0s autopkgtest [17:24:05]: starting date and time: 2025-03-15 17:24:05+0000 0s autopkgtest [17:24:05]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [17:24:05]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.05ng0n9d/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade vt --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-29.secgroup --name adt-plucky-arm64-vt-20250315-172405-juju-7f2275-prod-proposed-migration-environment-2-951d8946-9bcb-416b-8af9-0d0c9f99af1d --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 184s autopkgtest [17:27:09]: testbed dpkg architecture: arm64 184s autopkgtest [17:27:09]: testbed apt version: 2.9.33 184s autopkgtest [17:27:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 185s autopkgtest [17:27:10]: testbed release detected to be: None 186s autopkgtest [17:27:11]: updating testbed package index (apt update) 187s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 187s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 187s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 187s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 187s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 187s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 188s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 188s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 188s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1856 B] 188s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 188s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [324 kB] 188s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [14.7 kB] 188s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 188s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [268 B] 188s Fetched 1078 kB in 2s (648 kB/s) 189s Reading package lists... 190s Reading package lists... 190s Building dependency tree... 190s Reading state information... 191s Calculating upgrade... 191s Calculating upgrade... 191s The following packages will be upgraded: 191s pinentry-curses python3-jinja2 strace 192s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 192s Need to get 647 kB of archives. 192s After this operation, 11.3 kB of additional disk space will be used. 192s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 192s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-2ubuntu3 [39.2 kB] 192s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 193s Fetched 647 kB in 1s (609 kB/s) 193s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 193s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 193s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 193s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_arm64.deb ... 193s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 193s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 194s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 194s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 194s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 194s Setting up strace (6.13+ds-1ubuntu1) ... 194s Processing triggers for man-db (2.13.0-1) ... 195s Reading package lists... 195s Building dependency tree... 195s Reading state information... 195s Solving dependencies... 196s The following packages will be REMOVED: 196s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 196s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 196s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 196s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 196s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 196s After this operation, 267 MB disk space will be freed. 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 196s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 196s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 196s Removing libpython3.12t64:arm64 (3.12.9-1) ... 196s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 196s Removing libnsl2:arm64 (1.3.0-3build3) ... 196s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 196s Removing libunwind8:arm64 (1.6.2-3.1) ... 196s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 197s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 199s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 199s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 199s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 199s /etc/kernel/postrm.d/initramfs-tools: 199s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 199s /etc/kernel/postrm.d/zz-flash-kernel: 199s flash-kernel: Kernel 6.11.0-8-generic has been removed. 199s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 199s /etc/kernel/postrm.d/zz-update-grub: 199s Sourcing file `/etc/default/grub' 199s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 199s Generating grub configuration file ... 199s Found linux image: /boot/vmlinuz-6.14.0-10-generic 199s Found initrd image: /boot/initrd.img-6.14.0-10-generic 200s Warning: os-prober will not be executed to detect other bootable partitions. 200s Systems on them will not be added to the GRUB boot configuration. 200s Check GRUB_DISABLE_OS_PROBER documentation entry. 200s Adding boot menu entry for UEFI Firmware Settings ... 200s done 200s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 200s Processing triggers for libc-bin (2.41-1ubuntu1) ... 200s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 200s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 200s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 200s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 201s autopkgtest [17:27:26]: upgrading testbed (apt dist-upgrade and autopurge) 201s Reading package lists... 201s Building dependency tree... 201s Reading state information... 202s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 202s Starting 2 pkgProblemResolver with broken count: 0 202s Done 202s Entering ResolveByKeep 203s 203s Calculating upgrade... 203s The following packages will be upgraded: 203s libc-bin libc-dev-bin libc6 libc6-dev locales 204s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 204s Need to get 9530 kB of archives. 204s After this operation, 0 B of additional disk space will be used. 204s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 205s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 205s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 208s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 209s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 212s Preconfiguring packages ... 213s Fetched 9530 kB in 9s (1090 kB/s) 213s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 213s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 213s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 213s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 213s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 213s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 213s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 213s Setting up libc6:arm64 (2.41-1ubuntu2) ... 213s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 213s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 213s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 213s Setting up libc-bin (2.41-1ubuntu2) ... 214s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 214s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 214s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 214s Setting up locales (2.41-1ubuntu2) ... 215s Generating locales (this might take a while)... 216s en_US.UTF-8... done 216s Generation complete. 216s Setting up libc-dev-bin (2.41-1ubuntu2) ... 216s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 216s Processing triggers for man-db (2.13.0-1) ... 217s Processing triggers for systemd (257.3-1ubuntu3) ... 219s Reading package lists... 219s Building dependency tree... 219s Reading state information... 219s Starting pkgProblemResolver with broken count: 0 219s Starting 2 pkgProblemResolver with broken count: 0 219s Done 220s Solving dependencies... 220s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 220s autopkgtest [17:27:45]: rebooting testbed after setup commands that affected boot 244s autopkgtest [17:28:09]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 247s autopkgtest [17:28:12]: @@@@@@@@@@@@@@@@@@@@ apt-source vt 266s Get:1 http://ftpmaster.internal/ubuntu plucky/universe vt 0.57721+ds-3build2 (dsc) [2240 B] 266s Get:2 http://ftpmaster.internal/ubuntu plucky/universe vt 0.57721+ds-3build2 (tar) [18.6 MB] 266s Get:3 http://ftpmaster.internal/ubuntu plucky/universe vt 0.57721+ds-3build2 (diff) [8272 B] 266s gpgv: Signature made Mon Apr 1 08:33:26 2024 UTC 266s gpgv: using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984 266s gpgv: Can't check signature: No public key 266s dpkg-source: warning: cannot verify inline signature for ./vt_0.57721+ds-3build2.dsc: no acceptable signature found 266s autopkgtest [17:28:31]: testing package vt version 0.57721+ds-3build2 267s autopkgtest [17:28:32]: build not needed 271s autopkgtest [17:28:36]: test basic: preparing testbed 271s Reading package lists... 271s Building dependency tree... 271s Reading state information... 272s Starting pkgProblemResolver with broken count: 0 272s Starting 2 pkgProblemResolver with broken count: 0 272s Done 272s The following NEW packages will be installed: 272s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 272s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1 272s libgraphite2-3 libharfbuzz0b libhts3t64 libhtscodecs2 libice6 libjbig0 272s libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 libpango-1.0-0 272s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 272s libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 272s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 272s r-base-core unzip vt vt-examples x11-common xdg-utils zip 273s 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. 273s Need to get 57.8 MB of archives. 273s After this operation, 101 MB of additional disk space will be used. 273s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 273s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 274s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 274s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 274s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 274s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 275s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 275s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 275s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 275s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 275s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 275s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 275s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 275s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 276s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 276s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 276s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 276s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtscodecs2 arm64 1.6.1-2 [82.7 kB] 277s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhts3t64 arm64 1.21+ds-1 [441 kB] 277s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 277s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 277s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 277s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 277s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 279s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 279s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 280s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 280s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB] 280s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB] 280s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB] 280s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 280s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 280s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 280s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 280s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 281s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 281s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 281s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 281s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 281s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 281s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 282s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 282s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 282s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 282s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 282s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 306s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 vt arm64 0.57721+ds-3build2 [557 kB] 306s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 vt-examples all 0.57721+ds-3build2 [18.4 MB] 323s Preconfiguring packages ... 323s Fetched 57.8 MB in 50s (1155 kB/s) 323s Selecting previously unselected package fonts-dejavu-mono. 323s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 323s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 323s Unpacking fonts-dejavu-mono (2.37-8) ... 323s Selecting previously unselected package fonts-dejavu-core. 323s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 323s Unpacking fonts-dejavu-core (2.37-8) ... 323s Selecting previously unselected package fontconfig-config. 323s Preparing to unpack .../02-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ... 324s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 324s Selecting previously unselected package libfontconfig1:arm64. 324s Preparing to unpack .../03-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ... 324s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 324s Selecting previously unselected package fontconfig. 324s Preparing to unpack .../04-fontconfig_2.15.0-2ubuntu1_arm64.deb ... 324s Unpacking fontconfig (2.15.0-2ubuntu1) ... 324s Selecting previously unselected package libblas3:arm64. 324s Preparing to unpack .../05-libblas3_3.12.1-2_arm64.deb ... 324s Unpacking libblas3:arm64 (3.12.1-2) ... 324s Selecting previously unselected package libpixman-1-0:arm64. 324s Preparing to unpack .../06-libpixman-1-0_0.44.0-3_arm64.deb ... 324s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 324s Selecting previously unselected package libxcb-render0:arm64. 324s Preparing to unpack .../07-libxcb-render0_1.17.0-2_arm64.deb ... 324s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 324s Selecting previously unselected package libxcb-shm0:arm64. 324s Preparing to unpack .../08-libxcb-shm0_1.17.0-2_arm64.deb ... 324s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 324s Selecting previously unselected package libxrender1:arm64. 324s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 324s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 324s Selecting previously unselected package libcairo2:arm64. 324s Preparing to unpack .../10-libcairo2_1.18.2-2_arm64.deb ... 324s Unpacking libcairo2:arm64 (1.18.2-2) ... 324s Selecting previously unselected package libdatrie1:arm64. 324s Preparing to unpack .../11-libdatrie1_0.2.13-3build1_arm64.deb ... 324s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 324s Selecting previously unselected package libdeflate0:arm64. 324s Preparing to unpack .../12-libdeflate0_1.23-1_arm64.deb ... 324s Unpacking libdeflate0:arm64 (1.23-1) ... 324s Selecting previously unselected package libgfortran5:arm64. 324s Preparing to unpack .../13-libgfortran5_15-20250222-0ubuntu1_arm64.deb ... 324s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ... 324s Selecting previously unselected package libgomp1:arm64. 324s Preparing to unpack .../14-libgomp1_15-20250222-0ubuntu1_arm64.deb ... 324s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ... 324s Selecting previously unselected package libgraphite2-3:arm64. 324s Preparing to unpack .../15-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 324s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 324s Selecting previously unselected package libharfbuzz0b:arm64. 324s Preparing to unpack .../16-libharfbuzz0b_10.2.0-1_arm64.deb ... 324s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 324s Selecting previously unselected package libhtscodecs2:arm64. 324s Preparing to unpack .../17-libhtscodecs2_1.6.1-2_arm64.deb ... 324s Unpacking libhtscodecs2:arm64 (1.6.1-2) ... 324s Selecting previously unselected package libhts3t64:arm64. 324s Preparing to unpack .../18-libhts3t64_1.21+ds-1_arm64.deb ... 324s Unpacking libhts3t64:arm64 (1.21+ds-1) ... 324s Selecting previously unselected package x11-common. 324s Preparing to unpack .../19-x11-common_1%3a7.7+23ubuntu3_all.deb ... 324s Unpacking x11-common (1:7.7+23ubuntu3) ... 324s Selecting previously unselected package libice6:arm64. 324s Preparing to unpack .../20-libice6_2%3a1.1.1-1_arm64.deb ... 324s Unpacking libice6:arm64 (2:1.1.1-1) ... 324s Selecting previously unselected package libjpeg-turbo8:arm64. 324s Preparing to unpack .../21-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 324s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 324s Selecting previously unselected package libjpeg8:arm64. 324s Preparing to unpack .../22-libjpeg8_8c-2ubuntu11_arm64.deb ... 324s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 324s Selecting previously unselected package liblapack3:arm64. 324s Preparing to unpack .../23-liblapack3_3.12.1-2_arm64.deb ... 324s Unpacking liblapack3:arm64 (3.12.1-2) ... 324s Selecting previously unselected package liblerc4:arm64. 324s Preparing to unpack .../24-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 324s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 324s Selecting previously unselected package libthai-data. 324s Preparing to unpack .../25-libthai-data_0.1.29-2build1_all.deb ... 324s Unpacking libthai-data (0.1.29-2build1) ... 324s Selecting previously unselected package libthai0:arm64. 324s Preparing to unpack .../26-libthai0_0.1.29-2build1_arm64.deb ... 324s Unpacking libthai0:arm64 (0.1.29-2build1) ... 325s Selecting previously unselected package libpango-1.0-0:arm64. 325s Preparing to unpack .../27-libpango-1.0-0_1.56.2-1_arm64.deb ... 325s Unpacking libpango-1.0-0:arm64 (1.56.2-1) ... 325s Selecting previously unselected package libpangoft2-1.0-0:arm64. 325s Preparing to unpack .../28-libpangoft2-1.0-0_1.56.2-1_arm64.deb ... 325s Unpacking libpangoft2-1.0-0:arm64 (1.56.2-1) ... 325s Selecting previously unselected package libpangocairo-1.0-0:arm64. 325s Preparing to unpack .../29-libpangocairo-1.0-0_1.56.2-1_arm64.deb ... 325s Unpacking libpangocairo-1.0-0:arm64 (1.56.2-1) ... 325s Selecting previously unselected package libpaper2:arm64. 325s Preparing to unpack .../30-libpaper2_2.2.5-0.3_arm64.deb ... 325s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 325s Selecting previously unselected package libpaper-utils. 325s Preparing to unpack .../31-libpaper-utils_2.2.5-0.3_arm64.deb ... 325s Unpacking libpaper-utils (2.2.5-0.3) ... 325s Selecting previously unselected package libsharpyuv0:arm64. 325s Preparing to unpack .../32-libsharpyuv0_1.5.0-0.1_arm64.deb ... 325s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 325s Selecting previously unselected package libsm6:arm64. 325s Preparing to unpack .../33-libsm6_2%3a1.2.4-1_arm64.deb ... 325s Unpacking libsm6:arm64 (2:1.2.4-1) ... 325s Selecting previously unselected package libtcl8.6:arm64. 325s Preparing to unpack .../34-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 325s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 325s Selecting previously unselected package libjbig0:arm64. 325s Preparing to unpack .../35-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 325s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 325s Selecting previously unselected package libwebp7:arm64. 325s Preparing to unpack .../36-libwebp7_1.5.0-0.1_arm64.deb ... 325s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 325s Selecting previously unselected package libtiff6:arm64. 325s Preparing to unpack .../37-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 325s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 325s Selecting previously unselected package libxft2:arm64. 325s Preparing to unpack .../38-libxft2_2.3.6-1build1_arm64.deb ... 325s Unpacking libxft2:arm64 (2.3.6-1build1) ... 325s Selecting previously unselected package libxss1:arm64. 325s Preparing to unpack .../39-libxss1_1%3a1.2.3-1build3_arm64.deb ... 325s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 325s Selecting previously unselected package libtk8.6:arm64. 325s Preparing to unpack .../40-libtk8.6_8.6.16-1_arm64.deb ... 325s Unpacking libtk8.6:arm64 (8.6.16-1) ... 325s Selecting previously unselected package libxt6t64:arm64. 325s Preparing to unpack .../41-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 325s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 325s Selecting previously unselected package zip. 325s Preparing to unpack .../42-zip_3.0-14ubuntu2_arm64.deb ... 325s Unpacking zip (3.0-14ubuntu2) ... 325s Selecting previously unselected package unzip. 325s Preparing to unpack .../43-unzip_6.0-28ubuntu6_arm64.deb ... 325s Unpacking unzip (6.0-28ubuntu6) ... 325s Selecting previously unselected package xdg-utils. 325s Preparing to unpack .../44-xdg-utils_1.2.1-2ubuntu1_all.deb ... 325s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 325s Selecting previously unselected package r-base-core. 325s Preparing to unpack .../45-r-base-core_4.4.3-1_arm64.deb ... 325s Unpacking r-base-core (4.4.3-1) ... 326s Selecting previously unselected package vt. 326s Preparing to unpack .../46-vt_0.57721+ds-3build2_arm64.deb ... 326s Unpacking vt (0.57721+ds-3build2) ... 326s Selecting previously unselected package vt-examples. 326s Preparing to unpack .../47-vt-examples_0.57721+ds-3build2_all.deb ... 326s Unpacking vt-examples (0.57721+ds-3build2) ... 326s Setting up libhtscodecs2:arm64 (1.6.1-2) ... 326s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 326s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 326s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 326s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 326s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 326s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 326s Setting up libxcb-render0:arm64 (1.17.0-2) ... 326s Setting up unzip (6.0-28ubuntu6) ... 326s Setting up x11-common (1:7.7+23ubuntu3) ... 326s Setting up libdeflate0:arm64 (1.23-1) ... 326s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 326s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ... 326s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 326s Setting up zip (3.0-14ubuntu2) ... 326s Setting up libblas3:arm64 (3.12.1-2) ... 326s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 326s Setting up fonts-dejavu-mono (2.37-8) ... 326s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ... 326s Setting up fonts-dejavu-core (2.37-8) ... 326s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 326s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ... 326s Setting up libwebp7:arm64 (1.5.0-0.1) ... 326s Setting up libhts3t64:arm64 (1.21+ds-1) ... 326s Setting up libharfbuzz0b:arm64 (10.2.0-1) ... 326s Setting up libthai-data (0.1.29-2build1) ... 326s Setting up vt-examples (0.57721+ds-3build2) ... 326s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 326s Setting up libpaper2:arm64 (2.2.5-0.3) ... 326s Setting up xdg-utils (1.2.1-2ubuntu1) ... 326s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 326s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 326s Setting up libice6:arm64 (2:1.1.1-1) ... 326s Setting up liblapack3:arm64 (3.12.1-2) ... 326s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 326s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 326s Setting up libpaper-utils (2.2.5-0.3) ... 326s Setting up libthai0:arm64 (0.1.29-2build1) ... 326s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 326s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 326s Setting up libsm6:arm64 (2:1.2.4-1) ... 326s Setting up fontconfig (2.15.0-2ubuntu1) ... 329s Regenerating fonts cache... done. 329s Setting up libxft2:arm64 (2.3.6-1build1) ... 329s Setting up libtk8.6:arm64 (8.6.16-1) ... 329s Setting up libpango-1.0-0:arm64 (1.56.2-1) ... 329s Setting up libcairo2:arm64 (1.18.2-2) ... 329s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 329s Setting up libpangoft2-1.0-0:arm64 (1.56.2-1) ... 329s Setting up libpangocairo-1.0-0:arm64 (1.56.2-1) ... 329s Setting up r-base-core (4.4.3-1) ... 329s Creating config file /etc/R/Renviron with new version 329s Setting up vt (0.57721+ds-3build2) ... 329s Processing triggers for man-db (2.13.0-1) ... 330s Processing triggers for install-info (7.1.1-1) ... 330s Processing triggers for libc-bin (2.41-1ubuntu2) ... 332s autopkgtest [17:29:37]: test basic: [----------------------- 332s Help page on http://statgen.sph.umich.edu/wiki/Vt 332s autopkgtest [17:29:37]: test basic: -----------------------] 333s autopkgtest [17:29:38]: test basic: - - - - - - - - - - results - - - - - - - - - - 333s basic PASS 333s autopkgtest [17:29:38]: test run-unit-test: preparing testbed 333s Reading package lists... 334s Building dependency tree... 334s Reading state information... 334s Starting pkgProblemResolver with broken count: 0 334s Starting 2 pkgProblemResolver with broken count: 0 334s Done 335s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 336s autopkgtest [17:29:41]: test run-unit-test: [----------------------- 336s ++++++++++++++++++++++ 336s Tests for vt normalize 336s ++++++++++++++++++++++ 336s testing normalize 336s output VCF file : ok 336s output logs : ok 336s +++++++++++++++++++++++++++++++ 336s Tests for vt decompose_blocksub 336s +++++++++++++++++++++++++++++++ 336s testing decompose_blocksub of even-length blocks 337s output VCF file : ok 337s output logs : ok 337s testing decompose_blocksub with alignment 337s output VCF file : ok 337s output logs : ok 337s testing decompose_blocksub of phased even-length blocks 337s output VCF file : ok 337s output logs : ok 337s ++++++++++++++++++++++ 337s Tests for vt decompose 337s ++++++++++++++++++++++ 337s testing decompose for a triallelic variant 337s output VCF file : ok 337s output logs : ok 337s 337s Passed tests : 5 / 5 337s autopkgtest [17:29:42]: test run-unit-test: -----------------------] 337s autopkgtest [17:29:42]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 337s run-unit-test PASS 338s autopkgtest [17:29:43]: @@@@@@@@@@@@@@@@@@@@ summary 338s basic PASS 338s run-unit-test PASS 357s nova [W] Using flock in prodstack6-arm64 357s Creating nova instance adt-plucky-arm64-vt-20250315-172405-juju-7f2275-prod-proposed-migration-environment-2-951d8946-9bcb-416b-8af9-0d0c9f99af1d from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 357s nova [W] Timed out waiting for 00a3e17d-07fb-4723-9f83-50954571ff66 to get deleted.