0s autopkgtest [16:44:29]: starting date and time: 2025-03-15 16:44:29+0000 0s autopkgtest [16:44:29]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [16:44:29]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.r45x30hu/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade sickle --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-41.secgroup --name adt-plucky-arm64-sickle-20250315-164428-juju-7f2275-prod-proposed-migration-environment-15-3e686aa8-6588-45c9-820a-9fc879a5506b --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 167s autopkgtest [16:47:16]: testbed dpkg architecture: arm64 168s autopkgtest [16:47:17]: testbed apt version: 2.9.33 168s autopkgtest [16:47:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup 168s autopkgtest [16:47:17]: testbed release detected to be: None 169s autopkgtest [16:47:18]: updating testbed package index (apt update) 170s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 170s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 170s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 170s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 170s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 170s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 170s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 171s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 171s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1856 B] 171s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 171s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [324 kB] 171s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [14.7 kB] 171s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 171s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [268 B] 172s Fetched 1078 kB in 2s (619 kB/s) 173s Reading package lists... 173s + lsb_release --codename --short 173s + RELEASE=plucky 173s + cat 173s + [ plucky != trusty ] 173s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 173s Reading package lists... 174s Building dependency tree... 174s Reading state information... 174s Calculating upgrade... 174s Calculating upgrade... 175s The following packages will be upgraded: 175s pinentry-curses python3-jinja2 strace 175s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 175s Need to get 647 kB of archives. 175s After this operation, 11.3 kB of additional disk space will be used. 175s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 176s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-2ubuntu3 [39.2 kB] 176s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 176s Fetched 647 kB in 1s (584 kB/s) 177s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 177s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 177s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 177s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_arm64.deb ... 177s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 177s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 177s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 177s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 177s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 177s Setting up strace (6.13+ds-1ubuntu1) ... 177s Processing triggers for man-db (2.13.0-1) ... 178s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 178s + /usr/lib/apt/apt-helper analyze-pattern ?true 178s + uname -r 178s + sed s/\./\\./g 178s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.* 178s + apt list ?obsolete 178s + tail -n+2 178s + cut -d/ -f1 178s + grep -v ^linux-.*6\.14\.0-10-generic.* 178s + obsolete_pkgs=linux-headers-6.11.0-8-generic 178s linux-headers-6.11.0-8 178s linux-image-6.11.0-8-generic 178s linux-modules-6.11.0-8-generic 178s linux-tools-6.11.0-8-generic 178s linux-tools-6.11.0-8 178s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 178s Reading package lists... 179s Building dependency tree... 179s Reading state information... 179s Solving dependencies... 179s The following packages will be REMOVED: 179s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 179s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 179s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 179s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 180s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 180s After this operation, 267 MB disk space will be freed. 180s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 180s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 180s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 180s Removing libpython3.12t64:arm64 (3.12.9-1) ... 180s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 180s Removing libnsl2:arm64 (1.3.0-3build3) ... 180s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 180s Removing libunwind8:arm64 (1.6.2-3.1) ... 180s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 181s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 182s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 182s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 182s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 182s /etc/kernel/postrm.d/initramfs-tools: 182s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 182s /etc/kernel/postrm.d/zz-flash-kernel: 182s flash-kernel: Kernel 6.11.0-8-generic has been removed. 182s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 183s /etc/kernel/postrm.d/zz-update-grub: 183s Sourcing file `/etc/default/grub' 183s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 183s Generating grub configuration file ... 183s Found linux image: /boot/vmlinuz-6.14.0-10-generic 183s Found initrd image: /boot/initrd.img-6.14.0-10-generic 183s Warning: os-prober will not be executed to detect other bootable partitions. 183s Systems on them will not be added to the GRUB boot configuration. 183s Check GRUB_DISABLE_OS_PROBER documentation entry. 183s Adding boot menu entry for UEFI Firmware Settings ... 183s done 183s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 184s Processing triggers for libc-bin (2.41-1ubuntu1) ... 184s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 184s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 184s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 184s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 184s + grep -q trusty /etc/lsb-release 184s + [ ! -d /usr/share/doc/unattended-upgrades ] 184s + [ ! -d /usr/share/doc/lxd ] 184s + [ ! -d /usr/share/doc/lxd-client ] 184s + [ ! -d /usr/share/doc/snapd ] 184s + type iptables 184s + cat 184s + chmod 755 /etc/rc.local 184s + . /etc/rc.local 184s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 184s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 184s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 184s + uname -m 184s + [ aarch64 = ppc64le ] 184s + [ -d /run/systemd/system ] 184s + systemd-detect-virt --quiet --vm 184s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 184s + cat 184s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 184s + echo COMPRESS=lz4 184s autopkgtest [16:47:33]: upgrading testbed (apt dist-upgrade and autopurge) 184s Reading package lists... 185s Building dependency tree... 185s Reading state information... 185s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 185s Starting 2 pkgProblemResolver with broken count: 0 185s Done 186s Entering ResolveByKeep 186s 186s Calculating upgrade... 187s The following packages will be upgraded: 187s libc-bin libc-dev-bin libc6 libc6-dev locales 187s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 187s Need to get 9530 kB of archives. 187s After this operation, 0 B of additional disk space will be used. 187s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 189s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 189s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 192s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 193s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 197s Preconfiguring packages ... 197s Fetched 9530 kB in 10s (926 kB/s) 198s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 198s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 198s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 198s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 198s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 198s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 198s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 198s Setting up libc6:arm64 (2.41-1ubuntu2) ... 198s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 198s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 198s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 198s Setting up libc-bin (2.41-1ubuntu2) ... 199s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 199s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 199s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 199s Setting up locales (2.41-1ubuntu2) ... 200s Generating locales (this might take a while)... 202s en_US.UTF-8... done 202s Generation complete. 202s Setting up libc-dev-bin (2.41-1ubuntu2) ... 202s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 202s Processing triggers for man-db (2.13.0-1) ... 203s Processing triggers for systemd (257.3-1ubuntu3) ... 204s Reading package lists... 204s Building dependency tree... 204s Reading state information... 204s Starting pkgProblemResolver with broken count: 0 205s Starting 2 pkgProblemResolver with broken count: 0 205s Done 205s Solving dependencies... 205s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 207s autopkgtest [16:47:56]: rebooting testbed after setup commands that affected boot 233s autopkgtest [16:48:22]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 235s autopkgtest [16:48:24]: @@@@@@@@@@@@@@@@@@@@ apt-source sickle 238s Get:1 http://ftpmaster.internal/ubuntu plucky/universe sickle 1.33+git20150314.f3d6ae3-2 (dsc) [2125 B] 238s Get:2 http://ftpmaster.internal/ubuntu plucky/universe sickle 1.33+git20150314.f3d6ae3-2 (tar) [290 kB] 238s Get:3 http://ftpmaster.internal/ubuntu plucky/universe sickle 1.33+git20150314.f3d6ae3-2 (diff) [3968 B] 238s gpgv: Signature made Sat Jun 27 15:43:08 2020 UTC 238s gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 238s gpgv: issuer "npatra974@gmail.com" 238s gpgv: Can't check signature: No public key 238s dpkg-source: warning: cannot verify inline signature for ./sickle_1.33+git20150314.f3d6ae3-2.dsc: no acceptable signature found 238s autopkgtest [16:48:27]: testing package sickle version 1.33+git20150314.f3d6ae3-2 239s autopkgtest [16:48:28]: build not needed 239s autopkgtest [16:48:28]: test run-unit-test: preparing testbed 239s Reading package lists... 240s Building dependency tree... 240s Reading state information... 240s Starting pkgProblemResolver with broken count: 0 240s Starting 2 pkgProblemResolver with broken count: 0 240s Done 241s The following NEW packages will be installed: 241s sickle 241s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 241s Need to get 17.5 kB of archives. 241s After this operation, 49.2 kB of additional disk space will be used. 241s Get:1 http://ftpmaster.internal/ubuntu plucky/universe arm64 sickle arm64 1.33+git20150314.f3d6ae3-2 [17.5 kB] 241s Fetched 17.5 kB in 0s (77.6 kB/s) 241s Selecting previously unselected package sickle. 242s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 242s Preparing to unpack .../sickle_1.33+git20150314.f3d6ae3-2_arm64.deb ... 242s Unpacking sickle (1.33+git20150314.f3d6ae3-2) ... 242s Setting up sickle (1.33+git20150314.f3d6ae3-2) ... 242s Processing triggers for man-db (2.13.0-1) ... 244s autopkgtest [16:48:33]: test run-unit-test: [----------------------- 244s Test 1 244s 244s SE input file: test.fastq 244s 244s Total FastQ records: 2500 244s FastQ records kept: 2483 244s FastQ records discarded: 17 244s 244s 244s SE input file: test.f.fastq 244s 244s Total FastQ records: 1250 244s FastQ records kept: 962 244s FastQ records discarded: 288 244s 244s 244s SE input file: test.r.fastq 244s 244s Total FastQ records: 1250 244s FastQ records kept: 1233 244s FastQ records discarded: 17 244s 244s 244s SE input file: test.fastq 244s 244s Total FastQ records: 2500 244s FastQ records kept: 2500 244s FastQ records discarded: 0 244s 244s PASS 244s 244s Test 2 244s Warning: PE file 2 is shorter than PE file 1. Disregarding rest of PE file 1. 244s 244s PE forward file: test.fastq 244s PE reverse file: test.r.fastq 244s 244s Total input FastQ records: 2500 (1250 pairs) 244s 244s FastQ paired records kept: 2500 (1250 pairs) 244s FastQ single records kept: 0 (from PE1: 0, from PE2: 0) 244s FastQ paired records discarded: 0 (0 pairs) 244s FastQ single records discarded: 0 (from PE1: 0, from PE2: 0) 244s 244s PASS 244s autopkgtest [16:48:33]: test run-unit-test: -----------------------] 245s run-unit-test PASS 245s autopkgtest [16:48:34]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 245s autopkgtest [16:48:34]: @@@@@@@@@@@@@@@@@@@@ summary 245s run-unit-test PASS 265s nova [W] Using flock in prodstack6-arm64 265s Creating nova instance adt-plucky-arm64-sickle-20250315-164428-juju-7f2275-prod-proposed-migration-environment-15-3e686aa8-6588-45c9-820a-9fc879a5506b from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 265s nova [W] Timed out waiting for 6841edfc-3b04-4244-ac66-35bb4498f033 to get deleted.