0s autopkgtest [16:41:09]: starting date and time: 2025-03-15 16:41:09+0000 0s autopkgtest [16:41:09]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [16:41:09]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.h6ut1wmk/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade seqan-needle --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-16.secgroup --name adt-plucky-arm64-seqan-needle-20250315-164109-juju-7f2275-prod-proposed-migration-environment-20-f3663310-fc1c-4bce-8982-859610868aae --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 138s autopkgtest [16:43:27]: testbed dpkg architecture: arm64 138s autopkgtest [16:43:27]: testbed apt version: 2.9.33 139s autopkgtest [16:43:28]: @@@@@@@@@@@@@@@@@@@@ test bed setup 139s autopkgtest [16:43:28]: testbed release detected to be: None 140s autopkgtest [16:43:29]: updating testbed package index (apt update) 140s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 140s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 140s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 140s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 140s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 140s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 141s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 141s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 141s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1856 B] 141s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 141s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [324 kB] 141s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [14.7 kB] 141s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 141s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [268 B] 142s Fetched 1078 kB in 2s (696 kB/s) 142s Reading package lists... 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 144s Calculating upgrade... 144s Calculating upgrade... 145s The following packages will be upgraded: 145s pinentry-curses python3-jinja2 strace 145s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 145s Need to get 647 kB of archives. 145s After this operation, 11.3 kB of additional disk space will be used. 145s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 145s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-2ubuntu3 [39.2 kB] 145s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 146s Fetched 647 kB in 1s (613 kB/s) 146s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 146s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 146s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 146s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_arm64.deb ... 146s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 146s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 147s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 147s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 147s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 147s Setting up strace (6.13+ds-1ubuntu1) ... 147s Processing triggers for man-db (2.13.0-1) ... 148s Reading package lists... 148s Building dependency tree... 148s Reading state information... 148s Solving dependencies... 149s The following packages will be REMOVED: 149s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 149s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 149s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 149s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 149s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 149s After this operation, 267 MB disk space will be freed. 149s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 149s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 149s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 149s Removing libpython3.12t64:arm64 (3.12.9-1) ... 149s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 149s Removing libnsl2:arm64 (1.3.0-3build3) ... 149s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 149s Removing libunwind8:arm64 (1.6.2-3.1) ... 149s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 150s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 151s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 151s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 151s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 151s /etc/kernel/postrm.d/initramfs-tools: 151s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 152s /etc/kernel/postrm.d/zz-flash-kernel: 152s flash-kernel: Kernel 6.11.0-8-generic has been removed. 152s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 152s /etc/kernel/postrm.d/zz-update-grub: 152s Sourcing file `/etc/default/grub' 152s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 152s Generating grub configuration file ... 152s Found linux image: /boot/vmlinuz-6.14.0-10-generic 152s Found initrd image: /boot/initrd.img-6.14.0-10-generic 152s Warning: os-prober will not be executed to detect other bootable partitions. 152s Systems on them will not be added to the GRUB boot configuration. 152s Check GRUB_DISABLE_OS_PROBER documentation entry. 152s Adding boot menu entry for UEFI Firmware Settings ... 152s done 153s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 153s Processing triggers for libc-bin (2.41-1ubuntu1) ... 153s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 153s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 153s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 153s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 153s autopkgtest [16:43:42]: upgrading testbed (apt dist-upgrade and autopurge) 153s Reading package lists... 154s Building dependency tree... 154s Reading state information... 154s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 154s Starting 2 pkgProblemResolver with broken count: 0 154s Done 155s Entering ResolveByKeep 155s 156s Calculating upgrade... 156s The following packages will be upgraded: 156s libc-bin libc-dev-bin libc6 libc6-dev locales 156s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 156s Need to get 9530 kB of archives. 156s After this operation, 0 B of additional disk space will be used. 156s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 158s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 158s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 161s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 162s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 166s Preconfiguring packages ... 166s Fetched 9530 kB in 10s (955 kB/s) 167s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 167s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 167s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 167s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 167s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 167s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 167s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 167s Setting up libc6:arm64 (2.41-1ubuntu2) ... 167s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 167s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 167s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 167s Setting up libc-bin (2.41-1ubuntu2) ... 167s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 167s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 167s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 168s Setting up locales (2.41-1ubuntu2) ... 168s Generating locales (this might take a while)... 170s en_US.UTF-8... done 170s Generation complete. 170s Setting up libc-dev-bin (2.41-1ubuntu2) ... 170s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 170s Processing triggers for man-db (2.13.0-1) ... 171s Processing triggers for systemd (257.3-1ubuntu3) ... 172s Reading package lists... 173s Building dependency tree... 173s Reading state information... 173s Starting pkgProblemResolver with broken count: 0 173s Starting 2 pkgProblemResolver with broken count: 0 173s Done 173s Solving dependencies... 174s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 174s autopkgtest [16:44:03]: rebooting testbed after setup commands that affected boot 197s autopkgtest [16:44:26]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 200s autopkgtest [16:44:29]: @@@@@@@@@@@@@@@@@@@@ apt-source seqan-needle 218s Get:1 http://ftpmaster.internal/ubuntu plucky/universe seqan-needle 1.0.3+ds-1 (dsc) [2319 B] 218s Get:2 http://ftpmaster.internal/ubuntu plucky/universe seqan-needle 1.0.3+ds-1 (tar) [14.7 MB] 218s Get:3 http://ftpmaster.internal/ubuntu plucky/universe seqan-needle 1.0.3+ds-1 (diff) [6296 B] 218s gpgv: Signature made Mon Nov 11 12:20:11 2024 UTC 218s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 218s gpgv: Can't check signature: No public key 218s dpkg-source: warning: cannot verify inline signature for ./seqan-needle_1.0.3+ds-1.dsc: no acceptable signature found 219s autopkgtest [16:44:48]: testing package seqan-needle version 1.0.3+ds-1 219s autopkgtest [16:44:48]: build not needed 222s autopkgtest [16:44:51]: test run-unit-tests: preparing testbed 223s Reading package lists... 223s Building dependency tree... 223s Reading state information... 224s Starting pkgProblemResolver with broken count: 0 224s Starting 2 pkgProblemResolver with broken count: 0 224s Done 225s The following NEW packages will be installed: 225s build-essential cmake cmake-data cpp cpp-14 cpp-14-aarch64-linux-gnu 225s cpp-aarch64-linux-gnu g++ g++-14 g++-14-aarch64-linux-gnu 225s g++-aarch64-linux-gnu gcc gcc-14 gcc-14-aarch64-linux-gnu 225s gcc-aarch64-linux-gnu git git-man googletest libasan8 libbz2-dev libcc1-0 225s libcereal-dev liberror-perl libgcc-14-dev libgomp1 libgtest-dev libhwasan0 225s libisl23 libitm1 libjsoncpp26 liblsan0 libmpc3 librhash1 libseqan3-dev 225s libstdc++-14-dev libtsan2 libubsan1 rapidjson-dev seqan-needle 225s seqan-needle-doc zlib1g-dev 225s 0 upgraded, 41 newly installed, 0 to remove and 0 not upgraded. 225s Need to get 82.6 MB of archives. 225s After this operation, 300 MB of additional disk space will be used. 225s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 226s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 226s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB] 238s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B] 238s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 238s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 238s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB] 238s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 238s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB] 238s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB] 240s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB] 242s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB] 245s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB] 246s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB] 248s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB] 251s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB] 274s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB] 275s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 275s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 275s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB] 278s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB] 291s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB] 292s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 292s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 292s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 292s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 cmake-data all 3.31.6-1ubuntu1 [2294 kB] 294s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libjsoncpp26 arm64 1.9.6-3 [78.7 kB] 294s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 librhash1 arm64 1.4.5-1 [128 kB] 295s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 cmake arm64 3.31.6-1ubuntu1 [11.4 MB] 307s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 liberror-perl all 0.17030-1 [23.5 kB] 307s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 git-man all 1:2.48.1-0ubuntu1 [1148 kB] 308s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 git arm64 1:2.48.1-0ubuntu1 [4219 kB] 313s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 googletest all 1.16.0-1 [526 kB] 313s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 313s Get:35 http://ftpmaster.internal/ubuntu plucky/universe arm64 rapidjson-dev all 1.1.0+dfsg2-7.3ubuntu1 [97.3 kB] 314s Get:36 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcereal-dev arm64 1.3.2+dfsg-5 [222 kB] 314s Get:37 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgtest-dev arm64 1.16.0-1 [272 kB] 314s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 315s Get:39 http://ftpmaster.internal/ubuntu plucky/universe arm64 libseqan3-dev all 3.4.0~rc.3+ds-3 [758 kB] 316s Get:40 http://ftpmaster.internal/ubuntu plucky/universe arm64 seqan-needle arm64 1.0.3+ds-1 [351 kB] 317s Get:41 http://ftpmaster.internal/ubuntu plucky/universe arm64 seqan-needle-doc all 1.0.3+ds-1 [119 kB] 317s Fetched 82.6 MB in 1min 32s (899 kB/s) 317s Selecting previously unselected package libisl23:arm64. 318s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 318s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ... 318s Unpacking libisl23:arm64 (0.27-1) ... 318s Selecting previously unselected package libmpc3:arm64. 318s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ... 318s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 318s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 318s Preparing to unpack .../02-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 318s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 318s Selecting previously unselected package cpp-14. 318s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_arm64.deb ... 318s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 318s Selecting previously unselected package cpp-aarch64-linux-gnu. 318s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 318s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 318s Selecting previously unselected package cpp. 318s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 318s Unpacking cpp (4:14.2.0-1ubuntu1) ... 318s Selecting previously unselected package libcc1-0:arm64. 318s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_arm64.deb ... 318s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ... 318s Selecting previously unselected package libgomp1:arm64. 318s Preparing to unpack .../07-libgomp1_15-20250222-0ubuntu1_arm64.deb ... 319s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ... 319s Selecting previously unselected package libitm1:arm64. 319s Preparing to unpack .../08-libitm1_15-20250222-0ubuntu1_arm64.deb ... 319s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ... 319s Selecting previously unselected package libasan8:arm64. 319s Preparing to unpack .../09-libasan8_15-20250222-0ubuntu1_arm64.deb ... 319s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ... 319s Selecting previously unselected package liblsan0:arm64. 319s Preparing to unpack .../10-liblsan0_15-20250222-0ubuntu1_arm64.deb ... 319s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ... 319s Selecting previously unselected package libtsan2:arm64. 319s Preparing to unpack .../11-libtsan2_15-20250222-0ubuntu1_arm64.deb ... 319s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ... 319s Selecting previously unselected package libubsan1:arm64. 319s Preparing to unpack .../12-libubsan1_15-20250222-0ubuntu1_arm64.deb ... 319s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ... 319s Selecting previously unselected package libhwasan0:arm64. 319s Preparing to unpack .../13-libhwasan0_15-20250222-0ubuntu1_arm64.deb ... 319s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ... 319s Selecting previously unselected package libgcc-14-dev:arm64. 319s Preparing to unpack .../14-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ... 319s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 319s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 319s Preparing to unpack .../15-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 319s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 320s Selecting previously unselected package gcc-14. 320s Preparing to unpack .../16-gcc-14_14.2.0-17ubuntu3_arm64.deb ... 320s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 320s Selecting previously unselected package gcc-aarch64-linux-gnu. 320s Preparing to unpack .../17-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 320s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 320s Selecting previously unselected package gcc. 320s Preparing to unpack .../18-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ... 320s Unpacking gcc (4:14.2.0-1ubuntu1) ... 320s Selecting previously unselected package libstdc++-14-dev:arm64. 320s Preparing to unpack .../19-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ... 320s Unpacking libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 320s Selecting previously unselected package g++-14-aarch64-linux-gnu. 320s Preparing to unpack .../20-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 320s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 321s Selecting previously unselected package g++-14. 321s Preparing to unpack .../21-g++-14_14.2.0-17ubuntu3_arm64.deb ... 321s Unpacking g++-14 (14.2.0-17ubuntu3) ... 321s Selecting previously unselected package g++-aarch64-linux-gnu. 321s Preparing to unpack .../22-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 321s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 321s Selecting previously unselected package g++. 321s Preparing to unpack .../23-g++_4%3a14.2.0-1ubuntu1_arm64.deb ... 321s Unpacking g++ (4:14.2.0-1ubuntu1) ... 321s Selecting previously unselected package build-essential. 321s Preparing to unpack .../24-build-essential_12.10ubuntu1_arm64.deb ... 321s Unpacking build-essential (12.10ubuntu1) ... 321s Selecting previously unselected package cmake-data. 321s Preparing to unpack .../25-cmake-data_3.31.6-1ubuntu1_all.deb ... 321s Unpacking cmake-data (3.31.6-1ubuntu1) ... 322s Selecting previously unselected package libjsoncpp26:arm64. 322s Preparing to unpack .../26-libjsoncpp26_1.9.6-3_arm64.deb ... 322s Unpacking libjsoncpp26:arm64 (1.9.6-3) ... 322s Selecting previously unselected package librhash1:arm64. 322s Preparing to unpack .../27-librhash1_1.4.5-1_arm64.deb ... 322s Unpacking librhash1:arm64 (1.4.5-1) ... 322s Selecting previously unselected package cmake. 322s Preparing to unpack .../28-cmake_3.31.6-1ubuntu1_arm64.deb ... 322s Unpacking cmake (3.31.6-1ubuntu1) ... 322s Selecting previously unselected package liberror-perl. 322s Preparing to unpack .../29-liberror-perl_0.17030-1_all.deb ... 322s Unpacking liberror-perl (0.17030-1) ... 322s Selecting previously unselected package git-man. 322s Preparing to unpack .../30-git-man_1%3a2.48.1-0ubuntu1_all.deb ... 322s Unpacking git-man (1:2.48.1-0ubuntu1) ... 322s Selecting previously unselected package git. 322s Preparing to unpack .../31-git_1%3a2.48.1-0ubuntu1_arm64.deb ... 322s Unpacking git (1:2.48.1-0ubuntu1) ... 323s Selecting previously unselected package googletest. 323s Preparing to unpack .../32-googletest_1.16.0-1_all.deb ... 323s Unpacking googletest (1.16.0-1) ... 323s Selecting previously unselected package libbz2-dev:arm64. 323s Preparing to unpack .../33-libbz2-dev_1.0.8-6_arm64.deb ... 323s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 323s Selecting previously unselected package rapidjson-dev. 323s Preparing to unpack .../34-rapidjson-dev_1.1.0+dfsg2-7.3ubuntu1_all.deb ... 323s Unpacking rapidjson-dev (1.1.0+dfsg2-7.3ubuntu1) ... 323s Selecting previously unselected package libcereal-dev. 323s Preparing to unpack .../35-libcereal-dev_1.3.2+dfsg-5_arm64.deb ... 323s Unpacking libcereal-dev (1.3.2+dfsg-5) ... 323s Selecting previously unselected package libgtest-dev:arm64. 323s Preparing to unpack .../36-libgtest-dev_1.16.0-1_arm64.deb ... 323s Unpacking libgtest-dev:arm64 (1.16.0-1) ... 323s Selecting previously unselected package zlib1g-dev:arm64. 323s Preparing to unpack .../37-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 323s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 323s Selecting previously unselected package libseqan3-dev. 323s Preparing to unpack .../38-libseqan3-dev_3.4.0~rc.3+ds-3_all.deb ... 323s Unpacking libseqan3-dev (3.4.0~rc.3+ds-3) ... 323s Selecting previously unselected package seqan-needle. 323s Preparing to unpack .../39-seqan-needle_1.0.3+ds-1_arm64.deb ... 323s Unpacking seqan-needle (1.0.3+ds-1) ... 323s Selecting previously unselected package seqan-needle-doc. 324s Preparing to unpack .../40-seqan-needle-doc_1.0.3+ds-1_all.deb ... 324s Unpacking seqan-needle-doc (1.0.3+ds-1) ... 324s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ... 324s Setting up googletest (1.16.0-1) ... 324s Setting up rapidjson-dev (1.1.0+dfsg2-7.3ubuntu1) ... 324s Setting up liberror-perl (0.17030-1) ... 324s Setting up libjsoncpp26:arm64 (1.9.6-3) ... 324s Setting up seqan-needle-doc (1.0.3+ds-1) ... 324s Setting up libmpc3:arm64 (1.3.1-1build2) ... 324s Setting up libubsan1:arm64 (15-20250222-0ubuntu1) ... 324s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 324s Setting up libhwasan0:arm64 (15-20250222-0ubuntu1) ... 324s Setting up libasan8:arm64 (15-20250222-0ubuntu1) ... 324s Setting up seqan-needle (1.0.3+ds-1) ... 324s Setting up git-man (1:2.48.1-0ubuntu1) ... 324s Setting up cmake-data (3.31.6-1ubuntu1) ... 324s Setting up librhash1:arm64 (1.4.5-1) ... 324s Setting up libtsan2:arm64 (15-20250222-0ubuntu1) ... 324s Setting up libisl23:arm64 (0.27-1) ... 324s Setting up libcc1-0:arm64 (15-20250222-0ubuntu1) ... 324s Setting up liblsan0:arm64 (15-20250222-0ubuntu1) ... 324s Setting up libitm1:arm64 (15-20250222-0ubuntu1) ... 324s Setting up libbz2-dev:arm64 (1.0.8-6) ... 324s Setting up libgtest-dev:arm64 (1.16.0-1) ... 324s Setting up libcereal-dev (1.3.2+dfsg-5) ... 324s Setting up git (1:2.48.1-0ubuntu1) ... 324s Setting up cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 324s Setting up cmake (3.31.6-1ubuntu1) ... 324s Setting up libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 324s Setting up libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 324s Setting up libseqan3-dev (3.4.0~rc.3+ds-3) ... 324s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 324s Setting up cpp-14 (14.2.0-17ubuntu3) ... 324s Setting up cpp (4:14.2.0-1ubuntu1) ... 324s Setting up gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 324s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 324s Setting up g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 324s Setting up gcc-14 (14.2.0-17ubuntu3) ... 324s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 324s Setting up g++-14 (14.2.0-17ubuntu3) ... 324s Setting up gcc (4:14.2.0-1ubuntu1) ... 324s Setting up g++ (4:14.2.0-1ubuntu1) ... 324s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 324s Setting up build-essential (12.10ubuntu1) ... 324s Processing triggers for man-db (2.13.0-1) ... 325s Processing triggers for libc-bin (2.41-1ubuntu2) ... 327s autopkgtest [16:46:36]: test run-unit-tests: [----------------------- 327s -- The CXX compiler identification is GNU 14.2.0 327s -- Detecting CXX compiler ABI info 328s -- Detecting CXX compiler ABI info - done 328s -- Check for working CXX compiler: /usr/bin/c++ - skipped 328s -- Detecting CXX compile features 328s -- Detecting CXX compile features - done 329s -- CPM: Adding package use_ccache@0 (d2a54ef555b6fc2d496a4c9506dbeb7cf899ce37 to /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/use_ccache/7aab611fa016d10516c0081eb38725f4e188f61d) 329s CMake Warning at /usr/share/cmake-3.31/Modules/FetchContent.cmake:2111 (message): 329s FETCHCONTENT_FULLY_DISCONNECTED is set to true, which requires the source 329s directory for dependency use_ccache to already be populated. This 329s generally means it must not be set to true the first time CMake is run in a 329s build directory. The following source directory should already be 329s populated, but it doesn't exist: 329s 329s /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/use_ccache/7aab611fa016d10516c0081eb38725f4e188f61d 329s 329s Policy CMP0170 controls enforcement of this requirement. 329s Call Stack (most recent call first): 329s /usr/share/cmake-3.31/Modules/FetchContent.cmake:2384 (__FetchContent_Populate) 329s vendor/cpm/CPM_0.40.2.cmake:1114 (FetchContent_MakeAvailable) 329s vendor/cpm/CPM_0.40.2.cmake:895 (cpm_fetch_package) 329s vendor/cpm/CPM_0.40.2.cmake:711 (CPMAddPackage) 329s vendor/cpm/CPM_0.40.2.cmake:920 (CPMAddPackage) 329s CMakeLists.txt:61 (CPMGetPackage) 329s 329s 330s -- CPM: Using local package seqan3@3.4.0-rc.3 330s -- Found Git: /usr/bin/git (found version "2.48.1") 330s CMake Deprecation Warning at vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/CMakeLists.txt:1 (cmake_minimum_required): 330s Compatibility with CMake < 3.10 will be removed from a future version of 330s CMake. 330s 330s Update the VERSION argument value. Or, use the ... syntax 330s to tell CMake that the project requires at least but has been updated 330s to work with policies introduced by or earlier. 330s 330s 330s -- CPM: Adding package robin-hood@0 (7697343363af4cc3f42cab17be49e6af9ab181e2 at /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789) 331s -- Found OpenMP_CXX: -fopenmp (found version "4.5") 331s -- Found OpenMP: TRUE (found version "4.5") found components: CXX 331s -- CPM: Using local package GTest@1.15.2 331s -- You can run `make tests` to build tests. 331s -- You can run `make test` to run tests. 331s -- You can run `make check` to build and run tests. 331s -- Configuring done (3.8s) 331s -- Generating done (0.1s) 331s CMake Warning: 331s Manually-specified variables were not used by the project: 331s 331s CMAKE_EXPORT_NO_PACKAGE_REGISTRY 331s CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY 331s SEQAN3_NO_LEMON 331s 331s 331s -- Build files have been written to: /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests 331s /usr/bin/cmake -P /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/CMakeFiles/VerifyGlobs.cmake 331s /usr/bin/cmake -S/tmp/autopkgtest.QRAH6O/build.FxP/src -B/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests --check-build-system CMakeFiles/Makefile.cmake 0 331s make -f CMakeFiles/Makefile2 check 331s make[1]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 331s /usr/bin/cmake -P /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/CMakeFiles/VerifyGlobs.cmake 331s /usr/bin/cmake -S/tmp/autopkgtest.QRAH6O/build.FxP/src -B/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests --check-build-system CMakeFiles/Makefile.cmake 0 331s /usr/bin/cmake -E cmake_progress_start /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/CMakeFiles 31 331s make -f CMakeFiles/Makefile2 test/CMakeFiles/check.dir/all 331s make[2]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 331s make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend 331s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 331s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/src /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/src /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/src/CMakeFiles/needle_lib.dir/DependInfo.cmake "--color=" 331s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 331s make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build 331s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 331s [ 3%] Building CXX object src/CMakeFiles/needle_lib.dir/estimate.cpp.o 331s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/estimate.cpp.o -MF CMakeFiles/needle_lib.dir/estimate.cpp.o.d -o CMakeFiles/needle_lib.dir/estimate.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/src/estimate.cpp 345s [ 6%] Building CXX object src/CMakeFiles/needle_lib.dir/ibf.cpp.o 345s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/ibf.cpp.o -MF CMakeFiles/needle_lib.dir/ibf.cpp.o.d -o CMakeFiles/needle_lib.dir/ibf.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/src/ibf.cpp 362s [ 9%] Linking CXX static library ../lib/libneedle_lib.a 362s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/src && /usr/bin/cmake -P CMakeFiles/needle_lib.dir/cmake_clean_target.cmake 362s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_lib.dir/link.txt --verbose=1 362s "/usr/bin/gcc-ar-14" qc ../lib/libneedle_lib.a CMakeFiles/needle_lib.dir/estimate.cpp.o CMakeFiles/needle_lib.dir/ibf.cpp.o 362s "/usr/bin/gcc-ranlib-14" ../lib/libneedle_lib.a 362s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 362s [ 9%] Built target needle_lib 362s make -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/depend 362s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 362s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/src /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/src /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/src/CMakeFiles/needle.dir/DependInfo.cmake "--color=" 362s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 362s make -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/build 362s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 362s [ 12%] Building CXX object src/CMakeFiles/needle.dir/main.cpp.o 362s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/src && /usr/bin/c++ -DNEEDLE_DATE=\"2024-11-07\" -DNEEDLE_VERSION=\"1.0.3\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT src/CMakeFiles/needle.dir/main.cpp.o -MF CMakeFiles/needle.dir/main.cpp.o.d -o CMakeFiles/needle.dir/main.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/src/main.cpp 381s [ 16%] Linking CXX executable ../bin/needle 381s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle.dir/link.txt --verbose=1 397s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/needle.dir/link.d CMakeFiles/needle.dir/main.cpp.o -o ../bin/needle ../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a 397s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 397s [ 16%] Built target needle 397s make -f test/cli/CMakeFiles/delete_options_test.dir/build.make test/cli/CMakeFiles/delete_options_test.dir/depend 397s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 397s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli/CMakeFiles/delete_options_test.dir/DependInfo.cmake "--color=" 397s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 397s make -f test/cli/CMakeFiles/delete_options_test.dir/build.make test/cli/CMakeFiles/delete_options_test.dir/build 397s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 397s [ 19%] Building CXX object test/cli/CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o 397s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/cli/CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -MF CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o.d -o CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli/delete_options_test.cpp 405s [ 22%] Linking CXX executable ../../delete_options_test 405s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/delete_options_test.dir/link.txt --verbose=1 412s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/delete_options_test.dir/link.d CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -o ../../delete_options_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 412s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 412s [ 22%] Built target delete_options_test 412s make -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/depend 412s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 412s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api/CMakeFiles/count_test.dir/DependInfo.cmake "--color=" 412s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 412s make -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/build 412s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 412s [ 25%] Building CXX object test/api/CMakeFiles/count_test.dir/count_test.cpp.o 412s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/api/CMakeFiles/count_test.dir/count_test.cpp.o -MF CMakeFiles/count_test.dir/count_test.cpp.o.d -o CMakeFiles/count_test.dir/count_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api/count_test.cpp 420s [ 29%] Linking CXX executable ../../count_test 420s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_test.dir/link.txt --verbose=1 426s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/count_test.dir/link.d CMakeFiles/count_test.dir/count_test.cpp.o -o ../../count_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 426s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 426s [ 29%] Built target count_test 426s make -f test/api/CMakeFiles/insert_delete_test.dir/build.make test/api/CMakeFiles/insert_delete_test.dir/depend 426s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 426s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api/CMakeFiles/insert_delete_test.dir/DependInfo.cmake "--color=" 426s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 426s make -f test/api/CMakeFiles/insert_delete_test.dir/build.make test/api/CMakeFiles/insert_delete_test.dir/build 426s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 426s [ 32%] Building CXX object test/api/CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o 426s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/api/CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -MF CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o.d -o CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api/insert_delete_test.cpp 436s [ 35%] Linking CXX executable ../../insert_delete_test 436s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/insert_delete_test.dir/link.txt --verbose=1 442s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/insert_delete_test.dir/link.d CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -o ../../insert_delete_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 442s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 442s [ 35%] Built target insert_delete_test 442s make -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/depend 442s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 442s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api/CMakeFiles/estimate_test.dir/DependInfo.cmake "--color=" 442s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 442s make -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/build 442s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 442s [ 38%] Building CXX object test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o 442s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o -MF CMakeFiles/estimate_test.dir/estimate_test.cpp.o.d -o CMakeFiles/estimate_test.dir/estimate_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api/estimate_test.cpp 451s [ 41%] Linking CXX executable ../../estimate_test 451s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_test.dir/link.txt --verbose=1 458s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/estimate_test.dir/link.d CMakeFiles/estimate_test.dir/estimate_test.cpp.o -o ../../estimate_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 458s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 458s [ 41%] Built target estimate_test 458s make -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/depend 458s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 458s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api/CMakeFiles/ibf_test.dir/DependInfo.cmake "--color=" 458s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 458s make -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/build 458s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 458s [ 45%] Building CXX object test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o 458s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o -MF CMakeFiles/ibf_test.dir/ibf_test.cpp.o.d -o CMakeFiles/ibf_test.dir/ibf_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api/ibf_test.cpp 468s [ 48%] Linking CXX executable ../../ibf_test 468s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_test.dir/link.txt --verbose=1 475s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/ibf_test.dir/link.d CMakeFiles/ibf_test.dir/ibf_test.cpp.o -o ../../ibf_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 475s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 475s [ 48%] Built target ibf_test 475s make -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/depend 475s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 475s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api/CMakeFiles/ibfmin_test.dir/DependInfo.cmake "--color=" 475s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 475s make -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/build 475s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 475s [ 51%] Building CXX object test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o 475s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -MF CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o.d -o CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api/ibfmin_test.cpp 485s [ 54%] Linking CXX executable ../../ibfmin_test 485s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibfmin_test.dir/link.txt --verbose=1 491s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/ibfmin_test.dir/link.d CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -o ../../ibfmin_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 491s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 491s [ 54%] Built target ibfmin_test 492s make -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/depend 492s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 492s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api/CMakeFiles/minimiser_test.dir/DependInfo.cmake "--color=" 492s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 492s make -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/build 492s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 492s [ 58%] Building CXX object test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o 492s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -MF CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o.d -o CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/api/minimiser_test.cpp 502s [ 61%] Linking CXX executable ../../minimiser_test 502s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_test.dir/link.txt --verbose=1 509s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/minimiser_test.dir/link.d CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -o ../../minimiser_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 509s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 509s [ 61%] Built target minimiser_test 509s make -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/depend 509s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 509s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli/CMakeFiles/needle_options_test.dir/DependInfo.cmake "--color=" 510s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 510s make -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/build 510s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 510s [ 64%] Building CXX object test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o 510s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -MF CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o.d -o CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli/needle_options_test.cpp 512s [ 67%] Linking CXX executable ../../needle_options_test 512s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_options_test.dir/link.txt --verbose=1 513s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/needle_options_test.dir/link.d CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -o ../../needle_options_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 513s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 513s [ 67%] Built target needle_options_test 513s make -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/depend 513s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 513s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli/CMakeFiles/ibf_options_test.dir/DependInfo.cmake "--color=" 513s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 513s make -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/build 513s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 513s [ 70%] Building CXX object test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o 513s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -MF CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o.d -o CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli/ibf_options_test.cpp 515s [ 74%] Linking CXX executable ../../ibf_options_test 515s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_options_test.dir/link.txt --verbose=1 517s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/ibf_options_test.dir/link.d CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -o ../../ibf_options_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 517s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 517s [ 74%] Built target ibf_options_test 517s make -f test/cli/CMakeFiles/insert_options_test.dir/build.make test/cli/CMakeFiles/insert_options_test.dir/depend 517s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 517s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli/CMakeFiles/insert_options_test.dir/DependInfo.cmake "--color=" 517s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 517s make -f test/cli/CMakeFiles/insert_options_test.dir/build.make test/cli/CMakeFiles/insert_options_test.dir/build 517s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 517s [ 77%] Building CXX object test/cli/CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o 517s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/cli/CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -MF CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o.d -o CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli/insert_options_test.cpp 525s [ 80%] Linking CXX executable ../../insert_options_test 525s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/insert_options_test.dir/link.txt --verbose=1 531s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/insert_options_test.dir/link.d CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -o ../../insert_options_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 531s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 531s [ 80%] Built target insert_options_test 531s make -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/depend 531s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 531s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli/CMakeFiles/minimiser_options_test.dir/DependInfo.cmake "--color=" 531s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 531s make -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/build 531s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 531s [ 83%] Building CXX object test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o 531s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -MF CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o.d -o CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli/minimiser_options_test.cpp 533s [ 87%] Linking CXX executable ../../minimiser_options_test 533s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_options_test.dir/link.txt --verbose=1 534s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/minimiser_options_test.dir/link.d CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -o ../../minimiser_options_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 534s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 534s [ 87%] Built target minimiser_options_test 534s make -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/depend 534s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 534s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli/CMakeFiles/estimate_options_test.dir/DependInfo.cmake "--color=" 534s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 534s make -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/build 534s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 534s [ 90%] Building CXX object test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o 534s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -MF CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o.d -o CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli/estimate_options_test.cpp 543s [ 93%] Linking CXX executable ../../estimate_options_test 543s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_options_test.dir/link.txt --verbose=1 550s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/estimate_options_test.dir/link.d CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -o ../../estimate_options_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 550s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 550s [ 93%] Built target estimate_options_test 550s make -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/depend 550s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 550s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli/CMakeFiles/count_options_test.dir/DependInfo.cmake "--color=" 550s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 550s make -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/build 550s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 550s [ 96%] Building CXX object test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o 550s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/usr/lib/debian-med/bin//\" -DDATADIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/data/\" -DOUTPUTDIR=\"/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/tmp/autopkgtest.QRAH6O/build.FxP/src/src/../include -isystem /usr/include/seqan3/vendor -isystem /tmp/autopkgtest.QRAH6O/build.FxP/src/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -std=gnu++23 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -fopenmp -MD -MT test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o -MF CMakeFiles/count_options_test.dir/count_options_test.cpp.o.d -o CMakeFiles/count_options_test.dir/count_options_test.cpp.o -c /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli/count_options_test.cpp 552s [100%] Linking CXX executable ../../count_options_test 552s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_options_test.dir/link.txt --verbose=1 553s /usr/bin/c++ -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/count_options_test.dir/link.d CMakeFiles/count_options_test.dir/count_options_test.cpp.o -o ../../count_options_test ../../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a 553s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 553s [100%] Built target count_options_test 553s make -f test/CMakeFiles/check.dir/build.make test/CMakeFiles/check.dir/depend 553s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 553s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.QRAH6O/build.FxP/src /tmp/autopkgtest.QRAH6O/build.FxP/src/test /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test/CMakeFiles/check.dir/DependInfo.cmake "--color=" 553s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 553s make -f test/CMakeFiles/check.dir/build.make test/CMakeFiles/check.dir/build 553s make[3]: Entering directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 553s cd /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test && /usr/bin/ctest --output-on-failure --no-tests=error 553s Test project /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test 553s Start 1: count_test 553s 1/13 Test #1: count_test ....................... Passed 0.01 sec 553s Start 2: insert_delete_test 553s 2/13 Test #2: insert_delete_test ............... Passed 0.02 sec 553s Start 3: estimate_test 658s 3/13 Test #3: estimate_test .................... Passed 105.70 sec 658s Start 4: ibf_test 670s 4/13 Test #4: ibf_test ......................... Passed 11.97 sec 670s Start 5: ibfmin_test 670s 5/13 Test #5: ibfmin_test ...................... Passed 0.02 sec 670s Start 6: minimiser_test 670s 6/13 Test #6: minimiser_test ................... Passed 0.02 sec 670s Start 7: needle_options_test 670s 7/13 Test #7: needle_options_test .............. Passed 0.02 sec 670s Start 8: ibf_options_test 678s 8/13 Test #8: ibf_options_test ................. Passed 7.24 sec 678s Start 9: insert_options_test 689s 9/13 Test #9: insert_options_test .............. Passed 10.78 sec 689s Start 10: minimiser_options_test 689s 10/13 Test #10: minimiser_options_test ........... Passed 0.04 sec 689s Start 11: estimate_options_test 725s 11/13 Test #11: estimate_options_test ............ Passed 36.05 sec 725s Start 12: count_options_test 725s 12/13 Test #12: count_options_test ............... Passed 0.05 sec 725s Start 13: delete_options_test 745s 13/13 Test #13: delete_options_test ..............***Failed 20.34 sec 745s Running main() from ./googletest/src/gtest_main.cc 745s [==========] Running 2 tests from 1 test suite. 745s [----------] Global test environment set-up. 745s [----------] 2 tests from delete_options_test 745s [ RUN ] delete_options_test.delete_no_options 745s [ OK ] delete_options_test.delete_no_options (4 ms) 745s [ RUN ] delete_options_test.with_argument 745s /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli/delete_options_test.cpp:37: Failure 745s Expected equality of these values: 745s result.exit_code 745s Which is: 34304 745s 0 745s Command: SEQAN3_NO_VERSION_CHECK=1 /usr/lib/debian-med/bin//needle delete -i Test_ 0 745s 745s [ FAILED ] delete_options_test.with_argument (20315 ms) 745s [----------] 2 tests from delete_options_test (20319 ms total) 745s 745s [----------] Global test environment tear-down 745s [==========] 2 tests from 1 test suite ran. (20319 ms total) 745s [ PASSED ] 1 test. 745s [ FAILED ] 1 test, listed below: 745s [ FAILED ] delete_options_test.with_argument 745s 745s 1 FAILED TEST 745s 745s 745s 92% tests passed, 1 tests failed out of 13 745s 745s Total Test time (real) = 192.29 sec 745s 745s The following tests FAILED: 745s 13 - delete_options_test (Failed) 745s Errors while running CTest 745s make[3]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 745s make[3]: *** [test/CMakeFiles/check.dir/build.make:73: test/CMakeFiles/check] Error 8 745s make[2]: *** [CMakeFiles/Makefile2:338: test/CMakeFiles/check.dir/all] Error 2 745s make[1]: *** [CMakeFiles/Makefile2:345: test/CMakeFiles/check.dir/rule] Error 2 745s make: *** [Makefile:222: check] Error 2 745s make[2]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 745s make[1]: Leaving directory '/tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests' 745s Test project /tmp/autopkgtest.QRAH6O/build.FxP/src/build-tests/test 745s Start 1: count_test 745s 1/13 Test #1: count_test ....................... Passed 0.02 sec 745s Start 2: insert_delete_test 745s 2/13 Test #2: insert_delete_test ............... Passed 0.04 sec 745s Start 3: estimate_test 852s 3/13 Test #3: estimate_test .................... Passed 106.99 sec 852s Start 4: ibf_test 864s 4/13 Test #4: ibf_test ......................... Passed 11.73 sec 864s Start 5: ibfmin_test 864s 5/13 Test #5: ibfmin_test ...................... Passed 0.03 sec 864s Start 6: minimiser_test 864s 6/13 Test #6: minimiser_test ................... Passed 0.03 sec 864s Start 7: needle_options_test 864s 7/13 Test #7: needle_options_test .............. Passed 0.02 sec 864s Start 8: ibf_options_test 871s 8/13 Test #8: ibf_options_test ................. Passed 7.09 sec 871s Start 9: insert_options_test 882s 9/13 Test #9: insert_options_test .............. Passed 10.90 sec 882s Start 10: minimiser_options_test 882s 10/13 Test #10: minimiser_options_test ........... Passed 0.04 sec 882s Start 11: estimate_options_test 917s 11/13 Test #11: estimate_options_test ............ Passed 35.45 sec 917s Start 12: count_options_test 917s 12/13 Test #12: count_options_test ............... Passed 0.06 sec 917s Start 13: delete_options_test 937s 13/13 Test #13: delete_options_test ..............***Failed 19.14 sec 937s Running main() from ./googletest/src/gtest_main.cc 937s [==========] Running 2 tests from 1 test suite. 937s [----------] Global test environment set-up. 937s [----------] 2 tests from delete_options_test 937s [ RUN ] delete_options_test.delete_no_options 937s [ OK ] delete_options_test.delete_no_options (4 ms) 937s [ RUN ] delete_options_test.with_argument 937s /tmp/autopkgtest.QRAH6O/build.FxP/src/test/cli/delete_options_test.cpp:37: Failure 937s Expected equality of these values: 937s result.exit_code 937s Which is: 34304 937s 0 937s Command: SEQAN3_NO_VERSION_CHECK=1 /usr/lib/debian-med/bin//needle delete -i Test_ 0 937s 937s [ FAILED ] delete_options_test.with_argument (19132 ms) 937s [----------] 2 tests from delete_options_test (19137 ms total) 937s 937s [----------] Global test environment tear-down 937s [==========] 2 tests from 1 test suite ran. (19137 ms total) 937s [ PASSED ] 1 test. 937s [ FAILED ] 1 test, listed below: 937s [ FAILED ] delete_options_test.with_argument 937s 937s 1 FAILED TEST 937s 937s 937s 92% tests passed, 1 tests failed out of 13 937s 937s Total Test time (real) = 191.55 sec 937s 937s The following tests FAILED: 937s 13 - delete_options_test (Failed) 937s Errors while running CTest 937s autopkgtest [16:56:46]: test run-unit-tests: -----------------------] 938s run-unit-tests PASS 938s autopkgtest [16:56:47]: test run-unit-tests: - - - - - - - - - - results - - - - - - - - - - 938s autopkgtest [16:56:47]: @@@@@@@@@@@@@@@@@@@@ summary 938s run-unit-tests PASS 956s nova [W] Using flock in prodstack6-arm64 956s Creating nova instance adt-plucky-arm64-seqan-needle-20250315-164109-juju-7f2275-prod-proposed-migration-environment-20-f3663310-fc1c-4bce-8982-859610868aae from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 956s nova [W] Timed out waiting for 1792c540-7162-4e4c-a953-65d9374328f4 to get deleted.