0s autopkgtest [09:40:43]: starting date and time: 2024-11-13 09:40:43+0000 0s autopkgtest [09:40:43]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [09:40:43]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.cn1beswe/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade atropos --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- lxd -r lxd-armhf-10.145.243.234 lxd-armhf-10.145.243.234:autopkgtest/ubuntu/plucky/armhf 52s autopkgtest [09:41:35]: testbed dpkg architecture: armhf 54s autopkgtest [09:41:37]: testbed apt version: 2.9.8 54s autopkgtest [09:41:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup 62s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 62s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 62s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 62s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 63s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 63s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [79.5 kB] 63s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [567 kB] 63s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [16.1 kB] 63s Fetched 1684 kB in 1s (1817 kB/s) 63s Reading package lists... 80s tee: /proc/self/fd/2: Permission denied 102s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 102s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 102s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 102s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 104s Reading package lists... 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 105s Calculating upgrade... 105s The following packages were automatically installed and are no longer required: 105s libperl5.38t64 perl-modules-5.38 python3-netifaces 105s Use 'apt autoremove' to remove them. 105s The following NEW packages will be installed: 105s libperl5.40 perl-modules-5.40 python3.13-gdbm systemd-cryptsetup 105s The following packages will be upgraded: 105s apport apport-core-dump-handler base-files base-passwd bash-completion 105s dhcpcd-base distro-info-data dpkg dpkg-dev fwupd gcc-14-base info 105s install-info iproute2 libarchive13t64 libatomic1 libattr1 105s libblockdev-crypto3 libblockdev-fs3 libblockdev-loop3 libblockdev-mdraid3 105s libblockdev-nvme3 libblockdev-part3 libblockdev-swap3 libblockdev-utils3 105s libblockdev3 libbpf1 libbsd0 libbytesize-common libbytesize1 libdb5.3t64 105s libdpkg-perl libdrm-common libdrm2 libdw1t64 libedit2 libelf1t64 libevdev2 105s libfastjson4 libflashrom1 libftdi1-2 libfwupd2 libgcc-s1 libgpgme11t64 105s libinih1 libjson-c5 libjson-glib-1.0-0 libjson-glib-1.0-common libkeyutils1 105s libldap-common libldap2 liblocale-gettext-perl libmaxminddb0 libmnl0 105s libnetfilter-conntrack3 libnetplan1 libnghttp2-14 libnspr4 libnss-systemd 105s libnvme1t64 libpam-systemd libpipeline1 libplymouth5 libpng16-16t64 libpopt0 105s libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib 105s libsgutils2-1.46-2 libssh2-1t64 libstdc++6 libsystemd-shared libsystemd0 105s libtext-charwidth-perl libtext-iconv-perl libtraceevent1 105s libtraceevent1-plugin libudev1 libudisks2-0 liburcu8t64 libuv1t64 libx11-6 105s libx11-data libxau6 libxmlb2 mawk motd-news-config nano netplan-generator 105s netplan.io openssh-client openssh-server openssh-sftp-server pci.ids perl 105s perl-base plymouth plymouth-theme-ubuntu-text python3 python3-apport 105s python3-certifi python3-cffi-backend python3-configobj python3-gdbm 105s python3-gi python3-idna python3-jaraco.functools python3-json-pointer 105s python3-jsonpatch python3-lazr.restfulclient python3-lazr.uri 105s python3-minimal python3-more-itertools python3-netplan python3-oauthlib 105s python3-problem-report python3-typeguard python3-urllib3 python3-wadllib 105s python3-zipp python3.12 python3.12-gdbm python3.12-minimal sg3-utils 105s sg3-utils-udev ssh-import-id systemd systemd-resolved systemd-sysv 105s systemd-timesyncd tzdata udev udisks2 ufw usbutils vim-common vim-tiny xxd 106s 138 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 106s Need to get 44.4 MB of archives. 106s After this operation, 43.1 MB of additional disk space will be used. 106s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf motd-news-config all 13.5ubuntu3 [5190 B] 106s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf base-files armhf 13.5ubuntu3 [75.1 kB] 106s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf dpkg armhf 1.22.11ubuntu3 [1247 kB] 106s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf perl-modules-5.40 all 5.40.0-7 [3214 kB] 107s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf libperl5.40 armhf 5.40.0-7 [4139 kB] 108s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf perl armhf 5.40.0-7 [263 kB] 108s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf perl-base armhf 5.40.0-7 [1674 kB] 108s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf liblocale-gettext-perl armhf 1.07-7build1 [15.0 kB] 108s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf libtext-iconv-perl armhf 1.7-8build4 [12.8 kB] 108s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libtext-charwidth-perl armhf 0.04-11build4 [9128 B] 108s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-9 [655 kB] 108s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf base-passwd armhf 3.6.5 [53.2 kB] 108s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-minimal armhf 3.12.7-1 [27.4 kB] 108s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3 armhf 3.12.7-1 [24.0 kB] 108s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf tzdata all 2024b-1ubuntu2 [274 kB] 108s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf python3.12 armhf 3.12.7-3 [661 kB] 109s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.12-stdlib armhf 3.12.7-3 [1934 kB] 109s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf python3.12-minimal armhf 3.12.7-3 [2012 kB] 110s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.12-minimal armhf 3.12.7-3 [822 kB] 110s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpython3-stdlib armhf 3.12.7-1 [10.0 kB] 110s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf libnss-systemd armhf 256.5-2ubuntu4 [155 kB] 110s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf systemd-timesyncd armhf 256.5-2ubuntu4 [40.7 kB] 110s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf systemd-resolved armhf 256.5-2ubuntu4 [309 kB] 110s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf libsystemd-shared armhf 256.5-2ubuntu4 [2129 kB] 110s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libsystemd0 armhf 256.5-2ubuntu4 [428 kB] 110s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf systemd-sysv armhf 256.5-2ubuntu4 [11.9 kB] 110s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf libpam-systemd armhf 256.5-2ubuntu4 [226 kB] 110s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf systemd armhf 256.5-2ubuntu4 [3442 kB] 111s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf udev armhf 256.5-2ubuntu4 [1949 kB] 111s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf libudev1 armhf 256.5-2ubuntu4 [188 kB] 111s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf python3-problem-report all 2.30.0-0ubuntu5 [25.0 kB] 111s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf python3-apport all 2.30.0-0ubuntu5 [93.2 kB] 111s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf python3-gi armhf 3.50.0-3 [227 kB] 111s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf apport-core-dump-handler all 2.30.0-0ubuntu5 [17.9 kB] 111s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf apport all 2.30.0-0ubuntu5 [83.0 kB] 111s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libbsd0 armhf 0.12.2-2 [36.8 kB] 111s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libedit2 armhf 3.1-20240808-1 [79.0 kB] 111s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf openssh-sftp-server armhf 1:9.7p1-7ubuntu5 [35.4 kB] 111s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf openssh-server armhf 1:9.7p1-7ubuntu5 [505 kB] 111s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf openssh-client armhf 1:9.7p1-7ubuntu5 [889 kB] 111s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf libatomic1 armhf 14.2.0-8ubuntu1 [7846 B] 111s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-base armhf 14.2.0-8ubuntu1 [51.5 kB] 111s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++6 armhf 14.2.0-8ubuntu1 [711 kB] 111s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-s1 armhf 14.2.0-8ubuntu1 [40.8 kB] 111s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf libattr1 armhf 1:2.5.2-2 [10.5 kB] 111s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf install-info armhf 7.1.1-1 [61.4 kB] 111s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf mawk armhf 1.3.4.20240905-1 [116 kB] 111s Get:48 http://ftpmaster.internal/ubuntu plucky/main armhf dhcpcd-base armhf 1:10.1.0-2 [188 kB] 111s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf distro-info-data all 0.63 [6588 B] 111s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf libdw1t64 armhf 0.192-4 [243 kB] 111s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf libelf1t64 armhf 0.192-4 [50.2 kB] 111s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf libbpf1 armhf 1:1.5.0-1 [158 kB] 111s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf libmnl0 armhf 1.0.5-3 [10.7 kB] 111s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf iproute2 armhf 6.10.0-2ubuntu1 [1082 kB] 111s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf libfastjson4 armhf 1.2304.0-2 [20.2 kB] 111s Get:56 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-c5 armhf 0.18+ds-1 [33.2 kB] 111s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf libkeyutils1 armhf 1.6.3-4ubuntu2 [8712 B] 111s Get:58 http://ftpmaster.internal/ubuntu plucky/main armhf netplan-generator armhf 1.1.1-1 [60.4 kB] 111s Get:59 http://ftpmaster.internal/ubuntu plucky/main armhf python3-cffi-backend armhf 1.17.1-2 [68.7 kB] 111s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf python3-netplan armhf 1.1.1-1 [24.1 kB] 111s Get:61 http://ftpmaster.internal/ubuntu plucky/main armhf netplan.io armhf 1.1.1-1 [66.4 kB] 111s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf libnetplan1 armhf 1.1.1-1 [122 kB] 111s Get:63 http://ftpmaster.internal/ubuntu plucky/main armhf libpopt0 armhf 1.19+dfsg-2 [25.4 kB] 111s Get:64 http://ftpmaster.internal/ubuntu plucky/main armhf vim-tiny armhf 2:9.1.0777-1ubuntu1 [693 kB] 111s Get:65 http://ftpmaster.internal/ubuntu plucky/main armhf vim-common all 2:9.1.0777-1ubuntu1 [394 kB] 112s Get:66 http://ftpmaster.internal/ubuntu plucky/main armhf xxd armhf 2:9.1.0777-1ubuntu1 [66.8 kB] 112s Get:67 http://ftpmaster.internal/ubuntu plucky/main armhf bash-completion all 1:2.14.0-2 [210 kB] 112s Get:68 http://ftpmaster.internal/ubuntu plucky/main armhf info armhf 7.1.1-1 [126 kB] 112s Get:69 http://ftpmaster.internal/ubuntu plucky/main armhf libdrm-common all 2.4.123-1 [8436 B] 112s Get:70 http://ftpmaster.internal/ubuntu plucky/main armhf libdrm2 armhf 2.4.123-1 [36.5 kB] 112s Get:71 http://ftpmaster.internal/ubuntu plucky/main armhf libevdev2 armhf 1.13.3+dfsg-1 [29.7 kB] 112s Get:72 http://ftpmaster.internal/ubuntu plucky/main armhf libmaxminddb0 armhf 1.11.0-1 [16.8 kB] 112s Get:73 http://ftpmaster.internal/ubuntu plucky/main armhf libnetfilter-conntrack3 armhf 1.1.0-1 [38.4 kB] 112s Get:74 http://ftpmaster.internal/ubuntu plucky/main armhf libnghttp2-14 armhf 1.64.0-1 [68.9 kB] 112s Get:75 http://ftpmaster.internal/ubuntu plucky/main armhf libpipeline1 armhf 1.5.8-1 [26.9 kB] 112s Get:76 http://ftpmaster.internal/ubuntu plucky/main armhf libpng16-16t64 armhf 1.6.44-2 [168 kB] 112s Get:77 http://ftpmaster.internal/ubuntu plucky/main armhf libplymouth5 armhf 24.004.60-1ubuntu11 [140 kB] 112s Get:78 http://ftpmaster.internal/ubuntu plucky/main armhf libtraceevent1-plugin armhf 1:1.8.3-1ubuntu1 [18.1 kB] 112s Get:79 http://ftpmaster.internal/ubuntu plucky/main armhf libtraceevent1 armhf 1:1.8.3-1ubuntu1 [52.1 kB] 112s Get:80 http://ftpmaster.internal/ubuntu plucky/main armhf liburcu8t64 armhf 0.14.1-1 [56.6 kB] 112s Get:81 http://ftpmaster.internal/ubuntu plucky/main armhf libuv1t64 armhf 1.48.0-7 [83.3 kB] 112s Get:82 http://ftpmaster.internal/ubuntu plucky/main armhf libx11-data all 2:1.8.10-2 [116 kB] 112s Get:83 http://ftpmaster.internal/ubuntu plucky/main armhf libx11-6 armhf 2:1.8.10-2 [587 kB] 112s Get:84 http://ftpmaster.internal/ubuntu plucky/main armhf libxau6 armhf 1:1.0.11-1 [6558 B] 112s Get:85 http://ftpmaster.internal/ubuntu plucky/main armhf nano armhf 8.2-1 [276 kB] 112s Get:86 http://ftpmaster.internal/ubuntu plucky/main armhf pci.ids all 0.0~2024.10.24-1 [279 kB] 112s Get:87 http://ftpmaster.internal/ubuntu plucky/main armhf plymouth-theme-ubuntu-text armhf 24.004.60-1ubuntu11 [9920 B] 112s Get:88 http://ftpmaster.internal/ubuntu plucky/main armhf plymouth armhf 24.004.60-1ubuntu11 [142 kB] 112s Get:89 http://ftpmaster.internal/ubuntu plucky/main armhf python3.12-gdbm armhf 3.12.7-3 [28.7 kB] 112s Get:90 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-gdbm armhf 3.13.0-2 [29.5 kB] 112s Get:91 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-gdbm armhf 3.12.7-1 [8642 B] 112s Get:92 http://ftpmaster.internal/ubuntu plucky/main armhf ufw all 0.36.2-8 [170 kB] 112s Get:93 http://ftpmaster.internal/ubuntu plucky/main armhf usbutils armhf 1:018-1 [76.1 kB] 112s Get:94 http://ftpmaster.internal/ubuntu plucky/main armhf dpkg-dev all 1.22.11ubuntu3 [1088 kB] 112s Get:95 http://ftpmaster.internal/ubuntu plucky/main armhf libdpkg-perl all 1.22.11ubuntu3 [279 kB] 112s Get:96 http://ftpmaster.internal/ubuntu plucky/main armhf libarchive13t64 armhf 3.7.4-1.1 [331 kB] 112s Get:97 http://ftpmaster.internal/ubuntu plucky/main armhf libftdi1-2 armhf 1.5-7 [25.7 kB] 112s Get:98 http://ftpmaster.internal/ubuntu plucky/main armhf libflashrom1 armhf 1.4.0-3ubuntu1 [141 kB] 112s Get:99 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-common all 1.10.0+ds-2 [5502 B] 112s Get:100 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-0 armhf 1.10.0+ds-2 [61.6 kB] 112s Get:101 http://ftpmaster.internal/ubuntu plucky/main armhf libfwupd2 armhf 1.9.26-2 [125 kB] 112s Get:102 http://ftpmaster.internal/ubuntu plucky/main armhf libxmlb2 armhf 0.3.21-1 [57.7 kB] 112s Get:103 http://ftpmaster.internal/ubuntu plucky/main armhf fwupd armhf 1.9.26-2 [4404 kB] 113s Get:104 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-utils3 armhf 3.2.1-1 [17.4 kB] 113s Get:105 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-crypto3 armhf 3.2.1-1 [22.4 kB] 113s Get:106 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-fs3 armhf 3.2.1-1 [34.3 kB] 113s Get:107 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-loop3 armhf 3.2.1-1 [6552 B] 113s Get:108 http://ftpmaster.internal/ubuntu plucky/main armhf libbytesize1 armhf 2.11-1ubuntu1 [12.0 kB] 113s Get:109 http://ftpmaster.internal/ubuntu plucky/main armhf libbytesize-common all 2.11-1ubuntu1 [3584 B] 113s Get:110 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-mdraid3 armhf 3.2.1-1 [13.4 kB] 113s Get:111 http://ftpmaster.internal/ubuntu plucky/main armhf libnvme1t64 armhf 1.11-1 [73.8 kB] 113s Get:112 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-nvme3 armhf 3.2.1-1 [17.6 kB] 113s Get:113 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-part3 armhf 3.2.1-1 [16.5 kB] 113s Get:114 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev-swap3 armhf 3.2.1-1 [8952 B] 113s Get:115 http://ftpmaster.internal/ubuntu plucky/main armhf libblockdev3 armhf 3.2.1-1 [44.2 kB] 113s Get:116 http://ftpmaster.internal/ubuntu plucky/main armhf libgpgme11t64 armhf 1.23.2-5ubuntu4 [123 kB] 113s Get:117 http://ftpmaster.internal/ubuntu plucky/main armhf libinih1 armhf 58-1ubuntu1 [6750 B] 113s Get:118 http://ftpmaster.internal/ubuntu plucky/main armhf libldap-common all 2.6.8+dfsg-1~exp4ubuntu3 [32.3 kB] 113s Get:119 http://ftpmaster.internal/ubuntu plucky/main armhf libldap2 armhf 2.6.8+dfsg-1~exp4ubuntu3 [173 kB] 113s Get:120 http://ftpmaster.internal/ubuntu plucky/main armhf libnspr4 armhf 2:4.35-1.1ubuntu2 [94.1 kB] 113s Get:121 http://ftpmaster.internal/ubuntu plucky/main armhf libsgutils2-1.46-2 armhf 1.46-3ubuntu5 [82.5 kB] 113s Get:122 http://ftpmaster.internal/ubuntu plucky/main armhf libssh2-1t64 armhf 1.11.1-1 [116 kB] 113s Get:123 http://ftpmaster.internal/ubuntu plucky/main armhf udisks2 armhf 2.10.1-11ubuntu1 [278 kB] 113s Get:124 http://ftpmaster.internal/ubuntu plucky/main armhf libudisks2-0 armhf 2.10.1-11ubuntu1 [142 kB] 113s Get:125 http://ftpmaster.internal/ubuntu plucky/main armhf python3-certifi all 2024.8.30+dfsg-1 [9742 B] 113s Get:126 http://ftpmaster.internal/ubuntu plucky/main armhf python3-configobj all 5.0.9-1 [33.9 kB] 113s Get:127 http://ftpmaster.internal/ubuntu plucky/main armhf python3-idna all 3.8-2 [47.0 kB] 113s Get:128 http://ftpmaster.internal/ubuntu plucky/main armhf python3-more-itertools all 10.5.0-1 [56.2 kB] 113s Get:129 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jaraco.functools all 4.1.0-1 [11.8 kB] 113s Get:130 http://ftpmaster.internal/ubuntu plucky/main armhf python3-json-pointer all 2.4-2 [8396 B] 113s Get:131 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jsonpatch all 1.32-4 [12.2 kB] 113s Get:132 http://ftpmaster.internal/ubuntu plucky/main armhf python3-lazr.uri all 1.0.6-4 [13.6 kB] 114s Get:133 http://ftpmaster.internal/ubuntu plucky/main armhf python3-wadllib all 2.0.0-1 [36.7 kB] 114s Get:134 http://ftpmaster.internal/ubuntu plucky/main armhf python3-oauthlib all 3.2.2-2 [89.8 kB] 114s Get:135 http://ftpmaster.internal/ubuntu plucky/main armhf python3-lazr.restfulclient all 0.14.6-2 [50.9 kB] 114s Get:136 http://ftpmaster.internal/ubuntu plucky/main armhf python3-typeguard all 4.4.1-1 [29.0 kB] 114s Get:137 http://ftpmaster.internal/ubuntu plucky/main armhf python3-urllib3 all 2.0.7-2ubuntu0.1 [93.1 kB] 114s Get:138 http://ftpmaster.internal/ubuntu plucky/main armhf python3-zipp all 3.21.0-1 [10.2 kB] 114s Get:139 http://ftpmaster.internal/ubuntu plucky/main armhf sg3-utils armhf 1.46-3ubuntu5 [816 kB] 114s Get:140 http://ftpmaster.internal/ubuntu plucky/main armhf sg3-utils-udev all 1.46-3ubuntu5 [5916 B] 114s Get:141 http://ftpmaster.internal/ubuntu plucky/main armhf systemd-cryptsetup armhf 256.5-2ubuntu4 [122 kB] 114s Get:142 http://ftpmaster.internal/ubuntu plucky/main armhf ssh-import-id all 5.11-0ubuntu3 [10.1 kB] 114s Preconfiguring packages ... 115s Fetched 44.4 MB in 8s (5348 kB/s) 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59386 files and directories currently installed.) 115s Preparing to unpack .../motd-news-config_13.5ubuntu3_all.deb ... 115s Unpacking motd-news-config (13.5ubuntu3) over (13.3ubuntu6) ... 115s Preparing to unpack .../base-files_13.5ubuntu3_armhf.deb ... 115s Unpacking base-files (13.5ubuntu3) over (13.3ubuntu6) ... 115s Setting up base-files (13.5ubuntu3) ... 115s Installing new version of config file /etc/issue ... 115s Installing new version of config file /etc/issue.net ... 115s Installing new version of config file /etc/lsb-release ... 116s motd-news.service is a disabled or a static unit not running, not starting it. 116s (Reading database ... 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udisks2 (2.10.1-11ubuntu1) ... 135s vda: Failed to write 'change' to '/sys/devices/pci0000:00/0000:00:01.3/0000:04:00.0/virtio2/block/vda/uevent': Permission denied 135s vda1: Failed to write 'change' to '/sys/devices/pci0000:00/0000:00:01.3/0000:04:00.0/virtio2/block/vda/vda1/uevent': Permission denied 135s vda15: Failed to write 'change' to '/sys/devices/pci0000:00/0000:00:01.3/0000:04:00.0/virtio2/block/vda/vda15/uevent': Permission denied 135s vda2: Failed to write 'change' to '/sys/devices/pci0000:00/0000:00:01.3/0000:04:00.0/virtio2/block/vda/vda2/uevent': Permission denied 135s loop0: Failed to write 'change' to '/sys/devices/virtual/block/loop0/uevent': Permission denied 135s loop1: Failed to write 'change' to '/sys/devices/virtual/block/loop1/uevent': Permission denied 135s loop2: Failed to write 'change' to '/sys/devices/virtual/block/loop2/uevent': Permission denied 135s loop3: Failed to write 'change' to '/sys/devices/virtual/block/loop3/uevent': Permission denied 135s loop4: Failed to write 'change' to '/sys/devices/virtual/block/loop4/uevent': Permission denied 135s loop5: Failed to write 'change' to '/sys/devices/virtual/block/loop5/uevent': Permission denied 135s loop6: Failed to write 'change' to '/sys/devices/virtual/block/loop6/uevent': Permission denied 135s loop7: Failed to write 'change' to '/sys/devices/virtual/block/loop7/uevent': Permission denied 135s loop8: Failed to write 'change' to '/sys/devices/virtual/block/loop8/uevent': Permission denied 135s Setting up systemd-sysv (256.5-2ubuntu4) ... 135s Setting up openssh-server (1:9.7p1-7ubuntu5) ... 136s Setting up plymouth (24.004.60-1ubuntu11) ... 136s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 137s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 137s Setting up libfwupd2:armhf (1.9.26-2) ... 137s Setting up libnss-systemd:armhf (256.5-2ubuntu4) ... 137s Setting up python3 (3.12.7-1) ... 137s Setting up python3-zipp (3.21.0-1) ... 137s Setting up dpkg-dev (1.22.11ubuntu3) ... 137s Setting up plymouth-theme-ubuntu-text (24.004.60-1ubuntu11) ... 137s update-initramfs: deferring update (trigger activated) 137s Setting up python3-oauthlib (3.2.2-2) ... 138s Setting up python3-configobj (5.0.9-1) ... 138s Setting up python3-certifi (2024.8.30+dfsg-1) ... 138s Setting up python3-gi (3.50.0-3) ... 138s Setting up python3-idna (3.8-2) ... 138s Setting up python3-urllib3 (2.0.7-2ubuntu0.1) ... 138s Setting up python3-json-pointer (2.4-2) ... 139s Setting up libpam-systemd:armhf (256.5-2ubuntu4) ... 139s Setting up fwupd (1.9.26-2) ... 139s fwupd-offline-update.service is a disabled or a static unit not running, not starting it. 139s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 139s fwupd.service is a disabled or a static unit not running, not starting it. 139s Setting up python3-cffi-backend:armhf (1.17.1-2) ... 139s Setting up python3-more-itertools (10.5.0-1) ... 140s Setting up python3-jaraco.functools (4.1.0-1) ... 140s Setting up python3-gdbm:armhf (3.12.7-1) ... 140s Setting up python3-problem-report (2.30.0-0ubuntu5) ... 140s Setting up ssh-import-id (5.11-0ubuntu3) ... 140s Setting up python3-jsonpatch (1.32-4) ... 140s Setting up python3-typeguard (4.4.1-1) ... 140s Setting up ufw (0.36.2-8) ... 141s Setting up python3-lazr.uri (1.0.6-4) ... 141s Setting up python3-apport (2.30.0-0ubuntu5) ... 142s Setting up python3-wadllib (2.0.0-1) ... 142s Setting up python3-netplan (1.1.1-1) ... 142s Setting up python3-lazr.restfulclient (0.14.6-2) ... 142s Setting up netplan.io (1.1.1-1) ... 142s Setting up apport-core-dump-handler (2.30.0-0ubuntu5) ... 143s Setting up apport (2.30.0-0ubuntu5) ... 143s Installing new version of config file /etc/apport/crashdb.conf ... 143s apport-autoreport.service is a disabled or a static unit not running, not starting it. 143s Processing triggers for dbus (1.14.10-4ubuntu5) ... 143s Processing triggers for shared-mime-info (2.4-5) ... 144s Processing triggers for install-info (7.1.1-1) ... 144s Processing triggers for initramfs-tools (0.142ubuntu34) ... 144s Processing triggers for libc-bin (2.40-1ubuntu3) ... 144s Processing triggers for rsyslog (8.2406.0-1ubuntu2) ... 144s Processing triggers for man-db (2.12.1-3) ... 146s Reading package lists... 146s Building dependency tree... 146s Reading state information... 147s The following packages will be REMOVED: 147s libperl5.38t64* perl-modules-5.38* python3-netifaces* 147s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 147s After this operation, 41.7 MB disk space will be freed. 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61506 files and directories currently installed.) 148s Removing libperl5.38t64:armhf (5.38.2-5) ... 148s Removing perl-modules-5.38 (5.38.2-5) ... 148s Removing python3-netifaces:armhf (0.11.0-2build3) ... 148s Processing triggers for man-db (2.12.1-3) ... 148s Processing triggers for libc-bin (2.40-1ubuntu3) ... 150s autopkgtest [09:43:13]: rebooting testbed after setup commands that affected boot 218s autopkgtest [09:44:21]: testbed running kernel: Linux 6.8.0-47-generic #47~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Oct 2 16:39:14 UTC 2 245s autopkgtest [09:44:48]: @@@@@@@@@@@@@@@@@@@@ apt-source atropos 256s Get:1 http://ftpmaster.internal/ubuntu plucky/universe atropos 1.1.32+dfsg-2 (dsc) [2234 B] 256s Get:2 http://ftpmaster.internal/ubuntu plucky/universe atropos 1.1.32+dfsg-2 (tar) [3117 kB] 256s Get:3 http://ftpmaster.internal/ubuntu plucky/universe atropos 1.1.32+dfsg-2 (diff) [6800 B] 256s gpgv: Signature made Wed Jul 31 09:03:58 2024 UTC 256s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 256s gpgv: Can't check signature: No public key 256s dpkg-source: warning: cannot verify inline signature for ./atropos_1.1.32+dfsg-2.dsc: no acceptable signature found 256s autopkgtest [09:44:59]: testing package atropos version 1.1.32+dfsg-2 258s autopkgtest [09:45:01]: build not needed 262s autopkgtest [09:45:05]: test run-unit-test: preparing testbed 272s Reading package lists... 273s Building dependency tree... 273s Reading state information... 273s Starting pkgProblemResolver with broken count: 0 273s Starting 2 pkgProblemResolver with broken count: 0 273s Done 274s The following additional packages will be installed: 274s atropos libdeflate0 libhts3t64 libhtscodecs2 libpython3.13-minimal 274s libpython3.13-stdlib python3-all python3-iniconfig python3-packaging 274s python3-pluggy python3-pysam python3-pytest python3.13 python3.13-minimal 274s Suggested packages: 274s python3.13-venv python3.13-doc binfmt-support 274s The following NEW packages will be installed: 274s atropos autopkgtest-satdep libdeflate0 libhts3t64 libhtscodecs2 274s libpython3.13-minimal libpython3.13-stdlib python3-all python3-iniconfig 274s python3-packaging python3-pluggy python3-pysam python3-pytest python3.13 274s python3.13-minimal 274s 0 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. 274s Need to get 9828 kB/9828 kB of archives. 274s After this operation, 55.3 MB of additional disk space will be used. 274s Get:1 /tmp/autopkgtest.KOpcqI/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [720 B] 274s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-minimal armhf 3.13.0-2 [866 kB] 275s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-minimal armhf 3.13.0-2 [1854 kB] 275s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.22-1 [38.9 kB] 275s Get:5 http://ftpmaster.internal/ubuntu plucky/universe armhf libhtscodecs2 armhf 1.6.1-1 [67.9 kB] 275s Get:6 http://ftpmaster.internal/ubuntu plucky/universe armhf libhts3t64 armhf 1.20+ds-1 [392 kB] 275s Get:7 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pysam armhf 0.22.1+ds-2 [3383 kB] 275s Get:8 http://ftpmaster.internal/ubuntu plucky/universe armhf atropos armhf 1.1.32+dfsg-2 [215 kB] 275s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-stdlib armhf 3.13.0-2 [1972 kB] 275s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13 armhf 3.13.0-2 [719 kB] 275s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-all armhf 3.12.7-1 [890 B] 275s Get:12 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 275s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf python3-packaging all 24.1-1 [41.4 kB] 275s Get:14 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 275s Get:15 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest all 8.3.3-1 [251 kB] 276s Fetched 9828 kB in 1s (8339 kB/s) 276s Selecting previously unselected package libpython3.13-minimal:armhf. 276s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59566 files and directories currently installed.) 276s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_armhf.deb ... 276s Unpacking libpython3.13-minimal:armhf (3.13.0-2) ... 276s Selecting previously unselected package python3.13-minimal. 276s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_armhf.deb ... 276s Unpacking python3.13-minimal (3.13.0-2) ... 276s Selecting previously unselected package libdeflate0:armhf. 276s Preparing to unpack .../02-libdeflate0_1.22-1_armhf.deb ... 276s Unpacking libdeflate0:armhf (1.22-1) ... 276s Selecting previously unselected package libhtscodecs2:armhf. 276s Preparing to unpack .../03-libhtscodecs2_1.6.1-1_armhf.deb ... 276s Unpacking libhtscodecs2:armhf (1.6.1-1) ... 276s Selecting previously unselected package libhts3t64:armhf. 276s Preparing to unpack .../04-libhts3t64_1.20+ds-1_armhf.deb ... 276s Unpacking libhts3t64:armhf (1.20+ds-1) ... 276s Selecting previously unselected package python3-pysam. 276s Preparing to unpack .../05-python3-pysam_0.22.1+ds-2_armhf.deb ... 276s Unpacking python3-pysam (0.22.1+ds-2) ... 276s Selecting previously unselected package atropos. 276s Preparing to unpack .../06-atropos_1.1.32+dfsg-2_armhf.deb ... 276s Unpacking atropos (1.1.32+dfsg-2) ... 276s Selecting previously unselected package libpython3.13-stdlib:armhf. 276s Preparing to unpack .../07-libpython3.13-stdlib_3.13.0-2_armhf.deb ... 276s Unpacking libpython3.13-stdlib:armhf (3.13.0-2) ... 276s Selecting previously unselected package python3.13. 276s Preparing to unpack .../08-python3.13_3.13.0-2_armhf.deb ... 276s Unpacking python3.13 (3.13.0-2) ... 276s Selecting previously unselected package python3-all. 276s Preparing to unpack .../09-python3-all_3.12.7-1_armhf.deb ... 276s Unpacking python3-all (3.12.7-1) ... 276s Selecting previously unselected package python3-iniconfig. 276s Preparing to unpack .../10-python3-iniconfig_1.1.1-2_all.deb ... 276s Unpacking python3-iniconfig (1.1.1-2) ... 276s Selecting previously unselected package python3-packaging. 276s Preparing to unpack .../11-python3-packaging_24.1-1_all.deb ... 276s Unpacking python3-packaging (24.1-1) ... 276s Selecting previously unselected package python3-pluggy. 277s Preparing to unpack .../12-python3-pluggy_1.5.0-1_all.deb ... 277s Unpacking python3-pluggy (1.5.0-1) ... 277s Selecting previously unselected package python3-pytest. 277s Preparing to unpack .../13-python3-pytest_8.3.3-1_all.deb ... 277s Unpacking python3-pytest (8.3.3-1) ... 277s Selecting previously unselected package autopkgtest-satdep. 277s Preparing to unpack .../14-1-autopkgtest-satdep.deb ... 277s Unpacking autopkgtest-satdep (0) ... 277s Setting up libhtscodecs2:armhf (1.6.1-1) ... 277s Setting up python3-iniconfig (1.1.1-2) ... 277s Setting up libdeflate0:armhf (1.22-1) ... 277s Setting up libpython3.13-minimal:armhf (3.13.0-2) ... 277s Setting up python3-packaging (24.1-1) ... 277s Setting up python3-pluggy (1.5.0-1) ... 277s Setting up libhts3t64:armhf (1.20+ds-1) ... 277s Setting up python3.13-minimal (3.13.0-2) ... 278s Setting up libpython3.13-stdlib:armhf (3.13.0-2) ... 278s Setting up python3-pysam (0.22.1+ds-2) ... 279s Setting up python3.13 (3.13.0-2) ... 280s Setting up python3-pytest (8.3.3-1) ... 281s Setting up atropos (1.1.32+dfsg-2) ... 281s Setting up python3-all (3.12.7-1) ... 281s Setting up autopkgtest-satdep (0) ... 281s Processing triggers for systemd (256.5-2ubuntu4) ... 281s Processing triggers for man-db (2.12.1-3) ... 282s Processing triggers for libc-bin (2.40-1ubuntu3) ... 293s (Reading database ... 60908 files and directories currently installed.) 293s Removing autopkgtest-satdep (0) ... 299s autopkgtest [09:45:42]: test run-unit-test: [----------------------- 302s ============================= test session starts ============================== 302s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 302s cachedir: .pytest_cache 302s rootdir: /tmp/autopkgtest.KOpcqI/autopkgtest_tmp 302s plugins: typeguard-4.4.1 303s collecting ... collected 137 items / 8 errors 303s 303s ==================================== ERRORS ==================================== 303s ___________________ ERROR collecting tests/test_adapters.py ____________________ 303s ImportError while importing test module '/tmp/autopkgtest.KOpcqI/autopkgtest_tmp/tests/test_adapters.py'. 303s Hint: make sure your test modules/packages have valid Python names. 303s Traceback: 303s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 303s return _bootstrap._gcd_import(name[level:], package, level) 303s tests/test_adapters.py:3: in 303s from atropos.adapters import ( 303s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 303s from atropos import align 303s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 303s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 303s E ModuleNotFoundError: No module named 'atropos.align._align' 303s _____________________ ERROR collecting tests/test_align.py _____________________ 303s ImportError while importing test module '/tmp/autopkgtest.KOpcqI/autopkgtest_tmp/tests/test_align.py'. 303s Hint: make sure your test modules/packages have valid Python names. 303s Traceback: 303s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 303s return _bootstrap._gcd_import(name[level:], package, level) 303s tests/test_align.py:4: in 303s from atropos.adapters import BACK 303s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 303s from atropos import align 303s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 303s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 303s E ModuleNotFoundError: No module named 'atropos.align._align' 303s ___________________ ERROR collecting tests/test_commands.py ____________________ 303s ImportError while importing test module '/tmp/autopkgtest.KOpcqI/autopkgtest_tmp/tests/test_commands.py'. 303s Hint: make sure your test modules/packages have valid Python names. 303s Traceback: 303s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 303s return _bootstrap._gcd_import(name[level:], package, level) 303s tests/test_commands.py:3: in 303s from atropos.commands.trim.multicore import OrderPreservingWriterResultHandler 303s /usr/lib/python3/dist-packages/atropos/commands/trim/__init__.py:8: in 303s from atropos.commands.base import ( 303s /usr/lib/python3/dist-packages/atropos/commands/base.py:8: in 303s from atropos.adapters import AdapterCache 303s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 303s from atropos import align 303s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 303s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 303s E ModuleNotFoundError: No module named 'atropos.align._align' 303s ____________________ ERROR collecting tests/test_filters.py ____________________ 303s ImportError while importing test module '/tmp/autopkgtest.KOpcqI/autopkgtest_tmp/tests/test_filters.py'. 303s Hint: make sure your test modules/packages have valid Python names. 303s Traceback: 303s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 303s return _bootstrap._gcd_import(name[level:], package, level) 303s tests/test_filters.py:5: in 303s from atropos.commands.trim.filters import ( 303s /usr/lib/python3/dist-packages/atropos/commands/trim/__init__.py:8: in 303s from atropos.commands.base import ( 303s /usr/lib/python3/dist-packages/atropos/commands/base.py:8: in 303s from atropos.adapters import AdapterCache 303s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 303s from atropos import align 303s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 303s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 303s E ModuleNotFoundError: No module named 'atropos.align._align' 303s ___________________ ERROR collecting tests/test_modifiers.py ___________________ 303s ImportError while importing test module '/tmp/autopkgtest.KOpcqI/autopkgtest_tmp/tests/test_modifiers.py'. 303s Hint: make sure your test modules/packages have valid Python names. 303s Traceback: 303s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 303s return _bootstrap._gcd_import(name[level:], package, level) 303s tests/test_modifiers.py:2: in 303s from atropos.adapters import * 303s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 303s from atropos import align 303s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 303s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 303s E ModuleNotFoundError: No module named 'atropos.align._align' 303s ___________________ ERROR collecting tests/test_qualtrim.py ____________________ 303s ImportError while importing test module '/tmp/autopkgtest.KOpcqI/autopkgtest_tmp/tests/test_qualtrim.py'. 303s Hint: make sure your test modules/packages have valid Python names. 303s Traceback: 303s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 303s return _bootstrap._gcd_import(name[level:], package, level) 303s tests/test_qualtrim.py:2: in 303s from atropos.commands.trim.qualtrim import nextseq_trim_index 303s /usr/lib/python3/dist-packages/atropos/commands/trim/__init__.py:8: in 303s from atropos.commands.base import ( 303s /usr/lib/python3/dist-packages/atropos/commands/base.py:8: in 303s from atropos.adapters import AdapterCache 303s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 303s from atropos import align 303s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 303s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 303s E ModuleNotFoundError: No module named 'atropos.align._align' 303s _____________________ ERROR collecting tests/test_seqio.py _____________________ 303s tests/test_seqio.py:10: in 303s from atropos.io.seqio import ( 303s /usr/lib/python3/dist-packages/atropos/io/seqio.py:108: in 303s class ColorspaceSequence(Sequence): 303s E NameError: name 'Sequence' is not defined 303s _____________________ ERROR collecting tests/test_trim.py ______________________ 303s ImportError while importing test module '/tmp/autopkgtest.KOpcqI/autopkgtest_tmp/tests/test_trim.py'. 303s Hint: make sure your test modules/packages have valid Python names. 303s Traceback: 303s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 303s return _bootstrap._gcd_import(name[level:], package, level) 303s tests/test_trim.py:2: in 303s from atropos.adapters import Adapter, ColorspaceAdapter, PREFIX, BACK 303s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 303s from atropos import align 303s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 303s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 303s E ModuleNotFoundError: No module named 'atropos.align._align' 303s =============================== warnings summary =============================== 303s tests/test_paired.py:638 303s /tmp/autopkgtest.KOpcqI/autopkgtest_tmp/tests/test_paired.py:638: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 303s @pytest.mark.timeout(10) 303s 303s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 303s =========================== short test summary info ============================ 303s ERROR tests/test_adapters.py 303s ERROR tests/test_align.py 303s ERROR tests/test_commands.py 303s ERROR tests/test_filters.py 303s ERROR tests/test_modifiers.py 303s ERROR tests/test_qualtrim.py 303s ERROR tests/test_seqio.py - NameError: name 'Sequence' is not defined 303s ERROR tests/test_trim.py 303s !!!!!!!!!!!!!!!!!!! Interrupted: 8 errors during collection !!!!!!!!!!!!!!!!!!!! 303s ========================= 1 warning, 8 errors in 1.26s ========================= 303s autopkgtest [09:45:46]: test run-unit-test: -----------------------] 308s run-unit-test FAIL non-zero exit status 2 308s autopkgtest [09:45:51]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 312s autopkgtest [09:45:55]: @@@@@@@@@@@@@@@@@@@@ summary 312s run-unit-test FAIL non-zero exit status 2