode-data:armhf 417s Re-Instated python3-fonttools:armhf 417s Re-Instated python3-kiwisolver:armhf 417s Re-Instated libqhull-r8.0:armhf 417s Re-Instated python3-matplotlib:armhf 417s Re-Instated python3-pytz:armhf 417s Re-Instated python3-tz:armhf 417s Re-Instated python3-pandas-lib:armhf 417s Re-Instated python3-pandas:armhf 417s Re-Instated cython3:armhf 417s Re-Instated python3-joblib:armhf 417s Re-Instated python3-networkx:armhf 417s Re-Instated python3-pomegranate:armhf 417s Re-Instated python3-importlib-metadata:armhf 417s Re-Instated python3-pyfaidx:armhf 417s Re-Instated libhtscodecs2:armhf 417s Re-Instated libhts3t64:armhf 417s Re-Instated python3-pysam:armhf 417s Re-Instated python3-threadpoolctl:armhf 417s Re-Instated python3-sklearn-lib:armhf 417s Re-Instated python3-sklearn:armhf 417s Reinst Failed early because of r-bioc-dnacopy:armhf 417s Broken satisfy:command-line:armhf Depends on pybuild-plugin-autopkgtest:armhf < none | 6.20250308 @un uH > 417s Considering pybuild-plugin-autopkgtest:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Re-Instated m4:armhf 417s Re-Instated autoconf:armhf 417s Re-Instated autotools-dev:armhf 417s Re-Instated automake:armhf 417s Re-Instated autopoint:armhf 417s Re-Instated libdebhelper-perl:armhf 417s Re-Instated gcc-14-base:armhf 417s Re-Instated libisl23:armhf 417s Re-Instated libmpc3:armhf 417s Re-Instated cpp-14-arm-linux-gnueabihf:armhf 417s Re-Instated cpp-14:armhf 417s Re-Instated cpp-arm-linux-gnueabihf:armhf 417s Re-Instated cpp:armhf 417s Re-Instated libcc1-0:armhf 417s Re-Instated libasan8:armhf 417s Re-Instated libubsan1:armhf 417s Re-Instated libgcc-14-dev:armhf 417s Re-Instated gcc-14-arm-linux-gnueabihf:armhf 417s Re-Instated gcc-14:armhf 417s Re-Instated gcc-arm-linux-gnueabihf:armhf 417s Re-Instated gcc:armhf 417s Re-Instated libc6:armhf 417s Re-Instated libc-dev-bin:armhf 417s Re-Instated linux-libc-dev:armhf 417s Re-Instated libcrypt-dev:armhf 417s Re-Instated rpcsvc-proto:armhf 417s Re-Instated libc6-dev:armhf 417s Re-Instated libtool:armhf 417s Re-Instated dh-autoreconf:armhf 417s Re-Instated libarchive-zip-perl:armhf 417s Re-Instated libfile-stripnondeterminism-perl:armhf 417s Re-Instated dh-strip-nondeterminism:armhf 417s Re-Instated libdw1t64:armhf 417s Re-Instated debugedit:armhf 417s Re-Instated dwz:armhf 417s Re-Instated gettext:armhf 417s Re-Instated intltool-debian:armhf 417s Re-Instated po-debconf:armhf 417s Re-Instated debhelper:armhf 417s Re-Instated dh-python:armhf 417s Re-Instated pybuild-plugin-autopkgtest:armhf 417s Broken satisfy:command-line:armhf Depends on python3-all:armhf < none | 3.13.2-2 @un uH > 417s Considering python3-all:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Re-Instated python3-all:armhf 417s Broken satisfy:command-line:armhf Depends on pybuild-plugin-pyproject:armhf < none | 6.20250308 @un uH > 417s Considering pybuild-plugin-pyproject:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Re-Instated python3-pyproject-hooks:armhf 417s Re-Instated python3-toml:armhf 417s Re-Instated python3-wheel:armhf 417s Re-Instated python3-build:armhf 417s Re-Instated python3-installer:armhf 417s Re-Instated pybuild-plugin-pyproject:armhf 417s Broken satisfy:command-line:armhf Depends on python3-pytest:armhf < none | 8.3.5-1 @un uH > 417s Considering python3-pytest:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Re-Instated python3-iniconfig:armhf 417s Re-Instated python3-pluggy:armhf 417s Re-Instated python3-pytest:armhf 417s Broken satisfy:command-line:armhf Depends on r-bioc-dnacopy:armhf < none @un H > 417s Broken satisfy:command-line:armhf Depends on poppler-utils:armhf < none | 25.03.0-2 @un uH > 417s Considering poppler-utils:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Re-Instated libgpgmepp6t64:armhf 417s Re-Instated libpoppler147:armhf 417s Re-Instated poppler-utils:armhf 417s Broken satisfy:command-line:armhf Depends on build-essential:armhf < none | 12.12 @un uH > 417s Considering build-essential:armhf 2 as a solution to satisfy:command-line:armhf 9998 417s Re-Instated libstdc++-14-dev:armhf 417s Re-Instated g++-14-arm-linux-gnueabihf:armhf 417s Re-Instated g++-14:armhf 417s Re-Instated g++-arm-linux-gnueabihf:armhf 417s Re-Instated g++:armhf 417s Re-Instated build-essential:armhf 417s Investigating (0) libgcc-s1:armhf < 15-20250222-0ubuntu1 | 15-20250315-1ubuntu1 @ii uH Ib > 417s Broken libgcc-s1:armhf Depends on gcc-15-base:armhf < 15-20250222-0ubuntu1 -> 15-20250315-1ubuntu1 @ii uU > (= 15-20250222-0ubuntu1) 417s Considering gcc-15-base:armhf 150 as a solution to libgcc-s1:armhf 5698 417s Added gcc-15-base:armhf to the remove list 417s Fixing libgcc-s1:armhf via keep of gcc-15-base:armhf 417s Investigating (0) libasan8:armhf < none -> 15-20250315-1ubuntu1 @un uN Ib > 417s Broken libasan8:armhf Depends on gcc-15-base:armhf < 15-20250222-0ubuntu1 | 15-20250315-1ubuntu1 @ii uH > (= 15-20250315-1ubuntu1) 417s Considering gcc-15-base:armhf 150 as a solution to libasan8:armhf 0 417s Holding Back libasan8:armhf rather than change gcc-15-base:armhf 417s Investigating (0) libubsan1:armhf < none -> 15-20250315-1ubuntu1 @un uN Ib > 417s Broken libubsan1:armhf Depends on gcc-15-base:armhf < 15-20250222-0ubuntu1 | 15-20250315-1ubuntu1 @ii uH > (= 15-20250315-1ubuntu1) 417s Considering gcc-15-base:armhf 150 as a solution to libubsan1:armhf 0 417s Holding Back libubsan1:armhf rather than change gcc-15-base:armhf 417s Investigating (0) libgcc-14-dev:armhf < none -> 14.2.0-19ubuntu1 @un uN Ib > 417s Broken libgcc-14-dev:armhf Depends on libasan8:armhf < none | 15-20250315-1ubuntu1 @un uH > (>= 14.2.0-19ubuntu1) 417s Considering libasan8:armhf 0 as a solution to libgcc-14-dev:armhf 0 417s Holding Back libgcc-14-dev:armhf rather than change libasan8:armhf 417s Investigating (0) libstdc++-14-dev:armhf < none -> 14.2.0-19ubuntu1 @un uN Ib > 417s Broken libstdc++-14-dev:armhf Depends on libgcc-14-dev:armhf < none | 14.2.0-19ubuntu1 @un uH > (= 14.2.0-19ubuntu1) 417s Considering libgcc-14-dev:armhf 0 as a solution to libstdc++-14-dev:armhf 0 417s Holding Back libstdc++-14-dev:armhf rather than change libgcc-14-dev:armhf 417s Investigating (0) libgomp1:armhf < none -> 15-20250315-1ubuntu1 @un uN Ib > 417s Broken libgomp1:armhf Depends on gcc-15-base:armhf < 15-20250222-0ubuntu1 | 15-20250315-1ubuntu1 @ii uH > (= 15-20250315-1ubuntu1) 417s Considering gcc-15-base:armhf 150 as a solution to libgomp1:armhf 0 417s Holding Back libgomp1:armhf rather than change gcc-15-base:armhf 417s Investigating (0) python3-sklearn-lib:armhf < none -> 1.4.2+dfsg-8 @un uN Ib > 417s Broken python3-sklearn-lib:armhf Depends on libgomp1:armhf < none | 15-20250315-1ubuntu1 @un uH > (>= 4.9) 417s Considering libgomp1:armhf 0 as a solution to python3-sklearn-lib:armhf 0 417s Holding Back python3-sklearn-lib:armhf rather than change libgomp1:armhf 417s Investigating (0) libgfortran5:armhf < none -> 15-20250315-1ubuntu1 @un uN Ib > 417s Broken libgfortran5:armhf Depends on gcc-15-base:armhf < 15-20250222-0ubuntu1 | 15-20250315-1ubuntu1 @ii uH > (= 15-20250315-1ubuntu1) 417s Considering gcc-15-base:armhf 150 as a solution to libgfortran5:armhf 0 417s Holding Back libgfortran5:armhf rather than change gcc-15-base:armhf 417s Investigating (0) libcc1-0:armhf < none -> 15-20250315-1ubuntu1 @un uN Ib > 417s Broken libcc1-0:armhf Depends on gcc-15-base:armhf < 15-20250222-0ubuntu1 | 15-20250315-1ubuntu1 @ii uH > (= 15-20250315-1ubuntu1) 417s Considering gcc-15-base:armhf 150 as a solution to libcc1-0:armhf 0 417s Holding Back libcc1-0:armhf rather than change gcc-15-base:armhf 417s Investigating (0) python3-sklearn:armhf < none -> 1.4.2+dfsg-8 @un uN Ib > 417s Broken python3-sklearn:armhf Depends on python3-sklearn-lib:armhf < none | 1.4.2+dfsg-8 @un uH > (>= 1.4.2+dfsg-8) 417s Considering python3-sklearn-lib:armhf 0 as a solution to python3-sklearn:armhf 0 417s Holding Back python3-sklearn:armhf rather than change python3-sklearn-lib:armhf 417s Investigating (0) gcc-14-arm-linux-gnueabihf:armhf < none -> 14.2.0-19ubuntu1 @un uN Ib > 417s Broken gcc-14-arm-linux-gnueabihf:armhf Depends on libcc1-0:armhf < none | 15-20250315-1ubuntu1 @un uH > (>= 14.2.0-19ubuntu1) 417s Considering libcc1-0:armhf 0 as a solution to gcc-14-arm-linux-gnueabihf:armhf 0 417s Holding Back gcc-14-arm-linux-gnueabihf:armhf rather than change libcc1-0:armhf 417s Investigating (1) satisfy:command-line:armhf < none -> 1 @un puN Ib > 417s Broken satisfy:command-line:armhf Depends on cnvkit:armhf < none | 0.9.12-1 @un uH > 417s Considering cnvkit:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on r-bioc-dnacopy:armhf < none @un H > 417s Investigating (1) python3-scipy:armhf < none -> 1.14.1-4ubuntu2 @un uN Ib > 417s Broken python3-scipy:armhf Depends on libgfortran5:armhf < none | 15-20250315-1ubuntu1 @un uH > (>= 8) 417s Considering libgfortran5:armhf 0 as a solution to python3-scipy:armhf 1 417s Holding Back python3-scipy:armhf rather than change libgfortran5:armhf 417s Investigating (1) gettext:armhf < none -> 0.23.1-1 @un uN Ib > 417s Broken gettext:armhf Depends on libgomp1:armhf < none | 15-20250315-1ubuntu1 @un uH > (>= 6) 417s Considering libgomp1:armhf 0 as a solution to gettext:armhf 0 417s Holding Back gettext:armhf rather than change libgomp1:armhf 417s Investigating (1) python3-pomegranate:armhf < none -> 0.15.0-1build1 @un uN Ib > 417s Broken python3-pomegranate:armhf Depends on python3-scipy:armhf < none | 1.14.1-4ubuntu2 @un uH > 417s Considering python3-scipy:armhf 1 as a solution to python3-pomegranate:armhf 0 417s Holding Back python3-pomegranate:armhf rather than change python3-scipy:armhf 417s Investigating (1) libimagequant0:armhf < none -> 2.18.0-1build1 @un uN Ib > 417s Broken libimagequant0:armhf Depends on libgomp1:armhf < none | 15-20250315-1ubuntu1 @un uH > (>= 4.9) 417s Considering libgomp1:armhf 0 as a solution to libimagequant0:armhf 0 417s Holding Back libimagequant0:armhf rather than change libgomp1:armhf 417s Investigating (1) g++-14-arm-linux-gnueabihf:armhf < none -> 14.2.0-19ubuntu1 @un uN Ib > 417s Broken g++-14-arm-linux-gnueabihf:armhf Depends on gcc-14-arm-linux-gnueabihf:armhf < none | 14.2.0-19ubuntu1 @un uH > (= 14.2.0-19ubuntu1) 417s Considering gcc-14-arm-linux-gnueabihf:armhf 0 as a solution to g++-14-arm-linux-gnueabihf:armhf 0 417s Holding Back g++-14-arm-linux-gnueabihf:armhf rather than change gcc-14-arm-linux-gnueabihf:armhf 417s Investigating (1) liblapack3:armhf < none -> 3.12.1-2 @un uN Ib > 417s Broken liblapack3:armhf Depends on libgfortran5:armhf < none | 15-20250315-1ubuntu1 @un uH > (>= 8) 417s Considering libgfortran5:armhf 0 as a solution to liblapack3:armhf 0 417s Holding Back liblapack3:armhf rather than change libgfortran5:armhf 417s Investigating (1) g++-arm-linux-gnueabihf:armhf < none -> 4:14.2.0-1ubuntu1 @un uN Ib > 417s Broken g++-arm-linux-gnueabihf:armhf Depends on g++-14-arm-linux-gnueabihf:armhf < none | 14.2.0-19ubuntu1 @un uH > (>= 14.2.0-6~) 417s Considering g++-14-arm-linux-gnueabihf:armhf 0 as a solution to g++-arm-linux-gnueabihf:armhf 0 417s Holding Back g++-arm-linux-gnueabihf:armhf rather than change g++-14-arm-linux-gnueabihf:armhf 417s Investigating (1) liblbfgsb0:armhf < none -> 3.0+dfsg.4-1build1 @un uN Ib > 417s Broken liblbfgsb0:armhf Depends on libgfortran5:armhf < none | 15-20250315-1ubuntu1 @un uH > (>= 8) 417s Considering libgfortran5:armhf 0 as a solution to liblbfgsb0:armhf 0 417s Holding Back liblbfgsb0:armhf rather than change libgfortran5:armhf 417s Investigating (1) intltool-debian:armhf < none -> 0.35.0+20060710.6 @un uN Ib > 417s Broken intltool-debian:armhf Depends on gettext:armhf < none | 0.23.1-1 @un uH > 417s Considering gettext:armhf 0 as a solution to intltool-debian:armhf 0 417s Holding Back intltool-debian:armhf rather than change gettext:armhf 417s Investigating (1) gcc-arm-linux-gnueabihf:armhf < none -> 4:14.2.0-1ubuntu1 @un uN Ib > 417s Broken gcc-arm-linux-gnueabihf:armhf Depends on gcc-14-arm-linux-gnueabihf:armhf < none | 14.2.0-19ubuntu1 @un uH > (>= 14.2.0-6~) 417s Considering gcc-14-arm-linux-gnueabihf:armhf 0 as a solution to gcc-arm-linux-gnueabihf:armhf 0 417s Holding Back gcc-arm-linux-gnueabihf:armhf rather than change gcc-14-arm-linux-gnueabihf:armhf 417s Investigating (1) g++:armhf < none -> 4:14.2.0-1ubuntu1 @un uN Ib > 417s Broken g++:armhf Depends on g++-arm-linux-gnueabihf:armhf < none | 4:14.2.0-1ubuntu1 @un uH > (= 4:14.2.0-1ubuntu1) 417s Considering g++-arm-linux-gnueabihf:armhf 0 as a solution to g++:armhf 0 417s Holding Back g++:armhf rather than change g++-arm-linux-gnueabihf:armhf 417s Investigating (1) g++-14:armhf < none -> 14.2.0-19ubuntu1 @un uN Ib > 417s Broken g++-14:armhf Depends on g++-14-arm-linux-gnueabihf:armhf < none | 14.2.0-19ubuntu1 @un uH > (= 14.2.0-19ubuntu1) 417s Considering g++-14-arm-linux-gnueabihf:armhf 0 as a solution to g++-14:armhf 0 417s Holding Back g++-14:armhf rather than change g++-14-arm-linux-gnueabihf:armhf 417s Investigating (1) gcc-14:armhf < none -> 14.2.0-19ubuntu1 @un uN Ib > 417s Broken gcc-14:armhf Depends on gcc-14-arm-linux-gnueabihf:armhf < none | 14.2.0-19ubuntu1 @un uH > (= 14.2.0-19ubuntu1) 417s Considering gcc-14-arm-linux-gnueabihf:armhf 0 as a solution to gcc-14:armhf 0 417s Holding Back gcc-14:armhf rather than change gcc-14-arm-linux-gnueabihf:armhf 417s Investigating (1) python3-fonttools:armhf < none -> 4.55.3-2build1 @un uN Ib > 417s Broken python3-fonttools:armhf Depends on python3-scipy:armhf < none | 1.14.1-4ubuntu2 @un uH > (>= 1.10.0) 417s Considering python3-scipy:armhf 1 as a solution to python3-fonttools:armhf 0 417s Holding Back python3-fonttools:armhf rather than change python3-scipy:armhf 417s Broken python3-fonttools:armhf Depends on python3-munkres:armhf < none | 1.1.4-3 @un uH > (>= 1.1.4) 417s Considering python3-munkres:armhf 0 as a solution to python3-fonttools:armhf 0 417s Holding Back python3-fonttools:armhf rather than change python3-munkres:armhf 417s Or group keep for python3-fonttools:armhf 417s Investigating (1) po-debconf:armhf < none -> 1.0.21+nmu1 @un uN Ib > 417s Broken po-debconf:armhf Depends on gettext:armhf < none | 0.23.1-1 @un uH > (>= 0.16) 417s Considering gettext:armhf 0 as a solution to po-debconf:armhf 0 417s Holding Back po-debconf:armhf rather than change gettext:armhf 417s Investigating (2) satisfy:command-line:armhf < none -> 1 @un puN Ib > 417s Broken satisfy:command-line:armhf Depends on cnvkit:armhf < none | 0.9.12-1 @un uH > 417s Considering cnvkit:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-scipy:armhf < none | 1.14.1-4ubuntu2 @un uH > 417s Considering python3-scipy:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-pomegranate:armhf < none | 0.15.0-1build1 @un uH > (>= 0.15) 417s Considering python3-pomegranate:armhf 0 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on r-bioc-dnacopy:armhf < none @un H > 417s Investigating (2) build-essential:armhf < none -> 12.12 @un uN Ib > 417s Broken build-essential:armhf Depends on g++:armhf < none | 4:14.2.0-1ubuntu1 @un uH > (>= 4:14.2) 417s Considering g++:armhf 0 as a solution to build-essential:armhf 2 417s Holding Back build-essential:armhf rather than change g++:armhf 417s Investigating (2) gcc:armhf < none -> 4:14.2.0-1ubuntu1 @un uN Ib > 417s Broken gcc:armhf Depends on gcc-14:armhf < none | 14.2.0-19ubuntu1 @un uH > (>= 14.2.0-6~) 417s Considering gcc-14:armhf 0 as a solution to gcc:armhf 1 417s Holding Back gcc:armhf rather than change gcc-14:armhf 417s Investigating (2) python3-matplotlib:armhf < none -> 3.8.3-7build1 @un uN Ib > 417s Broken python3-matplotlib:armhf Depends on python3-fonttools:armhf < none | 4.55.3-2build1 @un uH > 417s Considering python3-fonttools:armhf 0 as a solution to python3-matplotlib:armhf 1 417s Holding Back python3-matplotlib:armhf rather than change python3-fonttools:armhf 417s Investigating (2) python3-numpy:armhf < none -> 1:2.2.3+ds-5 @un uN Ib > 417s Broken python3-numpy:armhf Depends on liblapack3:armhf < none | 3.12.1-2 @un uH > 417s Considering liblapack3:armhf 0 as a solution to python3-numpy:armhf 1 417s Holding Back python3-numpy:armhf rather than change liblapack3:armhf 417s Broken python3-numpy:armhf Depends on liblapack.so.3:armhf < none @un H > 417s Considering libopenblas0-serial:armhf 0 as a solution to python3-numpy:armhf 1 417s Holding Back python3-numpy:armhf rather than change liblapack.so.3:armhf 417s Or group keep for python3-numpy:armhf 417s Investigating (2) libtool:armhf < none -> 2.5.4-4 @un uN Ib > 417s Broken libtool:armhf Depends on gcc:armhf < none | 4:14.2.0-1ubuntu1 @un uH > 417s Considering gcc:armhf 1 as a solution to libtool:armhf 0 417s Holding Back libtool:armhf rather than change gcc:armhf 417s Broken libtool:armhf Depends on c-compiler:armhf < none @un H > 417s Considering tcc:armhf 0 as a solution to libtool:armhf 0 417s Holding Back libtool:armhf rather than change c-compiler:armhf 417s Or group keep for libtool:armhf 417s Investigating (2) dh-autoreconf:armhf < none -> 20 @un uN Ib > 417s Broken dh-autoreconf:armhf Depends on libtool:armhf < none | 2.5.4-4 @un uH > (>= 2.4.2) 417s Considering libtool:armhf 0 as a solution to dh-autoreconf:armhf 0 417s Holding Back dh-autoreconf:armhf rather than change libtool:armhf 417s Investigating (2) python3-pil:armhf < none -> 11.1.0-5build1 @un uN Ib > 417s Broken python3-pil:armhf Depends on libimagequant0:armhf < none | 2.18.0-1build1 @un uH > (>= 2.11.10) 417s Considering libimagequant0:armhf 0 as a solution to python3-pil:armhf 0 417s Holding Back python3-pil:armhf rather than change libimagequant0:armhf 417s Investigating (2) python3-pil.imagetk:armhf < none -> 11.1.0-5build1 @un uN Ib > 417s Broken python3-pil.imagetk:armhf Depends on python3-pil:armhf < none | 11.1.0-5build1 @un uH > (= 11.1.0-5build1) 417s Considering python3-pil:armhf 0 as a solution to python3-pil.imagetk:armhf 0 417s Holding Back python3-pil.imagetk:armhf rather than change python3-pil:armhf 417s Investigating (2) python3-ufolib2:armhf < none -> 0.17.0+dfsg1-1 @un uN Ib > 417s Broken python3-ufolib2:armhf Depends on python3-fonttools:armhf < none | 4.55.3-2build1 @un uH > (>= 4.29.1) 417s Considering python3-fonttools:armhf 0 as a solution to python3-ufolib2:armhf 0 417s Holding Back python3-ufolib2:armhf rather than change python3-fonttools:armhf 417s Investigating (2) python3-pandas-lib:armhf < none -> 2.2.3+dfsg-8build1 @un uN Ib > 417s Broken python3-pandas-lib:armhf Depends on python3-numpy2-abi0:armhf < none @un H > 417s Considering python3-numpy:armhf 1 as a solution to python3-pandas-lib:armhf 0 417s Holding Back python3-pandas-lib:armhf rather than change python3-numpy2-abi0:armhf 417s Broken python3-pandas-lib:armhf Depends on python3-numpy-abi9:armhf < none @un H > 417s Or group keep for python3-pandas-lib:armhf 417s Broken python3-pandas-lib:armhf Depends on python3-numpy:armhf < none | 1:2.2.3+ds-5 @un uH > 417s Considering python3-numpy:armhf 1 as a solution to python3-pandas-lib:armhf 0 417s Holding Back python3-pandas-lib:armhf rather than change python3-numpy:armhf 417s Investigating (2) debhelper:armhf < none -> 13.24.1ubuntu2 @un uN Ib > 417s Broken debhelper:armhf Depends on dh-autoreconf:armhf < none | 20 @un uH > (>= 17~) 417s Considering dh-autoreconf:armhf 0 as a solution to debhelper:armhf 0 417s Holding Back debhelper:armhf rather than change dh-autoreconf:armhf 417s Investigating (2) python3-reportlab:armhf < none -> 4.3.1-1 @un uN Ib > 417s Broken python3-reportlab:armhf Depends on python3-pil:armhf < none | 11.1.0-5build1 @un uH > 417s Considering python3-pil:armhf 0 as a solution to python3-reportlab:armhf 0 417s Holding Back python3-reportlab:armhf rather than change python3-pil:armhf 417s Investigating (2) python3-contourpy:armhf < none -> 1.3.1-1build1 @un uN Ib > 417s Broken python3-contourpy:armhf Depends on python3-numpy:armhf < none | 1:2.2.3+ds-5 @un uH > 417s Considering python3-numpy:armhf 1 as a solution to python3-contourpy:armhf 0 417s Holding Back python3-contourpy:armhf rather than change python3-numpy:armhf 417s Investigating (3) satisfy:command-line:armhf < none -> 1 @un puN Ib > 417s Broken satisfy:command-line:armhf Depends on cnvkit:armhf < none | 0.9.12-1 @un uH > 417s Considering cnvkit:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on debhelper-compat:armhf < none @un H > (= 13) 417s Considering debhelper:armhf 0 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-numpy:armhf < none | 1:2.2.3+ds-5 @un uH > 417s Considering python3-numpy:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-scipy:armhf < none | 1.14.1-4ubuntu2 @un uH > 417s Considering python3-scipy:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-matplotlib:armhf < none | 3.8.3-7build1 @un uH > 417s Considering python3-matplotlib:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-pomegranate:armhf < none | 0.15.0-1build1 @un uH > (>= 0.15) 417s Considering python3-pomegranate:armhf 0 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on r-bioc-dnacopy:armhf < none @un H > 417s Broken satisfy:command-line:armhf Depends on build-essential:armhf < none | 12.12 @un uH > 417s Considering build-essential:armhf 2 as a solution to satisfy:command-line:armhf 9998 417s Considering build-essential:armhf 2 as a solution to satisfy:command-line:armhf 9998 417s Investigating (3) python3-pandas:armhf < none -> 2.2.3+dfsg-8build1 @un uN Ib > 417s Broken python3-pandas:armhf Depends on python3-numpy:armhf < none | 1:2.2.3+ds-5 @un uH > (>= 1:1.23.2~) 417s Considering python3-numpy:armhf 1 as a solution to python3-pandas:armhf 1 417s Holding Back python3-pandas:armhf rather than change python3-numpy:armhf 417s Broken python3-pandas:armhf Depends on python3-supported-max:armhf < none @un H > (< 3.12) 417s Or group keep for python3-pandas:armhf 417s Broken python3-pandas:armhf Depends on python3-numpy:armhf < none | 1:2.2.3+ds-5 @un uH > 417s Considering python3-numpy:armhf 1 as a solution to python3-pandas:armhf 1 417s Holding Back python3-pandas:armhf rather than change python3-numpy:armhf 417s Investigating (3) pybuild-plugin-autopkgtest:armhf < none -> 6.20250308 @un uN Ib > 417s Broken pybuild-plugin-autopkgtest:armhf Depends on debhelper:armhf < none | 13.24.1ubuntu2 @un uH > 417s Considering debhelper:armhf 0 as a solution to pybuild-plugin-autopkgtest:armhf 1 417s Holding Back pybuild-plugin-autopkgtest:armhf rather than change debhelper:armhf 417s Investigating (3) python3-biopython:armhf < none -> 1.85+dfsg-2build1 @un uN Ib > 417s Broken python3-biopython:armhf Depends on python3-numpy:armhf < none | 1:2.2.3+ds-5 @un uH > 417s Considering python3-numpy:armhf 1 as a solution to python3-biopython:armhf 1 417s Holding Back python3-biopython:armhf rather than change python3-numpy:armhf 417s Investigating (4) satisfy:command-line:armhf < none -> 1 @un puN Ib > 417s Broken satisfy:command-line:armhf Depends on cnvkit:armhf < none | 0.9.12-1 @un uH > 417s Considering cnvkit:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on pybuild-plugin-autopkgtest:armhf < none | 6.20250308 @un uH > 417s Considering pybuild-plugin-autopkgtest:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on debhelper-compat:armhf < none @un H > (= 13) 417s Considering debhelper:armhf 0 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-biopython:armhf < none | 1.85+dfsg-2build1 @un uH > 417s Considering python3-biopython:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-pandas:armhf < none | 2.2.3+dfsg-8build1 @un uH > 417s Considering python3-pandas:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-numpy:armhf < none | 1:2.2.3+ds-5 @un uH > 417s Considering python3-numpy:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-scipy:armhf < none | 1.14.1-4ubuntu2 @un uH > 417s Considering python3-scipy:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-matplotlib:armhf < none | 3.8.3-7build1 @un uH > 417s Considering python3-matplotlib:armhf 1 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on python3-pomegranate:armhf < none | 0.15.0-1build1 @un uH > (>= 0.15) 417s Considering python3-pomegranate:armhf 0 as a solution to satisfy:command-line:armhf 9998 417s Broken satisfy:command-line:armhf Depends on r-bioc-dnacopy:armhf < none @un H > 417s Broken satisfy:command-line:armhf Depends on build-essential:armhf < none | 12.12 @un uH > 417s Considering build-essential:armhf 2 as a solution to satisfy:command-line:armhf 9998 417s Considering build-essential:armhf 2 as a solution to satisfy:command-line:armhf 9998 417s Done 417s Some packages could not be installed. This may mean that you have 417s requested an impossible situation or if you are using the unstable 417s distribution that some required packages have not yet been created 417s or been moved out of Incoming. 417s The following information may help to resolve the situation: 417s 417s The following packages have unmet dependencies: 418s satisfy:command-line : Depends: cnvkit but it is not going to be installed 418s Depends: pybuild-plugin-autopkgtest but it is not going to be installed 418s Depends: debhelper-compat (= 13) 418s Depends: python3-biopython but it is not going to be installed 418s Depends: python3-pandas but it is not going to be installed 418s Depends: python3-numpy but it is not going to be installed 418s Depends: python3-scipy but it is not going to be installed 418s Depends: python3-matplotlib but it is not going to be installed 418s Depends: python3-pomegranate (>= 0.15) but it is not going to be installed 418s Depends: r-bioc-dnacopy but it is not installable 418s Depends: build-essential but it is not going to be installed 418s E: Unable to correct problems, you have held broken packages. 418s pybuild-autopkgtest SKIP installation fails and skip-not-installable set 418s autopkgtest [01:34:30]: @@@@@@@@@@@@@@@@@@@@ summary 418s run-unit-test SKIP installation fails and skip-not-installable set 418s pybuild-autopkgtest SKIP installation fails and skip-not-installable set