0s autopkgtest [10:34:37]: starting date and time: 2025-03-15 10:34:37+0000 0s autopkgtest [10:34:37]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [10:34:37]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.m7etiekc/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade twopaco --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-4.secgroup --name adt-plucky-arm64-twopaco-20250315-103437-juju-7f2275-prod-proposed-migration-environment-20-4a43319a-5482-481b-bccb-fce9493da3e7 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 129s autopkgtest [10:36:46]: testbed dpkg architecture: arm64 129s autopkgtest [10:36:46]: testbed apt version: 2.9.33 130s autopkgtest [10:36:47]: @@@@@@@@@@@@@@@@@@@@ test bed setup 130s autopkgtest [10:36:47]: testbed release detected to be: None 131s autopkgtest [10:36:48]: updating testbed package index (apt update) 131s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 131s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 131s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 131s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 131s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [410 kB] 132s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 132s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [46.2 kB] 132s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [78.2 kB] 132s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1888 B] 132s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 132s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [353 kB] 132s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [15.7 kB] 132s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 132s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [572 B] 133s Fetched 1052 kB in 2s (617 kB/s) 134s Reading package lists... 134s Reading package lists... 135s Building dependency tree... 135s Reading state information... 135s Calculating upgrade... 135s Calculating upgrade... 136s The following packages will be upgraded: 136s python3-jinja2 strace 136s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 136s Need to get 608 kB of archives. 136s After this operation, 11.3 kB of additional disk space will be used. 136s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 137s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 137s Fetched 608 kB in 1s (618 kB/s) 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 138s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 138s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 138s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 138s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 138s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 138s Setting up strace (6.13+ds-1ubuntu1) ... 138s Processing triggers for man-db (2.13.0-1) ... 139s Reading package lists... 139s Building dependency tree... 139s Reading state information... 139s Solving dependencies... 140s The following packages will be REMOVED: 140s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 140s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 140s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 140s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 140s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 140s After this operation, 267 MB disk space will be freed. 140s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 140s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 140s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 140s Removing libpython3.12t64:arm64 (3.12.9-1) ... 140s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 141s Removing libnsl2:arm64 (1.3.0-3build3) ... 141s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 141s Removing libunwind8:arm64 (1.6.2-3.1) ... 141s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 141s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 143s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 143s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 143s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 143s /etc/kernel/postrm.d/initramfs-tools: 143s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 143s /etc/kernel/postrm.d/zz-flash-kernel: 143s flash-kernel: Kernel 6.11.0-8-generic has been removed. 143s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 143s /etc/kernel/postrm.d/zz-update-grub: 143s Sourcing file `/etc/default/grub' 143s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 143s Generating grub configuration file ... 143s Found linux image: /boot/vmlinuz-6.14.0-10-generic 143s Found initrd image: /boot/initrd.img-6.14.0-10-generic 144s Warning: os-prober will not be executed to detect other bootable partitions. 144s Systems on them will not be added to the GRUB boot configuration. 144s Check GRUB_DISABLE_OS_PROBER documentation entry. 144s Adding boot menu entry for UEFI Firmware Settings ... 144s done 144s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 144s Processing triggers for libc-bin (2.41-1ubuntu1) ... 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 144s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 144s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 144s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 144s autopkgtest [10:37:01]: upgrading testbed (apt dist-upgrade and autopurge) 145s Reading package lists... 145s Building dependency tree... 145s Reading state information... 146s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 146s Starting 2 pkgProblemResolver with broken count: 0 146s Done 146s Entering ResolveByKeep 147s 147s Calculating upgrade... 147s The following packages will be upgraded: 147s libc-bin libc-dev-bin libc6 libc6-dev locales 147s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 147s Need to get 9530 kB of archives. 147s After this operation, 0 B of additional disk space will be used. 147s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 150s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 150s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 153s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 154s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 158s Preconfiguring packages ... 158s Fetched 9530 kB in 11s (886 kB/s) 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 159s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 159s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 159s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 159s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 159s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 159s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 159s Setting up libc6:arm64 (2.41-1ubuntu2) ... 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 159s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 159s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 159s Setting up libc-bin (2.41-1ubuntu2) ... 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 159s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 159s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 160s Setting up locales (2.41-1ubuntu2) ... 160s Generating locales (this might take a while)... 162s en_US.UTF-8... done 162s Generation complete. 162s Setting up libc-dev-bin (2.41-1ubuntu2) ... 162s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 162s Processing triggers for man-db (2.13.0-1) ... 163s Processing triggers for systemd (257.3-1ubuntu3) ... 164s Reading package lists... 165s Building dependency tree... 165s Reading state information... 165s Starting pkgProblemResolver with broken count: 0 165s Starting 2 pkgProblemResolver with broken count: 0 165s Done 165s Solving dependencies... 166s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 166s autopkgtest [10:37:23]: rebooting testbed after setup commands that affected boot 190s autopkgtest [10:37:47]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 192s autopkgtest [10:37:49]: @@@@@@@@@@@@@@@@@@@@ apt-source twopaco 195s Get:1 http://ftpmaster.internal/ubuntu plucky/universe twopaco 1.0.0+dfsg-1 (dsc) [2022 B] 195s Get:2 http://ftpmaster.internal/ubuntu plucky/universe twopaco 1.0.0+dfsg-1 (tar) [179 kB] 195s Get:3 http://ftpmaster.internal/ubuntu plucky/universe twopaco 1.0.0+dfsg-1 (diff) [5356 B] 195s gpgv: Signature made Thu Sep 29 05:53:28 2022 UTC 195s gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 195s gpgv: issuer "merkys@debian.org" 195s gpgv: Can't check signature: No public key 195s dpkg-source: warning: cannot verify inline signature for ./twopaco_1.0.0+dfsg-1.dsc: no acceptable signature found 195s autopkgtest [10:37:52]: testing package twopaco version 1.0.0+dfsg-1 195s autopkgtest [10:37:52]: build not needed 196s autopkgtest [10:37:53]: test run-unit-test: preparing testbed 196s Reading package lists... 196s Building dependency tree... 196s Reading state information... 196s Starting pkgProblemResolver with broken count: 0 196s Starting 2 pkgProblemResolver with broken count: 0 196s Done 197s The following NEW packages will be installed: 197s libhwloc15 libtbb12 libtbbbind-2-5 libtbbmalloc2 twopaco 197s 0 upgraded, 5 newly installed, 0 to remove and 0 not upgraded. 197s Need to get 651 kB of archives. 197s After this operation, 2320 kB of additional disk space will be used. 197s Get:1 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc15 arm64 2.12.0-1 [162 kB] 198s Get:2 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtbbbind-2-5 arm64 2022.0.0-2 [15.1 kB] 198s Get:3 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtbbmalloc2 arm64 2022.0.0-2 [38.9 kB] 198s Get:4 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtbb12 arm64 2022.0.0-2 [71.3 kB] 198s Get:5 http://ftpmaster.internal/ubuntu plucky/universe arm64 twopaco arm64 1.0.0+dfsg-1 [364 kB] 199s Fetched 651 kB in 1s (727 kB/s) 199s Selecting previously unselected package libhwloc15:arm64. 199s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 199s Preparing to unpack .../libhwloc15_2.12.0-1_arm64.deb ... 199s Unpacking libhwloc15:arm64 (2.12.0-1) ... 199s Selecting previously unselected package libtbbbind-2-5:arm64. 199s Preparing to unpack .../libtbbbind-2-5_2022.0.0-2_arm64.deb ... 199s Unpacking libtbbbind-2-5:arm64 (2022.0.0-2) ... 199s Selecting previously unselected package libtbbmalloc2:arm64. 199s Preparing to unpack .../libtbbmalloc2_2022.0.0-2_arm64.deb ... 199s Unpacking libtbbmalloc2:arm64 (2022.0.0-2) ... 199s Selecting previously unselected package libtbb12:arm64. 199s Preparing to unpack .../libtbb12_2022.0.0-2_arm64.deb ... 199s Unpacking libtbb12:arm64 (2022.0.0-2) ... 199s Selecting previously unselected package twopaco. 199s Preparing to unpack .../twopaco_1.0.0+dfsg-1_arm64.deb ... 199s Unpacking twopaco (1.0.0+dfsg-1) ... 199s Setting up libtbbmalloc2:arm64 (2022.0.0-2) ... 199s Setting up libhwloc15:arm64 (2.12.0-1) ... 199s Setting up libtbbbind-2-5:arm64 (2022.0.0-2) ... 199s Setting up libtbb12:arm64 (2022.0.0-2) ... 199s Setting up twopaco (1.0.0+dfsg-1) ... 199s Processing triggers for man-db (2.13.0-1) ... 200s Processing triggers for libc-bin (2.41-1ubuntu2) ... 201s autopkgtest [10:37:58]: test run-unit-test: [----------------------- 203s Test # 0 PASSED 205s Test # 1 PASSED 207s Test # 2 PASSED 209s Test # 3 PASSED 211s Test # 4 PASSED 213s Test # 5 PASSED 215s Test # 6 PASSED 217s Test # 7 PASSED 219s Test # 8 PASSED 221s Test # 9 PASSED 221s Threads = 1 221s Vertex length = 11 221s Hash functions = 5 221s Filter size = 1048576 221s Capacity = 1 221s Files: 221s example.fa 221s -------------------------------------------------------------------------------- 221s Round 0, 0:1048576 221s Pass Filling Filtering 221s 1 0 0 221s 2 0 0 221s True junctions count = 7 221s False junctions count = 0 221s Hash table size = 7 221s Candidate marks count = 16 221s -------------------------------------------------------------------------------- 221s Reallocating bifurcations time: 0 221s True marks count: 16 221s Edges construction time: 0 221s -------------------------------------------------------------------------------- 221s Distinct junctions = 7 221s 221s TwoPaCo::buildGraphMain:: allocated with scalable_malloc; freeing. 221s TwoPaCo::buildGraphMain:: Calling scalable_allocation_command(TBBMALLOC_CLEAN_ALL_BUFFERS, 0); 221s autopkgtest [10:38:18]: test run-unit-test: -----------------------] 222s autopkgtest [10:38:19]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 222s run-unit-test PASS 222s autopkgtest [10:38:19]: @@@@@@@@@@@@@@@@@@@@ summary 222s run-unit-test PASS 239s nova [W] Using flock in prodstack6-arm64 239s Creating nova instance adt-plucky-arm64-twopaco-20250315-103437-juju-7f2275-prod-proposed-migration-environment-20-4a43319a-5482-481b-bccb-fce9493da3e7 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 239s nova [W] Timed out waiting for c526990d-8486-414a-82de-20125b2e7059 to get deleted.