0s autopkgtest [19:01:10]: starting date and time: 2025-02-03 19:01:10+0000 0s autopkgtest [19:01:10]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [19:01:10]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ca7zc7qv/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-testthat --apt-upgrade r-cran-stars --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-3.secgroup --name adt-plucky-arm64-r-cran-stars-20250203-190109-juju-7f2275-prod-proposed-migration-environment-15-84df6cbf-ef36-45b2-8bc4-657accaf4485 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 384s autopkgtest [19:07:34]: testbed dpkg architecture: arm64 385s autopkgtest [19:07:35]: testbed apt version: 2.9.18 385s autopkgtest [19:07:35]: @@@@@@@@@@@@@@@@@@@@ test bed setup 385s autopkgtest [19:07:35]: testbed release detected to be: None 386s autopkgtest [19:07:36]: updating testbed package index (apt update) 387s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 388s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 388s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 388s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 388s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.4 kB] 388s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [884 kB] 394s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 394s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 395s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [829 kB] 398s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4536 B] 398s Fetched 2031 kB in 12s (176 kB/s) 399s Reading package lists... 400s + lsb_release --codename --short 400s + RELEASE=plucky 400s + cat 400s + [ plucky != trusty ] 400s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 400s Reading package lists... 401s Building dependency tree... 401s Reading state information... 401s Calculating upgrade... 402s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 402s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 402s + /usr/lib/apt/apt-helper analyze-pattern ?true 402s + + sed s/\./\\./g 402s uname -r 402s + running_kernel_pattern=^linux-.*6\.12\.0-12-generic.* 402s + apt list ?obsolete 402s + tail -n+2 402s + cut -d/ -f1 402s + grep -v ^linux-.*6\.12\.0-12-generic.* 402s + true 402s + obsolete_pkgs= 402s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove 402s Reading package lists... 402s Building dependency tree... 402s Reading state information... 403s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 403s + grep -q trusty /etc/lsb-release 403s + [ ! -d /usr/share/doc/unattended-upgrades ] 403s + [ ! -d /usr/share/doc/lxd ] 403s + [ ! -d /usr/share/doc/lxd-client ] 403s + [ ! -d /usr/share/doc/snapd ] 403s + type iptables 403s + cat 403s + chmod 755 /etc/rc.local 403s + . /etc/rc.local 403s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 403s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 403s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 403s + uname -m 403s + [ aarch64 = ppc64le ] 403s + [ -d /run/systemd/system ] 403s + systemd-detect-virt --quiet --vm 403s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 403s + cat 403s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 403s + echo COMPRESS=lz4 403s autopkgtest [19:07:53]: upgrading testbed (apt dist-upgrade and autopurge) 403s Reading package lists... 404s Building dependency tree... 404s Reading state information... 404s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 404s Starting 2 pkgProblemResolver with broken count: 0 404s Done 405s Entering ResolveByKeep 405s 406s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 406s Reading package lists... 407s Building dependency tree... 407s Reading state information... 407s Starting pkgProblemResolver with broken count: 0 407s Starting 2 pkgProblemResolver with broken count: 0 407s Done 408s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 412s autopkgtest [19:08:02]: testbed running kernel: Linux 6.12.0-12-generic #12-Ubuntu SMP PREEMPT_DYNAMIC Thu Jan 23 07:24:57 UTC 2025 412s autopkgtest [19:08:02]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-stars 417s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-stars 0.6-7-1 (dsc) [2749 B] 417s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-stars 0.6-7-1 (tar) [4034 kB] 417s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-stars 0.6-7-1 (diff) [4392 B] 418s gpgv: Signature made Thu Jan 23 02:23:45 2025 UTC 418s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 418s gpgv: issuer "plessy@debian.org" 418s gpgv: Can't check signature: No public key 418s dpkg-source: warning: cannot verify inline signature for ./r-cran-stars_0.6-7-1.dsc: no acceptable signature found 418s autopkgtest [19:08:08]: testing package r-cran-stars version 0.6-7-1 419s autopkgtest [19:08:09]: build not needed 427s autopkgtest [19:08:17]: test run-unit-test: preparing testbed 427s Reading package lists... 427s Building dependency tree... 427s Reading state information... 428s Starting pkgProblemResolver with broken count: 0 428s Starting 2 pkgProblemResolver with broken count: 0 428s Done 429s The following NEW packages will be installed: 429s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 429s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data 429s gdal-plugins javascript-common libabsl20230802 libaec0 libaom3 429s libarmadillo14 libarpack2t64 libavif16 libblas3 libblosc1 libcairo2 429s libcfitsio10t64 libdatrie1 libdav1d7 libde265-0 libdeflate0 libfontconfig1 429s libfreexl1 libfyba0t64 libgav1-1 libgdal36 libgeos-c1t64 libgeos3.13.0 429s libgeotiff5 libgfortran5 libgif7 libgomp1 libgpgmepp6t64 libgraphite2-3 429s libharfbuzz0b libhdf4-0-alt libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec 429s libheif-plugin-libde265 libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8 429s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 429s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 429s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 429s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 429s libjs-twitter-bootstrap-datepicker libkmlbase1t64 libkmldom1t64 429s libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 liblua5.4-0 429s libminizip1t64 libmysqlclient24 libnetcdf19t64 libodbc2 libodbcinst2 429s libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 429s libpaper-utils libpaper2 libpixman-1-0 libpoppler145 libpq5 libproj25 429s libqhull-r8.0 librav1e0.7 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 429s libspatialite8t64 libsvtav1enc2 libsz2 libtcl8.6 libthai-data libthai0 429s libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7 429s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 429s libxt6t64 libyuv0 littler mysql-common node-bootstrap-sass node-html5shiv 429s node-normalize.css pandoc pandoc-data proj-data r-base-core r-cran-abind 429s r-cran-areal r-cran-askpass r-cran-base64enc r-cran-bdsmatrix r-cran-brio 429s r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-class 429s r-cran-classint r-cran-cli r-cran-clue r-cran-cluster r-cran-codetools 429s r-cran-collapse r-cran-colorspace r-cran-commonmark r-cran-covr r-cran-cpp11 429s r-cran-crayon r-cran-cubelyr r-cran-curl r-cran-dbi r-cran-deldir 429s r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-e1071 429s r-cran-evaluate r-cran-exactextractr r-cran-fansi r-cran-farver 429s r-cran-fastmap r-cran-fnn r-cran-fontawesome r-cran-formula r-cran-fs 429s r-cran-future r-cran-future.apply r-cran-generics r-cran-ggforce 429s r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest 429s r-cran-gridextra r-cran-gstat r-cran-gtable r-cran-highr r-cran-htmltools 429s r-cran-httpuv r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib 429s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later 429s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-listenv 429s r-cran-littler r-cran-lmtest r-cran-lwgeom r-cran-magrittr r-cran-mapdata 429s r-cran-maps r-cran-mass r-cran-matrix r-cran-maxlik r-cran-memoise 429s r-cran-mgcv r-cran-mime r-cran-misctools r-cran-munsell r-cran-ncdfgeom 429s r-cran-ncmeta r-cran-nlme r-cran-openssl r-cran-parallelly r-cran-pbapply 429s r-cran-pcict r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 429s r-cran-pkgload r-cran-plm r-cran-polyclip r-cran-praise r-cran-processx 429s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-r6 429s r-cran-randomforest r-cran-rappdirs r-cran-raster r-cran-rbibutils 429s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rdpack r-cran-rex 429s r-cran-rlang r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot 429s r-cran-s2 r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf r-cran-sftime 429s r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spatstat 429s r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom 429s r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random 429s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-stars r-cran-stringi 429s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 429s r-cran-terra r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect 429s r-cran-tinytex r-cran-tweenr r-cran-units r-cran-utf8 r-cran-vctrs 429s r-cran-viridis r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk 429s r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common 429s unzip x11-common xdg-utils zip 429s 0 upgraded, 292 newly installed, 0 to remove and 0 not upgraded. 429s Need to get 290 MB of archives. 429s After this operation, 782 MB of additional disk space will be used. 429s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 431s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 432s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 432s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 432s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 432s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 433s Get:7 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 433s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 442s Get:9 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-data all 3.10.1+dfsg-1build2 [269 kB] 443s Get:10 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-plugins arm64 3.10.1+dfsg-1build2 [25.6 kB] 443s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 11+nmu1 [5936 B] 443s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libabsl20230802 arm64 20230802.1-4ubuntu2 [487 kB] 446s Get:13 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 446s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libaom3 arm64 3.11.0-1 [1837 kB] 463s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB] 464s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-13ubuntu1 [437 kB] 467s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB] 486s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarpack2t64 arm64 3.9.1-4 [94.4 kB] 486s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarmadillo14 arm64 1:14.2.1+dfsg-1 [104 kB] 487s Get:20 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdav1d7 arm64 1.5.1-1 [304 kB] 490s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgav1-1 arm64 0.19.0-3 [572 kB] 498s Get:22 http://ftpmaster.internal/ubuntu plucky/universe arm64 librav1e0.7 arm64 0.7.1-9 [763 kB] 502s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsvtav1enc2 arm64 2.3.0+dfsg-1 [1832 kB] 520s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 521s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 521s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libyuv0 arm64 0.0.1899.20250103-1 [158 kB] 521s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 libavif16 arm64 1.1.1-1ubuntu1 [94.6 kB] 522s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 522s Get:29 http://ftpmaster.internal/ubuntu plucky/universe arm64 libblosc1 arm64 1.21.5+ds-1build1 [25.7 kB] 522s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 524s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 524s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 524s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 524s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 529s Get:35 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcfitsio10t64 arm64 4.5.0-5 [519 kB] 533s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 533s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libde265-0 arm64 1.0.15-1build4 [146 kB] 533s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 533s Get:39 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfyba0t64 arm64 4.1.1-11build1 [120 kB] 534s Get:40 http://ftpmaster.internal/ubuntu plucky/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [23.1 kB] 534s Get:41 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfreexl1 arm64 2.0.0-1build2 [41.9 kB] 534s Get:42 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos3.13.0 arm64 3.13.0-1 [918 kB] 539s Get:43 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos-c1t64 arm64 3.13.0-1 [92.6 kB] 540s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 proj-data all 9.5.1-1 [7924 kB] 586s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 586s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 587s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 587s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 588s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 589s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 libproj25 arm64 9.5.1-1 [1342 kB] 597s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeotiff5 arm64 1.7.3-1 [60.8 kB] 597s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 597s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 597s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf4-0-alt arm64 4.3.0-1 [271 kB] 599s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-310 arm64 1.14.5+repack-3 [1331 kB] 609s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-aomdec arm64 1.19.5-1build1 [11.4 kB] 609s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-libde265 arm64 1.19.5-1build1 [8902 B] 609s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif1 arm64 1.19.5-1build1 [369 kB] 613s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB] 613s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlbase1t64 arm64 1.3.0-12build1 [47.8 kB] 613s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmldom1t64 arm64 1.3.0-12build1 [146 kB] 614s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlengine1t64 arm64 1.3.0-12build1 [68.1 kB] 615s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 mysql-common all 5.8+1.1.1 [6800 B] 615s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libmysqlclient24 arm64 8.4.4-0ubuntu1 [1243 kB] 621s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [59.8 kB] 622s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnetcdf19t64 arm64 1:4.9.2-6ubuntu2 [471 kB] 627s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libltdl7 arm64 2.5.4-2.1 [42.9 kB] 628s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbc2 arm64 2.3.12-2ubuntu1 [147 kB] 629s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 unixodbc-common all 2.3.12-2ubuntu1 [9044 B] 629s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbcinst2 arm64 2.3.12-2ubuntu1 [30.3 kB] 629s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 libogdi4.1 arm64 4.1.1+ds-5 [217 kB] 630s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu3 [182 kB] 632s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libgpgmepp6t64 arm64 1.24.1-2ubuntu1 [119 kB] 634s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB] 635s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libpoppler145 arm64 25.01.0-2 [1139 kB] 643s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libpq5 arm64 17.2-1build2 [141 kB] 644s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB] 645s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 librttopo1 arm64 1.1.0-3build2 [187 kB] 645s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 libspatialite8t64 arm64 5.1.0-3build1 [1814 kB] 652s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3build1 [874 kB] 655s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgdal36 arm64 3.10.1+dfsg-1build2 [8895 kB] 730s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-13ubuntu1 [145 kB] 731s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 731s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 734s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 734s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 734s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 735s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 736s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 744s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 744s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 745s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 749s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 752s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 754s Get:95 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 754s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 754s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 754s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 757s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 757s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 758s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 758s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 759s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 759s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.1-1 [238 kB] 759s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.1-1 [49.6 kB] 759s Get:106 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.1-1 [27.6 kB] 759s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 760s Get:108 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 760s Get:109 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 760s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 761s Get:111 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 761s Get:112 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 761s Get:113 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 761s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-data all 2.2.28-7build1 [19.4 kB] 762s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-0 arm64 2.2.28-7build1 [52.8 kB] 762s Get:116 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 762s Get:117 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 762s Get:118 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 762s Get:119 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 762s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.2-1build1 [28.4 MB] 765s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 765s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 766s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 766s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 766s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 766s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 766s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 767s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 767s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB] 767s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 767s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 767s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB] 767s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 767s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 767s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 767s Get:136 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 768s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 768s Get:138 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 768s Get:139 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 768s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 768s Get:141 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 768s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 768s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 768s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 769s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 769s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-64-1 [1110 kB] 769s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB] 769s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 769s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-e1071 arm64 1.7-16-1 [563 kB] 769s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-kernsmooth arm64 2.23-26-1 [93.3 kB] 770s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-classint arm64 0.4-11+dfsg-1 [108 kB] 770s Get:152 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB] 770s Get:153 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 770s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 770s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-wk arm64 0.9.4-1 [1790 kB] 770s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-s2 arm64 1.1.7-1 [1987 kB] 770s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-units arm64 0.8-5+dfsg-1 [270 kB] 770s Get:158 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sf arm64 1.0-19+dfsg-1 [3247 kB] 770s Get:159 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-areal all 0.1.8+dfsg-2 [1004 kB] 770s Get:160 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 770s Get:161 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 771s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 771s Get:163 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bdsmatrix arm64 1.3-7-1 [300 kB] 771s Get:164 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 771s Get:165 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 771s Get:166 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 771s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 771s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 771s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 771s Get:170 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB] 771s Get:171 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 771s Get:172 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 771s Get:173 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 772s Get:174 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 772s Get:175 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 772s Get:176 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 772s Get:177 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cairo arm64 1.6-2-1 [89.0 kB] 772s Get:178 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.8.1-1 [395 kB] 772s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.5-1 [354 kB] 772s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 772s Get:181 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cluster arm64 2.1.8-1 [568 kB] 772s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-clue arm64 0.3-66-1 [967 kB] 772s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 773s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-collapse arm64 2.0.19-1 [3292 kB] 774s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 774s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB] 774s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 774s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rex all 1.2.1-1 [129 kB] 774s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-curl arm64 6.1.0+dfsg-1 [194 kB] 774s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-openssl arm64 2.2.0+dfsg-1 [404 kB] 774s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 774s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 774s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 774s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 774s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cpp11 all 0.5.1-1 [233 kB] 774s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cubelyr all 1.0.2-1 [347 kB] 774s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 774s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 774s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 774s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 774s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 774s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sp arm64 1:2.1-4+dfsg-1 [1472 kB] 775s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-terra arm64 1.8-10-1 [4052 kB] 775s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-raster arm64 3.6-31-1 [3149 kB] 775s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-exactextractr arm64 0.10.0-1build2 [568 kB] 775s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 775s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fnn arm64 1.1.4.1-1 [125 kB] 776s Get:208 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 776s Get:209 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formula all 1.2-5-1 [158 kB] 776s Get:210 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-globals all 0.16.3-1 [120 kB] 776s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 776s Get:212 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-parallelly arm64 1.41.0-1 [507 kB] 776s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 776s Get:214 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 776s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 776s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 776s Get:217 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.167-1 [2311 kB] 776s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-2-1 [4153 kB] 777s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 777s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 777s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 777s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 777s Get:223 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 777s Get:224 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 777s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 778s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tweenr arm64 2.0.3-1 [404 kB] 778s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-polyclip arm64 1.10-7-1 [113 kB] 778s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-systemfonts arm64 1.2.1-1 [302 kB] 778s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 778s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggforce arm64 0.4.2-1 [1778 kB] 778s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringi arm64 1.8.4-1build1 [902 kB] 778s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 778s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggthemes all 5.1.0-1 [434 kB] 779s Get:234 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-goftest arm64 1.2-3-1 [60.2 kB] 779s Get:235 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 779s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-zoo arm64 1.8-12-2 [984 kB] 779s Get:237 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sftime all 0.2-0-6 [168 kB] 779s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xts arm64 0.14.1-1 [1189 kB] 779s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-intervals arm64 0.15.5-1 [602 kB] 779s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spacetime all 1.3-2-2 [2775 kB] 780s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stars all 0.6-7-1 [4411 kB] 780s Get:242 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gstat arm64 2.1-2-1 [2332 kB] 780s Get:243 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.50+dfsg-1 [567 kB] 780s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 780s Get:245 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 780s Get:246 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 780s Get:247 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 780s Get:248 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 781s Get:249 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 781s Get:250 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lmtest arm64 0.9.40-1 [396 kB] 781s Get:251 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lwgeom arm64 0.2-14-1 [394 kB] 781s Get:252 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-maps arm64 3.4.2-1 [2362 kB] 781s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mapdata arm64 2.3.1-1 [23.5 MB] 783s Get:254 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-misctools all 0.6-28-1 [99.9 kB] 783s Get:255 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB] 783s Get:256 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-maxlik all 1.5-2.1-1 [1083 kB] 783s Get:257 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rnetcdf arm64 2.9-1-1build2 [228 kB] 784s Get:258 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 784s Get:259 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ncmeta all 0.3.6-1 [360 kB] 784s Get:260 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB] 784s Get:261 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 784s Get:262 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pcict arm64 0.5-4.4-1 [94.0 kB] 784s Get:263 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 784s Get:264 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB] 784s Get:265 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB] 784s Get:266 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB] 784s Get:267 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rdpack all 2.6.2-1 [757 kB] 785s Get:268 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plm all 2.6-5-1 [1815 kB] 785s Get:269 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 785s Get:270 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-randomforest arm64 4.7-1.2-1 [216 kB] 785s Get:271 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.54-1 [147 kB] 785s Get:272 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 785s Get:273 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 785s Get:274 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 785s Get:275 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 785s Get:276 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 785s Get:277 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 786s Get:278 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 786s Get:279 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rpart arm64 4.1.24-1 [665 kB] 786s Get:280 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.utils arm64 3.1-2-1 [381 kB] 786s Get:281 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.data all 3.1-4-1 [4047 kB] 787s Get:282 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.geom arm64 3.2-9-2 [3939 kB] 787s Get:283 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.random arm64 3.2-3-1 [1157 kB] 787s Get:284 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tensor all 1.5-4 [15.7 kB] 787s Get:285 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.sparse arm64 3.1-0-1 [218 kB] 787s Get:286 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.explore arm64 3.2-7-1 [3413 kB] 787s Get:287 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.model arm64 3.2-11-1 [3384 kB] 788s Get:288 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.linnet arm64 3.1-5-1 [1468 kB] 789s Get:289 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat arm64 3.0-8-1 [3881 kB] 789s Get:290 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-1 [150 kB] 789s Get:291 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 789s Get:292 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 789s Preconfiguring packages ... 789s Fetched 290 MB in 6min 0s (808 kB/s) 789s Selecting previously unselected package fonts-dejavu-mono. 789s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116576 files and directories currently installed.) 789s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 789s Unpacking fonts-dejavu-mono (2.37-8) ... 790s Selecting previously unselected package fonts-dejavu-core. 790s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 790s Unpacking fonts-dejavu-core (2.37-8) ... 790s Selecting previously unselected package fontconfig-config. 790s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 790s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 790s Selecting previously unselected package libfontconfig1:arm64. 790s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 790s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 790s Selecting previously unselected package fontconfig. 790s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 790s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 790s Selecting previously unselected package fonts-font-awesome. 790s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 790s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 790s Selecting previously unselected package fonts-glyphicons-halflings. 790s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 790s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 790s Selecting previously unselected package fonts-mathjax. 790s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 790s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 791s Selecting previously unselected package gdal-data. 791s Preparing to unpack .../008-gdal-data_3.10.1+dfsg-1build2_all.deb ... 791s Unpacking gdal-data (3.10.1+dfsg-1build2) ... 791s Selecting previously unselected package gdal-plugins:arm64. 791s Preparing to unpack .../009-gdal-plugins_3.10.1+dfsg-1build2_arm64.deb ... 791s Unpacking gdal-plugins:arm64 (3.10.1+dfsg-1build2) ... 791s Selecting previously unselected package javascript-common. 791s Preparing to unpack .../010-javascript-common_11+nmu1_all.deb ... 791s Unpacking javascript-common (11+nmu1) ... 791s Selecting previously unselected package libabsl20230802:arm64. 791s Preparing to unpack .../011-libabsl20230802_20230802.1-4ubuntu2_arm64.deb ... 791s Unpacking libabsl20230802:arm64 (20230802.1-4ubuntu2) ... 791s Selecting previously unselected package libaec0:arm64. 791s Preparing to unpack .../012-libaec0_1.1.3-1_arm64.deb ... 791s Unpacking libaec0:arm64 (1.1.3-1) ... 791s Selecting previously unselected package libaom3:arm64. 791s Preparing to unpack .../013-libaom3_3.11.0-1_arm64.deb ... 791s Unpacking libaom3:arm64 (3.11.0-1) ... 791s Selecting previously unselected package libblas3:arm64. 791s Preparing to unpack .../014-libblas3_3.12.0-4_arm64.deb ... 791s Unpacking libblas3:arm64 (3.12.0-4) ... 791s Selecting previously unselected package libgfortran5:arm64. 791s Preparing to unpack .../015-libgfortran5_14.2.0-13ubuntu1_arm64.deb ... 791s Unpacking libgfortran5:arm64 (14.2.0-13ubuntu1) ... 791s Selecting previously unselected package liblapack3:arm64. 791s Preparing to unpack .../016-liblapack3_3.12.0-4_arm64.deb ... 791s Unpacking liblapack3:arm64 (3.12.0-4) ... 791s Selecting previously unselected package libarpack2t64:arm64. 791s Preparing to unpack .../017-libarpack2t64_3.9.1-4_arm64.deb ... 791s Unpacking libarpack2t64:arm64 (3.9.1-4) ... 791s Selecting previously unselected package libarmadillo14. 791s Preparing to unpack .../018-libarmadillo14_1%3a14.2.1+dfsg-1_arm64.deb ... 791s Unpacking libarmadillo14 (1:14.2.1+dfsg-1) ... 791s Selecting previously unselected package libdav1d7:arm64. 791s Preparing to unpack .../019-libdav1d7_1.5.1-1_arm64.deb ... 791s Unpacking libdav1d7:arm64 (1.5.1-1) ... 791s Selecting previously unselected package libgav1-1:arm64. 791s Preparing to unpack .../020-libgav1-1_0.19.0-3_arm64.deb ... 791s Unpacking libgav1-1:arm64 (0.19.0-3) ... 791s Selecting previously unselected package librav1e0.7:arm64. 792s Preparing to unpack .../021-librav1e0.7_0.7.1-9_arm64.deb ... 792s Unpacking librav1e0.7:arm64 (0.7.1-9) ... 792s Selecting previously unselected package libsvtav1enc2:arm64. 792s Preparing to unpack .../022-libsvtav1enc2_2.3.0+dfsg-1_arm64.deb ... 792s Unpacking libsvtav1enc2:arm64 (2.3.0+dfsg-1) ... 792s Selecting previously unselected package libjpeg-turbo8:arm64. 792s Preparing to unpack .../023-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 792s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 792s Selecting previously unselected package libjpeg8:arm64. 792s Preparing to unpack .../024-libjpeg8_8c-2ubuntu11_arm64.deb ... 792s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 792s Selecting previously unselected package libyuv0:arm64. 792s Preparing to unpack .../025-libyuv0_0.0.1899.20250103-1_arm64.deb ... 792s Unpacking libyuv0:arm64 (0.0.1899.20250103-1) ... 792s Selecting previously unselected package libavif16:arm64. 792s Preparing to unpack .../026-libavif16_1.1.1-1ubuntu1_arm64.deb ... 792s Unpacking libavif16:arm64 (1.1.1-1ubuntu1) ... 792s Selecting previously unselected package libsnappy1v5:arm64. 792s Preparing to unpack .../027-libsnappy1v5_1.2.1-1_arm64.deb ... 792s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 792s Selecting previously unselected package libblosc1:arm64. 792s Preparing to unpack .../028-libblosc1_1.21.5+ds-1build1_arm64.deb ... 792s Unpacking libblosc1:arm64 (1.21.5+ds-1build1) ... 792s Selecting previously unselected package libpixman-1-0:arm64. 792s Preparing to unpack .../029-libpixman-1-0_0.44.0-3_arm64.deb ... 792s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 792s Selecting previously unselected package libxcb-render0:arm64. 792s Preparing to unpack .../030-libxcb-render0_1.17.0-2_arm64.deb ... 792s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 792s Selecting previously unselected package libxcb-shm0:arm64. 792s Preparing to unpack .../031-libxcb-shm0_1.17.0-2_arm64.deb ... 792s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 792s Selecting previously unselected package libxrender1:arm64. 792s Preparing to unpack .../032-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 792s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 792s Selecting previously unselected package libcairo2:arm64. 792s Preparing to unpack .../033-libcairo2_1.18.2-2_arm64.deb ... 792s Unpacking libcairo2:arm64 (1.18.2-2) ... 792s Selecting previously unselected package libcfitsio10t64:arm64. 792s Preparing to unpack .../034-libcfitsio10t64_4.5.0-5_arm64.deb ... 792s Unpacking libcfitsio10t64:arm64 (4.5.0-5) ... 792s Selecting previously unselected package libdatrie1:arm64. 792s Preparing to unpack .../035-libdatrie1_0.2.13-3build1_arm64.deb ... 792s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 792s Selecting previously unselected package libde265-0:arm64. 792s Preparing to unpack .../036-libde265-0_1.0.15-1build4_arm64.deb ... 792s Unpacking libde265-0:arm64 (1.0.15-1build4) ... 792s Selecting previously unselected package libdeflate0:arm64. 793s Preparing to unpack .../037-libdeflate0_1.23-1_arm64.deb ... 793s Unpacking libdeflate0:arm64 (1.23-1) ... 793s Selecting previously unselected package libfyba0t64:arm64. 793s Preparing to unpack .../038-libfyba0t64_4.1.1-11build1_arm64.deb ... 793s Unpacking libfyba0t64:arm64 (4.1.1-11build1) ... 793s Selecting previously unselected package libminizip1t64:arm64. 793s Preparing to unpack .../039-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 793s Unpacking libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 793s Selecting previously unselected package libfreexl1:arm64. 793s Preparing to unpack .../040-libfreexl1_2.0.0-1build2_arm64.deb ... 793s Unpacking libfreexl1:arm64 (2.0.0-1build2) ... 793s Selecting previously unselected package libgeos3.13.0:arm64. 793s Preparing to unpack .../041-libgeos3.13.0_3.13.0-1_arm64.deb ... 793s Unpacking libgeos3.13.0:arm64 (3.13.0-1) ... 793s Selecting previously unselected package libgeos-c1t64:arm64. 793s Preparing to unpack .../042-libgeos-c1t64_3.13.0-1_arm64.deb ... 793s Unpacking libgeos-c1t64:arm64 (3.13.0-1) ... 793s Selecting previously unselected package proj-data. 793s Preparing to unpack .../043-proj-data_9.5.1-1_all.deb ... 793s Unpacking proj-data (9.5.1-1) ... 793s Selecting previously unselected package libjbig0:arm64. 793s Preparing to unpack .../044-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 793s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 793s Selecting previously unselected package liblerc4:arm64. 793s Preparing to unpack .../045-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 793s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 793s Selecting previously unselected package libsharpyuv0:arm64. 793s Preparing to unpack .../046-libsharpyuv0_1.5.0-0.1_arm64.deb ... 793s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 793s Selecting previously unselected package libwebp7:arm64. 793s Preparing to unpack .../047-libwebp7_1.5.0-0.1_arm64.deb ... 793s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 793s Selecting previously unselected package libtiff6:arm64. 793s Preparing to unpack .../048-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 793s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 793s Selecting previously unselected package libproj25:arm64. 793s Preparing to unpack .../049-libproj25_9.5.1-1_arm64.deb ... 793s Unpacking libproj25:arm64 (9.5.1-1) ... 794s Selecting previously unselected package libgeotiff5:arm64. 794s Preparing to unpack .../050-libgeotiff5_1.7.3-1_arm64.deb ... 794s Unpacking libgeotiff5:arm64 (1.7.3-1) ... 794s Selecting previously unselected package libgif7:arm64. 794s Preparing to unpack .../051-libgif7_5.2.2-1ubuntu1_arm64.deb ... 794s Unpacking libgif7:arm64 (5.2.2-1ubuntu1) ... 794s Selecting previously unselected package libsz2:arm64. 794s Preparing to unpack .../052-libsz2_1.1.3-1_arm64.deb ... 794s Unpacking libsz2:arm64 (1.1.3-1) ... 794s Selecting previously unselected package libhdf4-0-alt:arm64. 794s Preparing to unpack .../053-libhdf4-0-alt_4.3.0-1_arm64.deb ... 794s Unpacking libhdf4-0-alt:arm64 (4.3.0-1) ... 794s Selecting previously unselected package libhdf5-310:arm64. 794s Preparing to unpack .../054-libhdf5-310_1.14.5+repack-3_arm64.deb ... 794s Unpacking libhdf5-310:arm64 (1.14.5+repack-3) ... 794s Selecting previously unselected package libheif-plugin-aomdec:arm64. 794s Preparing to unpack .../055-libheif-plugin-aomdec_1.19.5-1build1_arm64.deb ... 794s Unpacking libheif-plugin-aomdec:arm64 (1.19.5-1build1) ... 794s Selecting previously unselected package libheif-plugin-libde265:arm64. 794s Preparing to unpack .../056-libheif-plugin-libde265_1.19.5-1build1_arm64.deb ... 794s Unpacking libheif-plugin-libde265:arm64 (1.19.5-1build1) ... 794s Selecting previously unselected package libheif1:arm64. 794s Preparing to unpack .../057-libheif1_1.19.5-1build1_arm64.deb ... 794s Unpacking libheif1:arm64 (1.19.5-1build1) ... 794s Selecting previously unselected package liburiparser1:arm64. 794s Preparing to unpack .../058-liburiparser1_0.9.8+dfsg-2_arm64.deb ... 794s Unpacking liburiparser1:arm64 (0.9.8+dfsg-2) ... 794s Selecting previously unselected package libkmlbase1t64:arm64. 794s Preparing to unpack .../059-libkmlbase1t64_1.3.0-12build1_arm64.deb ... 794s Unpacking libkmlbase1t64:arm64 (1.3.0-12build1) ... 794s Selecting previously unselected package libkmldom1t64:arm64. 794s Preparing to unpack .../060-libkmldom1t64_1.3.0-12build1_arm64.deb ... 794s Unpacking libkmldom1t64:arm64 (1.3.0-12build1) ... 794s Selecting previously unselected package libkmlengine1t64:arm64. 794s Preparing to unpack .../061-libkmlengine1t64_1.3.0-12build1_arm64.deb ... 794s Unpacking libkmlengine1t64:arm64 (1.3.0-12build1) ... 794s Selecting previously unselected package mysql-common. 794s Preparing to unpack .../062-mysql-common_5.8+1.1.1_all.deb ... 794s Unpacking mysql-common (5.8+1.1.1) ... 794s Selecting previously unselected package libmysqlclient24:arm64. 794s Preparing to unpack .../063-libmysqlclient24_8.4.4-0ubuntu1_arm64.deb ... 794s Unpacking libmysqlclient24:arm64 (8.4.4-0ubuntu1) ... 794s Selecting previously unselected package libhdf5-hl-310:arm64. 795s Preparing to unpack .../064-libhdf5-hl-310_1.14.5+repack-3_arm64.deb ... 795s Unpacking libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 795s Selecting previously unselected package libnetcdf19t64:arm64. 795s Preparing to unpack .../065-libnetcdf19t64_1%3a4.9.2-6ubuntu2_arm64.deb ... 795s Unpacking libnetcdf19t64:arm64 (1:4.9.2-6ubuntu2) ... 795s Selecting previously unselected package libltdl7:arm64. 795s Preparing to unpack .../066-libltdl7_2.5.4-2.1_arm64.deb ... 795s Unpacking libltdl7:arm64 (2.5.4-2.1) ... 795s Selecting previously unselected package libodbc2:arm64. 795s Preparing to unpack .../067-libodbc2_2.3.12-2ubuntu1_arm64.deb ... 795s Unpacking libodbc2:arm64 (2.3.12-2ubuntu1) ... 795s Selecting previously unselected package unixodbc-common. 795s Preparing to unpack .../068-unixodbc-common_2.3.12-2ubuntu1_all.deb ... 795s Unpacking unixodbc-common (2.3.12-2ubuntu1) ... 795s Selecting previously unselected package libodbcinst2:arm64. 795s Preparing to unpack .../069-libodbcinst2_2.3.12-2ubuntu1_arm64.deb ... 795s Unpacking libodbcinst2:arm64 (2.3.12-2ubuntu1) ... 795s Selecting previously unselected package libogdi4.1:arm64. 795s Preparing to unpack .../070-libogdi4.1_4.1.1+ds-5_arm64.deb ... 795s Unpacking libogdi4.1:arm64 (4.1.1+ds-5) ... 795s Selecting previously unselected package libopenjp2-7:arm64. 795s Preparing to unpack .../071-libopenjp2-7_2.5.0-2ubuntu3_arm64.deb ... 795s Unpacking libopenjp2-7:arm64 (2.5.0-2ubuntu3) ... 795s Selecting previously unselected package libgpgmepp6t64:arm64. 795s Preparing to unpack .../072-libgpgmepp6t64_1.24.1-2ubuntu1_arm64.deb ... 795s Unpacking libgpgmepp6t64:arm64 (1.24.1-2ubuntu1) ... 795s Selecting previously unselected package liblcms2-2:arm64. 795s Preparing to unpack .../073-liblcms2-2_2.16-2_arm64.deb ... 795s Unpacking liblcms2-2:arm64 (2.16-2) ... 795s Selecting previously unselected package libpoppler145:arm64. 795s Preparing to unpack .../074-libpoppler145_25.01.0-2_arm64.deb ... 795s Unpacking libpoppler145:arm64 (25.01.0-2) ... 795s Selecting previously unselected package libpq5:arm64. 795s Preparing to unpack .../075-libpq5_17.2-1build2_arm64.deb ... 795s Unpacking libpq5:arm64 (17.2-1build2) ... 795s Selecting previously unselected package libqhull-r8.0:arm64. 795s Preparing to unpack .../076-libqhull-r8.0_2020.2-6build1_arm64.deb ... 795s Unpacking libqhull-r8.0:arm64 (2020.2-6build1) ... 795s Selecting previously unselected package librttopo1:arm64. 795s Preparing to unpack .../077-librttopo1_1.1.0-3build2_arm64.deb ... 795s Unpacking librttopo1:arm64 (1.1.0-3build2) ... 796s Selecting previously unselected package libspatialite8t64:arm64. 796s Preparing to unpack .../078-libspatialite8t64_5.1.0-3build1_arm64.deb ... 796s Unpacking libspatialite8t64:arm64 (5.1.0-3build1) ... 796s Selecting previously unselected package libxerces-c3.2t64:arm64. 796s Preparing to unpack .../079-libxerces-c3.2t64_3.2.4+debian-1.3build1_arm64.deb ... 796s Unpacking libxerces-c3.2t64:arm64 (3.2.4+debian-1.3build1) ... 796s Selecting previously unselected package libgdal36:arm64. 796s Preparing to unpack .../080-libgdal36_3.10.1+dfsg-1build2_arm64.deb ... 796s Unpacking libgdal36:arm64 (3.10.1+dfsg-1build2) ... 796s Selecting previously unselected package libgomp1:arm64. 796s Preparing to unpack .../081-libgomp1_14.2.0-13ubuntu1_arm64.deb ... 796s Unpacking libgomp1:arm64 (14.2.0-13ubuntu1) ... 796s Selecting previously unselected package libgraphite2-3:arm64. 796s Preparing to unpack .../082-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 796s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 796s Selecting previously unselected package libharfbuzz0b:arm64. 796s Preparing to unpack .../083-libharfbuzz0b_10.2.0-1_arm64.deb ... 796s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 796s Selecting previously unselected package x11-common. 796s Preparing to unpack .../084-x11-common_1%3a7.7+23ubuntu3_all.deb ... 796s Unpacking x11-common (1:7.7+23ubuntu3) ... 796s Selecting previously unselected package libice6:arm64. 796s Preparing to unpack .../085-libice6_2%3a1.1.1-1_arm64.deb ... 796s Unpacking libice6:arm64 (2:1.1.1-1) ... 796s Selecting previously unselected package libjs-bootstrap. 796s Preparing to unpack .../086-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 796s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 797s Selecting previously unselected package libjs-popper.js. 797s Preparing to unpack .../087-libjs-popper.js_1.16.1+ds-6_all.deb ... 797s Unpacking libjs-popper.js (1.16.1+ds-6) ... 797s Selecting previously unselected package libjs-bootstrap4. 797s Preparing to unpack .../088-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 797s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 797s Selecting previously unselected package libjs-d3. 797s Preparing to unpack .../089-libjs-d3_3.5.17-4_all.deb ... 797s Unpacking libjs-d3 (3.5.17-4) ... 797s Selecting previously unselected package libjs-es5-shim. 797s Preparing to unpack .../090-libjs-es5-shim_4.6.7-2_all.deb ... 797s Unpacking libjs-es5-shim (4.6.7-2) ... 797s Selecting previously unselected package libjs-highlight.js. 797s Preparing to unpack .../091-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 797s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 797s Selecting previously unselected package libjs-jquery. 797s Preparing to unpack .../092-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 797s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 797s Selecting previously unselected package libjs-jquery-datatables. 797s Preparing to unpack .../093-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 797s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 797s Selecting previously unselected package libjs-sifter.js. 797s Preparing to unpack .../094-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 797s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 797s Selecting previously unselected package libjs-microplugin.js. 797s Preparing to unpack .../095-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 797s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 797s Selecting previously unselected package libjs-jquery-selectize.js. 797s Preparing to unpack .../096-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 797s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 797s Selecting previously unselected package libjs-jquery-ui. 797s Preparing to unpack .../097-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 797s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 797s Selecting previously unselected package libjs-json. 797s Preparing to unpack .../098-libjs-json_0~20221030+~1.0.8-1_all.deb ... 797s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 797s Selecting previously unselected package libjs-prettify. 797s Preparing to unpack .../099-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 797s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 797s Selecting previously unselected package liblua5.4-0:arm64. 797s Preparing to unpack .../100-liblua5.4-0_5.4.7-1_arm64.deb ... 797s Unpacking liblua5.4-0:arm64 (5.4.7-1) ... 798s Selecting previously unselected package libthai-data. 798s Preparing to unpack .../101-libthai-data_0.1.29-2build1_all.deb ... 798s Unpacking libthai-data (0.1.29-2build1) ... 798s Selecting previously unselected package libthai0:arm64. 798s Preparing to unpack .../102-libthai0_0.1.29-2build1_arm64.deb ... 798s Unpacking libthai0:arm64 (0.1.29-2build1) ... 798s Selecting previously unselected package libpango-1.0-0:arm64. 798s Preparing to unpack .../103-libpango-1.0-0_1.56.1-1_arm64.deb ... 798s Unpacking libpango-1.0-0:arm64 (1.56.1-1) ... 798s Selecting previously unselected package libpangoft2-1.0-0:arm64. 798s Preparing to unpack .../104-libpangoft2-1.0-0_1.56.1-1_arm64.deb ... 798s Unpacking libpangoft2-1.0-0:arm64 (1.56.1-1) ... 798s Selecting previously unselected package libpangocairo-1.0-0:arm64. 798s Preparing to unpack .../105-libpangocairo-1.0-0_1.56.1-1_arm64.deb ... 798s Unpacking libpangocairo-1.0-0:arm64 (1.56.1-1) ... 798s Selecting previously unselected package libpaper2:arm64. 798s Preparing to unpack .../106-libpaper2_2.2.5-0.3_arm64.deb ... 798s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 798s Selecting previously unselected package libpaper-utils. 798s Preparing to unpack .../107-libpaper-utils_2.2.5-0.3_arm64.deb ... 798s Unpacking libpaper-utils (2.2.5-0.3) ... 798s Selecting previously unselected package libsm6:arm64. 798s Preparing to unpack .../108-libsm6_2%3a1.2.4-1_arm64.deb ... 798s Unpacking libsm6:arm64 (2:1.2.4-1) ... 798s Selecting previously unselected package libtcl8.6:arm64. 798s Preparing to unpack .../109-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 798s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 798s Selecting previously unselected package libxft2:arm64. 798s Preparing to unpack .../110-libxft2_2.3.6-1build1_arm64.deb ... 798s Unpacking libxft2:arm64 (2.3.6-1build1) ... 798s Selecting previously unselected package libxss1:arm64. 798s Preparing to unpack .../111-libxss1_1%3a1.2.3-1build3_arm64.deb ... 798s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 798s Selecting previously unselected package libtk8.6:arm64. 798s Preparing to unpack .../112-libtk8.6_8.6.16-1_arm64.deb ... 798s Unpacking libtk8.6:arm64 (8.6.16-1) ... 798s Selecting previously unselected package libudunits2-data. 798s Preparing to unpack .../113-libudunits2-data_2.2.28-7build1_all.deb ... 798s Unpacking libudunits2-data (2.2.28-7build1) ... 798s Selecting previously unselected package libudunits2-0. 798s Preparing to unpack .../114-libudunits2-0_2.2.28-7build1_arm64.deb ... 798s Unpacking libudunits2-0 (2.2.28-7build1) ... 799s Selecting previously unselected package libxt6t64:arm64. 799s Preparing to unpack .../115-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 799s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 799s Selecting previously unselected package zip. 799s Preparing to unpack .../116-zip_3.0-14ubuntu2_arm64.deb ... 799s Unpacking zip (3.0-14ubuntu2) ... 799s Selecting previously unselected package unzip. 799s Preparing to unpack .../117-unzip_6.0-28ubuntu6_arm64.deb ... 799s Unpacking unzip (6.0-28ubuntu6) ... 799s Selecting previously unselected package xdg-utils. 799s Preparing to unpack .../118-xdg-utils_1.2.1-0ubuntu1_all.deb ... 799s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 799s Selecting previously unselected package r-base-core. 799s Preparing to unpack .../119-r-base-core_4.4.2-1build1_arm64.deb ... 799s Unpacking r-base-core (4.4.2-1build1) ... 799s Selecting previously unselected package r-cran-littler. 799s Preparing to unpack .../120-r-cran-littler_0.3.20-2_arm64.deb ... 799s Unpacking r-cran-littler (0.3.20-2) ... 799s Selecting previously unselected package littler. 799s Preparing to unpack .../121-littler_0.3.20-2_all.deb ... 799s Unpacking littler (0.3.20-2) ... 799s Selecting previously unselected package node-bootstrap-sass. 799s Preparing to unpack .../122-node-bootstrap-sass_3.4.3-2_all.deb ... 799s Unpacking node-bootstrap-sass (3.4.3-2) ... 799s Selecting previously unselected package node-html5shiv. 799s Preparing to unpack .../123-node-html5shiv_3.7.3+dfsg-5_all.deb ... 799s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 800s Selecting previously unselected package node-normalize.css. 800s Preparing to unpack .../124-node-normalize.css_8.0.1-5_all.deb ... 800s Unpacking node-normalize.css (8.0.1-5) ... 800s Selecting previously unselected package pandoc-data. 800s Preparing to unpack .../125-pandoc-data_3.1.11.1-3build1_all.deb ... 800s Unpacking pandoc-data (3.1.11.1-3build1) ... 800s Selecting previously unselected package pandoc. 800s Preparing to unpack .../126-pandoc_3.1.11.1+ds-2_arm64.deb ... 800s Unpacking pandoc (3.1.11.1+ds-2) ... 801s Selecting previously unselected package r-cran-abind. 801s Preparing to unpack .../127-r-cran-abind_1.4-8-1_all.deb ... 801s Unpacking r-cran-abind (1.4-8-1) ... 801s Selecting previously unselected package r-cran-cli. 801s Preparing to unpack .../128-r-cran-cli_3.6.3-1_arm64.deb ... 801s Unpacking r-cran-cli (3.6.3-1) ... 801s Selecting previously unselected package r-cran-generics. 801s Preparing to unpack .../129-r-cran-generics_0.1.3-1_all.deb ... 801s Unpacking r-cran-generics (0.1.3-1) ... 801s Selecting previously unselected package r-cran-glue. 801s Preparing to unpack .../130-r-cran-glue_1.8.0-1_arm64.deb ... 801s Unpacking r-cran-glue (1.8.0-1) ... 801s Selecting previously unselected package r-cran-rlang. 801s Preparing to unpack .../131-r-cran-rlang_1.1.5-1_arm64.deb ... 801s Unpacking r-cran-rlang (1.1.5-1) ... 801s Selecting previously unselected package r-cran-lifecycle. 801s Preparing to unpack .../132-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 801s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 801s Selecting previously unselected package r-cran-magrittr. 802s Preparing to unpack .../133-r-cran-magrittr_2.0.3-1_arm64.deb ... 802s Unpacking r-cran-magrittr (2.0.3-1) ... 802s Selecting previously unselected package r-cran-utf8. 802s Preparing to unpack .../134-r-cran-utf8_1.2.4-1_arm64.deb ... 802s Unpacking r-cran-utf8 (1.2.4-1) ... 802s Selecting previously unselected package r-cran-vctrs. 802s Preparing to unpack .../135-r-cran-vctrs_0.6.5-1_arm64.deb ... 802s Unpacking r-cran-vctrs (0.6.5-1) ... 802s Selecting previously unselected package r-cran-pillar. 802s Preparing to unpack .../136-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 802s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 802s Selecting previously unselected package r-cran-r6. 802s Preparing to unpack .../137-r-cran-r6_2.5.1-1_all.deb ... 802s Unpacking r-cran-r6 (2.5.1-1) ... 802s Selecting previously unselected package r-cran-fansi. 802s Preparing to unpack .../138-r-cran-fansi_1.0.5-1_arm64.deb ... 802s Unpacking r-cran-fansi (1.0.5-1) ... 802s Selecting previously unselected package r-cran-pkgconfig. 802s Preparing to unpack .../139-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 802s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 802s Selecting previously unselected package r-cran-tibble. 802s Preparing to unpack .../140-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 802s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 802s Selecting previously unselected package r-cran-withr. 802s Preparing to unpack .../141-r-cran-withr_3.0.2+dfsg-1_all.deb ... 802s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 802s Selecting previously unselected package r-cran-tidyselect. 802s Preparing to unpack .../142-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 802s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 802s Selecting previously unselected package r-cran-dplyr. 802s Preparing to unpack .../143-r-cran-dplyr_1.1.4-4_arm64.deb ... 802s Unpacking r-cran-dplyr (1.1.4-4) ... 802s Selecting previously unselected package r-cran-purrr. 802s Preparing to unpack .../144-r-cran-purrr_1.0.2-1_arm64.deb ... 802s Unpacking r-cran-purrr (1.0.2-1) ... 802s Selecting previously unselected package r-cran-mass. 802s Preparing to unpack .../145-r-cran-mass_7.3-64-1_arm64.deb ... 802s Unpacking r-cran-mass (7.3-64-1) ... 802s Selecting previously unselected package r-cran-class. 803s Preparing to unpack .../146-r-cran-class_7.3-23-1_arm64.deb ... 803s Unpacking r-cran-class (7.3-23-1) ... 803s Selecting previously unselected package r-cran-proxy. 803s Preparing to unpack .../147-r-cran-proxy_0.4-27-1_arm64.deb ... 803s Unpacking r-cran-proxy (0.4-27-1) ... 803s Selecting previously unselected package r-cran-e1071. 803s Preparing to unpack .../148-r-cran-e1071_1.7-16-1_arm64.deb ... 803s Unpacking r-cran-e1071 (1.7-16-1) ... 803s Selecting previously unselected package r-cran-kernsmooth. 803s Preparing to unpack .../149-r-cran-kernsmooth_2.23-26-1_arm64.deb ... 803s Unpacking r-cran-kernsmooth (2.23-26-1) ... 803s Selecting previously unselected package r-cran-classint. 803s Preparing to unpack .../150-r-cran-classint_0.4-11+dfsg-1_arm64.deb ... 803s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 803s Selecting previously unselected package r-cran-dbi. 803s Preparing to unpack .../151-r-cran-dbi_1.2.3-1_all.deb ... 803s Unpacking r-cran-dbi (1.2.3-1) ... 803s Selecting previously unselected package r-cran-pkgkitten. 803s Preparing to unpack .../152-r-cran-pkgkitten_0.2.4-1_all.deb ... 803s Unpacking r-cran-pkgkitten (0.2.4-1) ... 803s Selecting previously unselected package r-cran-rcpp. 803s Preparing to unpack .../153-r-cran-rcpp_1.0.14-1_arm64.deb ... 803s Unpacking r-cran-rcpp (1.0.14-1) ... 803s Selecting previously unselected package r-cran-wk. 803s Preparing to unpack .../154-r-cran-wk_0.9.4-1_arm64.deb ... 803s Unpacking r-cran-wk (0.9.4-1) ... 803s Selecting previously unselected package r-cran-s2. 803s Preparing to unpack .../155-r-cran-s2_1.1.7-1_arm64.deb ... 803s Unpacking r-cran-s2 (1.1.7-1) ... 803s Selecting previously unselected package r-cran-units. 803s Preparing to unpack .../156-r-cran-units_0.8-5+dfsg-1_arm64.deb ... 803s Unpacking r-cran-units (0.8-5+dfsg-1) ... 803s Selecting previously unselected package r-cran-sf. 803s Preparing to unpack .../157-r-cran-sf_1.0-19+dfsg-1_arm64.deb ... 803s Unpacking r-cran-sf (1.0-19+dfsg-1) ... 803s Selecting previously unselected package r-cran-areal. 803s Preparing to unpack .../158-r-cran-areal_0.1.8+dfsg-2_all.deb ... 803s Unpacking r-cran-areal (0.1.8+dfsg-2) ... 803s Selecting previously unselected package r-cran-sys. 803s Preparing to unpack .../159-r-cran-sys_3.4.3-1_arm64.deb ... 803s Unpacking r-cran-sys (3.4.3-1) ... 804s Selecting previously unselected package r-cran-askpass. 804s Preparing to unpack .../160-r-cran-askpass_1.2.1-1_arm64.deb ... 804s Unpacking r-cran-askpass (1.2.1-1) ... 804s Selecting previously unselected package r-cran-base64enc. 804s Preparing to unpack .../161-r-cran-base64enc_0.1-3-3_arm64.deb ... 804s Unpacking r-cran-base64enc (0.1-3-3) ... 804s Selecting previously unselected package r-cran-bdsmatrix. 804s Preparing to unpack .../162-r-cran-bdsmatrix_1.3-7-1_arm64.deb ... 804s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 804s Selecting previously unselected package r-cran-brio. 804s Preparing to unpack .../163-r-cran-brio_1.1.5-1_arm64.deb ... 804s Unpacking r-cran-brio (1.1.5-1) ... 804s Selecting previously unselected package r-cran-fastmap. 804s Preparing to unpack .../164-r-cran-fastmap_1.2.0-1_arm64.deb ... 804s Unpacking r-cran-fastmap (1.2.0-1) ... 804s Selecting previously unselected package r-cran-cachem. 804s Preparing to unpack .../165-r-cran-cachem_1.1.0-1_arm64.deb ... 804s Unpacking r-cran-cachem (1.1.0-1) ... 804s Selecting previously unselected package r-cran-digest. 804s Preparing to unpack .../166-r-cran-digest_0.6.37-1_arm64.deb ... 804s Unpacking r-cran-digest (0.6.37-1) ... 804s Selecting previously unselected package r-cran-htmltools. 804s Preparing to unpack .../167-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 804s Unpacking r-cran-htmltools (0.5.8.1-1) ... 804s Selecting previously unselected package r-cran-jquerylib. 804s Preparing to unpack .../168-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 804s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 804s Selecting previously unselected package r-cran-jsonlite. 804s Preparing to unpack .../169-r-cran-jsonlite_1.8.9+dfsg-1_arm64.deb ... 804s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 804s Selecting previously unselected package r-cran-memoise. 804s Preparing to unpack .../170-r-cran-memoise_2.0.1-1_all.deb ... 804s Unpacking r-cran-memoise (2.0.1-1) ... 804s Selecting previously unselected package r-cran-mime. 804s Preparing to unpack .../171-r-cran-mime_0.12-2_arm64.deb ... 804s Unpacking r-cran-mime (0.12-2) ... 804s Selecting previously unselected package r-cran-fs. 804s Preparing to unpack .../172-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 804s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 804s Selecting previously unselected package r-cran-rappdirs. 804s Preparing to unpack .../173-r-cran-rappdirs_0.3.3-1_arm64.deb ... 804s Unpacking r-cran-rappdirs (0.3.3-1) ... 804s Selecting previously unselected package r-cran-sass. 804s Preparing to unpack .../174-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 804s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 804s Selecting previously unselected package r-cran-bslib. 804s Preparing to unpack .../175-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 804s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 805s Selecting previously unselected package r-cran-cairo. 805s Preparing to unpack .../176-r-cran-cairo_1.6-2-1_arm64.deb ... 805s Unpacking r-cran-cairo (1.6-2-1) ... 805s Selecting previously unselected package r-cran-ps. 805s Preparing to unpack .../177-r-cran-ps_1.8.1-1_arm64.deb ... 805s Unpacking r-cran-ps (1.8.1-1) ... 805s Selecting previously unselected package r-cran-processx. 805s Preparing to unpack .../178-r-cran-processx_3.8.5-1_arm64.deb ... 805s Unpacking r-cran-processx (3.8.5-1) ... 805s Selecting previously unselected package r-cran-callr. 805s Preparing to unpack .../179-r-cran-callr_3.7.6-1_all.deb ... 805s Unpacking r-cran-callr (3.7.6-1) ... 805s Selecting previously unselected package r-cran-cluster. 805s Preparing to unpack .../180-r-cran-cluster_2.1.8-1_arm64.deb ... 805s Unpacking r-cran-cluster (2.1.8-1) ... 805s Selecting previously unselected package r-cran-clue. 805s Preparing to unpack .../181-r-cran-clue_0.3-66-1_arm64.deb ... 805s Unpacking r-cran-clue (0.3-66-1) ... 805s Selecting previously unselected package r-cran-codetools. 805s Preparing to unpack .../182-r-cran-codetools_0.2-20-1_all.deb ... 805s Unpacking r-cran-codetools (0.2-20-1) ... 805s Selecting previously unselected package r-cran-collapse. 805s Preparing to unpack .../183-r-cran-collapse_2.0.19-1_arm64.deb ... 805s Unpacking r-cran-collapse (2.0.19-1) ... 805s Selecting previously unselected package r-cran-colorspace. 805s Preparing to unpack .../184-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 805s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 805s Selecting previously unselected package r-cran-commonmark. 805s Preparing to unpack .../185-r-cran-commonmark_1.9.2-2_arm64.deb ... 805s Unpacking r-cran-commonmark (1.9.2-2) ... 805s Selecting previously unselected package r-cran-lazyeval. 805s Preparing to unpack .../186-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 805s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 805s Selecting previously unselected package r-cran-rex. 805s Preparing to unpack .../187-r-cran-rex_1.2.1-1_all.deb ... 805s Unpacking r-cran-rex (1.2.1-1) ... 805s Selecting previously unselected package r-cran-curl. 805s Preparing to unpack .../188-r-cran-curl_6.1.0+dfsg-1_arm64.deb ... 805s Unpacking r-cran-curl (6.1.0+dfsg-1) ... 805s Selecting previously unselected package r-cran-openssl. 806s Preparing to unpack .../189-r-cran-openssl_2.2.0+dfsg-1_arm64.deb ... 806s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 806s Selecting previously unselected package r-cran-httr. 806s Preparing to unpack .../190-r-cran-httr_1.4.7+dfsg-1_all.deb ... 806s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 806s Selecting previously unselected package r-cran-crayon. 806s Preparing to unpack .../191-r-cran-crayon_1.5.3-1_all.deb ... 806s Unpacking r-cran-crayon (1.5.3-1) ... 806s Selecting previously unselected package r-cran-yaml. 806s Preparing to unpack .../192-r-cran-yaml_2.3.10-1_arm64.deb ... 806s Unpacking r-cran-yaml (2.3.10-1) ... 806s Selecting previously unselected package r-cran-covr. 806s Preparing to unpack .../193-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 806s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 806s Selecting previously unselected package r-cran-cpp11. 806s Preparing to unpack .../194-r-cran-cpp11_0.5.1-1_all.deb ... 806s Unpacking r-cran-cpp11 (0.5.1-1) ... 806s Selecting previously unselected package r-cran-cubelyr. 806s Preparing to unpack .../195-r-cran-cubelyr_1.0.2-1_all.deb ... 806s Unpacking r-cran-cubelyr (1.0.2-1) ... 806s Selecting previously unselected package r-cran-deldir. 806s Preparing to unpack .../196-r-cran-deldir_2.0-4-1build1_arm64.deb ... 806s Unpacking r-cran-deldir (2.0-4-1build1) ... 806s Selecting previously unselected package r-cran-desc. 806s Preparing to unpack .../197-r-cran-desc_1.4.3-1_all.deb ... 806s Unpacking r-cran-desc (1.4.3-1) ... 806s Selecting previously unselected package r-cran-diffobj. 806s Preparing to unpack .../198-r-cran-diffobj_0.3.5-1_arm64.deb ... 806s Unpacking r-cran-diffobj (0.3.5-1) ... 806s Selecting previously unselected package r-cran-evaluate. 806s Preparing to unpack .../199-r-cran-evaluate_1.0.3-1_all.deb ... 806s Unpacking r-cran-evaluate (1.0.3-1) ... 806s Selecting previously unselected package r-cran-lattice. 806s Preparing to unpack .../200-r-cran-lattice_0.22-6-1_arm64.deb ... 806s Unpacking r-cran-lattice (0.22-6-1) ... 806s Selecting previously unselected package r-cran-sp. 806s Preparing to unpack .../201-r-cran-sp_1%3a2.1-4+dfsg-1_arm64.deb ... 806s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 806s Selecting previously unselected package r-cran-terra. 806s Preparing to unpack .../202-r-cran-terra_1.8-10-1_arm64.deb ... 806s Unpacking r-cran-terra (1.8-10-1) ... 806s Selecting previously unselected package r-cran-raster. 806s Preparing to unpack .../203-r-cran-raster_3.6-31-1_arm64.deb ... 806s Unpacking r-cran-raster (3.6-31-1) ... 807s Selecting previously unselected package r-cran-exactextractr. 807s Preparing to unpack .../204-r-cran-exactextractr_0.10.0-1build2_arm64.deb ... 807s Unpacking r-cran-exactextractr (0.10.0-1build2) ... 807s Selecting previously unselected package r-cran-farver. 807s Preparing to unpack .../205-r-cran-farver_2.1.2-1_arm64.deb ... 807s Unpacking r-cran-farver (2.1.2-1) ... 807s Selecting previously unselected package r-cran-fnn. 807s Preparing to unpack .../206-r-cran-fnn_1.1.4.1-1_arm64.deb ... 807s Unpacking r-cran-fnn (1.1.4.1-1) ... 807s Selecting previously unselected package r-cran-fontawesome. 807s Preparing to unpack .../207-r-cran-fontawesome_0.5.3-1_all.deb ... 807s Unpacking r-cran-fontawesome (0.5.3-1) ... 807s Selecting previously unselected package r-cran-formula. 807s Preparing to unpack .../208-r-cran-formula_1.2-5-1_all.deb ... 807s Unpacking r-cran-formula (1.2-5-1) ... 807s Selecting previously unselected package r-cran-globals. 807s Preparing to unpack .../209-r-cran-globals_0.16.3-1_all.deb ... 807s Unpacking r-cran-globals (0.16.3-1) ... 807s Selecting previously unselected package r-cran-listenv. 807s Preparing to unpack .../210-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 807s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 807s Selecting previously unselected package r-cran-parallelly. 807s Preparing to unpack .../211-r-cran-parallelly_1.41.0-1_arm64.deb ... 807s Unpacking r-cran-parallelly (1.41.0-1) ... 807s Selecting previously unselected package r-cran-future. 807s Preparing to unpack .../212-r-cran-future_1.34.0+dfsg-1_all.deb ... 807s Unpacking r-cran-future (1.34.0+dfsg-1) ... 807s Selecting previously unselected package r-cran-future.apply. 807s Preparing to unpack .../213-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 807s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 807s Selecting previously unselected package r-cran-gtable. 807s Preparing to unpack .../214-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 807s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 807s Selecting previously unselected package r-cran-isoband. 807s Preparing to unpack .../215-r-cran-isoband_0.2.7-1_arm64.deb ... 807s Unpacking r-cran-isoband (0.2.7-1) ... 807s Selecting previously unselected package r-cran-nlme. 807s Preparing to unpack .../216-r-cran-nlme_3.1.167-1_arm64.deb ... 807s Unpacking r-cran-nlme (3.1.167-1) ... 807s Selecting previously unselected package r-cran-matrix. 807s Preparing to unpack .../217-r-cran-matrix_1.7-2-1_arm64.deb ... 807s Unpacking r-cran-matrix (1.7-2-1) ... 808s Selecting previously unselected package r-cran-mgcv. 808s Preparing to unpack .../218-r-cran-mgcv_1.9-1-1_arm64.deb ... 808s Unpacking r-cran-mgcv (1.9-1-1) ... 808s Selecting previously unselected package r-cran-labeling. 808s Preparing to unpack .../219-r-cran-labeling_0.4.3-1_all.deb ... 808s Unpacking r-cran-labeling (0.4.3-1) ... 808s Selecting previously unselected package r-cran-munsell. 808s Preparing to unpack .../220-r-cran-munsell_0.5.1-1_all.deb ... 808s Unpacking r-cran-munsell (0.5.1-1) ... 808s Selecting previously unselected package r-cran-rcolorbrewer. 808s Preparing to unpack .../221-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 808s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 808s Selecting previously unselected package r-cran-viridislite. 808s Preparing to unpack .../222-r-cran-viridislite_0.4.2-2_all.deb ... 808s Unpacking r-cran-viridislite (0.4.2-2) ... 808s Selecting previously unselected package r-cran-scales. 808s Preparing to unpack .../223-r-cran-scales_1.3.0-1_all.deb ... 808s Unpacking r-cran-scales (1.3.0-1) ... 808s Selecting previously unselected package r-cran-ggplot2. 808s Preparing to unpack .../224-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 808s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 808s Selecting previously unselected package r-cran-tweenr. 808s Preparing to unpack .../225-r-cran-tweenr_2.0.3-1_arm64.deb ... 808s Unpacking r-cran-tweenr (2.0.3-1) ... 808s Selecting previously unselected package r-cran-polyclip. 808s Preparing to unpack .../226-r-cran-polyclip_1.10-7-1_arm64.deb ... 808s Unpacking r-cran-polyclip (1.10-7-1) ... 808s Selecting previously unselected package r-cran-systemfonts. 808s Preparing to unpack .../227-r-cran-systemfonts_1.2.1-1_arm64.deb ... 808s Unpacking r-cran-systemfonts (1.2.1-1) ... 808s Selecting previously unselected package r-cran-rcppeigen. 808s Preparing to unpack .../228-r-cran-rcppeigen_0.3.4.0.2-1_arm64.deb ... 808s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 808s Selecting previously unselected package r-cran-ggforce. 808s Preparing to unpack .../229-r-cran-ggforce_0.4.2-1_arm64.deb ... 808s Unpacking r-cran-ggforce (0.4.2-1) ... 808s Selecting previously unselected package r-cran-stringi. 808s Preparing to unpack .../230-r-cran-stringi_1.8.4-1build1_arm64.deb ... 808s Unpacking r-cran-stringi (1.8.4-1build1) ... 809s Selecting previously unselected package r-cran-stringr. 809s Preparing to unpack .../231-r-cran-stringr_1.5.1-1_all.deb ... 809s Unpacking r-cran-stringr (1.5.1-1) ... 809s Selecting previously unselected package r-cran-ggthemes. 809s Preparing to unpack .../232-r-cran-ggthemes_5.1.0-1_all.deb ... 809s Unpacking r-cran-ggthemes (5.1.0-1) ... 809s Selecting previously unselected package r-cran-goftest. 809s Preparing to unpack .../233-r-cran-goftest_1.2-3-1_arm64.deb ... 809s Unpacking r-cran-goftest (1.2-3-1) ... 809s Selecting previously unselected package r-cran-gridextra. 809s Preparing to unpack .../234-r-cran-gridextra_2.3-3build1_all.deb ... 809s Unpacking r-cran-gridextra (2.3-3build1) ... 809s Selecting previously unselected package r-cran-zoo. 809s Preparing to unpack .../235-r-cran-zoo_1.8-12-2_arm64.deb ... 809s Unpacking r-cran-zoo (1.8-12-2) ... 809s Selecting previously unselected package r-cran-sftime. 809s Preparing to unpack .../236-r-cran-sftime_0.2-0-6_all.deb ... 809s Unpacking r-cran-sftime (0.2-0-6) ... 809s Selecting previously unselected package r-cran-xts. 809s Preparing to unpack .../237-r-cran-xts_0.14.1-1_arm64.deb ... 809s Unpacking r-cran-xts (0.14.1-1) ... 809s Selecting previously unselected package r-cran-intervals. 809s Preparing to unpack .../238-r-cran-intervals_0.15.5-1_arm64.deb ... 809s Unpacking r-cran-intervals (0.15.5-1) ... 809s Selecting previously unselected package r-cran-spacetime. 809s Preparing to unpack .../239-r-cran-spacetime_1.3-2-2_all.deb ... 809s Unpacking r-cran-spacetime (1.3-2-2) ... 809s Selecting previously unselected package r-cran-stars. 809s Preparing to unpack .../240-r-cran-stars_0.6-7-1_all.deb ... 809s Unpacking r-cran-stars (0.6-7-1) ... 809s Selecting previously unselected package r-cran-gstat. 809s Preparing to unpack .../241-r-cran-gstat_2.1-2-1_arm64.deb ... 809s Unpacking r-cran-gstat (2.1-2-1) ... 809s Selecting previously unselected package r-cran-xfun. 809s Preparing to unpack .../242-r-cran-xfun_0.50+dfsg-1_arm64.deb ... 809s Unpacking r-cran-xfun (0.50+dfsg-1) ... 810s Selecting previously unselected package r-cran-highr. 810s Preparing to unpack .../243-r-cran-highr_0.11+dfsg-1_all.deb ... 810s Unpacking r-cran-highr (0.11+dfsg-1) ... 810s Selecting previously unselected package r-cran-later. 810s Preparing to unpack .../244-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 810s Unpacking r-cran-later (1.4.1+dfsg-1) ... 810s Selecting previously unselected package r-cran-promises. 810s Preparing to unpack .../245-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 810s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 810s Selecting previously unselected package r-cran-httpuv. 810s Preparing to unpack .../246-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 810s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 810s Selecting previously unselected package libjs-mathjax. 810s Preparing to unpack .../247-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 810s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 810s Selecting previously unselected package r-cran-knitr. 810s Preparing to unpack .../248-r-cran-knitr_1.49+dfsg-1_all.deb ... 810s Unpacking r-cran-knitr (1.49+dfsg-1) ... 811s Selecting previously unselected package r-cran-lmtest. 811s Preparing to unpack .../249-r-cran-lmtest_0.9.40-1_arm64.deb ... 811s Unpacking r-cran-lmtest (0.9.40-1) ... 811s Selecting previously unselected package r-cran-lwgeom. 811s Preparing to unpack .../250-r-cran-lwgeom_0.2-14-1_arm64.deb ... 811s Unpacking r-cran-lwgeom (0.2-14-1) ... 811s Selecting previously unselected package r-cran-maps. 811s Preparing to unpack .../251-r-cran-maps_3.4.2-1_arm64.deb ... 811s Unpacking r-cran-maps (3.4.2-1) ... 811s Selecting previously unselected package r-cran-mapdata. 811s Preparing to unpack .../252-r-cran-mapdata_2.3.1-1_arm64.deb ... 811s Unpacking r-cran-mapdata (2.3.1-1) ... 811s Selecting previously unselected package r-cran-misctools. 811s Preparing to unpack .../253-r-cran-misctools_0.6-28-1_all.deb ... 811s Unpacking r-cran-misctools (0.6-28-1) ... 811s Selecting previously unselected package r-cran-sandwich. 811s Preparing to unpack .../254-r-cran-sandwich_3.1-1-1_all.deb ... 811s Unpacking r-cran-sandwich (3.1-1-1) ... 811s Selecting previously unselected package r-cran-maxlik. 811s Preparing to unpack .../255-r-cran-maxlik_1.5-2.1-1_all.deb ... 811s Unpacking r-cran-maxlik (1.5-2.1-1) ... 811s Selecting previously unselected package r-cran-rnetcdf. 811s Preparing to unpack .../256-r-cran-rnetcdf_2.9-1-1build2_arm64.deb ... 811s Unpacking r-cran-rnetcdf (2.9-1-1build2) ... 811s Selecting previously unselected package r-cran-tidyr. 812s Preparing to unpack .../257-r-cran-tidyr_1.3.1-1_arm64.deb ... 812s Unpacking r-cran-tidyr (1.3.1-1) ... 812s Selecting previously unselected package r-cran-ncmeta. 812s Preparing to unpack .../258-r-cran-ncmeta_0.3.6-1_all.deb ... 812s Unpacking r-cran-ncmeta (0.3.6-1) ... 812s Selecting previously unselected package r-cran-ncdfgeom. 812s Preparing to unpack .../259-r-cran-ncdfgeom_1.1.6+dfsg-1_all.deb ... 812s Unpacking r-cran-ncdfgeom (1.1.6+dfsg-1) ... 812s Selecting previously unselected package r-cran-pbapply. 812s Preparing to unpack .../260-r-cran-pbapply_1.7-2-1_all.deb ... 812s Unpacking r-cran-pbapply (1.7-2-1) ... 812s Selecting previously unselected package r-cran-pcict. 812s Preparing to unpack .../261-r-cran-pcict_0.5-4.4-1_arm64.deb ... 812s Unpacking r-cran-pcict (0.5-4.4-1) ... 812s Selecting previously unselected package r-cran-pkgbuild. 812s Preparing to unpack .../262-r-cran-pkgbuild_1.4.6-1_all.deb ... 812s Unpacking r-cran-pkgbuild (1.4.6-1) ... 812s Selecting previously unselected package r-cran-rprojroot. 812s Preparing to unpack .../263-r-cran-rprojroot_2.0.4-2_all.deb ... 812s Unpacking r-cran-rprojroot (2.0.4-2) ... 812s Selecting previously unselected package r-cran-pkgload. 812s Preparing to unpack .../264-r-cran-pkgload_1.4.0-1_all.deb ... 812s Unpacking r-cran-pkgload (1.4.0-1) ... 812s Selecting previously unselected package r-cran-rbibutils. 812s Preparing to unpack .../265-r-cran-rbibutils_2.3-1_arm64.deb ... 812s Unpacking r-cran-rbibutils (2.3-1) ... 812s Selecting previously unselected package r-cran-rdpack. 812s Preparing to unpack .../266-r-cran-rdpack_2.6.2-1_all.deb ... 812s Unpacking r-cran-rdpack (2.6.2-1) ... 812s Selecting previously unselected package r-cran-plm. 812s Preparing to unpack .../267-r-cran-plm_2.6-5-1_all.deb ... 812s Unpacking r-cran-plm (2.6-5-1) ... 812s Selecting previously unselected package r-cran-praise. 812s Preparing to unpack .../268-r-cran-praise_1.0.0-4build1_all.deb ... 812s Unpacking r-cran-praise (1.0.0-4build1) ... 812s Selecting previously unselected package r-cran-randomforest. 812s Preparing to unpack .../269-r-cran-randomforest_4.7-1.2-1_arm64.deb ... 812s Unpacking r-cran-randomforest (4.7-1.2-1) ... 812s Selecting previously unselected package r-cran-tinytex. 812s Preparing to unpack .../270-r-cran-tinytex_0.54-1_all.deb ... 812s Unpacking r-cran-tinytex (0.54-1) ... 813s Selecting previously unselected package libjs-modernizr. 813s Preparing to unpack .../271-libjs-modernizr_3.13.0-0.1_all.deb ... 813s Unpacking libjs-modernizr (3.13.0-0.1) ... 813s Selecting previously unselected package r-cran-xtable. 813s Preparing to unpack .../272-r-cran-xtable_1%3a1.8-4-2_all.deb ... 813s Unpacking r-cran-xtable (1:1.8-4-2) ... 813s Selecting previously unselected package r-cran-sourcetools. 813s Preparing to unpack .../273-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 813s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 813s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 813s Preparing to unpack .../274-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 813s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 813s Selecting previously unselected package r-cran-shiny. 813s Preparing to unpack .../275-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 813s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 813s Selecting previously unselected package r-cran-rmarkdown. 813s Preparing to unpack .../276-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 813s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 813s Selecting previously unselected package r-cran-survival. 813s Preparing to unpack .../277-r-cran-survival_3.8-3-1_arm64.deb ... 813s Unpacking r-cran-survival (3.8-3-1) ... 813s Selecting previously unselected package r-cran-rpart. 813s Preparing to unpack .../278-r-cran-rpart_4.1.24-1_arm64.deb ... 813s Unpacking r-cran-rpart (4.1.24-1) ... 813s Selecting previously unselected package r-cran-spatstat.utils. 813s Preparing to unpack .../279-r-cran-spatstat.utils_3.1-2-1_arm64.deb ... 813s Unpacking r-cran-spatstat.utils (3.1-2-1) ... 813s Selecting previously unselected package r-cran-spatstat.data. 813s Preparing to unpack .../280-r-cran-spatstat.data_3.1-4-1_all.deb ... 813s Unpacking r-cran-spatstat.data (3.1-4-1) ... 813s Selecting previously unselected package r-cran-spatstat.geom. 813s Preparing to unpack .../281-r-cran-spatstat.geom_3.2-9-2_arm64.deb ... 813s Unpacking r-cran-spatstat.geom (3.2-9-2) ... 813s Selecting previously unselected package r-cran-spatstat.random. 814s Preparing to unpack .../282-r-cran-spatstat.random_3.2-3-1_arm64.deb ... 814s Unpacking r-cran-spatstat.random (3.2-3-1) ... 814s Selecting previously unselected package r-cran-tensor. 814s Preparing to unpack .../283-r-cran-tensor_1.5-4_all.deb ... 814s Unpacking r-cran-tensor (1.5-4) ... 814s Selecting previously unselected package r-cran-spatstat.sparse. 814s Preparing to unpack .../284-r-cran-spatstat.sparse_3.1-0-1_arm64.deb ... 814s Unpacking r-cran-spatstat.sparse (3.1-0-1) ... 814s Selecting previously unselected package r-cran-spatstat.explore. 814s Preparing to unpack .../285-r-cran-spatstat.explore_3.2-7-1_arm64.deb ... 814s Unpacking r-cran-spatstat.explore (3.2-7-1) ... 814s Selecting previously unselected package r-cran-spatstat.model. 814s Preparing to unpack .../286-r-cran-spatstat.model_3.2-11-1_arm64.deb ... 814s Unpacking r-cran-spatstat.model (3.2-11-1) ... 814s Selecting previously unselected package r-cran-spatstat.linnet. 814s Preparing to unpack .../287-r-cran-spatstat.linnet_3.1-5-1_arm64.deb ... 814s Unpacking r-cran-spatstat.linnet (3.1-5-1) ... 814s Selecting previously unselected package r-cran-spatstat. 814s Preparing to unpack .../288-r-cran-spatstat_3.0-8-1_arm64.deb ... 814s Unpacking r-cran-spatstat (3.0-8-1) ... 814s Selecting previously unselected package r-cran-waldo. 814s Preparing to unpack .../289-r-cran-waldo_0.6.1-1_all.deb ... 814s Unpacking r-cran-waldo (0.6.1-1) ... 814s Selecting previously unselected package r-cran-testthat. 814s Preparing to unpack .../290-r-cran-testthat_3.2.3-1_arm64.deb ... 814s Unpacking r-cran-testthat (3.2.3-1) ... 814s Selecting previously unselected package r-cran-viridis. 814s Preparing to unpack .../291-r-cran-viridis_0.6.5-1_all.deb ... 814s Unpacking r-cran-viridis (0.6.5-1) ... 814s Setting up libjs-json (0~20221030+~1.0.8-1) ... 814s Setting up javascript-common (11+nmu1) ... 814s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 814s Setting up liblcms2-2:arm64 (2.16-2) ... 814s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 814s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 814s Setting up libgpgmepp6t64:arm64 (1.24.1-2ubuntu1) ... 814s Setting up libaom3:arm64 (3.11.0-1) ... 814s Setting up mysql-common (5.8+1.1.1) ... 814s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode 814s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 814s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 814s Setting up proj-data (9.5.1-1) ... 814s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 814s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 814s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 814s Setting up libjs-popper.js (1.16.1+ds-6) ... 814s Setting up libogdi4.1:arm64 (4.1.1+ds-5) ... 814s Setting up libxcb-render0:arm64 (1.17.0-2) ... 814s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 814s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 814s Setting up unzip (6.0-28ubuntu6) ... 814s Setting up libgeos3.13.0:arm64 (3.13.0-1) ... 814s Setting up x11-common (1:7.7+23ubuntu3) ... 816s Setting up node-html5shiv (3.7.3+dfsg-5) ... 816s Setting up libpq5:arm64 (17.2-1build2) ... 816s Setting up libdeflate0:arm64 (1.23-1) ... 816s Setting up libqhull-r8.0:arm64 (2020.2-6build1) ... 816s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 816s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 816s Setting up libxerces-c3.2t64:arm64 (3.2.4+debian-1.3build1) ... 816s Setting up libgomp1:arm64 (14.2.0-13ubuntu1) ... 816s Setting up libjs-modernizr (3.13.0-0.1) ... 816s Setting up libmysqlclient24:arm64 (8.4.4-0ubuntu1) ... 816s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 816s Setting up libaec0:arm64 (1.1.3-1) ... 816s Setting up gdal-data (3.10.1+dfsg-1build2) ... 816s Setting up libsnappy1v5:arm64 (1.2.1-1) ... 816s Setting up libjs-es5-shim (4.6.7-2) ... 816s Setting up zip (3.0-14ubuntu2) ... 816s Setting up libblas3:arm64 (3.12.0-4) ... 816s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 816s Setting up libcfitsio10t64:arm64 (4.5.0-5) ... 816s Setting up libsvtav1enc2:arm64 (2.3.0+dfsg-1) ... 816s Setting up libjs-d3 (3.5.17-4) ... 816s Setting up fonts-dejavu-mono (2.37-8) ... 816s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ... 816s Setting up fonts-dejavu-core (2.37-8) ... 816s Setting up unixodbc-common (2.3.12-2ubuntu1) ... 816s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 816s Setting up libltdl7:arm64 (2.5.4-2.1) ... 816s Setting up libgfortran5:arm64 (14.2.0-13ubuntu1) ... 816s Setting up libwebp7:arm64 (1.5.0-0.1) ... 816s Setting up libgif7:arm64 (5.2.2-1ubuntu1) ... 816s Setting up libodbc2:arm64 (2.3.12-2ubuntu1) ... 816s Setting up liburiparser1:arm64 (0.9.8+dfsg-2) ... 816s Setting up libfyba0t64:arm64 (4.1.1-11build1) ... 816s Setting up libudunits2-data (2.2.28-7build1) ... 816s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 816s Setting up libdav1d7:arm64 (1.5.1-1) ... 816s Setting up libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 816s Setting up librav1e0.7:arm64 (0.7.1-9) ... 816s Setting up libblosc1:arm64 (1.21.5+ds-1build1) ... 816s Setting up liblua5.4-0:arm64 (5.4.7-1) ... 816s Setting up libopenjp2-7:arm64 (2.5.0-2ubuntu3) ... 816s Setting up libharfbuzz0b:arm64 (10.2.0-1) ... 816s Setting up libthai-data (0.1.29-2build1) ... 816s Setting up node-bootstrap-sass (3.4.3-2) ... 816s Setting up libabsl20230802:arm64 (20230802.1-4ubuntu2) ... 816s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 816s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 816s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 816s Setting up libpaper2:arm64 (2.2.5-0.3) ... 816s Setting up pandoc-data (3.1.11.1-3build1) ... 816s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 816s Setting up libde265-0:arm64 (1.0.15-1build4) ... 816s Setting up libkmlbase1t64:arm64 (1.3.0-12build1) ... 816s Setting up node-normalize.css (8.0.1-5) ... 816s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 816s Setting up xdg-utils (1.2.1-0ubuntu1) ... 816s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 816s Setting up libsz2:arm64 (1.1.3-1) ... 816s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 816s Setting up gdal-plugins:arm64 (3.10.1+dfsg-1build2) ... 816s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 816s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 816s Setting up libice6:arm64 (2:1.1.1-1) ... 816s Setting up libodbcinst2:arm64 (2.3.12-2ubuntu1) ... 816s Setting up liblapack3:arm64 (3.12.0-4) ... 816s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 816s Setting up libudunits2-0 (2.2.28-7build1) ... 816s Setting up libarpack2t64:arm64 (3.9.1-4) ... 816s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 816s Setting up libgeos-c1t64:arm64 (3.13.0-1) ... 816s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 816s Setting up libpaper-utils (2.2.5-0.3) ... 816s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 816s Setting up libkmldom1t64:arm64 (1.3.0-12build1) ... 816s Setting up libthai0:arm64 (0.1.29-2build1) ... 816s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 816s Setting up pandoc (3.1.11.1+ds-2) ... 816s Setting up libgav1-1:arm64 (0.19.0-3) ... 816s Setting up libhdf4-0-alt:arm64 (4.3.0-1) ... 816s Setting up librttopo1:arm64 (1.1.0-3build2) ... 816s Setting up libhdf5-310:arm64 (1.14.5+repack-3) ... 816s Setting up libfreexl1:arm64 (2.0.0-1build2) ... 816s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 816s Setting up libarmadillo14 (1:14.2.1+dfsg-1) ... 816s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 816s Setting up libyuv0:arm64 (0.0.1899.20250103-1) ... 816s Setting up libsm6:arm64 (2:1.2.4-1) ... 816s Setting up libpoppler145:arm64 (25.01.0-2) ... 816s Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 816s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 817s Regenerating fonts cache... done. 817s Setting up libavif16:arm64 (1.1.1-1ubuntu1) ... 817s Setting up libnetcdf19t64:arm64 (1:4.9.2-6ubuntu2) ... 817s Setting up libxft2:arm64 (2.3.6-1build1) ... 817s Setting up libproj25:arm64 (9.5.1-1) ... 817s Setting up libtk8.6:arm64 (8.6.16-1) ... 817s Setting up libpango-1.0-0:arm64 (1.56.1-1) ... 817s Setting up libkmlengine1t64:arm64 (1.3.0-12build1) ... 817s Setting up libcairo2:arm64 (1.18.2-2) ... 817s Setting up libgeotiff5:arm64 (1.7.3-1) ... 817s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 817s Setting up libpangoft2-1.0-0:arm64 (1.56.1-1) ... 817s Setting up libpangocairo-1.0-0:arm64 (1.56.1-1) ... 817s Setting up libspatialite8t64:arm64 (5.1.0-3build1) ... 817s Setting up r-base-core (4.4.2-1build1) ... 817s Creating config file /etc/R/Renviron with new version 817s Setting up r-cran-crayon (1.5.3-1) ... 817s Setting up r-cran-labeling (0.4.3-1) ... 817s Setting up r-cran-sourcetools (0.1.7-1-1) ... 817s Setting up r-cran-lattice (0.22-6-1) ... 817s Setting up r-cran-ps (1.8.1-1) ... 818s Setting up r-cran-nlme (3.1.167-1) ... 818s Setting up r-cran-farver (2.1.2-1) ... 818s Setting up r-cran-pbapply (1.7-2-1) ... 818s Setting up r-cran-formula (1.2-5-1) ... 818s Setting up r-cran-intervals (0.15.5-1) ... 818s Setting up r-cran-spatstat.utils (3.1-2-1) ... 818s Setting up r-cran-viridislite (0.4.2-2) ... 818s Setting up r-cran-cluster (2.1.8-1) ... 818s Setting up r-cran-tensor (1.5-4) ... 818s Setting up r-cran-lazyeval (0.2.2-1build1) ... 818s Setting up r-cran-wk (0.9.4-1) ... 818s Setting up r-cran-commonmark (1.9.2-2) ... 818s Setting up r-cran-proxy (0.4-27-1) ... 818s Setting up r-cran-r6 (2.5.1-1) ... 818s Setting up r-cran-pkgkitten (0.2.4-1) ... 818s Setting up r-cran-magrittr (2.0.3-1) ... 818s Setting up r-cran-rappdirs (0.3.3-1) ... 818s Setting up r-cran-littler (0.3.20-2) ... 818s Setting up r-cran-fs (1.6.5+dfsg-1) ... 818s Setting up r-cran-rcpp (1.0.14-1) ... 818s Setting up r-cran-curl (6.1.0+dfsg-1) ... 818s Setting up r-cran-codetools (0.2-20-1) ... 818s Setting up r-cran-brio (1.1.5-1) ... 818s Setting up r-cran-diffobj (0.3.5-1) ... 818s Setting up r-cran-maps (3.4.2-1) ... 818s Setting up r-cran-rlang (1.1.5-1) ... 818s Setting up r-cran-listenv (0.9.1+dfsg-1) ... 818s Setting up littler (0.3.20-2) ... 818s Setting up r-cran-xfun (0.50+dfsg-1) ... 818s Setting up r-cran-sys (3.4.3-1) ... 818s Setting up r-cran-withr (3.0.2+dfsg-1) ... 818s Setting up r-cran-processx (3.8.5-1) ... 818s Setting up r-cran-mime (0.12-2) ... 818s Setting up r-cran-praise (1.0.0-4build1) ... 818s Setting up r-cran-generics (0.1.3-1) ... 818s Setting up r-cran-base64enc (0.1-3-3) ... 818s Setting up r-cran-abind (1.4-8-1) ... 818s Setting up r-cran-s2 (1.1.7-1) ... 818s Setting up r-cran-digest (0.6.37-1) ... 818s Setting up r-cran-yaml (2.3.10-1) ... 818s Setting up r-cran-evaluate (1.0.3-1) ... 818s Setting up r-cran-dbi (1.2.3-1) ... 818s Setting up r-cran-highr (0.11+dfsg-1) ... 818s Setting up r-cran-fansi (1.0.5-1) ... 818s Setting up r-cran-pcict (0.5-4.4-1) ... 818s Setting up r-cran-mass (7.3-64-1) ... 818s Setting up r-cran-cairo (1.6-2-1) ... 818s Setting up r-cran-mapdata (2.3.1-1) ... 818s Setting up r-cran-collapse (2.0.19-1) ... 818s Setting up r-cran-bdsmatrix (1.3-7-1) ... 818s Setting up r-cran-glue (1.8.0-1) ... 818s Setting up r-cran-xtable (1:1.8-4-2) ... 818s Setting up r-cran-polyclip (1.10-7-1) ... 818s Setting up r-cran-clue (0.3-66-1) ... 818s Setting up r-cran-cli (3.6.3-1) ... 818s Setting up r-cran-rbibutils (2.3-1) ... 818s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 818s Setting up r-cran-rprojroot (2.0.4-2) ... 818s Setting up r-cran-fnn (1.1.4.1-1) ... 818s Setting up r-cran-deldir (2.0-4-1build1) ... 818s Setting up r-cran-goftest (1.2-3-1) ... 818s Setting up r-cran-randomforest (4.7-1.2-1) ... 818s Setting up r-cran-askpass (1.2.1-1) ... 818s Setting up r-cran-fastmap (1.2.0-1) ... 818s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ... 818s Setting up r-cran-rnetcdf (2.9-1-1build2) ... 818s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 818s Setting up r-cran-sp (1:2.1-4+dfsg-1) ... 818s Setting up r-cran-utf8 (1.2.4-1) ... 818s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 818s Setting up r-cran-parallelly (1.41.0-1) ... 818s Setting up r-cran-stringi (1.8.4-1build1) ... 818s Setting up r-cran-rex (1.2.1-1) ... 818s Setting up r-cran-cpp11 (0.5.1-1) ... 818s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 818s Setting up r-cran-isoband (0.2.7-1) ... 818s Setting up r-cran-waldo (0.6.1-1) ... 818s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 818s Setting up r-cran-zoo (1.8-12-2) ... 818s Setting up r-cran-units (0.8-5+dfsg-1) ... 818s Setting up r-cran-later (1.4.1+dfsg-1) ... 818s Setting up r-cran-matrix (1.7-2-1) ... 818s Setting up r-cran-spatstat.sparse (3.1-0-1) ... 818s Setting up r-cran-htmltools (0.5.8.1-1) ... 818s Setting up r-cran-tinytex (0.54-1) ... 818s Setting up r-cran-kernsmooth (2.23-26-1) ... 818s Setting up r-cran-knitr (1.49+dfsg-1) ... 818s Setting up r-cran-mgcv (1.9-1-1) ... 818s Setting up r-cran-cachem (1.1.0-1) ... 818s Setting up r-cran-lmtest (0.9.40-1) ... 818s Setting up r-cran-sass (0.4.9+dfsg-1) ... 818s Setting up r-cran-globals (0.16.3-1) ... 818s Setting up r-cran-vctrs (0.6.5-1) ... 818s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... 818s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 818s Setting up r-cran-openssl (2.2.0+dfsg-1) ... 818s Setting up r-cran-misctools (0.6-28-1) ... 818s Setting up r-cran-stringr (1.5.1-1) ... 818s Setting up r-cran-class (7.3-23-1) ... 818s Setting up r-cran-callr (3.7.6-1) ... 818s Setting up r-cran-desc (1.4.3-1) ... 818s Setting up r-cran-munsell (0.5.1-1) ... 818s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 818s Setting up r-cran-sandwich (3.1-1-1) ... 818s Setting up r-cran-fontawesome (0.5.3-1) ... 818s Setting up r-cran-survival (3.8-3-1) ... 818s Setting up r-cran-xts (0.14.1-1) ... 818s Setting up r-cran-rdpack (2.6.2-1) ... 818s Setting up r-cran-tweenr (2.0.3-1) ... 818s Setting up r-cran-future (1.34.0+dfsg-1) ... 818s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 818s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 818s Setting up r-cran-future.apply (1.11.3+dfsg-1) ... 818s Setting up r-cran-systemfonts (1.2.1-1) ... 818s Setting up r-cran-httr (1.4.7+dfsg-1) ... 818s Setting up r-cran-gridextra (2.3-3build1) ... 818s Setting up r-cran-scales (1.3.0-1) ... 818s Setting up r-cran-memoise (2.0.1-1) ... 818s Setting up r-cran-covr (3.6.4+dfsg-1) ... 818s Setting up r-cran-promises (1.3.2+dfsg-1) ... 818s Setting up r-cran-purrr (1.0.2-1) ... 818s Setting up r-cran-e1071 (1.7-16-1) ... 818s Setting up r-cran-spatstat.data (3.1-4-1) ... 818s Setting up r-cran-maxlik (1.5-2.1-1) ... 818s Setting up r-cran-spacetime (1.3-2-2) ... 818s Setting up r-cran-spatstat.geom (3.2-9-2) ... 818s Setting up r-cran-pkgbuild (1.4.6-1) ... 818s Setting up r-cran-dplyr (1.1.4-4) ... 818s Setting up r-cran-cubelyr (1.0.2-1) ... 818s Setting up r-cran-pkgload (1.4.0-1) ... 818s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 818s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 818s Setting up r-cran-rpart (4.1.24-1) ... 818s Setting up r-cran-spatstat.random (3.2-3-1) ... 818s Setting up r-cran-plm (2.6-5-1) ... 818s Setting up r-cran-viridis (0.6.5-1) ... 818s Setting up r-cran-testthat (3.2.3-1) ... 818s Setting up r-cran-classint (0.4-11+dfsg-1) ... 818s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 818s Setting up r-cran-spatstat.explore (3.2-7-1) ... 818s Setting up r-cran-ggthemes (5.1.0-1) ... 818s Setting up r-cran-tidyr (1.3.1-1) ... 818s Setting up r-cran-ggforce (0.4.2-1) ... 818s Setting up r-cran-spatstat.model (3.2-11-1) ... 818s Setting up r-cran-shiny (1.9.1+dfsg-1) ... 818s Setting up r-cran-ncmeta (0.3.6-1) ... 818s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 818s Setting up r-cran-spatstat.linnet (3.1-5-1) ... 818s Setting up r-cran-spatstat (3.0-8-1) ... 818s Setting up libheif-plugin-aomdec:arm64 (1.19.5-1build1) ... 818s Setting up libheif-plugin-libde265:arm64 (1.19.5-1build1) ... 818s Setting up libheif1:arm64 (1.19.5-1build1) ... 818s Setting up libgdal36:arm64 (3.10.1+dfsg-1build2) ... 818s Setting up r-cran-sf (1.0-19+dfsg-1) ... 818s Setting up r-cran-stars (0.6-7-1) ... 818s Setting up r-cran-sftime (0.2-0-6) ... 818s Setting up r-cran-areal (0.1.8+dfsg-2) ... 818s Setting up r-cran-gstat (2.1-2-1) ... 818s Setting up r-cran-lwgeom (0.2-14-1) ... 818s Setting up r-cran-terra (1.8-10-1) ... 818s Setting up r-cran-ncdfgeom (1.1.6+dfsg-1) ... 818s Setting up r-cran-raster (3.6-31-1) ... 818s Setting up r-cran-exactextractr (0.10.0-1build2) ... 818s Processing triggers for install-info (7.1.1-1) ... 818s Processing triggers for libc-bin (2.40-4ubuntu1) ... 818s Processing triggers for man-db (2.13.0-1) ... 820s autopkgtest [19:14:50]: test run-unit-test: [----------------------- 821s BEGIN TEST aggregate.R 821s 821s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 821s Copyright (C) 2024 The R Foundation for Statistical Computing 821s Platform: aarch64-unknown-linux-gnu 821s 821s R is free software and comes with ABSOLUTELY NO WARRANTY. 821s You are welcome to redistribute it under certain conditions. 821s Type 'license()' or 'licence()' for distribution details. 821s 821s R is a collaborative project with many contributors. 821s Type 'contributors()' for more information and 821s 'citation()' on how to cite R or R packages in publications. 821s 821s Type 'demo()' for some demos, 'help()' for on-line help, or 821s 'help.start()' for an HTML browser interface to help. 821s Type 'q()' to quit R. 821s 821s > ## IGNORE_RDIFF_BEGIN 821s > library(stars) 821s Loading required package: abind 821s Loading required package: sf 821s Linking to GEOS 3.13.0, GDAL 3.10.1, PROJ 9.5.1; sf_use_s2() is TRUE 822s > ## IGNORE_RDIFF_END 822s > 822s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 822s + data(air) # this loads several datasets in .GlobalEnv 822s + dim(air) 822s + d = st_dimensions(station = st_set_crs(st_as_sfc(stations), 4326), time = dates) 822s + 822s + blocks = st_make_grid(st_as_sfc("POLYGON ((5.871619 47.26986, 15.03811 47.26986, 15.03811 55.05653, 5.871619 55.05653, 5.871619 47.26986))", crs = 4326), 822s + n = c(3,3)) 822s + 822s + print(aq <- st_as_stars(list(PM10 = air), dimensions = d)) 822s + print(a <- aggregate(aq, blocks, mean, na.rm = TRUE)) 822s + } 822s stars object with 2 dimensions and 1 attribute 822s attribute(s): 822s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 822s PM10 0 9.921 14.792 17.69728 21.992 274.333 157659 822s dimension(s): 822s from to offset delta refsys point 822s station 1 70 NA NA WGS 84 TRUE 822s time 1 4383 1998-01-01 1 days Date FALSE 822s values 822s station POINT (9.585911 53.67057),...,POINT (9.446661 49.24068) 822s time NULL 823s stars object with 2 dimensions and 1 attribute 823s attribute(s): 823s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 823s PM10 1 11 15.57425 18.1715 22.17197 183.271 8429 823s dimension(s): 823s from to offset delta refsys point 823s geometry 1 9 NA NA WGS 84 FALSE 823s time 1 4383 1998-01-01 1 days Date FALSE 823s values 823s geometry POLYGON ((5.871619 47.269...,...,POLYGON ((11.98261 52.460... 823s time NULL 823s > 823s > # adapted from ?read_stars: 823s > m = array(1:720, dim = c(x = 10, y = 12, t = 6)) # named dim 823s > st = st_as_stars(m) 823s > attr(st, "dimensions")$y$delta = -1 823s > attr(st, "dimensions")$y$offset = 12 823s > tm = as.Date("2019-02-19") + 1:6 823s > st = st_set_crs(st_set_dimensions(st, 3, values = tm), 4326) 823s > 823s > tmp = tempfile(fileext = ".tif") 823s > write_stars(st, tmp) 823s > 823s > (red <- setNames(read_stars(tmp, RasterIO = list(nXOff = 1, nYOff = 1, nXsize = 10, nYSize = 12, 823s + nBufXSize = 2, nBufYSize = 2)), "foo")) 823s stars object with 3 dimensions and 1 attribute 823s attribute(s): 823s Min. 1st Qu. Median Mean 3rd Qu. Max. 823s foo 33 199.25 365.5 365.5 531.75 698 823s dimension(s): 823s from to offset delta refsys point x/y 823s x 1 2 0 5 WGS 84 FALSE [x] 823s y 1 2 12 -6 WGS 84 FALSE [y] 823s band 1 6 NA NA NA NA 823s > 823s > sfc = st_set_crs(st_as_sfc(red, as_points = FALSE), st_crs(st)) 823s > (a = aggregate(st, st_sf(a = 1, geom = sfc), mean)) 823s stars object with 2 dimensions and 1 attribute 823s attribute(s): 823s Min. 1st Qu. Median Mean 3rd Qu. Max. 823s A1 28 194.25 360.5 360.5 526.75 693 823s dimension(s): 823s from to offset delta refsys point 823s geom 1 4 NA NA WGS 84 FALSE 823s t 1 6 2019-02-20 1 days Date FALSE 823s values 823s geom POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0... 823s t NULL 823s > (a = aggregate(st, sfc, mean)) 823s stars object with 2 dimensions and 1 attribute 823s attribute(s): 823s Min. 1st Qu. Median Mean 3rd Qu. Max. 823s A1 28 194.25 360.5 360.5 526.75 693 823s dimension(s): 823s from to offset delta refsys point 823s geometry 1 4 NA NA WGS 84 FALSE 823s t 1 6 2019-02-20 1 days Date FALSE 823s values 823s geometry POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0... 823s t NULL 823s > 823s > tm0 = as.Date("2019-02-19") + -1:8 823s > (a = aggregate(st, tm0, mean, na.rm = TRUE)) 823s stars object with 3 dimensions and 1 attribute 823s attribute(s): 823s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 823s A1 1 180.75 360.5 360.5 540.25 720 480 823s dimension(s): 823s from to offset delta refsys point x/y 823s time 1 10 2019-02-18 1 days Date NA 823s x 1 10 0 1 WGS 84 FALSE [x] 823s y 1 12 12 -1 WGS 84 FALSE [y] 823s > (a = aggregate(st, "days", mean, na.rm = TRUE)) 823s stars object with 3 dimensions and 1 attribute 823s attribute(s): 823s Min. 1st Qu. Median Mean 3rd Qu. Max. 823s A1 1 180.75 360.5 360.5 540.25 720 823s dimension(s): 823s from to offset delta refsys point x/y 823s time 1 6 2019-02-20 1 days Date NA 823s x 1 10 0 1 WGS 84 FALSE [x] 823s y 1 12 12 -1 WGS 84 FALSE [y] 823s > yd = function(x) as.POSIXlt(x)$yday 823s > (a = aggregate(st, yd, mean, na.rm = TRUE)) 823s stars object with 3 dimensions and 1 attribute 823s attribute(s): 823s Min. 1st Qu. Median Mean 3rd Qu. Max. 823s A1 1 180.75 360.5 360.5 540.25 720 823s dimension(s): 823s from to offset delta refsys point values x/y 823s geometry 1 6 NA NA NA NA 50,...,55 823s x 1 10 0 1 WGS 84 FALSE NULL [x] 823s y 1 12 12 -1 WGS 84 FALSE NULL [y] 823s > 823s > # with "by" geometry not overlapping x 823s > pt = st_point(c(-10,-10)) 823s > (sfc = c(sfc, st_sfc(pt, crs = st_crs(sfc)))) 823s Geometry set for 5 features 823s Geometry type: GEOMETRY 823s Dimension: XY 823s Bounding box: xmin: -10 ymin: -10 xmax: 10 ymax: 12 823s Geodetic CRS: WGS 84 823s POLYGON ((0 12, 5 12, 5 6, 0 6, 0 12)) 823s POLYGON ((5 12, 10 12, 10 6, 5 6, 5 12)) 823s POLYGON ((0 6, 5 6, 5 0, 0 0, 0 6)) 823s POLYGON ((5 6, 10 6, 10 0, 5 0, 5 6)) 823s POINT (-10 -10) 823s > (a = aggregate(st, sfc, mean)) 823s stars object with 2 dimensions and 1 attribute 823s attribute(s): 823s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 823s A1 28 194.25 360.5 360.5 526.75 693 6 823s dimension(s): 823s from to offset delta refsys point 823s geometry 1 5 NA NA WGS 84 FALSE 823s t 1 6 2019-02-20 1 days Date FALSE 823s values 823s geometry POLYGON ((0 12, 5 12, 5 6...,...,POINT (-10 -10) 823s t NULL 823s > (a = aggregate(st, st, mean)) 823s stars object with 2 dimensions and 1 attribute 823s attribute(s): 823s Min. 1st Qu. Median Mean 3rd Qu. Max. 823s A1 1 180.75 360.5 360.5 540.25 720 823s dimension(s): 823s from to offset delta refsys point 823s geometry 1 120 NA NA WGS 84 FALSE 823s t 1 6 2019-02-20 1 days Date FALSE 823s values 823s geometry POLYGON ((0 12, 1 12, 1 1...,...,POLYGON ((9 1, 10 1, 10 0... 823s t NULL 823s > 823s BEGIN TEST align.R 823s 823s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 823s Copyright (C) 2024 The R Foundation for Statistical Computing 823s Platform: aarch64-unknown-linux-gnu 823s 823s R is free software and comes with ABSOLUTELY NO WARRANTY. 823s You are welcome to redistribute it under certain conditions. 823s Type 'license()' or 'licence()' for distribution details. 823s 823s R is a collaborative project with many contributors. 823s Type 'contributors()' for more information and 823s 'citation()' on how to cite R or R packages in publications. 823s 823s Type 'demo()' for some demos, 'help()' for on-line help, or 823s 'help.start()' for an HTML browser interface to help. 823s Type 'q()' to quit R. 823s 823s > suppressPackageStartupMessages(library(stars)) 824s > set.seed(1331) 824s > st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1) 824s Geometry set for 1 feature 824s Geometry type: POINT 824s Dimension: XY 824s Bounding box: xmin: 291430.8 ymin: 9111430 xmax: 291430.8 ymax: 9111430 824s POINT (291430.8 9111430) 824s Projected CRS: SIRGAS 2000 / UTM zone 25S 824s > b = st_buffer(st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1), 335) 824s > bba = stars:::st_align(st_bbox(b), st_dimensions(L7_ETMs)) 824s > 824s > plot(L7_ETMs[,,,1], extent = st_buffer(b, 20), reset = FALSE, key.pos = NULL) 824s > plot(b, add = TRUE, col = NA, border = 'red') 824s > plot(st_as_sfc(st_bbox(b)), col = NA, border = 'red', add = TRUE) 824s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE) 824s > st_bbox(b) 824s xmin ymin xmax ymax 824s 297116.8 9119404.1 297786.8 9120074.1 824s > bba 824s xmin ymin xmax ymax 824s 297098.3 9119392.8 297810.8 9120076.8 824s > 824s > plot(L7_ETMs[,,,1], reset = FALSE, key.pos = NULL) 824s > plot(b, col = 'red', add = TRUE) 824s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE) 824s > 824s > b0 = st_buffer(b, -100) 824s > L7 = st_as_stars(L7_ETMs)[b0][,,,1] |> st_normalize() 824s > bbb = stars:::st_align(st_bbox(b), st_dimensions(L7)) 824s > plot(L7, extent = st_buffer(b, 120), reset = FALSE, key.pos = NULL) 824s > plot(st_as_sfc(st_bbox(L7)), col = NA, border = 'black', add = TRUE) 824s > plot(st_as_sfc(bbb), col = NA, border = 'blue', add = TRUE) 824s > plot(b, col = NA, border = 'red', add = TRUE) 824s > 824s > all.equal(bbb, bba) 824s [1] TRUE 824s > 824s BEGIN TEST area.R 824s 824s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 824s Copyright (C) 2024 The R Foundation for Statistical Computing 824s Platform: aarch64-unknown-linux-gnu 824s 824s R is free software and comes with ABSOLUTELY NO WARRANTY. 824s You are welcome to redistribute it under certain conditions. 824s Type 'license()' or 'licence()' for distribution details. 824s 824s R is a collaborative project with many contributors. 824s Type 'contributors()' for more information and 824s 'citation()' on how to cite R or R packages in publications. 824s 824s Type 'demo()' for some demos, 'help()' for on-line help, or 824s 'help.start()' for an HTML browser interface to help. 824s Type 'q()' to quit R. 824s 824s > suppressPackageStartupMessages(library(stars)) 825s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 825s > x = read_stars(tif) 825s > (a = st_area(x[,1:5,1:5])) 825s stars object with 2 dimensions and 1 attribute 825s attribute(s): 825s Min. 1st Qu. Median Mean 3rd Qu. Max. 825s area [m^2] 812.25 812.25 812.25 812.25 812.25 812.25 825s dimension(s): 825s from to offset delta refsys point x/y 825s x 1 5 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 825s y 1 5 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 825s > 825s > m = matrix(1:20, nrow = 5, ncol = 4) 825s > x = c(0, 0.5, 1, 2, 4, 5) # 6 numbers: boundaries! 825s > y = c(0.3, 0.5, 1, 2, 2.2) # 5 numbers: boundaries! 825s > (r = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y))) 825s stars object with Missing coordinate reference system: assuming Cartesian coordinates 825s 2 dimensions and 1 attribute 825s attribute(s): 825s Min. 1st Qu. Median Mean 3rd Qu. Max. 825s m 1 5.75 10.5 10.5 15.25 20 825s dimension(s): 825s from to point values x/y 825s x 1 5 FALSE [0,0.5),...,[4,5) [x] 825s y 1 4 FALSE [0.3,0.5),...,[2,2.2) [y] 825s > # image(r, axes = TRUE, col = grey((1:20)/20)) 825s > (a = st_area(r)) 825s stars object with 2 dimensions and 1 attribute 825s attribute(s): 825s Min. 1st Qu. Median Mean 3rd Qu. Max. 825s area 0.1 0.2 0.325 0.475 0.5 2 825s dimension(s): 825s from to point values x/y 825s x 1 5 FALSE [0,0.5),...,[4,5) [x] 825s y 1 4 FALSE [0.3,0.5),...,[2,2.2) [y] 825s > #plot(a, axes = TRUE) 825s > 825s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") 825s > if (s5p != "") { 825s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 825s + curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) 825s + if (inherits(nit.c[[1]], "units")) 825s + nit.c[[1]] = units::drop_units(nit.c[[1]]) 825s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA 825s + st_crs(nit.c) = 4326 825s + print((a <- st_area(nit.c[,1:5,1:5]))) 825s + # plot(a, axes = TRUE, border = NA) 825s + } 825s > 825s BEGIN TEST crop.R 825s 825s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 825s Copyright (C) 2024 The R Foundation for Statistical Computing 825s Platform: aarch64-unknown-linux-gnu 825s 825s R is free software and comes with ABSOLUTELY NO WARRANTY. 825s You are welcome to redistribute it under certain conditions. 825s Type 'license()' or 'licence()' for distribution details. 825s 825s R is a collaborative project with many contributors. 825s Type 'contributors()' for more information and 825s 'citation()' on how to cite R or R packages in publications. 825s 825s Type 'demo()' for some demos, 'help()' for on-line help, or 825s 'help.start()' for an HTML browser interface to help. 825s Type 'q()' to quit R. 825s 825s > suppressPackageStartupMessages(library(stars)) 826s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 826s > x = read_stars(tif) 826s > xy = structure(list(x = c(293253.999046018, 296400.196497684), y = c(9113801.64775462, 826s + 9111328.49619133)), .Names = c("x", "y")) 826s > pts = st_as_sf(data.frame(do.call(cbind, xy)), coords = c("x", "y"), crs = st_crs(x)) 826s > image(x, axes = TRUE) 826s > plot(st_as_sfc(st_bbox(pts)), col = NA, add = TRUE) 826s > 826s > bb = st_bbox(pts) 826s > (xx = x[bb]) 826s stars object with 3 dimensions and 1 attribute 826s attribute(s): 826s Min. 1st Qu. Median Mean 3rd Qu. Max. 826s L7_ETMs.tif 3 56 73 70.87303 89 255 826s dimension(s): 826s from to offset delta refsys point x/y 826s x 158 268 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 826s y 245 331 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 826s band 1 6 NA NA NA NA 826s > image(xx) 826s > plot(st_as_sfc(bb), add = TRUE, col = NA) 826s > st_contains(st_as_sfc(st_bbox(xx)), st_as_sfc(st_bbox(pts))) 826s Sparse geometry binary predicate list of length 1, where the predicate 826s was `contains' 826s 1: 1 826s > 826s > image(x) 826s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085)) 826s > buf = st_buffer(st_sfc(pt, crs = st_crs(x)), 1500) 826s > plot(buf, add = TRUE) 826s > 826s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])), 826s + crs = st_crs(x)) 826s > image(x[buf]) 826s > plot(buf, add = TRUE, col = NA) 826s > image(x[buf,crop=FALSE]) 827s > plot(buf, add = TRUE, col = NA) 827s > 827s > plot(x, rgb = 1:3) 827s > 827s > # #638: 827s > l = st_as_stars(L7_ETMs) 827s > st_bbox(l) |> st_as_sfc() -> bb 827s > (bb + 1e6) |> st_set_crs(st_crs(l)) -> b 827s > st_crop(l, b) 828s stars object with 3 dimensions and 1 attribute 828s attribute(s): 828s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 828s L7_ETMs NA NA NA NaN NA NA 737088 828s dimension(s): 828s from to offset delta refsys point x/y 828s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 828s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 828s band 1 6 NA NA NA NA 828s > st_intersects(b, st_as_sfc(st_bbox(l))) |> as.matrix() 828s [,1] 828s [1,] FALSE 828s > (bb - 1e6) |> st_set_crs(st_crs(l)) -> b 828s > st_crop(l, b) 828s Warning message: 828s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap 829s stars object with 3 dimensions and 1 attribute 829s attribute(s): 829s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 829s L7_ETMs NA NA NA NaN NA NA 737088 829s dimension(s): 829s from to offset delta refsys point x/y 829s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 829s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 829s band 1 6 NA NA NA NA 829s > 829s Warning message: 829s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap 829s BEGIN TEST curvilinear.R 829s 829s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 829s Copyright (C) 2024 The R Foundation for Statistical Computing 829s Platform: aarch64-unknown-linux-gnu 829s 829s R is free software and comes with ABSOLUTELY NO WARRANTY. 829s You are welcome to redistribute it under certain conditions. 829s Type 'license()' or 'licence()' for distribution details. 829s 829s R is a collaborative project with many contributors. 829s Type 'contributors()' for more information and 829s 'citation()' on how to cite R or R packages in publications. 829s 829s Type 'demo()' for some demos, 'help()' for on-line help, or 829s 'help.start()' for an HTML browser interface to help. 829s Type 'q()' to quit R. 829s 829s > suppressPackageStartupMessages(library(stars)) 829s > 829s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") 829s > if (s5p != "") { 829s + 829s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") 829s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") 829s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") 829s + lat = read_stars(lat_ds) 829s + lon = read_stars(lon_ds) 829s + nit = read_stars(nit_ds) 829s + nit[[1]][nit[[1]] > 9e+36] = NA 829s + 829s + ll = setNames(c(lon, lat), c("x", "y")) 829s + nit.c0 = st_as_stars(nit, curvilinear = ll) 829s + 829s + # more direct method: 829s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 829s + curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) 829s + if (inherits(nit.c[[1]], "units")) 829s + nit.c[[1]] = units::drop_units(nit.c[[1]]) 829s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA 829s + all.equal(nit.c0, nit.c) 829s + st_crs(nit.c) = 4326 829s + print(nit.c) 829s + 829s + if (FALSE && capabilities()["png"]) { 829s + png("nit1.png", 800, 800) 829s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) 829s + maps::map('world', add = TRUE, col = 'red') 829s + dev.off() 829s + 829s + png("nit2.png", 800, 800) 829s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) 829s + maps::map('world', add = TRUE, col = 'red') 829s + dev.off() 829s + 829s + nit.c = stars:::st_downsample(nit.c, 8) 829s + print(nit.c) 829s + 829s + png("nit3.png", 800, 800) 829s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) 829s + maps::map('world', add = TRUE, col = 'red') 829s + dev.off() 829s + 829s + png("nit4.png", 800, 800) 829s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) 829s + maps::map('world', add = TRUE, col = 'red') 829s + dev.off() 829s + } 829s + 829s + } 829s > 829s BEGIN TEST datasets.R 829s 829s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 829s Copyright (C) 2024 The R Foundation for Statistical Computing 829s Platform: aarch64-unknown-linux-gnu 829s 829s R is free software and comes with ABSOLUTELY NO WARRANTY. 829s You are welcome to redistribute it under certain conditions. 829s Type 'license()' or 'licence()' for distribution details. 829s 829s R is a collaborative project with many contributors. 829s Type 'contributors()' for more information and 829s 'citation()' on how to cite R or R packages in publications. 829s 829s Type 'demo()' for some demos, 'help()' for on-line help, or 829s 'help.start()' for an HTML browser interface to help. 829s Type 'q()' to quit R. 829s 830s > suppressPackageStartupMessages(library(stars)) 830s > bcsd_obs 830s stars_proxy object with 2 attributes in 2 file(s): 830s $foo 830s [1] "[...]/bcsd_obs_1999.nc:pr" 830s 830s $bar 830s [1] "[...]/bcsd_obs_1999.nc:tas" 830s 830s dimension(s): 830s from to offset delta refsys values x/y 830s x 1 81 -85 0.125 NA NULL [x] 830s y 1 33 37.12 -0.125 NA NULL [y] 830s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 830s > L7_ETMs 830s stars_proxy object with 1 attribute in 1 file(s): 830s $L7_ETMs 830s [1] "[...]/L7_ETMs.tif" 830s 830s dimension(s): 830s from to offset delta refsys point x/y 830s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 830s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 830s band 1 6 NA NA NA NA 830s > if (require(starsdata, quietly = TRUE)) { 830s + print(stars_sentinel2) 830s + } 830s > 830s BEGIN TEST dimensions.R 830s 830s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 830s Copyright (C) 2024 The R Foundation for Statistical Computing 830s Platform: aarch64-unknown-linux-gnu 830s 830s R is free software and comes with ABSOLUTELY NO WARRANTY. 830s You are welcome to redistribute it under certain conditions. 830s Type 'license()' or 'licence()' for distribution details. 830s 830s R is a collaborative project with many contributors. 830s Type 'contributors()' for more information and 830s 'citation()' on how to cite R or R packages in publications. 830s 830s Type 'demo()' for some demos, 'help()' for on-line help, or 830s 'help.start()' for an HTML browser interface to help. 830s Type 'q()' to quit R. 830s 830s > # https://github.com/r-spatial/stars/issues/295 830s > suppressPackageStartupMessages(library(stars)) 831s > raw <- read_stars(system.file("nc/bcsd_obs_1999.nc", package = "stars")) 831s pr, tas, 831s > foo <- function(x, idx) stats::lowess(idx, x)$y 831s > 831s > timeline <- st_get_dimension_values(raw, "time") 831s > smooth = st_apply(raw, 831s + MARGIN = c("x", "y"), 831s + FUN = foo, 831s + idx = st_get_dimension_values(raw, "time") 831s + ) 832s > 832s > st_set_dimensions(smooth, 832s + which = "foo", 832s + values = st_get_dimension_values(raw, "time"), 832s + names = "time" 832s + ) 832s stars object with 3 dimensions and 2 attributes 832s attribute(s): 832s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 832s pr 16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116 832s tas -2.354958 9.632157 15.32671 14.61650 19.99331 24.7976 7116 832s dimension(s): 832s from to offset delta refsys values x/y 832s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 832s x 1 81 -85 0.125 NA NULL [x] 832s y 1 33 37.12 -0.125 NA NULL [y] 832s > 832s > raw %>% 832s + st_apply(MARGIN = c("x", "y"), FUN = foo, idx = timeline) %>% 832s + st_set_dimensions("foo", st_dimensions(raw)["time"]) 832s stars object with 3 dimensions and 2 attributes 832s attribute(s): 832s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 832s pr 16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116 832s tas -2.354958 9.632157 15.32671 14.61650 19.99331 24.7976 7116 832s dimension(s): 832s from to offset delta refsys values x/y 832s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 832s x 1 81 -85 0.125 NA NULL [x] 832s y 1 33 37.12 -0.125 NA NULL [y] 832s > 832s BEGIN TEST downsample.R 832s 832s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 832s Copyright (C) 2024 The R Foundation for Statistical Computing 832s Platform: aarch64-unknown-linux-gnu 832s 832s R is free software and comes with ABSOLUTELY NO WARRANTY. 832s You are welcome to redistribute it under certain conditions. 832s Type 'license()' or 'licence()' for distribution details. 832s 832s R is a collaborative project with many contributors. 832s Type 'contributors()' for more information and 832s 'citation()' on how to cite R or R packages in publications. 832s 832s Type 'demo()' for some demos, 'help()' for on-line help, or 832s 'help.start()' for an HTML browser interface to help. 832s Type 'q()' to quit R. 832s 832s > suppressPackageStartupMessages(library(stars)) 833s > m = matrix(1:121, 11, 11) 833s > m 833s [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] 833s [1,] 1 12 23 34 45 56 67 78 89 100 111 833s [2,] 2 13 24 35 46 57 68 79 90 101 112 833s [3,] 3 14 25 36 47 58 69 80 91 102 113 833s [4,] 4 15 26 37 48 59 70 81 92 103 114 833s [5,] 5 16 27 38 49 60 71 82 93 104 115 833s [6,] 6 17 28 39 50 61 72 83 94 105 116 833s [7,] 7 18 29 40 51 62 73 84 95 106 117 833s [8,] 8 19 30 41 52 63 74 85 96 107 118 833s [9,] 9 20 31 42 53 64 75 86 97 108 119 833s [10,] 10 21 32 43 54 65 76 87 98 109 120 833s [11,] 11 22 33 44 55 66 77 88 99 110 121 833s > s = st_as_stars(m) 833s > st_downsample(s, 1) 833s stars object with 2 dimensions and 1 attribute 833s attribute(s): 833s Min. 1st Qu. Median Mean 3rd Qu. Max. 833s A1 1 28.5 61 61 93.5 121 833s dimension(s): 833s from to offset delta point x/y 833s X1 1 6 0 2 FALSE [x] 833s X2 1 6 0 2 FALSE [y] 833s > st_downsample(s, 1)[[1]] 833s [,1] [,2] [,3] [,4] [,5] [,6] 833s [1,] 1 23 45 67 89 111 833s [2,] 3 25 47 69 91 113 833s [3,] 5 27 49 71 93 115 833s [4,] 7 29 51 73 95 117 833s [5,] 9 31 53 75 97 119 833s [6,] 11 33 55 77 99 121 833s > st_downsample(s, 1, offset = 1) 833s stars object with 2 dimensions and 1 attribute 833s attribute(s): 833s Min. 1st Qu. Median Mean 3rd Qu. Max. 833s A1 13 37 61 61 85 109 833s dimension(s): 833s from to offset delta point x/y 833s X1 1 5 1 2 FALSE [x] 833s X2 1 5 1 2 FALSE [y] 833s > st_downsample(s, 1, offset = 1)[[1]] 833s [,1] [,2] [,3] [,4] [,5] 833s [1,] 13 35 57 79 101 833s [2,] 15 37 59 81 103 833s [3,] 17 39 61 83 105 833s [4,] 19 41 63 85 107 833s [5,] 21 43 65 87 109 833s > st_downsample(s, 1, FUN = mean) 833s stars object with 2 dimensions and 1 attribute 833s attribute(s): 833s Min. 1st Qu. Median Mean 3rd Qu. Max. 833s A1 7 31 55 55 79 103 833s dimension(s): 833s from to offset delta point x/y 833s X1 1 5 0 2 FALSE [x] 833s X2 1 5 0 2 FALSE [y] 833s > st_downsample(s, 1, FUN = mean)[[1]] 833s [,1] [,2] [,3] [,4] [,5] 833s [1,] 7 29 51 73 95 833s [2,] 9 31 53 75 97 833s [3,] 11 33 55 77 99 833s [4,] 13 35 57 79 101 833s [5,] 15 37 59 81 103 833s > st_downsample(s, 1, offset = 1, FUN = mean) 833s stars object with 2 dimensions and 1 attribute 833s attribute(s): 833s Min. 1st Qu. Median Mean 3rd Qu. Max. 833s A1 19 43 67 67 91 115 833s dimension(s): 833s from to offset delta point x/y 833s X1 1 5 1 2 FALSE [x] 833s X2 1 5 1 2 FALSE [y] 833s > st_downsample(s, 1, offset = c(0,1), FUN = mean)[[1]] 833s [,1] [,2] [,3] [,4] [,5] 833s [1,] 18 40 62 84 106 833s [2,] 20 42 64 86 108 833s [3,] 22 44 66 88 110 833s [4,] 24 46 68 90 112 833s [5,] 26 48 70 92 114 833s > st_downsample(s, 1, offset = c(0,1)) 833s stars object with 2 dimensions and 1 attribute 833s attribute(s): 833s Min. 1st Qu. Median Mean 3rd Qu. Max. 833s A1 12 36.5 61 61 85.5 110 833s dimension(s): 833s from to offset delta point x/y 833s X1 1 6 0 2 FALSE [x] 833s X2 1 5 1 2 FALSE [y] 833s > st_downsample(s, 1, offset = c(0,1))[[1]] 833s [,1] [,2] [,3] [,4] [,5] 833s [1,] 12 34 56 78 100 833s [2,] 14 36 58 80 102 833s [3,] 16 38 60 82 104 833s [4,] 18 40 62 84 106 833s [5,] 20 42 64 86 108 833s [6,] 22 44 66 88 110 833s > 833s BEGIN TEST ee.R 833s 833s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 833s Copyright (C) 2024 The R Foundation for Statistical Computing 833s Platform: aarch64-unknown-linux-gnu 833s 833s R is free software and comes with ABSOLUTELY NO WARRANTY. 833s You are welcome to redistribute it under certain conditions. 833s Type 'license()' or 'licence()' for distribution details. 833s 833s R is a collaborative project with many contributors. 833s Type 'contributors()' for more information and 833s 'citation()' on how to cite R or R packages in publications. 833s 833s Type 'demo()' for some demos, 'help()' for on-line help, or 833s 'help.start()' for an HTML browser interface to help. 833s Type 'q()' to quit R. 833s 833s > # show that extract with exact=TRUE equals st_interpolate_aw(), only much faster 833s > options(digits=15) 833s > suppressPackageStartupMessages(library(stars)) 833s > L = st_as_stars(L7_ETMs)[,,,1] 833s > set.seed(123432) 833s > st_bbox(L) |> 833s + st_as_sfc() |> 833s + st_centroid() |> 833s + st_buffer(50) |> 833s + st_sample(10) |> 833s + st_combine() |> 833s + st_convex_hull() -> ch 833s > if (interactive()) { 833s + plot(L, reset = FALSE) 833s + plot(ch, add = TRUE, border = 'red', col = NA) 833s + } 833s > if (FALSE) { 833s + e = st_extract(L, ch)[[1]] 833s + a = aggregate(L, ch, mean)[[1]] 833s + identical(e, a) # same code path 833s + ee = aggregate(L, ch, mean, exact = TRUE)[[1]] 833s + all.equal(e, ee) 833s + aw = suppressWarnings(st_interpolate_aw(L, ch, extensive = FALSE)$V1) 833s + all.equal(as.vector(ee), aw) 833s + ee0 = st_extract(L, ch, exact = TRUE)[[1]] 833s + all.equal(ee0, ee) # ?? 833s + } 833s > 833s BEGIN TEST extract.R 833s 833s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 833s Copyright (C) 2024 The R Foundation for Statistical Computing 833s Platform: aarch64-unknown-linux-gnu 833s 833s R is free software and comes with ABSOLUTELY NO WARRANTY. 833s You are welcome to redistribute it under certain conditions. 833s Type 'license()' or 'licence()' for distribution details. 833s 833s R is a collaborative project with many contributors. 833s Type 'contributors()' for more information and 833s 'citation()' on how to cite R or R packages in publications. 833s 833s Type 'demo()' for some demos, 'help()' for on-line help, or 833s 'help.start()' for an HTML browser interface to help. 833s Type 'q()' to quit R. 833s 834s > # Create 'stars' object 834s > set.seed(1331) 834s > suppressPackageStartupMessages(library(stars)) 834s > volcano = rbind(volcano, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA) # add NA rows 834s > d = st_dimensions(x = 1:ncol(volcano), y = 1:nrow(volcano)) 834s > (r = st_as_stars(t(volcano))) 834s stars object with 2 dimensions and 1 attribute 834s attribute(s): 834s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 834s A1 94 108 124 130.1879 150 195 732 834s dimension(s): 834s from to offset delta point x/y 834s X1 1 61 0 1 FALSE [x] 834s X2 1 99 0 1 FALSE [y] 834s > r = st_set_dimensions(r, 1, offset = 0, delta = 1) 834s > r = st_set_dimensions(r, 2, offset = nrow(volcano), delta = -1) 834s > 834s > # Create points 834s > pnt = st_sample(st_as_sfc(st_bbox(r)), 100) 834s > pnt = st_as_sf(pnt) 834s > 834s > # Extract - 'st_join' 834s > x = st_join(pnt, st_as_sf(r)) 834s > 834s > # Extract - 'st_extract' 834s > y = st_extract(r, pnt) 834s > 834s > # check there are NA's: 834s > any(is.na(x)) 834s [1] TRUE 834s > # Compare 834s > all.equal(x$A1, y[[1]]) 834s [1] TRUE 834s > 834s > ################################################ 834s > if (FALSE) { 834s + 834s + ## tic: segfaults 834s + # check equal results with stars_proxy: 834s + #x = st_extract(stars:::st_as_stars_proxy(r), pnt) 834s + #all.equal(x$A1, y[[1]]) 834s + #all.equal(x, y) 834s + 834s + r = c(r, 2*r, 10*r) 834s + x = st_join(pnt, st_as_sf(r)) 834s + y = st_as_sf(st_extract(r, pnt)) 834s + all.equal(x, y) 834s + 834s + ## tic: segfaults 834s + #x = st_extract(stars:::st_as_stars_proxy(merge(r)), pnt) 834s + #all.equal(st_as_sf(x), y) 834s + 834s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 834s + xp = read_stars(tif, proxy = TRUE) 834s + xm = read_stars(tif, proxy = FALSE) 834s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10) 834s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts) 834s + em = st_extract(xm, pts) 834s + if (utils::packageVersion("sf") >= "0.9-7") { 834s + ep = st_extract(xp, pts) 834s + print(all.equal(ep, em, check.attributes = TRUE)) 834s + } 834s + 834s + # two-attribute objects: 834s + library(stars) 834s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 834s + xp = read_stars(c(tif, tif), proxy = TRUE) 834s + xm = read_stars(c(tif, tif), proxy = FALSE) 834s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10) 834s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts) 834s + em = st_extract(xm, pts) 834s + if (utils::packageVersion("sf") >= "0.9-7") { 834s + ep = st_extract(xp, pts) 834s + print(all.equal(ep, em, check.attributes = TRUE)) 834s + } 834s + 834s + # single-attribute, single raster objects: 834s + tif1 = paste0(tempfile(), ".tif") 834s + write_stars(xm[1,,,1], "x.tif") 834s + xp = read_stars("x.tif", proxy = TRUE) 834s + xm = read_stars("x.tif", proxy = FALSE) 834s + em = st_extract(xm, pts) 834s + if (utils::packageVersion("sf") >= "0.9-7") { 834s + ep = st_extract(xp, pts) 834s + print(all.equal(ep, em, check.attributes = TRUE)) 834s + } 834s + 834s + # multiple-file attributes: 834s + x = c( 834s + "avhrr-only-v2.19810901.nc", 834s + "avhrr-only-v2.19810902.nc", 834s + "avhrr-only-v2.19810903.nc", 834s + "avhrr-only-v2.19810904.nc", 834s + "avhrr-only-v2.19810905.nc", 834s + "avhrr-only-v2.19810906.nc", 834s + "avhrr-only-v2.19810907.nc", 834s + "avhrr-only-v2.19810908.nc", 834s + "avhrr-only-v2.19810909.nc" 834s + ) 834s + file_list = system.file(paste0("netcdf/", x), package = "starsdata") 834s + if (!identical(file_list, "")) { 834s + y = read_stars(file_list, quiet = TRUE) 834s + print(y) 834s + st_crs(y) = "OGC:CRS84" 834s + pts = st_sample(st_as_sfc(st_bbox(y)), 10) 834s + em = st_extract(y, pts) 834s + 834s + (y = read_stars(file_list, quiet = TRUE, proxy = TRUE)) 834s + print(y) 834s + st_crs(y) = "OGC:CRS84" 834s + if (utils::packageVersion("sf") >= "0.9-7") { 834s + ep = st_extract(y, pts) 834s + print(all.equal(em, ep)) 834s + } 834s + } 834s + 834s + # nearest & bilinear comparison: 834s + if (utils::packageVersion("sf") >= "0.9-7") { 834s + set.seed(12331) 834s + s = st_as_stars(matrix(rnorm(16), 4)) 834s + pts = st_sample(st_as_sfc(st_bbox(s)), 10000, type = "regular") 834s + s1 = st_extract(s, pts, bilinear = FALSE) 834s + s2 = st_extract(s, pts, bilinear = TRUE) 834s + s1$s2 = s2[[1]] 834s + names(s1)[c(1,3)] = c("nearest", "bilinear") 834s + print(s1[sample(10000, 5),]) 834s + } 834s + } 834s > 834s BEGIN TEST gridtypes.R 834s 834s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 834s Copyright (C) 2024 The R Foundation for Statistical Computing 834s Platform: aarch64-unknown-linux-gnu 834s 834s R is free software and comes with ABSOLUTELY NO WARRANTY. 834s You are welcome to redistribute it under certain conditions. 834s Type 'license()' or 'licence()' for distribution details. 834s 834s R is a collaborative project with many contributors. 834s Type 'contributors()' for more information and 834s 'citation()' on how to cite R or R packages in publications. 834s 834s Type 'demo()' for some demos, 'help()' for on-line help, or 834s 'help.start()' for an HTML browser interface to help. 834s Type 'q()' to quit R. 834s 834s > suppressPackageStartupMessages(library(stars)) 835s > 835s > # regular, but not spatial: 835s > d = st_dimensions(a = 1:3, b = 1:3, band = c("foo", "bar")) 835s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 835s stars object with 3 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s X 1 5.25 9.5 9.5 13.75 18 835s dimension(s): 835s from to offset delta point values 835s a 1 3 1 1 FALSE NULL 835s b 1 3 1 1 FALSE NULL 835s band 1 2 NA NA FALSE foo, bar 835s > as.data.frame(st, add_max=FALSE)[1:4,] 835s a b band X 835s 1 1 1 foo 1 835s 2 2 1 foo 2 835s 3 3 1 foo 3 835s 4 1 2 foo 4 835s > try(x <- st_bbox(st)) # error 835s > 835s > # regular, geotransform: 835s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 835s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 835s stars object with 3 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s X 1 5.25 9.5 9.5 13.75 18 835s dimension(s): 835s from to offset delta point values x/y 835s x 1 3 1 1 FALSE NULL [x] 835s y 1 3 1 1 FALSE NULL [y] 835s band 1 2 NA NA FALSE foo, bar 835s > as.data.frame(st, add_max=FALSE)[1:4,] 835s x y band X 835s 1 1.5 1.5 foo 1 835s 2 2.5 1.5 foo 2 835s 3 3.5 1.5 foo 3 835s 4 1.5 2.5 foo 4 835s > as.data.frame(st, add_max=TRUE)[1:4,] 835s x y band x_max y_max X 835s 1 1 1 foo 2 2 1 835s 2 2 1 foo 3 2 2 835s 3 3 1 foo 4 2 3 835s 4 1 2 foo 2 3 4 835s > st_bbox(st) 835s xmin ymin xmax ymax 835s 1 1 4 4 835s > 835s > # rectilinear with offset given: 835s > xd = c(1, 2, 4) 835s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 835s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 835s stars object with 3 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s X 1 5.25 9.5 9.5 13.75 18 835s dimension(s): 835s from to offset delta point values x/y 835s x 1 3 NA NA FALSE [1,2), [2,4), [4,6)Error in st_bbox.dimensions(st_dimensions(obj), ...) : 835s dimensions table does not have x & y, nor an sfc dimension 835s [x] 835s y 1 3 1 1 FALSE NULL [y] 835s band 1 2 NA NA FALSE foo, bar 835s > as.data.frame(st, add_max=FALSE)[1:4,] 835s x y band X 835s 1 1.5 1.5 foo 1 835s 2 3.0 1.5 foo 2 835s 3 5.0 1.5 foo 3 835s 4 1.5 2.5 foo 4 835s > as.data.frame(st, add_max=TRUE)[1:4,] 835s x y band x_max y_max X 835s 1 1 1 foo 2 2 1 835s 2 2 1 foo 4 2 2 835s 3 4 1 foo 6 2 3 835s 4 1 2 foo 2 3 4 835s > st_bbox(st) 835s xmin ymin xmax ymax 835s 1 1 6 4 835s > 835s > # rectilinear with midpoints given: 835s > xd = c(1, 2, 4) 835s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE) 835s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 835s stars object with 3 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s X 1 5.25 9.5 9.5 13.75 18 835s dimension(s): 835s from to offset delta point values x/y 835s x 1 3 NA NA FALSE [0.5,1.5), [1.5,3.0), [3.0,5.0) [x] 835s y 1 3 0.5 1 FALSE NULL [y] 835s band 1 2 NA NA FALSE foo, bar 835s > as.data.frame(st, add_max=FALSE)[1:4,] 835s x y band X 835s 1 1.00 1 foo 1 835s 2 2.25 1 foo 2 835s 3 4.00 1 foo 3 835s 4 1.00 2 foo 4 835s > as.data.frame(st, add_max=TRUE)[1:4,] 835s x y band x_max y_max X 835s 1 0.5 0.5 foo 1.5 1.5 1 835s 2 1.5 0.5 foo 3.0 1.5 2 835s 3 3.0 0.5 foo 5.0 1.5 3 835s 4 0.5 1.5 foo 1.5 2.5 4 835s > st_bbox(st) 835s xmin ymin xmax ymax 835s 0.5 0.5 5.0 3.5 835s > 835s > # rectilinear with midpoints given, point support 835s > xd = c(1, 2, 4) 835s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE, point = TRUE) 835s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 835s stars object with 3 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s X 1 5.25 9.5 9.5 13.75 18 835s dimension(s): 835s from to offset delta point values x/y 835s x 1 3 NA NA TRUE 1, 2, 4 [x] 835s y 1 3 0.5 1 TRUE NULL [y] 835s band 1 2 NA NA TRUE foo, bar 835s > as.data.frame(st, add_max=FALSE)[1:4,] 835s x y band X 835s 1 1 1 foo 1 835s 2 2 1 foo 2 835s 3 4 1 foo 3 835s 4 1 2 foo 4 835s > as.data.frame(st, add_max=TRUE)[1:4,] 835s x y band x_max y_max X 835s 1 1 0.5 foo 1 1.5 1 835s 2 2 0.5 foo 2 1.5 2 835s 3 4 0.5 foo 4 1.5 3 835s 4 1 1.5 foo 1 2.5 4 835s > st_bbox(st) 835s xmin ymin xmax ymax 835s 1.0 0.5 4.0 3.5 835s > 835s > # rectilinear with start/end given: 835s > #xd = stars:::make_intervals(start = c(1,2,4), end = c(2, 4, 8)) 835s > xd = c(1, 2, 4, 8) # one more than dim of the data array 835s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 835s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 835s stars object with 3 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s X 1 5.25 9.5 9.5 13.75 18 835s dimension(s): 835s from to offset delta point values x/y 835s x 1 3 NA NA FALSE [1,2), [2,4), [4,8) [x] 835s y 1 3 1 1 FALSE NULL [y] 835s band 1 2 NA NA FALSE foo, bar 835s > as.data.frame(st, add_max=FALSE)[1:4,] 835s x y band X 835s 1 1.5 1.5 foo 1 835s 2 3.0 1.5 foo 2 835s 3 6.0 1.5 foo 3 835s 4 1.5 2.5 foo 4 835s > as.data.frame(st, add_max=TRUE)[1:4,] 835s x y band x_max y_max X 835s 1 1 1 foo 2 2 1 835s 2 2 1 foo 4 2 2 835s 3 4 1 foo 8 2 3 835s 4 1 2 foo 2 3 4 835s > st_bbox(st) 835s xmin ymin xmax ymax 835s 1 1 8 4 835s > 835s > # with sfc: 835s > sfc = st_sfc(st_point(0:1), st_point(2:1), st_point(4:3)) 835s > d = st_dimensions(x = sfc, y = 1:3, band = c("foo", "bar")) 835s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 835s stars object with 3 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s X 1 5.25 9.5 9.5 13.75 18 835s dimension(s): 835s from to offset delta point values 835s x 1 3 NA NA TRUE POINT (0 1),...,POINT (4 3) 835s y 1 3 1 1 FALSE NULL 835s band 1 2 NA NA FALSE foo, bar 835s > as.data.frame(st, add_max=FALSE)[1:4,] 835s x y band X 835s 1 POINT (0 1) 1 foo 1 835s 2 POINT (2 1) 1 foo 2 835s 3 POINT (4 3) 1 foo 3 835s 4 POINT (0 1) 2 foo 4 835s > st_as_sf(st, long = TRUE)[1:4,] 835s Simple feature collection with 4 features and 3 fields 835s Geometry type: POINT 835s Dimension: XY 835s Bounding box: xmin: 0 ymin: 1 xmax: 4 ymax: 3 835s CRS: NA 835s y band X x 835s 1 1 foo 1 POINT (0 1) 835s 2 1 foo 2 POINT (2 1) 835s 3 1 foo 3 POINT (4 3) 835s 4 2 foo 4 POINT (0 1) 835s > st_bbox(st) 835s xmin ymin xmax ymax 835s 0 1 4 3 835s > 835s > # rotated/sheared: 835s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), affine = c(0.2, -0.2)) 835s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 835s stars object with 3 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s X 1 5.25 9.5 9.5 13.75 18 835s dimension(s): 835s from to offset delta point values x/y 835s x 1 3 1 1 FALSE NULL [x] 835s y 1 3 1 1 FALSE NULL [y] 835s band 1 2 NA NA FALSE foo, bar 835s sheared raster with parameters: 0.2 -0.2 835s > as.data.frame(st, add_max=FALSE)[1:4,] 835s x y X 835s 1 1.6 1.4 1 835s 2 2.6 1.2 2 835s 3 3.6 1.0 3 835s 4 1.8 2.4 4 835s > try(as.data.frame(st, add_max=TRUE)[1:4,]) # errors 835s > Error in st_coordinates.stars(x, add_max = add_max, center = center, ...) : 835s add_max will not work for rotated/shared rasters 835s st_bbox(st) 835s xmin ymin xmax ymax 835s 1.0 0.4 4.6 4.0 835s > 835s > # curvilinear: 835s > set.seed(13531) 835s > lon = st_as_stars(matrix(signif(runif(9), 2), 3, 3)) 835s > lat = st_as_stars(matrix(signif(runif(9), 2), 3, 3)) 835s > ll = setNames(c(lon, lat), c("lon", "lat")) 835s > d = st_dimensions(lon = 1:3, lat = 1:3) 835s > a = st_as_stars(list(X = array(1:9, c(3,3))), dimensions = d) 835s > (st = st_as_stars(a, curvilinear = ll)) 835s stars object with 2 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s X 1 3 5 5 7 9 835s dimension(s): 835s from to refsys point values x/y 835s lon 1 3 WGS 84 (CRS84) FALSE [3x3] 0.03,...,0.89 [x] 835s lat 1 3 WGS 84 (CRS84) FALSE [3x3] 0.021,...,0.89 [y] 835s curvilinear grid 835s > as.data.frame(st) 835s lon lat X 835s 1 0.89 0.250 1 835s 2 0.64 0.510 2 835s 3 0.30 0.670 3 835s 4 0.69 0.890 4 835s 5 0.47 0.890 5 835s 6 0.26 0.190 6 835s 7 0.57 0.021 7 835s 8 0.27 0.220 8 835s 9 0.03 0.340 9 835s > st_bbox(st) 835s xmin ymin xmax ymax 835s 0.030 0.021 0.890 0.890 835s > 835s > # time regular: 835s > t = as.Date("2019-01-20") + 0:3 835s > d = st_dimensions(t, sfc) 835s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d)) 835s stars object with 2 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s a 1 3.75 6.5 6.5 9.25 12 835s dimension(s): 835s from to offset delta refsys point values 835s X1 1 4 2019-01-20 1 days Date FALSE NULL 835s X2 1 3 NA NA NA TRUE POINT (0 1),...,POINT (4 3) 835s > as.data.frame(st) 835s X1 X2 a 835s 1 2019-01-20 POINT (0 1) 1 835s 2 2019-01-21 POINT (0 1) 2 835s 3 2019-01-22 POINT (0 1) 3 835s 4 2019-01-23 POINT (0 1) 4 835s 5 2019-01-20 POINT (2 1) 5 835s 6 2019-01-21 POINT (2 1) 6 835s 7 2019-01-22 POINT (2 1) 7 835s 8 2019-01-23 POINT (2 1) 8 835s 9 2019-01-20 POINT (4 3) 9 835s 10 2019-01-21 POINT (4 3) 10 835s 11 2019-01-22 POINT (4 3) 11 835s 12 2019-01-23 POINT (4 3) 12 835s > 835s > # time, rectilinear 835s > t = as.Date("2019-01-20") + c(0, 2, 3, 10) 835s > d = st_dimensions(t, sfc) 835s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d)) 835s stars object with 2 dimensions and 1 attribute 835s attribute(s): 835s Min. 1st Qu. Median Mean 3rd Qu. Max. 835s a 1 3.75 6.5 6.5 9.25 12 835s dimension(s): 835s from to refsys point values 835s X1 1 4 Date FALSE 2019-01-20,...,2019-01-30 835s X2 1 3 NA TRUE POINT (0 1),...,POINT (4 3) 835s > as.data.frame(st) 835s X1 X2 a 835s 1 2019-01-20 POINT (0 1) 1 835s 2 2019-01-22 POINT (0 1) 2 835s 3 2019-01-23 POINT (0 1) 3 835s 4 2019-01-30 POINT (0 1) 4 835s 5 2019-01-20 POINT (2 1) 5 835s 6 2019-01-22 POINT (2 1) 6 835s 7 2019-01-23 POINT (2 1) 7 835s 8 2019-01-30 POINT (2 1) 8 835s 9 2019-01-20 POINT (4 3) 9 835s 10 2019-01-22 POINT (4 3) 10 835s 11 2019-01-23 POINT (4 3) 11 835s 12 2019-01-30 POINT (4 3) 12 835s > 835s BEGIN TEST mdim.R 835s 835s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 835s Copyright (C) 2024 The R Foundation for Statistical Computing 835s Platform: aarch64-unknown-linux-gnu 835s 835s R is free software and comes with ABSOLUTELY NO WARRANTY. 835s You are welcome to redistribute it under certain conditions. 835s Type 'license()' or 'licence()' for distribution details. 835s 835s R is a collaborative project with many contributors. 835s Type 'contributors()' for more information and 835s 'citation()' on how to cite R or R packages in publications. 835s 835s Type 'demo()' for some demos, 'help()' for on-line help, or 835s 'help.start()' for an HTML browser interface to help. 835s Type 'q()' to quit R. 835s 835s > Sys.setenv(TZ="") 835s > suppressPackageStartupMessages(library(stars)) 836s > matrix(1:4,2) 836s [,1] [,2] 836s [1,] 1 3 836s [2,] 2 4 836s > m = matrix(1:4,2) 836s > s = st_as_stars(m) 836s > 836s > s = st_set_dimensions(s, st_dimensions(s), xy = NULL) 836s > sfc = st_sfc(st_point(0:1), st_point(3:2)) 836s > s = st_set_dimensions(s, 1, sfc) |> st_set_crs(4326) 836s > tm = as.POSIXct("2023-03-04 12:35") + c(0, 3600) 836s > s = st_set_dimensions(s, 2, tm) 836s > f = tempfile(fileext = ".nc") 836s > write_mdim(s, f, as_float = FALSE) 836s > s2 = read_mdim(f) 836s Warning messages: 836s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 836s GDAL Error 6: SetIndexingVariable() not implemented 836s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 836s GDAL Error 6: SetIndexingVariable() not implemented 836s > #print(s2) 836s > print(all.equal(s, s2, check.attributes = FALSE)) 836s [1] TRUE 836s > print(all.equal(s, s2)) 836s [1] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"input\": 1 string mismatch >" 836s [2] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"wkt\": 1 string mismatch >" 836s [3] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"input\": 1 string mismatch > >" 836s [4] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"wkt\": 1 string mismatch > >" 836s [5] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"offset\": 'tzone' attributes are inconsistent ('' and 'UTC') >" 836s [6] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >" 836s > 836s > st_crs(sfc) = st_crs(s2) 836s > st_crs(s) = st_crs(s2) 836s > tm = as.Date("2023-02-25") + 0:1 836s > sd = st_set_dimensions(s, 2, tm) 836s > print(sd) 836s stars object with 2 dimensions and 1 attribute 836s attribute(s): 836s Min. 1st Qu. Median Mean 3rd Qu. Max. 836s A1 1 1.75 2.5 2.5 3.25 4 836s dimension(s): 836s from to offset delta refsys point values 836s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 836s X2 1 2 2023-02-25 1 days Date FALSE NULL 836s > sd = st_set_dimensions(sd, 1, sfc) 836s > print(sd) 836s stars object with 2 dimensions and 1 attribute 836s attribute(s): 836s Min. 1st Qu. Median Mean 3rd Qu. Max. 836s A1 1 1.75 2.5 2.5 3.25 4 836s dimension(s): 836s from to offset delta refsys point values 836s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 836s X2 1 2 2023-02-25 1 days Date FALSE NULL 836s > f = tempfile(fileext = ".nc") 836s > write_mdim(sd, f) 836s > sd2 = read_mdim(f) 836s Warning messages: 836s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 836s GDAL Error 6: SetIndexingVariable() not implemented 836s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 836s GDAL Error 6: SetIndexingVariable() not implemented 836s > print(sd2) 836s stars object with 2 dimensions and 1 attribute 836s attribute(s): 836s Min. 1st Qu. Median Mean 3rd Qu. Max. 836s A1 1 1.75 2.5 2.5 3.25 4 836s dimension(s): 836s from to offset delta refsys point values 836s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 836s X2 1 2 2023-02-25 1 days Date NA NULL 836s > print(all.equal(sd, sd2, check.attributes = FALSE)) 836s [1] TRUE 836s > print(all.equal(sd, sd2)) 836s [1] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >" 836s > # if (.Platform$OS.type == "unix") { 836s > # print(read_mdim(paste0("/vsizip/", (system.file("zarr/sic_daily_sample.zarr.zip", package = "stars")))) 836s > # } 836s > 836s BEGIN TEST nc.R 836s 836s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 836s Copyright (C) 2024 The R Foundation for Statistical Computing 836s Platform: aarch64-unknown-linux-gnu 836s 836s R is free software and comes with ABSOLUTELY NO WARRANTY. 836s You are welcome to redistribute it under certain conditions. 836s Type 'license()' or 'licence()' for distribution details. 836s 836s R is a collaborative project with many contributors. 836s Type 'contributors()' for more information and 836s 'citation()' on how to cite R or R packages in publications. 836s 836s Type 'demo()' for some demos, 'help()' for on-line help, or 836s 'help.start()' for an HTML browser interface to help. 836s Type 'q()' to quit R. 836s 836s > # examples with the sf::nc polygon dataset NOT ABOUT NETCDF's, see e.g. stars.R netcdf.R 836s > suppressPackageStartupMessages(library(sf)) 837s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf")) 837s > m = st_set_geometry(nc, NULL) 837s > n = as.matrix(m[c("BIR74", "SID74", "NWBIR74", "BIR79", "SID79", "NWBIR79")]) 837s > dim(n) = c(county = 100, var = 3, year = 2) 837s > dimnames(n) = list(county = nc$NAME, var = c("BIR", "SID", "NWBIR"), year = c(1974, 1979)) 837s > suppressPackageStartupMessages(library(stars)) 837s > (st = st_as_stars(pop = n)) 837s stars object with 3 dimensions and 1 attribute 837s attribute(s): 837s Min. 1st Qu. Median Mean 3rd Qu. Max. 837s pop 0 8 538 1657.032 1784 30757 837s dimension(s): 837s from to values 837s county 1 100 Ashe,...,Brunswick 837s var 1 3 BIR , SID , NWBIR 837s year 1 2 1974, 1979 837s > foo <- st %>% st_set_dimensions(1, st_geometry(nc)) # %>% st_set_dimensions(3, c(1974, 1979)) 837s > st %>% st_set_dimensions(1, st_geometry(nc)) %>% st_set_dimensions(names = c("geometries", "var", "year")) 837s stars object with 3 dimensions and 1 attribute 837s attribute(s): 837s Min. 1st Qu. Median Mean 3rd Qu. Max. 837s pop 0 8 538 1657.032 1784 30757 837s dimension(s): 837s from to refsys point 837s geometries 1 100 NAD27 FALSE 837s var 1 3 NA NA 837s year 1 2 NA NA 837s values 837s geometries MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 837s var BIR , SID , NWBIR 837s year 1974, 1979 837s > foo 837s stars object with 3 dimensions and 1 attribute 837s attribute(s): 837s Min. 1st Qu. Median Mean 3rd Qu. Max. 837s pop 0 8 538 1657.032 1784 30757 837s dimension(s): 837s from to refsys point 837s county 1 100 NAD27 FALSE 837s var 1 3 NA NA 837s year 1 2 NA NA 837s values 837s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 837s var BIR , SID , NWBIR 837s year 1974, 1979 837s > st_bbox(foo) 837s xmin ymin xmax ymax 837s -84.32385 33.88199 -75.45698 36.58965 837s > (x = st_as_sf(foo)) 837s Simple feature collection with 100 features and 6 fields 837s Geometry type: MULTIPOLYGON 837s Dimension: XY 837s Bounding box: xmin: -84.32385 ymin: 33.88199 xmax: -75.45698 ymax: 36.58965 837s Geodetic CRS: NAD27 837s First 10 features: 837s BIR.1974 SID.1974 NWBIR.1974 BIR.1979 SID.1979 NWBIR.1979 837s 1 1091 1 10 1364 0 19 837s 2 487 0 10 542 3 12 837s 3 3188 5 208 3616 6 260 837s 4 508 1 123 830 2 145 837s 5 1421 9 1066 1606 3 1197 837s 6 1452 7 954 1838 5 1237 837s 7 286 0 115 350 2 139 837s 8 420 0 254 594 2 371 837s 9 968 4 748 1190 2 844 837s 10 1612 1 160 2038 5 176 837s county 837s 1 MULTIPOLYGON (((-81.47276 3... 837s 2 MULTIPOLYGON (((-81.23989 3... 837s 3 MULTIPOLYGON (((-80.45634 3... 837s 4 MULTIPOLYGON (((-76.00897 3... 837s 5 MULTIPOLYGON (((-77.21767 3... 837s 6 MULTIPOLYGON (((-76.74506 3... 837s 7 MULTIPOLYGON (((-76.00897 3... 837s 8 MULTIPOLYGON (((-76.56251 3... 837s 9 MULTIPOLYGON (((-78.30876 3... 837s 10 MULTIPOLYGON (((-80.02567 3... 837s > frac = function(x) x[2] / x[1] 837s > frac2 = function(x) c(sidsr = x[2] / x[1], nwbr = x[3] / x[1]) 837s > frac2an = function(x) c(x[2] / x[1], x[3] / x[1]) 837s > st_apply(foo, c(1,3), frac) 837s stars object with 2 dimensions and 1 attribute 837s attribute(s): 837s Min. 1st Qu. Median Mean 3rd Qu. Max. 837s frac 0 0.001197874 0.001930504 0.002042241 0.002599348 0.00955414 837s dimension(s): 837s from to refsys point 837s county 1 100 NAD27 FALSE 837s year 1 2 NA NA 837s values 837s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 837s year 1974, 1979 837s > st_apply(foo, c(1,3), frac2) 837s stars object with 3 dimensions and 1 attribute 837s attribute(s): 837s Min. 1st Qu. Median Mean 3rd Qu. Max. 837s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 837s dimension(s): 837s from to refsys point 837s frac2 1 2 NA NA 837s county 1 100 NAD27 FALSE 837s year 1 2 NA NA 837s values 837s frac2 sidsr, nwbr 837s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 837s year 1974, 1979 837s > st_apply(foo, c(1,3), frac2an) 837s stars object with 3 dimensions and 1 attribute 837s attribute(s): 837s Min. 1st Qu. Median Mean 3rd Qu. Max. 837s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 837s dimension(s): 837s from to refsys point 837s frac2an 1 2 NA NA 837s county 1 100 NAD27 FALSE 837s year 1 2 NA NA 837s values 837s frac2an NULL 837s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 837s year 1974, 1979 837s > library(abind) 837s > (x = aperm(st_apply(foo, c(1,3), frac2), c(2,3,1))) 837s stars object with 3 dimensions and 1 attribute 837s attribute(s): 837s Min. 1st Qu. Median Mean 3rd Qu. Max. 837s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 837s dimension(s): 837s from to refsys point 837s county 1 100 NAD27 FALSE 837s year 1 2 NA NA 837s frac2 1 2 NA NA 837s values 837s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 837s year 1974, 1979 837s frac2 sidsr, nwbr 837s > y = aperm(st_apply(foo, c(1,3), frac2), c("county","year","frac2")) 837s > all.equal(st_dimensions(x), st_dimensions(y)) 837s [1] TRUE 837s > 837s > split(foo, 2) 837s stars object with 2 dimensions and 3 attributes 837s attribute(s): 837s Min. 1st Qu. Median Mean 3rd Qu. Max. 837s BIR 248 1176.75 2265 3761.770 4450.75 30757 837s SID 0 2.00 5 7.515 9.00 57 837s NWBIR 1 206.00 742 1201.810 1315.75 11631 837s dimension(s): 837s from to refsys point 837s county 1 100 NAD27 FALSE 837s year 1 2 NA NA 837s values 837s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 837s year 1974, 1979 837s > split(foo, 3) 837s stars object with 2 dimensions and 2 attributes 837s attribute(s): 837s Min. 1st Qu. Median Mean 3rd Qu. Max. 837s 1974 0 8 501.5 1452.367 1580.50 21588 837s 1979 0 9 614.0 1861.697 2040.25 30757 837s dimension(s): 837s from to refsys point 837s county 1 100 NAD27 FALSE 837s var 1 3 NA NA 837s values 837s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 837s var BIR , SID , NWBIR 837s > 837s > st_crs(foo) 837s Coordinate Reference System: 837s User input: NAD27 837s wkt: 837s GEOGCRS["NAD27", 837s DATUM["North American Datum 1927", 837s ELLIPSOID["Clarke 1866",6378206.4,294.978698213898, 837s LENGTHUNIT["metre",1]]], 837s PRIMEM["Greenwich",0, 837s ANGLEUNIT["degree",0.0174532925199433]], 837s CS[ellipsoidal,2], 837s AXIS["geodetic latitude (Lat)",north, 837s ORDER[1], 837s ANGLEUNIT["degree",0.0174532925199433]], 837s AXIS["geodetic longitude (Lon)",east, 837s ORDER[2], 837s ANGLEUNIT["degree",0.0174532925199433]], 837s USAGE[ 837s SCOPE["Geodesy."], 837s AREA["North and central America: Antigua and Barbuda - onshore. Bahamas - onshore plus offshore over internal continental shelf only. Belize - onshore. British Virgin Islands - onshore. Canada onshore - Alberta, British Columbia, Manitoba, New Brunswick, Newfoundland and Labrador, Northwest Territories, Nova Scotia, Nunavut, Ontario, Prince Edward Island, Quebec, Saskatchewan and Yukon - plus offshore east coast. Cuba - onshore and offshore. El Salvador - onshore. Guatemala - onshore. Honduras - onshore. Panama - onshore. Puerto Rico - onshore. Mexico - onshore plus offshore east coast. Nicaragua - onshore. United States (USA) onshore and offshore - Alabama, Alaska, Arizona, Arkansas, California, Colorado, Connecticut, Delaware, Florida, Georgia, Idaho, Illinois, Indiana, Iowa, Kansas, Kentucky, Louisiana, Maine, Maryland, Massachusetts, Michigan, Minnesota, Mississippi, Missouri, Montana, Nebraska, Nevada, New Hampshire, New Jersey, New Mexico, New York, North Carolina, North Dakota, Ohio, Oklahoma, Oregon, Pennsylvania, Rhode Island, South Carolina, South Dakota, Tennessee, Texas, Utah, Vermont, Virginia, Washington, West Virginia, Wisconsin and Wyoming - plus offshore . US Virgin Islands - onshore."], 837s BBOX[7.15,167.65,83.17,-47.74]], 837s ID["EPSG",4267]] 837s > plot(foo) 837s > 837s > # subset vector cube: 837s > foo[nc[1]] 837s stars object with 3 dimensions and 1 attribute 837s attribute(s): 837s Min. 1st Qu. Median Mean 3rd Qu. Max. 837s pop 0 8 538 1657.032 1784 30757 837s dimension(s): 837s from to refsys point 837s county 1 100 NAD27 FALSE 837s var 1 3 NA NA 837s year 1 2 NA NA 837s values 837s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 837s var BIR , SID , NWBIR 837s year 1974, 1979 837s > 838s BEGIN TEST plot.R 838s 838s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 838s Copyright (C) 2024 The R Foundation for Statistical Computing 838s Platform: aarch64-unknown-linux-gnu 838s 838s R is free software and comes with ABSOLUTELY NO WARRANTY. 838s You are welcome to redistribute it under certain conditions. 838s Type 'license()' or 'licence()' for distribution details. 838s 838s R is a collaborative project with many contributors. 838s Type 'contributors()' for more information and 838s 'citation()' on how to cite R or R packages in publications. 838s 838s Type 'demo()' for some demos, 'help()' for on-line help, or 838s 'help.start()' for an HTML browser interface to help. 838s Type 'q()' to quit R. 838s 838s > suppressPackageStartupMessages(library(stars)) 838s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 838s + data(air) # this loads several datasets in .GlobalEnv 838s + dim(air) 838s + d = st_dimensions(station = st_as_sfc(stations), time = dates) 838s + aq = st_as_stars(list(PM10 = air), dimensions = d) 838s + image(aperm(log(aq), 2:1), main = "NA pattern (white) in PM10 station time series") 838s + st_geometry(aq) 838s + } 839s Geometry set for 70 features 839s Geometry type: POINT 839s Dimension: XY 839s Bounding box: xmin: 6.28107 ymin: 47.80847 xmax: 14.78617 ymax: 54.92497 839s Geodetic CRS: +proj=longlat +datum=WGS84 +no_defs 839s First 5 geometries: 839s POINT (9.585911 53.67057) 839s POINT (9.68503 53.52418) 839s POINT (9.791584 54.07312) 839s POINT (13.64701 52.44775) 839s POINT (13.29635 52.65315) 839s > 839s > csv = system.file("tif/ESACCI-LC-Legend.csv", package = "starsdata") 839s > if (csv != "") { 839s + rgb = read.csv(csv, header = TRUE, sep = ";") 839s + luc = read_stars(system.file("tif/LUC3.tif", package = "starsdata")) 839s + plot(luc, rgb = rgb, axes = TRUE, key.pos = NULL) 839s + } 839s > 839s > # https://github.com/r-spatial/stars/issues/233 : 839s > nc = read_sf(system.file("shape/nc.shp", package = "sf")) 839s > output = st_as_stars(st_bbox(nc), nx = 1, ny = 1, values = 1) 839s > plot(output) 840s > 840s Warning message: 840s In plot.stars(output) : 840s breaks="quantile" leads to a single class; maybe try breaks="equal" instead? 840s BEGIN TEST predict.R 840s 840s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 840s Copyright (C) 2024 The R Foundation for Statistical Computing 840s Platform: aarch64-unknown-linux-gnu 840s 840s R is free software and comes with ABSOLUTELY NO WARRANTY. 840s You are welcome to redistribute it under certain conditions. 840s Type 'license()' or 'licence()' for distribution details. 840s 840s R is a collaborative project with many contributors. 840s Type 'contributors()' for more information and 840s 'citation()' on how to cite R or R packages in publications. 840s 840s Type 'demo()' for some demos, 'help()' for on-line help, or 840s 'help.start()' for an HTML browser interface to help. 840s Type 'q()' to quit R. 840s 840s > suppressPackageStartupMessages(library(stars)) 840s > # predict: 840s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 840s > (x = read_stars(tif)) 840s stars object with 3 dimensions and 1 attribute 840s attribute(s): 840s Min. 1st Qu. Median Mean 3rd Qu. Max. 840s L7_ETMs.tif 1 54 69 68.91242 86 255 840s dimension(s): 840s from to offset delta refsys point x/y 840s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 840s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 840s band 1 6 NA NA NA NA 840s > st_crs(x) = st_crs(x) # cleans trailing space 840s > model = lm(x~L7_ETMs.tif, head(as.data.frame(x), 50)) 840s > x = predict(x, model) 841s > 841s > (y = read_stars(tif, proxy = TRUE)) 842s stars_proxy object with 1 attribute in 1 file(s): 842s $L7_ETMs.tif 842s [1] "[...]/L7_ETMs.tif" 842s 842s dimension(s): 842s from to offset delta refsys point x/y 842s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 842s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 842s band 1 6 NA NA NA NA 842s > (yp = predict(y, model)) 842s stars_proxy object with 1 attribute in 1 file(s): 842s $L7_ETMs.tif 842s [1] "[...]/L7_ETMs.tif" 842s 842s dimension(s): 842s from to offset delta refsys point x/y 842s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 842s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 842s band 1 6 NA NA NA NA 842s call_list: 842s [[1]] 842s predict(object = object, model = model) 842s attr(,".Environment") 842s 842s 842s This object has pending lazy operations: dimensions as printed may not reflect this. 842s > all.equal(x, st_as_stars(yp)) 843s [1] TRUE 843s > 843s > yy = st_set_dimensions(y, 3, values = paste0("band", 1:6)) 843s > (y_spl = split(yy, 3)) 843s stars_proxy object with 1 attribute in 1 file(s): 843s $L7_ETMs.tif 843s [1] "[...]/L7_ETMs.tif" 843s 843s dimension(s): 843s from to offset delta refsys point values 843s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 843s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 843s band 1 6 NA NA NA NA band1,...,band6 843s x/y 843s x [x] 843s y [y] 843s band 843s call_list: 843s [[1]] 843s split(x = x, 3) 843s attr(,".Environment") 843s 843s 843s This object has pending lazy operations: dimensions as printed may not reflect this. 843s > as.data.frame(st_as_stars(split(yy, 3)))[1:3,] 843s x y band1 band2 band3 band4 band5 band6 843s 1 288790.5 9120747 69 56 46 79 86 46 843s 2 288819.0 9120747 69 57 49 75 88 49 843s 3 288847.5 9120747 63 52 45 66 75 41 843s > 843s BEGIN TEST proxy.R 843s 843s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 843s Copyright (C) 2024 The R Foundation for Statistical Computing 843s Platform: aarch64-unknown-linux-gnu 843s 843s R is free software and comes with ABSOLUTELY NO WARRANTY. 843s You are welcome to redistribute it under certain conditions. 843s Type 'license()' or 'licence()' for distribution details. 843s 843s R is a collaborative project with many contributors. 843s Type 'contributors()' for more information and 843s 'citation()' on how to cite R or R packages in publications. 843s 843s Type 'demo()' for some demos, 'help()' for on-line help, or 843s 'help.start()' for an HTML browser interface to help. 843s Type 'q()' to quit R. 843s 843s > Sys.setenv(TZ="UTC") 843s > suppressPackageStartupMessages(library(sf)) 843s > suppressPackageStartupMessages(library(stars)) 843s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 843s > (r = read_stars(tif, proxy = TRUE)) 843s stars_proxy object with 1 attribute in 1 file(s): 843s $L7_ETMs.tif 843s [1] "[...]/L7_ETMs.tif" 843s 843s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s band 1 6 NA NA NA NA 844s > if (interactive()) { 844s + plot(r) 844s + } 844s > dim(r) 844s x y band 844s 349 352 6 844s > r[,,,2:3] 844s stars_proxy object with 1 attribute in 1 file(s): 844s $L7_ETMs.tif 844s [1] "[...]/L7_ETMs.tif" 844s 844s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s band 2 3 NA NA NA NA 844s > r+r 844s stars_proxy object with 1 attribute in 1 file(s): 844s $L7_ETMs.tif 844s [1] "[...]/L7_ETMs.tif" 844s 844s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s band 1 6 NA NA NA NA 844s call_list: 844s [[1]] 844s e1 + e2 844s attr(,".Environment") 844s 844s 844s This object has pending lazy operations: dimensions as printed may not reflect this. 844s > st_as_stars(sin(r), downsample = 2) 844s stars object with 3 dimensions and 1 attribute 844s attribute(s): 844s Min. 1st Qu. Median Mean 3rd Qu. Max. 844s L7_ETMs.tif -0.9999902 -0.676772 0.0353983 0.01655317 0.7210377 0.9999119 844s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 117 288776 85.01 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 118 9120761 -85.02 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s band 1 6 NA NA NA NA 844s > aperm(r, c(3,2,1)) 844s stars_proxy object with 1 attribute in 1 file(s): 844s $L7_ETMs.tif 844s [1] "[...]/L7_ETMs.tif" 844s 844s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s band 1 6 NA NA NA NA 844s call_list: 844s [[1]] 844s aperm(a = a, perm = perm) 844s attr(,".Environment") 844s 844s 844s This object has pending lazy operations: dimensions as printed may not reflect this. 844s > if (interactive()) { 844s + plot(r) 844s + } 844s > (xx = c(r,r)) 844s stars_proxy object with 2 attributes in 2 file(s): 844s $L7_ETMs.tif 844s [1] "[...]/L7_ETMs.tif" 844s 844s $L7_ETMs.tif 844s [1] "[...]/L7_ETMs.tif" 844s 844s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s band 1 6 NA NA NA NA 844s > st_redimension(xx) 844s stars_proxy object with 1 attribute in 2 file(s): 844s $L7_ETMs.tif.L7_ETMs.tif 844s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 844s 844s dimension(s): 844s from to offset delta refsys point 844s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 844s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 844s band 1 6 NA NA NA NA 844s new_dim 1 2 NA NA NA NA 844s values x/y 844s x NULL [x] 844s y NULL [y] 844s band NULL 844s new_dim L7_ETMs.tif, L7_ETMs.tif 844s > st_as_stars(r) 844s stars object with 3 dimensions and 1 attribute 844s attribute(s): 844s Min. 1st Qu. Median Mean 3rd Qu. Max. 844s L7_ETMs.tif 1 54 69 68.91242 86 255 844s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s band 1 6 NA NA NA NA 844s > (y = st_apply(r, 1:2, max)) 844s stars_proxy object with 1 attribute in 1 file(s): 844s $L7_ETMs.tif 844s [1] "[...]/L7_ETMs.tif" 844s 844s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s band 1 6 NA NA NA NA 844s call_list: 844s [[1]] 844s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 844s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 844s attr(,".Environment") 844s 844s 844s This object has pending lazy operations: dimensions as printed may not reflect this. 844s > (yy = st_as_stars(y, downsample = 1)) 844s stars object with 2 dimensions and 1 attribute 844s attribute(s): 844s Min. 1st Qu. Median Mean 3rd Qu. Max. 844s max 55 85 96 99.38568 113 255 844s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 176 9120761 -57 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s > (y = adrop(st_apply(r, c("x", "y"), max))) 844s stars_proxy object with 1 attribute in 1 file(s): 844s $L7_ETMs.tif 844s [1] "[...]/L7_ETMs.tif" 844s 844s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s band 1 6 NA NA NA NA 844s call_list: 844s [[1]] 844s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 844s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 844s attr(,".Environment") 844s 844s 844s [[2]] 844s adrop(x = x, drop = drop) 844s attr(,".Environment") 844s 844s 844s This object has pending lazy operations: dimensions as printed may not reflect this. 844s > (yy = st_as_stars(y, downsample = 1)) 844s stars object with 2 dimensions and 1 attribute 844s attribute(s): 844s Min. 1st Qu. Median Mean 3rd Qu. Max. 844s max 55 85 96 99.38568 113 255 844s dimension(s): 844s from to offset delta refsys point x/y 844s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x] 844s y 1 176 9120761 -57 SIRGAS 2000 / UTM zone 25S FALSE [y] 844s > plot(yy) 844s > (y = adrop(st_apply(r, c("x", "band"), max))) 844s stars_proxy object with 1 attribute in 1 file(s): 844s $L7_ETMs.tif 844s [1] "[...]/L7_ETMs.tif" 844s 844s dimension(s): 845s from to offset delta refsys point x/y 845s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 845s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 845s band 1 6 NA NA NA NA 845s call_list: 845s [[1]] 845s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 845s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 845s attr(,".Environment") 845s 845s 845s [[2]] 845s adrop(x = x, drop = drop) 845s attr(,".Environment") 845s 845s 845s This object has pending lazy operations: dimensions as printed may not reflect this. 845s > (yy = st_as_stars(y, downsample = 1)) 845s stars object with 2 dimensions and 1 attribute 845s attribute(s): 845s Min. 1st Qu. Median Mean 3rd Qu. Max. 845s max 77 111 133 137.8505 157 255 845s dimension(s): 845s from to offset delta refsys point 845s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE 845s band 1 6 NA NA NA NA 845s > rm(yy) 845s > 845s > (xx = c(r,r)) 845s stars_proxy object with 2 attributes in 2 file(s): 845s $L7_ETMs.tif 845s [1] "[...]/L7_ETMs.tif" 845s 845s $L7_ETMs.tif 845s [1] "[...]/L7_ETMs.tif" 845s 845s dimension(s): 845s Warning message: 845s In FUN(X[[i]], ...) : 845s st_apply on x/y dimensions applied to downsampled image(s) 845s from to offset delta refsys point x/y 845s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 845s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 845s band 1 6 NA NA NA NA 845s > names(xx) = c("a", "b") 845s > xx["a"] 845s stars_proxy object with 1 attribute in 1 file(s): 845s $a 845s [1] "[...]/L7_ETMs.tif" 845s 845s dimension(s): 845s from to offset delta refsys point x/y 845s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 845s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 845s band 1 6 NA NA NA NA 845s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085)) 845s > buf = st_buffer(st_sfc(pt, crs = st_crs(r)), 1500) 845s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])), 845s + crs = st_crs(r)) 845s > r = r[buf] # crops 845s > r = r[buf, epsilon = 1e-5] # crops with shrinked bounding box 845s > 845s > # c: 845s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata") 845s > if (FALSE && f != "") { 845s + files = c("avhrr-only-v2.19810901.nc", 845s + "avhrr-only-v2.19810902.nc", 845s + "avhrr-only-v2.19810903.nc", 845s + "avhrr-only-v2.19810904.nc", 845s + "avhrr-only-v2.19810905.nc", 845s + "avhrr-only-v2.19810906.nc", 845s + "avhrr-only-v2.19810907.nc", 845s + "avhrr-only-v2.19810908.nc", 845s + "avhrr-only-v2.19810909.nc") 845s + l = list() 845s + for (f in files) { 845s + from = system.file(paste0("netcdf/", f), package = "starsdata") 845s + l[[f]] = read_stars(from, sub = c("sst", "anom"), proxy = TRUE) 845s + } 845s + ret = do.call(c, l) 845s + print(ret) 845s + all = system.file(paste0("netcdf/", files), package = "starsdata") 845s + ret = read_stars(all, sub = c("sst", "anom")) 845s + print(ret) 845s + print(st_redimension(ret)) # collapse the two attributes into new dimension 845s + 845s + try(ret <- c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2))) 845s + #print(ret) 845s + #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times"))) 845s + #print(ret) 845s + ret <- st_redimension(l[[1]], along = list(times = as.Date("1981-09-01") + 0:1)) 845s + print(ret) 845s + } 845s > 845s > # demonstrate that environments work: 845s > x = read_stars(tif, proxy = TRUE) 845s > f = function(x) { 845s + g = function(xx) { 845s + ndvi = function(z1, z2, z3, z4, z5, z6) (z2-z1)/(z2+z1) 845s + st_apply(xx, 1:2, ndvi) 845s + } 845s + g(x) 845s + } 845s > (x = f(x)) 845s stars_proxy object with 1 attribute in 1 file(s): 845s $L7_ETMs.tif 845s [1] "[...]/L7_ETMs.tif" 845s 845s dimension(s): 845s from to offset delta refsys point x/y 845s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 845s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 845s band 1 6 NA NA NA NA 845s call_list: 845s [[1]] 845s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 845s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 845s attr(,".Environment") 845s 845s 845s This object has pending lazy operations: dimensions as printed may not reflect this. 845s > st_as_stars(x) 845s stars object with 2 dimensions and 1 attribute 845s attribute(s): 845s Min. 1st Qu. Median Mean 3rd Qu. Max. 845s ndvi -0.2828283 -0.1081081 -0.08287293 -0.08464615 -0.05882353 0.09259259 845s dimension(s): 845s from to offset delta refsys point x/y 845s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 845s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 845s > 845s BEGIN TEST raster.R 845s 845s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 845s Copyright (C) 2024 The R Foundation for Statistical Computing 845s Platform: aarch64-unknown-linux-gnu 845s 845s R is free software and comes with ABSOLUTELY NO WARRANTY. 845s You are welcome to redistribute it under certain conditions. 845s Type 'license()' or 'licence()' for distribution details. 845s 845s R is a collaborative project with many contributors. 845s Type 'contributors()' for more information and 845s 'citation()' on how to cite R or R packages in publications. 845s 845s Type 'demo()' for some demos, 'help()' for on-line help, or 845s 'help.start()' for an HTML browser interface to help. 845s Type 'q()' to quit R. 845s 845s > options(rgdal_show_exportToProj4_warnings = "none") 845s > suppressPackageStartupMessages(library(stars)) 846s > 846s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require("raster", quietly = TRUE) && 846s + suppressPackageStartupMessages(require("terra", quietly = TRUE))) { 846s + 846s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 846s + (x = read_stars(tif)) 846s + (r = as(x, "Raster")) 846s + (y = st_as_stars(r)) 846s + 846s + # single band: 846s + x = adrop(x[,,,1]) 846s + r = as(x, "Raster") 846s + (y = st_as_stars(r)) 846s + 846s + # proxy: 846s + (x = read_stars(tif, proxy = TRUE)) 846s + (r = as(x, "Raster")) 846s + (y = st_as_stars(r)) 846s + (y2 = st_as_stars(r, proxy = TRUE)) 846s + } 851s stars_proxy object with 1 attribute in 1 file(s): 851s $L7_ETMs.tif 851s [1] "[...]/L7_ETMs.tif" 851s 851s dimension(s): 851s from to offset delta refsys point x/y 851s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 851s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 851s band 1 6 NA NA NA NA 851s > 851s > if (require(terra, quietly = TRUE)) { 851s + ## terra ------------- 851s + stopifnot(require(terra)) 851s + (x = read_stars(tif)) 851s + (r = as(x, "SpatRaster")) 851s + (y = st_as_stars(r)) 851s + 851s + # single band: 851s + x = adrop(x[,,,1]) 851s + r = as(x, "SpatRaster") 851s + (y = st_as_stars(r)) 851s + 851s + # proxy: 851s + (x = read_stars(tif, proxy = TRUE)) 851s + (r = as(x, "SpatRaster")) 851s + (y = st_as_stars(r)) 851s + (y2 = st_as_stars(r, proxy = TRUE)) 851s + 851s + f = system.file("tif/lc.tif", package = "stars") 851s + lc = read_stars(system.file("tif/lc.tif", package = "stars")) 851s + levels(lc[[1]]) 851s + r = rast(lc) 851s + e = attr(lc[[1]], "exclude") 851s + 851s + if (packageVersion("terra") >= "1.5.48") { 851s + 851s + print(all.equal(terra::levels(r)[[1]][,2], terra::levels(rast(f))[[1]][!e,2])) 851s + print(all.equal(terra::coltab(r)[[1]][!e,], terra::coltab(rast(f))[[1]][!e,], check.attributes = FALSE)) 851s + 851s + r<- rast(nrow=10, ncol=10) 851s + set.seed(5) 851s + values(r)<- sample(1:3, size = ncell(r), replace = TRUE) 851s + levels(r) <- data.frame(ID=1:3, category = c("c1", "c2", "c3")) 851s + 851s + r2<- rast(nrow=10, ncol=10) 851s + set.seed(6) 851s + values(r2)<- sample(c(0,2,3), size = ncell(r2), replace = TRUE) 851s + levels(r2) <- data.frame(ID=c(0,2,3), category = c("x1", "x2", "x3")) 851s + 851s + r3<- c(r,r2) 851s + names(r3)<- c("lyr.1", "lyr.2") 851s + 851s + r3_stars<- st_as_stars(r3) 851s + 851s + st_redimension(r3_stars) |> print() 851s + rast(r3_stars) |> levels() |> print() 851s + 851s + m = matrix(1:121, 11, 11) 851s + bb = st_bbox(c(xmin=0, xmax=11, ymin=0, ymax=11)) 851s + s = st_as_stars(bb, values = m) 851s + r = rast(s) 851s + aggregate(r, 2) |> st_as_stars() -> r.s 851s + stopifnot(isTRUE(all.equal(r.s[,1:5,1:5], st_downsample(s, 1, FUN = mean)))) 851s + } 851s + } 851s [1] TRUE 851s [1] TRUE 852s stars object with 3 dimensions and 1 attribute 852s attribute(s): 852s lyr.1.lyr.2 852s c1:34 852s c2:32 852s c3:34 852s x1:28 852s x2:37 852s x3:35 852s dimension(s): 852s from to offset delta refsys values x/y 852s x 1 10 -180 36 WGS 84 (CRS84) NULL [x] 852s y 1 10 90 -18 WGS 84 (CRS84) NULL [y] 852s new_dim 1 2 NA NA NA lyr.1, lyr.2 852s [[1]] 852s IDs categories 852s 1 1 c1 852s 2 2 c2 852s 3 3 c3 852s 852s [[2]] 852s IDs categories 852s 1 0 x1 852s 2 2 x2 852s 3 3 x3 852s 852s > 852s > 852s BEGIN TEST rasterize.R 852s 852s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 852s Copyright (C) 2024 The R Foundation for Statistical Computing 852s Platform: aarch64-unknown-linux-gnu 852s 852s R is free software and comes with ABSOLUTELY NO WARRANTY. 852s You are welcome to redistribute it under certain conditions. 852s Type 'license()' or 'licence()' for distribution details. 852s 852s R is a collaborative project with many contributors. 852s Type 'contributors()' for more information and 852s 'citation()' on how to cite R or R packages in publications. 852s 852s Type 'demo()' for some demos, 'help()' for on-line help, or 852s 'help.start()' for an HTML browser interface to help. 852s Type 'q()' to quit R. 852s 852s > suppressPackageStartupMessages(library(stars)) 852s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf")) 853s > (x = st_rasterize(nc)) # default grid: 853s stars object with 2 dimensions and 12 attributes 853s attribute(s): 853s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 853s AREA 0.042 0.108 0.142 1.451932e-01 0.181 0.241 30904 853s PERIMETER 0.999 1.461 1.716 1.786110e+00 2.004 3.640 30904 853s CNTY_ 1825.000 1907.000 1989.000 1.998403e+03 2085.000 2241.000 30904 853s CNTY_ID 1825.000 1907.000 1989.000 1.998403e+03 2085.000 2241.000 30904 853s FIPSNO 37001.000 37049.000 37101.000 3.710042e+04 37153.000 37199.000 30904 853s CRESS_ID 1.000 25.000 51.000 5.071206e+01 77.000 100.000 30904 853s BIR74 248.000 1323.000 2648.000 3.791637e+03 4139.000 21588.000 30904 853s SID74 0.000 3.000 5.000 7.891985e+00 10.000 44.000 30904 853s NWBIR74 1.000 297.000 844.000 1.246210e+03 1396.000 8027.000 30904 853s BIR79 319.000 1606.000 3108.000 4.852046e+03 5400.000 30757.000 30904 853s SID79 0.000 3.000 6.000 9.584098e+00 13.000 57.000 30904 853s NWBIR79 3.000 360.000 1058.000 1.604642e+03 1524.000 11631.000 30904 853s dimension(s): 853s from to offset delta refsys point x/y 853s x 1 461 -84.32 0.01925 NAD27 FALSE [x] 853s y 1 141 36.59 -0.01925 NAD27 FALSE [y] 853s > plot(x, axes = TRUE) 853s > # a bit more customized grid: 853s > (x = st_rasterize(nc, st_as_stars(st_bbox(nc), nx = 100, ny = 50, values = NA_real_))) 854s stars object with 2 dimensions and 12 attributes 854s attribute(s): 854s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 854s AREA 0.042 0.108 0.142 0.145536 0.181 0.241 2373 854s PERIMETER 0.999 1.470 1.716 1.789032 2.004 3.640 2373 854s CNTY_ 1825.000 1908.000 1989.000 1999.761325 2088.000 2241.000 2373 854s CNTY_ID 1825.000 1908.000 1989.000 1999.761325 2088.000 2241.000 2373 854s FIPSNO 37001.000 37049.000 37101.000 37100.327750 37151.000 37199.000 2373 854s CRESS_ID 1.000 25.000 51.000 50.663875 76.000 100.000 2373 854s BIR74 248.000 1323.500 2648.000 3790.530263 4139.000 21588.000 2373 854s SID74 0.000 3.000 5.000 7.905976 10.000 44.000 2373 854s NWBIR74 1.000 289.000 844.000 1246.116483 1396.000 8027.000 2373 854s BIR79 319.000 1606.000 3108.000 4848.231062 5386.000 30757.000 2373 854s SID79 0.000 3.000 6.000 9.574419 13.000 57.000 2373 854s NWBIR79 3.000 360.000 1058.000 1602.740769 1524.000 11631.000 2373 854s dimension(s): 854s from to offset delta refsys point x/y 854s x 1 100 -84.32 0.08867 NAD27 FALSE [x] 854s y 1 50 36.59 -0.05415 NAD27 FALSE [y] 854s > plot(x, axes = TRUE) 854s > (ls = st_sf(a = 1:2, st_sfc(st_linestring(rbind(c(0.1, 0), c(1.1, 1))), st_linestring(rbind(c(0, 0.05), c(1, 0.05)))))) 854s Simple feature collection with 2 features and 1 field 854s Geometry type: LINESTRING 854s Dimension: XY 854s Bounding box: xmin: 0 ymin: 0 xmax: 1.1 ymax: 1 854s CRS: NA 854s a 854s 1 1 854s 2 2 854s c..st_sfc.st_linestring.rbind.c.0.1..0...c.1.1..1.....st_linestring.rbind.c.0..........0.05...c.1..0.05...... 854s 1 LINESTRING (0.1 0, 1.1 1) 854s 2 LINESTRING (0 0.05, 1 0.05) 854s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = NA_real_)) 854s stars object with 2 dimensions and 1 attribute 854s attribute(s): 854s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 854s values NA NA NA NaN NA NA 100 854s dimension(s): 854s from to offset delta x/y 854s x 1 10 0 0.1 [x] 854s y 1 10 1 -0.1 [y] 854s > # the following two plots confirm that (only) the 854s > # upper-left corner is part of the grid cell (when dy is negative), leading 854s > # to a seemingly half-gridcell-shift problem: 854s > ## sf_extSoftVersion()["GDAL"] 854s > plot(st_rasterize(ls, grd), axes = TRUE, reset = FALSE) # ALL_TOUCHED=FALSE; 854s > plot(ls, add = TRUE, col = "red") 854s > plot(st_rasterize(ls, grd, options = "ALL_TOUCHED=TRUE"), axes = TRUE, reset = FALSE) 854s > plot(ls, add = TRUE, col = "red") 854s > # add lines to existing 0 values, summing values in case of multiple lines: 854s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = 0)) 854s stars object with 2 dimensions and 1 attribute 854s attribute(s): 854s Min. 1st Qu. Median Mean 3rd Qu. Max. 854s values 0 0 0 0 0 0 854s dimension(s): 854s from to offset delta x/y 854s x 1 10 0 0.1 [x] 854s y 1 10 1 -0.1 [y] 854s > r = st_rasterize(ls, grd, options = c("MERGE_ALG=ADD", "ALL_TOUCHED=TRUE")) 854s > plot(r, axes = TRUE, reset = FALSE) 854s > plot(ls, add = TRUE, col = "red") 854s > 854s BEGIN TEST rectilinear.R 854s 854s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 854s Copyright (C) 2024 The R Foundation for Statistical Computing 854s Platform: aarch64-unknown-linux-gnu 854s 854s R is free software and comes with ABSOLUTELY NO WARRANTY. 854s You are welcome to redistribute it under certain conditions. 854s Type 'license()' or 'licence()' for distribution details. 854s 854s R is a collaborative project with many contributors. 854s Type 'contributors()' for more information and 854s 'citation()' on how to cite R or R packages in publications. 854s 854s Type 'demo()' for some demos, 'help()' for on-line help, or 854s 'help.start()' for an HTML browser interface to help. 854s Type 'q()' to quit R. 854s 854s > suppressPackageStartupMessages(library(stars)) 854s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 854s > x = read_stars(tif) 854s > (xx = x[,c(1:347,349),c(1:350,352),]) # rectilinear: one-but-last row & col missing 854s stars object with 3 dimensions and 1 attribute 854s attribute(s): 855s Min. 1st Qu. Median Mean 3rd Qu. Max. 855s L7_ETMs.tif 1 54 69 68.9915 86 255 855s dimension(s): 855s from to refsys point 855s x 1 348 SIRGAS 2000 / UTM zone 25S FALSE 855s y 1 351 SIRGAS 2000 / UTM zone 25S FALSE 855s band 1 6 NA NA 855s values x/y 855s x [288790.5,288819),...,[298708.5,298737) [x] 855s y [9120747,9120718),...,[9110743,9110715) [y] 855s band NULL 855s > image(xx) # chooses useRaster itself 855s > # see also tidy.R for a ggplot example, leaving out the row. 855s > 855s > m = matrix(1:16, 4, 4) 855s > x = 1:4 855s > y = 2:5 855s > (st = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y))) 855s stars object with 2 dimensions and 1 attribute 855s attribute(s): 855s Min. 1st Qu. Median Mean 3rd Qu. Max. 855s m 1 4.75 8.5 8.5 12.25 16 855s dimension(s): 855s from to offset delta point x/y 855s x 1 4 1 1 FALSE [x] 855s y 1 4 2 1 FALSE [y] 855s > st = st_set_dimensions(st, 1, values = c(1,2,3,4,6)) 855s > st = st_set_dimensions(st, 2, values = c(2,3,4,5,8)) 855s > try(st_set_dimensions(st, 2, values = c(2,3,4,5,8,20))) # one too many 855s > 855s > # $<-.stars: 855s > st$foo = st$m * 2 855s > Error in st_set_dimensions(st, 2, values = c(2, 3, 4, 5, 8, 20)) : 855s length of values ( 6 ) does not match length of dimension 2 ( 4 ) 855s st 855s stars object with 2 dimensions and 2 attributes 855s attribute(s): 855s Min. 1st Qu. Median Mean 3rd Qu. Max. 855s m 1 4.75 8.5 8.5 12.25 16 855s foo 2 9.50 17.0 17.0 24.50 32 855s dimension(s): 855s from to point values x/y 855s x 1 4 FALSE [1,2),...,[4,6) [x] 855s y 1 4 FALSE [2,3),...,[5,8) [y] 855s > 855s > # st_as_sf: 855s > 855s > if (utils::packageVersion("sf") > "0.7.2") { 855s + plot(st_as_sf(st, as_points = FALSE), axes = TRUE) 855s + } 855s > 855s > image(st, text_values = TRUE, axes = TRUE) 855s > 855s BEGIN TEST redimension.R 855s 855s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 855s Copyright (C) 2024 The R Foundation for Statistical Computing 855s Platform: aarch64-unknown-linux-gnu 855s 855s R is free software and comes with ABSOLUTELY NO WARRANTY. 855s You are welcome to redistribute it under certain conditions. 855s Type 'license()' or 'licence()' for distribution details. 855s 855s R is a collaborative project with many contributors. 855s Type 'contributors()' for more information and 855s 'citation()' on how to cite R or R packages in publications. 855s 855s Type 'demo()' for some demos, 'help()' for on-line help, or 855s 'help.start()' for an HTML browser interface to help. 855s Type 'q()' to quit R. 855s 855s > suppressPackageStartupMessages(library(stars)) 856s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 856s > r = read_stars(list(a = c(tif,tif), b = c(tif, tif)), proxy = TRUE) 856s > (xx = st_redimension(r, along = list(foo = 1:4))) 856s stars_proxy object with 1 attribute in 4 file(s): 856s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 856s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s [4] "[...]/L7_ETMs.tif" 856s 856s dimension(s): 856s from to offset delta refsys point x/y 856s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 856s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 856s band 1 6 NA NA NA NA 856s foo 1 4 1 1 NA NA 856s > (rr = c(xx, xx)) 856s stars_proxy object with 2 attributes in 8 file(s): 856s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 856s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s [4] "[...]/L7_ETMs.tif" 856s 856s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 856s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s [4] "[...]/L7_ETMs.tif" 856s 856s dimension(s): 856s from to offset delta refsys point x/y 856s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 856s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 856s band 1 6 NA NA NA NA 856s foo 1 4 1 1 NA NA 856s > # st_as_stars(rr) 856s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01"))))) 856s stars_proxy object with 1 attribute in 8 file(s): 856s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif.a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 856s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s 856s dimension(s): 856s from to offset delta refsys point x/y 856s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 856s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 856s band 1 6 NA NA NA NA 856s foo 1 4 1 1 NA NA 856s bar 1 2 2001-01-01 365 days Date NA 856s > (rr = c(a = xx, b = xx)) 856s stars_proxy object with 2 attributes in 8 file(s): 856s $a 856s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s [4] "[...]/L7_ETMs.tif" 856s 856s $b 856s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s [4] "[...]/L7_ETMs.tif" 856s 856s dimension(s): 856s from to offset delta refsys point x/y 856s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 856s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 856s band 1 6 NA NA NA NA 856s foo 1 4 1 1 NA NA 856s > # st_as_stars(rr) 856s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01"))))) 856s stars_proxy object with 1 attribute in 8 file(s): 856s $a.b 856s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 856s 856s dimension(s): 856s from to offset delta refsys point x/y 856s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 856s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 856s band 1 6 NA NA NA NA 856s foo 1 4 1 1 NA NA 856s bar 1 2 2001-01-01 365 days Date NA 856s > 856s BEGIN TEST sf.R 856s 856s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 856s Copyright (C) 2024 The R Foundation for Statistical Computing 856s Platform: aarch64-unknown-linux-gnu 856s 856s R is free software and comes with ABSOLUTELY NO WARRANTY. 856s You are welcome to redistribute it under certain conditions. 856s Type 'license()' or 'licence()' for distribution details. 856s 856s R is a collaborative project with many contributors. 856s Type 'contributors()' for more information and 856s 'citation()' on how to cite R or R packages in publications. 856s 856s Type 'demo()' for some demos, 'help()' for on-line help, or 856s 'help.start()' for an HTML browser interface to help. 856s Type 'q()' to quit R. 856s 856s > suppressPackageStartupMessages(library(stars)) 857s > library(sf) 857s > #jp2 = system.file("jp2/B01.jp2", package = "stars") 857s > #(x = read_stars(jp2, options = c("OVERVIEW_LEVEL=3"))) 857s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 857s > #(x = read_stars(tif, options = c("OVERVIEW_LEVEL=3"))) # FIXME: breaks on windows 857s > (x = read_stars(tif)[,1:20,1:20]) 857s stars object with 3 dimensions and 1 attribute 857s attribute(s): 857s Min. 1st Qu. Median Mean 3rd Qu. Max. 857s L7_ETMs.tif 17 44 58 58.19667 70 130 857s dimension(s): 857s from to offset delta refsys point x/y 857s x 1 20 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 857s y 1 20 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 857s band 1 6 NA NA NA NA 857s > # names(x) = "L7_ETM" 857s > 857s > # library(abind) 857s > # x = adrop(x) 857s > image(x) 857s > (sfc = st_as_sfc(x, as_points = FALSE)) 857s Geometry set for 400 features 857s Geometry type: POLYGON 857s Dimension: XY 857s Bounding box: xmin: 288776.3 ymin: 9120191 xmax: 289346.3 ymax: 9120761 857s Projected CRS: SIRGAS 2000 / UTM zone 25S 857s First 5 geometries: 857s POLYGON ((288776.3 9120761, 288804.8 9120761, 2... 857s > plot(sfc, add =TRUE) 857s POLYGON ((288804.8 9120761, 288833.3 9120761, 2... 857s POLYGON ((288833.3 9120761, 288861.8 9120761, 2... 857s POLYGON ((288861.8 9120761, 288890.3 9120761, 2... 857s POLYGON ((288890.3 9120761, 288918.8 9120761, 2... 857s > (sfc = st_as_sfc(x, as_points = TRUE)) 857s Geometry set for 400 features 857s Geometry type: POINT 857s Dimension: XY 857s Bounding box: xmin: 288790.5 ymin: 9120205 xmax: 289332 ymax: 9120747 857s Projected CRS: SIRGAS 2000 / UTM zone 25S 857s First 5 geometries: 857s POINT (288790.5 9120747) 857s POINT (288819 9120747) 857s > plot(sfc, add = TRUE) 857s POINT (288847.5 9120747) 857s POINT (288876 9120747) 857s POINT (288904.5 9120747) 857s > 857s > sf = st_as_sf(x, as_points = FALSE) 857s > plot(sf, border = NA) 857s > sf = st_as_sf(x[,,,1], as_points = FALSE, merge = TRUE) 857s > plot(sf, border = NA) 857s > 857s > sfc1 <- st_as_sfc(x, as_points = TRUE, use_cpp = TRUE, na.rm = FALSE) 857s > sfc2 <- st_as_sfc(x, as_points = TRUE, use_cpp = FALSE) 857s > identical(sfc1, sfc2) 857s [1] TRUE 857s > 857s > sfc1 <- st_as_sfc(x, as_points = FALSE, use_cpp = TRUE, na.rm = FALSE) 857s > sfc2 <- st_as_sfc(x, as_points = FALSE, use_cpp = FALSE) 857s > identical(sfc1, sfc2) 857s [1] TRUE 857s > 857s > # sf -> stars -> sf 857s > x = st_sfc(st_point(0:1), st_point(1:2), st_point(2:3)) 857s > m = matrix(1:9,3) 857s > colnames(m) = c("a", "b", "c") 857s > foo = st_sf(m, geom = x) 857s > x = st_as_stars(foo) 857s > c(x) 857s stars object with 1 dimensions and 3 attributes 857s attribute(s): 857s Min. 1st Qu. Median Mean 3rd Qu. Max. 857s a 1 1.5 2 2 2.5 3 857s b 4 4.5 5 5 5.5 6 857s c 7 7.5 8 8 8.5 9 857s dimension(s): 857s from to point values 857s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 857s > st_redimension(x) 857s stars object with 2 dimensions and 1 attribute 857s attribute(s): 857s Min. 1st Qu. Median Mean 3rd Qu. Max. 857s a.b.c 1 3 5 5 7 9 857s dimension(s): 857s from to point values 857s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 857s new_dim 1 3 NA a, b, c 857s > c(x, x) 857s stars object with 1 dimensions and 6 attributes 857s attribute(s): 857s Min. 1st Qu. Median Mean 3rd Qu. Max. 857s a 1 1.5 2 2 2.5 3 857s b 4 4.5 5 5 5.5 6 857s c 7 7.5 8 8 8.5 9 857s a.1 1 1.5 2 2 2.5 3 857s b.1 4 4.5 5 5 5.5 6 857s c.1 7 7.5 8 8 8.5 9 857s dimension(s): 857s from to point values 857s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 857s > (y = st_redimension(x, along = list(time = as.Date("2017-11-27") + 0:2))) 857s stars object with 2 dimensions and 1 attribute 857s attribute(s): 857s Min. 1st Qu. Median Mean 3rd Qu. Max. 857s a.b.c 1 3 5 5 7 9 857s dimension(s): 857s from to offset delta refsys point values 857s geom 1 3 NA NA NA TRUE POINT (0 1),...,POINT (2 3) 857s time 1 3 2017-11-27 1 days Date NA NULL 857s > st_as_sf(y) 857s Simple feature collection with 3 features and 3 fields 857s Geometry type: POINT 857s Dimension: XY 857s Bounding box: xmin: 0 ymin: 1 xmax: 2 ymax: 3 857s CRS: NA 857s 2017-11-27 2017-11-28 2017-11-29 geom 857s 1 1 4 7 POINT (0 1) 857s 2 2 5 8 POINT (1 2) 857s 3 3 6 9 POINT (2 3) 857s > st_as_sf(st_as_stars(foo)) 857s Simple feature collection with 3 features and 3 fields 857s Geometry type: POINT 857s Dimension: XY 857s Bounding box: xmin: 0 ymin: 1 xmax: 2 ymax: 3 857s CRS: NA 857s a b c geom 857s 1 1 4 7 POINT (0 1) 857s 2 2 5 8 POINT (1 2) 857s 3 3 6 9 POINT (2 3) 857s > 857s > c(x,x,along=1) # NEEDS FIXING! 857s stars object with 1 dimensions and 3 attributes 857s attribute(s): 857s Min. 1st Qu. Median Mean 3rd Qu. Max. 857s a 1 1.25 2 2 2.75 3 857s b 4 4.25 5 5 5.75 6 857s c 7 7.25 8 8 8.75 9 857s dimension(s): 857s from to point values 857s geom 1 6 TRUE POINT (0 1),...,POINT (2 3) 857s > # st_as_stars.sfc 857s > st_as_stars(st_geometry(st_as_sf(y)), nx = 10, ny = 10, as_points = FALSE) 857s stars object with 2 dimensions and 1 attribute 857s attribute(s): 857s Min. 1st Qu. Median Mean 3rd Qu. Max. 857s values 0 0 0 0.06 0 1 857s dimension(s): 857s from to offset delta x/y 857s x 1 10 0 0.2 [x] 857s y 1 10 3 -0.2 [y] 857s > 857s BEGIN TEST sp.R 857s 857s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 857s Copyright (C) 2024 The R Foundation for Statistical Computing 857s Platform: aarch64-unknown-linux-gnu 857s 857s R is free software and comes with ABSOLUTELY NO WARRANTY. 857s You are welcome to redistribute it under certain conditions. 857s Type 'license()' or 'licence()' for distribution details. 857s 857s R is a collaborative project with many contributors. 857s Type 'contributors()' for more information and 857s 'citation()' on how to cite R or R packages in publications. 857s 857s Type 'demo()' for some demos, 'help()' for on-line help, or 857s 'help.start()' for an HTML browser interface to help. 857s Type 'q()' to quit R. 857s 857s > options(rgdal_show_exportToProj4_warnings = "none") 857s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE))) { 857s + demo(meuse) 857s + # remove +init=xxx 857s + meuse@proj4string = CRS( 857s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs" 857s + ) 857s + meuse.grid@proj4string = CRS( 857s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs" 857s + ) 857s + 857s + suppressPackageStartupMessages(library(stars)) 857s + (m = st_as_stars(meuse)) 857s + (gr = st_as_stars(meuse.grid)) 857s + 857s + m2 = as(m, "Spatial") 857s + summary(m2) 857s + gr2 = as(gr, "Spatial") 857s + summary(gr2) 857s + 857s + all.equal(meuse, m2, check.attributes = FALSE) 857s + fullgrid(meuse.grid) = TRUE 857s + all.equal(meuse.grid, gr2, check.attributes = FALSE) 857s + 857s + #all.equal(meuse, m2) 857s + #all.equal(meuse.grid, gr2) 857s + } 858s 858s 858s demo(meuse) 858s ---- ~~~~~ 858s 858s > require(sp) 858s 858s > crs = CRS("EPSG:28992") 858s 858s > data("meuse") 858s 858s > coordinates(meuse) <- ~x+y 858s 858s > proj4string(meuse) <- crs 858s 858s > data("meuse.grid") 858s 858s > coordinates(meuse.grid) <- ~x+y 858s 858s > gridded(meuse.grid) <- TRUE 858s 858s > proj4string(meuse.grid) <- crs 858s 858s > data("meuse.riv") 858s 858s > meuse.riv <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)),"meuse.riv"))) 858s 858s > proj4string(meuse.riv) <- crs 858s 858s > data("meuse.area") 858s 858s > meuse.area = SpatialPolygons(list(Polygons(list(Polygon(meuse.area)), "area"))) 858s 858s > proj4string(meuse.area) <- crs 858s [1] TRUE 858s > 859s BEGIN TEST spacetime.R 859s 859s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 859s Copyright (C) 2024 The R Foundation for Statistical Computing 859s Platform: aarch64-unknown-linux-gnu 859s 859s R is free software and comes with ABSOLUTELY NO WARRANTY. 859s You are welcome to redistribute it under certain conditions. 859s Type 'license()' or 'licence()' for distribution details. 859s 859s R is a collaborative project with many contributors. 859s Type 'contributors()' for more information and 859s 'citation()' on how to cite R or R packages in publications. 859s 859s Type 'demo()' for some demos, 'help()' for on-line help, or 859s 'help.start()' for an HTML browser interface to help. 859s Type 'q()' to quit R. 859s 859s > suppressPackageStartupMessages(library(stars)) 859s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 859s + set.seed(1331) 859s + Sys.setenv(TZ="UTC") 859s + example(STFDF) 859s + 859s + x = st_as_stars(stfdf) 859s + xx = as(x, "STFDF") 859s + 859s + # as.xts.stars: 859s + library(xts) 859s + xts = as.xts(x) 859s + st_as_stars(xts) 859s + st_as_stars(xts, dimensions = st_dimensions(x)) 859s + 859s + library(sp) 859s + pts = SpatialPoints(rbind(c(0,0), c(0,1), c(1,0), c(1,1))) 859s + gridded(pts) = TRUE 859s + 859s + tm = xts(1:10, as.Date("2010-01-01")+0:9) 859s + stfdf = STFDF(pts, tm, data.frame(foo = seq_len(length(pts) * length(tm)))) 859s + x = st_as_stars(stfdf) 859s + xx = as(x, "STFDF") 859s + 859s + x = st_as_stars(as(stfdf, "STSDF")) 859s + } 860s 860s STFDF> sp = cbind(x = c(0,0,1), y = c(0,1,1)) 860s 860s STFDF> row.names(sp) = paste("point", 1:nrow(sp), sep="") 860s 860s STFDF> library(sp) 860s 860s STFDF> sp = SpatialPoints(sp) 860s 860s STFDF> time = as.POSIXct("2010-08-05")+3600*(10:13) 860s 860s STFDF> m = c(10,20,30) # means for each of the 3 point locations 860s 860s STFDF> mydata = rnorm(length(sp)*length(time),mean=rep(m, 4)) 860s 860s STFDF> IDs = paste("ID",1:length(mydata)) 860s 860s STFDF> mydata = data.frame(values = signif(mydata,3), ID=IDs) 860s 860s STFDF> stfdf = STFDF(sp, time, mydata) 860s 860s STFDF> stfdf 860s An object of class "STFDF" 860s Slot "data": 860s values ID 860s 1 9.38 ID 1 860s 2 21.10 ID 2 860s 3 29.80 ID 3 860s 4 11.50 ID 4 860s 5 19.80 ID 5 860s 6 31.20 ID 6 860s 7 10.40 ID 7 860s 8 20.50 ID 8 860s 9 29.80 ID 9 860s 10 10.30 ID 10 860s 11 21.40 ID 11 860s 12 29.40 ID 12 860s 860s Slot "sp": 860s SpatialPoints: 860s x y 860s point1 0 0 860s point2 0 1 860s point3 1 1 860s Coordinate Reference System (CRS) arguments: NA 860s 860s Slot "time": 860s timeIndex 860s 2010-08-05 10:00:00 1 860s 2010-08-05 11:00:00 2 860s 2010-08-05 12:00:00 3 860s 2010-08-05 13:00:00 4 860s 860s Slot "endTime": 860s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 860s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 860s 860s 860s STFDF> stfdf[1:2,] 860s An object of class "STFDF" 860s Slot "data": 860s values ID 860s 1 9.38 ID 1 860s 2 21.10 ID 2 860s 3 11.50 ID 4 860s 4 19.80 ID 5 860s 5 10.40 ID 7 860s 6 20.50 ID 8 860s 7 10.30 ID 10 860s 8 21.40 ID 11 860s 860s Slot "sp": 860s SpatialPoints: 860s x y 860s point1 0 0 860s point2 0 1 860s Coordinate Reference System (CRS) arguments: NA 860s 860s Slot "time": 860s timeIndex 860s 2010-08-05 10:00:00 1 860s 2010-08-05 11:00:00 2 860s 2010-08-05 12:00:00 3 860s 2010-08-05 13:00:00 4 860s 860s Slot "endTime": 860s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 860s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 860s 860s 860s STFDF> stfdf[,1:2] 860s An object of class "STFDF" 860s Slot "data": 860s values ID 860s 1 9.38 ID 1 860s 2 21.10 ID 2 860s 3 29.80 ID 3 860s 4 11.50 ID 4 860s 5 19.80 ID 5 860s 6 31.20 ID 6 860s 860s Slot "sp": 860s SpatialPoints: 860s x y 860s point1 0 0 860s point2 0 1 860s point3 1 1 860s Coordinate Reference System (CRS) arguments: NA 860s 860s Slot "time": 860s timeIndex 860s 2010-08-05 10:00:00 1 860s 2010-08-05 11:00:00 2 860s 860s Slot "endTime": 860s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 860s 860s 860s STFDF> stfdf[,,2] 860s An object of class "STFDF" 860s Slot "data": 860s ID 860s 1 ID 1 860s 2 ID 2 860s 3 ID 3 860s 4 ID 4 860s 5 ID 5 860s 6 ID 6 860s 7 ID 7 860s 8 ID 8 860s 9 ID 9 860s 10 ID 10 860s 11 ID 11 860s 12 ID 12 860s 860s Slot "sp": 860s SpatialPoints: 860s x y 860s point1 0 0 860s point2 0 1 860s point3 1 1 860s Coordinate Reference System (CRS) arguments: NA 860s 860s Slot "time": 860s timeIndex 860s 2010-08-05 10:00:00 1 860s 2010-08-05 11:00:00 2 860s 2010-08-05 12:00:00 3 860s 2010-08-05 13:00:00 4 860s 860s Slot "endTime": 860s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 860s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 860s 860s 860s STFDF> stfdf[,,"values"] 860s An object of class "STFDF" 860s Slot "data": 860s values 860s 1 9.38 860s 2 21.10 860s 3 29.80 860s 4 11.50 860s 5 19.80 860s 6 31.20 860s 7 10.40 860s 8 20.50 860s 9 29.80 860s 10 10.30 860s 11 21.40 860s 12 29.40 860s 860s Slot "sp": 860s SpatialPoints: 860s x y 860s point1 0 0 860s point2 0 1 860s point3 1 1 860s Coordinate Reference System (CRS) arguments: NA 860s 860s Slot "time": 860s timeIndex 860s 2010-08-05 10:00:00 1 860s 2010-08-05 11:00:00 2 860s 2010-08-05 12:00:00 3 860s 2010-08-05 13:00:00 4 860s 860s Slot "endTime": 860s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 860s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 860s 860s 860s STFDF> stfdf[1,] 860s values ID timeIndex 860s 2010-08-05 10:00:00 9.38 ID 1 1 860s 2010-08-05 11:00:00 11.50 ID 4 2 860s 2010-08-05 12:00:00 10.40 ID 7 3 860s 2010-08-05 13:00:00 10.30 ID 10 4 860s 860s STFDF> stfdf[,2] 860s coordinates values ID 860s 1 (0, 0) 11.5 ID 4 860s 2 (0, 1) 19.8 ID 5 860s 3 (1, 1) 31.2 ID 6 860s 860s STFDF> as(stfdf[,,1], "xts") 860s point1 point2 point3 860s 2010-08-05 10:00:00 9.38 21.1 29.8 860s 2010-08-05 11:00:00 11.50 19.8 31.2 860s 2010-08-05 12:00:00 10.40 20.5 29.8 860s 2010-08-05 13:00:00 10.30 21.4 29.4 860s 860s STFDF> as(stfdf[,,2], "xts") 860s point1 point2 point3 860s 2010-08-05 10:00:00 ID 1 ID 2 ID 3 860s 2010-08-05 11:00:00 ID 4 ID 5 ID 6 860s 2010-08-05 12:00:00 ID 7 ID 8 ID 9 860s 2010-08-05 13:00:00 ID 10 ID 11 ID 12 860s 860s STFDF> # examples for [[, [[<-, $ and $<- 860s STFDF> stfdf[[1]] 860s [1] 9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40 860s 860s STFDF> stfdf[["values"]] 860s [1] 9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40 860s 860s STFDF> stfdf[["newVal"]] <- rnorm(12) 860s 860s STFDF> stfdf$ID 860s [1] "ID 1" "ID 2" "ID 3" "ID 4" "ID 5" "ID 6" "ID 7" "ID 8" "ID 9" 860s [10] "ID 10" "ID 11" "ID 12" 860s 860s STFDF> stfdf$ID = paste("OldIDs", 1:12, sep="") 860s 860s STFDF> stfdf$NewID = paste("NewIDs", 12:1, sep="") 860s 860s STFDF> stfdf 860s An object of class "STFDF" 860s Slot "data": 860s values ID newVal NewID 860s 1 9.38 OldIDs1 -0.3125824 NewIDs12 860s 2 21.10 OldIDs2 -1.0536246 NewIDs11 860s 3 29.80 OldIDs3 -0.7188880 NewIDs10 860s 4 11.50 OldIDs4 -1.0525404 NewIDs9 860s 5 19.80 OldIDs5 -0.8441413 NewIDs8 860s 6 31.20 OldIDs6 1.1420848 NewIDs7 860s 7 10.40 OldIDs7 1.9479070 NewIDs6 860s 8 20.50 OldIDs8 -0.4512836 NewIDs5 860s 9 29.80 OldIDs9 0.6695716 NewIDs4 860s 10 10.30 OldIDs10 0.1269003 NewIDs3 860s 11 21.40 OldIDs11 -0.7273297 NewIDs2 860s 12 29.40 OldIDs12 -0.8151803 NewIDs1 860s 860s Slot "sp": 860s SpatialPoints: 860s x y 860s point1 0 0 860s point2 0 1 860s point3 1 1 860s Coordinate Reference System (CRS) arguments: NA 860s 860s Slot "time": 860s timeIndex 860s 2010-08-05 10:00:00 1 860s 2010-08-05 11:00:00 2 860s 2010-08-05 12:00:00 3 860s 2010-08-05 13:00:00 4 860s 860s Slot "endTime": 860s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 860s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 860s 860s 860s STFDF> x = stfdf[stfdf[1:2,],] 860s 860s STFDF> all.equal(x, stfdf[1:2,]) 860s [1] TRUE 860s 860s STFDF> all.equal(stfdf, stfdf[stfdf,]) # converts character to factor... 860s [1] TRUE 860s Loading required package: zoo 860s 860s Attaching package: 'zoo' 860s 860s The following objects are masked from 'package:base': 860s 860s as.Date, as.Date.numeric 860s 860s only the first attribute will used; maybe use merge() first? 860s > 860s BEGIN TEST spatstat.R 860s 860s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 860s Copyright (C) 2024 The R Foundation for Statistical Computing 860s Platform: aarch64-unknown-linux-gnu 860s 860s R is free software and comes with ABSOLUTELY NO WARRANTY. 860s You are welcome to redistribute it under certain conditions. 860s Type 'license()' or 'licence()' for distribution details. 860s 860s R is a collaborative project with many contributors. 860s Type 'contributors()' for more information and 860s 'citation()' on how to cite R or R packages in publications. 860s 860s Type 'demo()' for some demos, 'help()' for on-line help, or 860s 'help.start()' for an HTML browser interface to help. 860s Type 'q()' to quit R. 860s 860s > suppressPackageStartupMessages(library(sf)) 861s > 861s > library(stars) 861s Loading required package: abind 861s > if (suppressPackageStartupMessages(require(spatstat.geom, quietly = TRUE))) { 861s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 861s + s = adrop(read_stars(tif)[,,,1]) > 70 861s + plot(s) 861s + m = as.owin(s) 861s + plot(m) 861s + print(table(m$m)) 861s + } 862s 862s FALSE TRUE 862s 39494 83354 862s > 862s BEGIN TEST stars.R 862s 862s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 862s Copyright (C) 2024 The R Foundation for Statistical Computing 862s Platform: aarch64-unknown-linux-gnu 862s 862s R is free software and comes with ABSOLUTELY NO WARRANTY. 862s You are welcome to redistribute it under certain conditions. 862s Type 'license()' or 'licence()' for distribution details. 862s 862s R is a collaborative project with many contributors. 862s Type 'contributors()' for more information and 862s 'citation()' on how to cite R or R packages in publications. 862s 862s Type 'demo()' for some demos, 'help()' for on-line help, or 862s 'help.start()' for an HTML browser interface to help. 862s Type 'q()' to quit R. 862s 862s > Sys.setenv(TZ="UTC") 862s > suppressPackageStartupMessages(library(stars)) 863s > set.seed(13521) # runif 863s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 863s > (x_ = read_stars(c(tif,tif))) # FIXME: not what you'd expect 863s stars object with 3 dimensions and 2 attributes 863s attribute(s): 863s Min. 1st Qu. Median Mean 3rd Qu. Max. 863s L7_ETMs.tif 1 54 69 68.91242 86 255 863s L7_ETMs.tif.1 1 54 69 68.91242 86 255 863s dimension(s): 863s from to offset delta refsys point x/y 863s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 863s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 863s band 1 6 NA NA NA NA 863s > (x = read_stars(tif)) 863s stars object with 3 dimensions and 1 attribute 863s attribute(s): 863s Min. 1st Qu. Median Mean 3rd Qu. Max. 863s L7_ETMs.tif 1 54 69 68.91242 86 255 863s dimension(s): 863s from to offset delta refsys point x/y 863s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 863s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 863s band 1 6 NA NA NA NA 863s > # image(x) 863s > gdal_crs(tif) 863s Coordinate Reference System: 863s User input: PROJCS["SIRGAS 2000 / UTM zone 25S",GEOGCS["SIRGAS 2000",DATUM["Sistema_de_Referencia_Geocentrico_para_las_AmericaS_2000",SPHEROID["GRS 1980",6378137,298.257222101,AUTHORITY["EPSG","7019"]],AUTHORITY["EPSG","6674"]],PRIMEM["Greenwich",0,AUTHORITY["EPSG","8901"]],UNIT["degree",0.0174532925199433,AUTHORITY["EPSG","9122"]],AUTHORITY["EPSG","4674"]],PROJECTION["Transverse_Mercator"],PARAMETER["latitude_of_origin",0],PARAMETER["central_meridian",-33],PARAMETER["scale_factor",0.9996],PARAMETER["false_easting",500000],PARAMETER["false_northing",10000000],UNIT["metre",1,AUTHORITY["EPSG","9001"]],AXIS["Easting",EAST],AXIS["Northing",NORTH],AUTHORITY["EPSG","31985"]] 863s wkt: 863s PROJCRS["SIRGAS 2000 / UTM zone 25S", 863s BASEGEOGCRS["SIRGAS 2000", 863s DATUM["Sistema de Referencia Geocentrico para las AmericaS 2000", 863s ELLIPSOID["GRS 1980",6378137,298.257222101, 863s LENGTHUNIT["metre",1]]], 863s PRIMEM["Greenwich",0, 863s ANGLEUNIT["degree",0.0174532925199433]], 863s ID["EPSG",4674]], 863s CONVERSION["UTM zone 25S", 863s METHOD["Transverse Mercator", 863s ID["EPSG",9807]], 863s PARAMETER["Latitude of natural origin",0, 863s ANGLEUNIT["degree",0.0174532925199433], 863s ID["EPSG",8801]], 863s PARAMETER["Longitude of natural origin",-33, 863s ANGLEUNIT["degree",0.0174532925199433], 863s ID["EPSG",8802]], 863s PARAMETER["Scale factor at natural origin",0.9996, 863s SCALEUNIT["unity",1], 863s ID["EPSG",8805]], 863s PARAMETER["False easting",500000, 863s LENGTHUNIT["metre",1], 863s ID["EPSG",8806]], 863s PARAMETER["False northing",10000000, 863s LENGTHUNIT["metre",1], 863s ID["EPSG",8807]]], 863s CS[Cartesian,2], 863s AXIS["easting",east, 863s ORDER[1], 863s LENGTHUNIT["metre",1]], 863s AXIS["northing",north, 863s ORDER[2], 863s LENGTHUNIT["metre",1]], 863s ID["EPSG",31985]] 863s > plot(x) 864s > plot(x, join_zlim = FALSE) 864s > x %>% st_set_dimensions(names = c('a', 'b', 'c')) 864s stars object with 3 dimensions and 1 attribute 864s attribute(s): 864s Min. 1st Qu. Median Mean 3rd Qu. Max. 864s L7_ETMs.tif 1 54 69 68.91242 86 255 864s dimension(s): 864s from to offset delta refsys point x/y 864s a 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 864s b 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 864s c 1 6 NA NA NA NA 864s > st_get_dimension_values(x, 3) 864s [1] 1 2 3 4 5 6 864s > 864s > (x1 = st_set_dimensions(x, "band", values = c(1,2,3,4,5,7), names = "band_number", point = TRUE)) 864s stars object with 3 dimensions and 1 attribute 864s attribute(s): 864s Min. 1st Qu. Median Mean 3rd Qu. Max. 864s L7_ETMs.tif 1 54 69 68.91242 86 255 864s dimension(s): 864s from to offset delta refsys point values x/y 864s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 864s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 864s band_number 1 6 NA NA NA TRUE 1,...,7 864s > rbind(c(0.45,0.515), c(0.525,0.605), c(0.63,0.69), c(0.775,0.90), c(1.55,1.75), c(2.08,2.35)) %>% 864s + units::set_units(um) -> bw # units::set_units(µm) -> bw 864s > # set bandwidth midpoint: 864s > (x2 = st_set_dimensions(x, "band", values = 0.5 * (bw[,1]+bw[,2]), 864s + names = "bandwidth_midpoint", point = TRUE)) 864s stars object with 3 dimensions and 1 attribute 864s attribute(s): 864s Min. 1st Qu. Median Mean 3rd Qu. Max. 864s L7_ETMs.tif 1 54 69 68.91242 86 255 864s dimension(s): 864s from to offset delta refsys point 864s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 864s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 864s bandwidth_midpoint 1 6 NA NA udunits TRUE 864s values x/y 864s x NULL [x] 864s y NULL [y] 864s bandwidth_midpoint 0.4825 [um],...,2.215 [um] 864s > # set bandwidth intervals: 864s > (x3 = st_set_dimensions(x, "band", values = make_intervals(bw), names = "bandwidth")) 864s stars object with 3 dimensions and 1 attribute 864s attribute(s): 865s Min. 1st Qu. Median Mean 3rd Qu. Max. 865s L7_ETMs.tif 1 54 69 68.91242 86 255 865s dimension(s): 865s from to offset delta refsys point 865s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 865s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 865s bandwidth 1 6 NA NA udunits NA 865s values x/y 865s x NULL [x] 865s y NULL [y] 865s bandwidth [0.45,0.515) [um],...,[2.08,2.35) [um] 865s > 865s > x + x 865s stars object with 3 dimensions and 1 attribute 865s attribute(s): 865s Min. 1st Qu. Median Mean 3rd Qu. Max. 865s L7_ETMs.tif 2 108 138 137.8248 172 510 865s dimension(s): 865s from to offset delta refsys point x/y 865s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 865s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 865s band 1 6 NA NA NA NA 865s > x * x 865s stars object with 3 dimensions and 1 attribute 865s attribute(s): 865s Min. 1st Qu. Median Mean 3rd Qu. Max. 865s L7_ETMs.tif 1 2916 4761 5512.41 7396 65025 865s dimension(s): 865s from to offset delta refsys point x/y 865s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 865s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 865s band 1 6 NA NA NA NA 865s > x[,,,1:3] 865s stars object with 3 dimensions and 1 attribute 865s attribute(s): 865s Min. 1st Qu. Median Mean 3rd Qu. Max. 865s L7_ETMs.tif 21 58 70 70.36041 83 255 865s dimension(s): 865s from to offset delta refsys point x/y 865s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 865s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 865s band 1 3 NA NA NA NA 865s > x[,1:100,100:200,] 865s stars object with 3 dimensions and 1 attribute 865s attribute(s): 865s Min. 1st Qu. Median Mean 3rd Qu. Max. 865s L7_ETMs.tif 13 54 65 67.21531 77 252 865s dimension(s): 865s from to offset delta refsys point x/y 865s x 1 100 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 865s y 100 200 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 865s band 1 6 NA NA NA NA 865s > sqrt(x) 865s stars object with 3 dimensions and 1 attribute 865s attribute(s): 865s Min. 1st Qu. Median Mean 3rd Qu. Max. 865s L7_ETMs.tif 1 7.348469 8.306624 8.094006 9.273618 15.96872 865s dimension(s): 865s from to offset delta refsys point x/y 865s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 865s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 865s band 1 6 NA NA NA NA 865s > st_apply(x, 3, min) 865s stars object with 1 dimensions and 1 attribute 865s attribute(s): 865s Min. 1st Qu. Median Mean 3rd Qu. Max. 865s min 1 3 15 18.5 29.25 47 865s dimension(s): 865s from to 865s band 1 6 865s > st_apply(x, 1:2, max) 865s stars object with 2 dimensions and 1 attribute 865s attribute(s): 865s Min. 1st Qu. Median Mean 3rd Qu. Max. 865s max 55 85 96 99.36018 113 255 865s dimension(s): 865s from to offset delta refsys point x/y 865s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 865s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 865s > st_apply(x, 1:2, range) 866s stars object with 3 dimensions and 1 attribute 866s attribute(s): 866s Min. 1st Qu. Median Mean 3rd Qu. Max. 866s L7_ETMs.tif 1 50 71 72.43565 96 255 866s dimension(s): 866s from to offset delta refsys point x/y 866s range 1 2 NA NA NA NA 866s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 866s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 866s > 866s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 866s > x = read_stars(geomatrix) 866s > y = st_transform(x, st_crs(4326)) 866s > st_coordinates(x)[1:2,] 866s x y 866s 1 1841000 1144000 866s 2 1841002 1143995 866s > 866s > nc = system.file("nc/tos_O1_2001-2002.nc", package = "stars") 866s > if (nc != "" && require(PCICt, quietly = TRUE)) { 866s + print(x <- read_stars(nc)) 866s + print(st_bbox(x)) 866s + s = st_as_stars(st_bbox(x)) # inside = NA 866s + print(st_bbox(s)) 866s + s = st_as_stars(st_bbox(x), inside = TRUE) 866s + print(st_bbox(s)) 866s + s = st_as_stars(st_bbox(x), inside = FALSE) 866s + print(st_bbox(s)) 866s + (s = st_as_stars(st_bbox(x), dy = 1)) 866s + print(st_bbox(s)) 866s + print(identical(st_as_stars(st_bbox(x), dx = 1), st_as_stars(st_bbox(x), dy = 1))) 866s + s = st_as_stars(st_bbox(x), dx = 10) 866s + print(st_bbox(s)) 866s + s = st_as_stars(st_bbox(x), dx = 20) 866s + print(st_bbox(s)) 866s + x1 = x 866s + st_crs(x1) = "OGC:CRS84" 866s + print(identical(st_as_stars(st_bbox(x1), dx = 1), st_as_stars(st_bbox(x1), dx = units::set_units(1, degree)))) 866s + 866s + df = as.data.frame(x) 866s + if (require(units, quietly = TRUE)) 866s + print(units::drop_units(x)) 866s + 866s + print(dimnames(x)) 866s + dimnames(x) <- letters[1:3] 866s + print(dimnames(x)) 866s + } # PCICt 866s > 866s > st_as_stars() 866s stars object with 2 dimensions and 1 attribute 866s attribute(s): 866s Min. 1st Qu. Median Mean 3rd Qu. Max. 866s values 0 0 0 0 0 0 866s dimension(s): 866s from to offset delta refsys x/y 866s x 1 360 -180 1 WGS 84 (CRS84) [x] 866s y 1 180 90 -1 WGS 84 (CRS84) [y] 866s > 866s > # multiple sub-datasets: 866s > nc_red = system.file("nc/reduced.nc", package = "stars") 866s > red = read_stars(nc_red) 866s sst, anom, err, ice, 866s > red 866s stars object with 4 dimensions and 4 attributes 866s attribute(s): 866s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 866s sst [degree_Celsius] -1.80 -0.03 13.655 12.9940841 24.8125 32.97 4448 866s anom [degree_Celsius] -10.16 -0.58 -0.080 -0.1855812 0.2100 2.99 4448 866s err [degree_Celsius] 0.11 0.16 0.270 0.2626872 0.3200 0.84 4448 866s ice [percent] 0.01 0.47 0.920 0.7178118 0.9600 1.00 13266 866s dimension(s): 866s from to offset delta refsys x/y 866s x 1 180 -1 2 NA [x] 866s y 1 90 90 -2 NA [y] 866s zlev 1 1 0 [m] NA NA 866s time 1 1 1981-12-31 UTC NA POSIXct 866s > plot(red) 866s > 866s > x = st_xy2sfc(read_stars(tif)[,1:10,1:10,], as_points = FALSE) 866s > st_bbox(x) 866s xmin ymin xmax ymax 866s 288776.3 9120475.8 289061.3 9120760.8 866s > x = read_stars(tif) 866s > merge(split(x, "band")) 867s stars object with 3 dimensions and 1 attribute 867s attribute(s): 867s Min. 1st Qu. Median Mean 3rd Qu. Max. 867s X1.X2.X3.X4.X5.X6 1 54 69 68.91242 86 255 867s dimension(s): 867s from to offset delta refsys point values 867s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 867s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 867s attributes 1 6 NA NA NA NA X1,...,X6 867s x/y 867s x [x] 867s y [y] 867s attributes 867s > 867s > read_stars(c(tif,tif)) # merges as attributes 867s stars object with 3 dimensions and 2 attributes 867s attribute(s): 867s Min. 1st Qu. Median Mean 3rd Qu. Max. 867s L7_ETMs.tif 1 54 69 68.91242 86 255 867s L7_ETMs.tif.1 1 54 69 68.91242 86 255 867s dimension(s): 868s from to offset delta refsys point x/y 868s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 868s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 868s band 1 6 NA NA NA NA 868s > read_stars(c(tif,tif), along = "sensor") 868s stars object with 4 dimensions and 1 attribute 868s attribute(s), summary of first 1e+05 cells: 868s Min. 1st Qu. Median Mean 3rd Qu. Max. 868s L7_ETMs.tif 47 65 76 77.3419 87 255 868s dimension(s): 868s from to offset delta refsys point x/y 868s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 868s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 868s band 1 6 NA NA NA NA 868s sensor 1 2 NA NA NA NA 868s > read_stars(c(tif,tif), along = 4) 868s stars object with 4 dimensions and 1 attribute 868s attribute(s), summary of first 1e+05 cells: 868s Min. 1st Qu. Median Mean 3rd Qu. Max. 868s L7_ETMs.tif 47 65 76 77.3419 87 255 868s dimension(s): 868s from to offset delta refsys point x/y 868s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 868s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 868s band 1 6 NA NA NA NA 868s new_dim 1 2 NA NA NA NA 868s > read_stars(c(tif,tif), along = "band") 868s stars object with 3 dimensions and 1 attribute 868s attribute(s), summary of first 1e+05 cells: 868s Min. 1st Qu. Median Mean 3rd Qu. Max. 868s L7_ETMs.tif 47 65 76 77.3419 87 255 868s dimension(s): 868s from to offset delta refsys point x/y 868s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 868s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 868s band 1 12 NA NA NA NA 868s > read_stars(c(tif,tif), along = 3) 868s stars object with 3 dimensions and 1 attribute 868s attribute(s), summary of first 1e+05 cells: 868s Min. 1st Qu. Median Mean 3rd Qu. Max. 868s L7_ETMs.tif 47 65 76 77.3419 87 255 868s dimension(s): 868s from to offset delta refsys point x/y 868s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 868s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 868s band 1 12 NA NA NA NA 868s > 868s > # cut: 868s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 868s > x = read_stars(tif) 868s > cut(x, c(0, 50, 100, 255)) 868s stars object with 3 dimensions and 1 attribute 868s attribute(s): 868s L7_ETMs.tif 868s (0,50] :156060 868s (50,100] :503764 868s (100,255]: 77264 868s dimension(s): 868s from to offset delta refsys point x/y 868s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 868s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 868s band 1 6 NA NA NA NA 868s > cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255)) 868s stars object with 2 dimensions and 1 attribute 868s attribute(s): 868s L7_ETMs.tif 868s (0,50] : 1 868s (50,100] :117134 868s (100,255]: 5713 868s dimension(s): 868s from to offset delta refsys point x/y 868s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 868s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 868s > plot(cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255))) 868s > 868s > st_bbox(st_dimensions(x)) 868s xmin ymin xmax ymax 868s 288776.3 9110728.8 298722.8 9120760.8 868s > x[x < 0] = NA 868s > x[is.na(x)] = 0 868s > 868s > # c: 868s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata") 868s > if (FALSE && f != "") { 868s + files = c("avhrr-only-v2.19810901.nc", 868s + "avhrr-only-v2.19810902.nc", 868s + "avhrr-only-v2.19810903.nc", 868s + "avhrr-only-v2.19810904.nc", 868s + "avhrr-only-v2.19810905.nc", 868s + "avhrr-only-v2.19810906.nc", 868s + "avhrr-only-v2.19810907.nc", 868s + "avhrr-only-v2.19810908.nc", 868s + "avhrr-only-v2.19810909.nc") 868s + l = list() 868s + for (f in files) { 868s + from = system.file(paste0("netcdf/", f), package = "starsdata") 868s + l[[f]] = read_stars(from, sub = c("sst", "anom")) 868s + } 868s + ret = do.call(c, l) 868s + print(ret) 868s + ret = adrop(c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2))) 868s + print(ret) 868s + #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times"))) 868s + #print(ret) 868s + } 868s > 868s > st_dimensions(list(matrix(1, 4, 4))) # st_dimensions.default 868s from to point values 868s X1 1 1 FALSE 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1 868s > 868s > if (FALSE && require("starsdata", quietly = TRUE)) { 868s + # curvilinear: 868s + s5p = system.file( 868s + "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", 868s + package = "starsdata") 868s + print(s5p) 868s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") 868s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") 868s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") 868s + lat = read_stars(lat_ds) 868s + lon = read_stars(lon_ds) 868s + nit = read_stars(nit_ds) 868s + nit[[1]][nit[[1]] > 9e+36] = NA 868s + 868s + ll = setNames(c(lon, lat), c("x", "y")) 868s + nit.c = st_as_stars(nit, curvilinear = ll) 868s + print(nit.c) 868s + 868s + s5p = system.file( 868s + "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", 868s + package = "starsdata") 868s + nit.c2 = read_stars(s5p, 868s + sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 868s + curvilinear = c("//PRODUCT/latitude", "//PRODUCT/longitude")) 868s + print(all.equal(nit.c, nit.c2)) 868s + } 868s > 868s BEGIN TEST subset.R 869s 869s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 869s Copyright (C) 2024 The R Foundation for Statistical Computing 869s Platform: aarch64-unknown-linux-gnu 869s 869s R is free software and comes with ABSOLUTELY NO WARRANTY. 869s You are welcome to redistribute it under certain conditions. 869s Type 'license()' or 'licence()' for distribution details. 869s 869s R is a collaborative project with many contributors. 869s Type 'contributors()' for more information and 869s 'citation()' on how to cite R or R packages in publications. 869s 869s Type 'demo()' for some demos, 'help()' for on-line help, or 869s 'help.start()' for an HTML browser interface to help. 869s Type 'q()' to quit R. 869s 869s > suppressPackageStartupMessages(library(stars)) 869s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 869s > x = read_stars(tif) 869s > y = st_set_dimensions(x, "band", point = TRUE) 869s > y[,1:10, 1:10, c(1,4,3,2)] 869s stars object with 3 dimensions and 1 attribute 869s attribute(s): 869s Min. 1st Qu. Median Mean 3rd Qu. Max. 869s L7_ETMs.tif 25 45 57 56.535 64 97 869s dimension(s): 869s from to offset delta refsys point values x/y 869s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 869s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 869s band 1 4 NA NA NA TRUE 1,...,2 869s > y = st_set_dimensions(x, "band", point = NA) 869s > y[,1:10, 1:10, c(1,4,3,2)] 869s stars object with 3 dimensions and 1 attribute 869s attribute(s): 869s Min. 1st Qu. Median Mean 3rd Qu. Max. 869s L7_ETMs.tif 25 45 57 56.535 64 97 869s dimension(s): 869s from to offset delta refsys point values x/y 869s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 869s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 869s band 1 4 NA NA NA NA [1,2),...,[2,3) 869s > y = st_set_dimensions(x, "band", point = FALSE) 869s > y[,1:10, 1:10, c(1,4,3,2)] 869s stars object with 3 dimensions and 1 attribute 869s attribute(s): 869s Min. 1st Qu. Median Mean 3rd Qu. Max. 869s L7_ETMs.tif 25 45 57 56.535 64 97 869s dimension(s): 869s from to offset delta refsys point values x/y 869s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 869s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 869s band 1 4 NA NA NA FALSE [1,2),...,[2,3) 869s > y = st_set_dimensions(x, "band", values = letters[1:6]) 869s > y[,1:10, 1:10, c(1,4,3,2)] 869s stars object with 3 dimensions and 1 attribute 869s attribute(s): 869s Min. 1st Qu. Median Mean 3rd Qu. Max. 869s L7_ETMs.tif 25 45 57 56.535 64 97 869s dimension(s): 869s from to offset delta refsys point values x/y 869s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 869s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 869s band 1 4 NA NA NA NA a,...,b 869s > y = st_set_dimensions(x, "band", values = letters[1:6], point = NA) 869s > y[,1:10, 1:10, c(1,4,3,2)] 869s stars object with 3 dimensions and 1 attribute 869s attribute(s): 869s Min. 1st Qu. Median Mean 3rd Qu. Max. 869s L7_ETMs.tif 25 45 57 56.535 64 97 869s dimension(s): 869s from to offset delta refsys point values x/y 869s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 869s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 869s band 1 4 NA NA NA NA a,...,b 869s > y = st_set_dimensions(x, "band", values = letters[1:6], point = TRUE) 869s > y[,1:10, 1:10, c(1,4,3,2)] 869s stars object with 3 dimensions and 1 attribute 869s attribute(s): 869s Min. 1st Qu. Median Mean 3rd Qu. Max. 869s L7_ETMs.tif 25 45 57 56.535 64 97 869s dimension(s): 870s from to offset delta refsys point values x/y 870s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 870s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 870s band 1 4 NA NA NA TRUE a,...,b 870s > 870s BEGIN TEST testthat.R 870s 870s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 870s Copyright (C) 2024 The R Foundation for Statistical Computing 870s Platform: aarch64-unknown-linux-gnu 870s 870s R is free software and comes with ABSOLUTELY NO WARRANTY. 870s You are welcome to redistribute it under certain conditions. 870s Type 'license()' or 'licence()' for distribution details. 870s 870s R is a collaborative project with many contributors. 870s Type 'contributors()' for more information and 870s 'citation()' on how to cite R or R packages in publications. 870s 870s Type 'demo()' for some demos, 'help()' for on-line help, or 870s 'help.start()' for an HTML browser interface to help. 870s Type 'q()' to quit R. 870s 870s > ## load dependencies 870s > library(testthat) 870s > suppressPackageStartupMessages(library(stars)) 870s > 870s > ## test package 870s > test_check("stars") 877s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ] 877s 877s == Skipped tests (5) =========================================================== 877s * On CRAN (4): 'test-OpenStreetMap.R:2:3', 'test-ncdf.R:1:1', 877s 'test-ncproxy.R:1:1', 'test-rectilinear.R:89:3' 877s * {cubble} is not installed (1): 'test-cubble.R:2:3' 877s 877s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ] 877s > 877s BEGIN TEST tidy.R 877s 877s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 877s Copyright (C) 2024 The R Foundation for Statistical Computing 877s Platform: aarch64-unknown-linux-gnu 877s 877s R is free software and comes with ABSOLUTELY NO WARRANTY. 877s You are welcome to redistribute it under certain conditions. 877s Type 'license()' or 'licence()' for distribution details. 877s 877s R is a collaborative project with many contributors. 877s Type 'contributors()' for more information and 877s 'citation()' on how to cite R or R packages in publications. 877s 877s Type 'demo()' for some demos, 'help()' for on-line help, or 877s 'help.start()' for an HTML browser interface to help. 877s Type 'q()' to quit R. 877s 877s > suppressPackageStartupMessages(library(stars)) 877s > 877s > if (require(dplyr, quietly = TRUE)) { 877s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 877s + x <- read_stars(tif) 877s + (y <- x %>% select(L7_ETMs.tif)) 877s + (y <- x %>% filter(band > 2)) 877s + (z <- x %>% mutate(foo = 2* L7_ETMs.tif)) 877s + x %>% pull(L7_ETMs.tif) %>% class() 877s + x %>% filter(x > 289900) 877s + x %>% slice("x", 50:100) 877s + 877s + suppressPackageStartupMessages(library(ggplot2)) 877s + ggplot() + geom_stars(data = x) + coord_equal() + facet_wrap(~band) 877s + ggplot() + geom_stars(data = x[,c(1:50,52:100),c(1:45, 50:60)]) + 877s + coord_equal() 877s + ggplot() + geom_stars(data = x[,1:10,1:10,1:2], sf = TRUE) + facet_wrap(~band) 877s + 877s + 877s + # see https://github.com/r-spatial/stars/issues/539 : 877s + x <- read_stars(system.file("tif/L7_ETMs.tif", package = "stars")) 877s + y <- transmute(x, L7_ETMs.tif = units::set_units(L7_ETMs.tif, degree_C)) # same as x but with units 877s + 877s + x - slice(x, 'band', 1) # runs as expected, recycling the second object 877s + try(y - slice(x, 'band', 1)) # fails as expected because x is unitless 877s + try(x - slice(y, 'band', 1)) # fails as expected 877s + y - slice(y, 'band', 1) # runs as expected 877s + } 878s 878s Attaching package: 'dplyr' 878s 878s The following objects are masked from 'package:stats': 878s 878s filter, lag 878s 878s The following objects are masked from 'package:base': 878s 878s intersect, setdiff, setequal, union 878s 878s Error in Ops.units(X[[i]], ...) : 878s both operands of the expression should be "units" objects 878s Error in Ops.units(X[[i]], ...) : 878s both operands of the expression should be "units" objects 878s stars object with 3 dimensions and 1 attribute 878s attribute(s): 878s Min. 1st Qu. Median Mean 3rd Qu. Max. 878s L7_ETMs.tif [degree_Celsius] -184 -19 -8 -10.2353 0 131 878s dimension(s): 878s from to offset delta refsys point x/y 878s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 878s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 878s band 1 6 NA NA NA NA 878s > 878s BEGIN TEST transform.R 878s 878s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 878s Copyright (C) 2024 The R Foundation for Statistical Computing 878s Platform: aarch64-unknown-linux-gnu 878s 878s R is free software and comes with ABSOLUTELY NO WARRANTY. 878s You are welcome to redistribute it under certain conditions. 878s Type 'license()' or 'licence()' for distribution details. 878s 878s R is a collaborative project with many contributors. 878s Type 'contributors()' for more information and 878s 'citation()' on how to cite R or R packages in publications. 878s 878s Type 'demo()' for some demos, 'help()' for on-line help, or 878s 'help.start()' for an HTML browser interface to help. 878s Type 'q()' to quit R. 878s 878s > suppressPackageStartupMessages(library(stars)) 879s > #suppressPackageStartupMessages(library(lwgeom)) 879s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 879s > (x = read_stars(geomatrix)) 879s stars object with 2 dimensions and 1 attribute 879s attribute(s): 879s Min. 1st Qu. Median Mean 3rd Qu. Max. 879s geomatrix.tif 74 107 123 126.765 132 255 879s dimension(s): 879s from to offset delta refsys point x/y 879s x 1 20 1841002 1.5 WGS 84 / UTM zone 11N TRUE [x] 879s y 1 20 1144003 -1.5 WGS 84 / UTM zone 11N TRUE [y] 879s sheared raster with parameters: -5 -5 879s > new = st_crs(4326) 879s > y = st_transform(x, new) 879s > plot(st_transform(st_as_sfc(st_bbox(x)), new), col = NA, border = 'red') 879s > plot(st_as_sfc(y, as_points=FALSE), col = NA, border = 'green', axes = TRUE, add = TRUE) 879s > image(y, add = TRUE) 879s > plot(st_as_sfc(y, as_points=TRUE), pch=3, cex=.5, col = 'blue', add = TRUE) 879s > plot(st_transform(st_as_sfc(x, as_points=FALSE), new), add = TRUE) 879s > 879s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 879s > x = read_stars(tif)[,1:10,1:10,1:3] 879s > x_ = st_transform(x, st_crs(4326)) 879s > ## IGNORE_RDIFF_BEGIN 879s > if (require(lwgeom, quietly = TRUE)) { 879s + x__ = st_transform_proj(x, st_crs(4326)$proj4string) 879s + st_crs(x_) = st_crs(x__) 879s + print(all.equal(x_,x__)) 879s + 879s + # x__ = st_transform(x, x_) #now in st_warp 879s + # all.equal(x_, x__) 879s + 879s + x = st_xy2sfc(x, as_points = FALSE) 879s + (x_ = st_transform(x, st_crs(4326))) 879s + (x__ = st_transform_proj(x, st_crs(4326))) 879s + print(all.equal(x_,x__,check.attributes = FALSE)) 879s + } 879s Linking to liblwgeom 3.0.0beta1 r16016, GEOS 3.13.0, PROJ 9.5.1 879s 879s Attaching package: 'lwgeom' 879s 879s The following object is masked from 'package:sf': 879s 879s st_perimeter 879s 879s [1] TRUE 879s [1] TRUE 879s > ## IGNORE_RDIFF_END 879s > 879s > # nothing to transform: now errs: 879s Error in st_transform.stars(st_as_stars(list(m = matrix(1, 10, 10))), : 879s !is.na(st_crs(x)) is not TRUE 879s Error in st_transform_proj.stars(st_as_stars(list(m = matrix(1, 10, 10))), : 879s !is.na(st_crs(x)) is not TRUE 879s > try(st_transform(st_as_stars(list(m = matrix(1,10,10))), st_crs(4326))) 879s > try(st_transform_proj(st_as_stars(list(m = matrix(1,10,10))), st_crs(4326))) 879s > 879s BEGIN TEST warp.R 879s 879s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 879s Copyright (C) 2024 The R Foundation for Statistical Computing 879s Platform: aarch64-unknown-linux-gnu 879s 879s R is free software and comes with ABSOLUTELY NO WARRANTY. 879s You are welcome to redistribute it under certain conditions. 879s Type 'license()' or 'licence()' for distribution details. 879s 879s R is a collaborative project with many contributors. 879s Type 'contributors()' for more information and 879s 'citation()' on how to cite R or R packages in publications. 879s 879s Type 'demo()' for some demos, 'help()' for on-line help, or 879s 'help.start()' for an HTML browser interface to help. 879s Type 'q()' to quit R. 879s 879s > suppressPackageStartupMessages(library(stars)) 880s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 880s > x = read_stars(geomatrix) 880s > # can stars reproduce what gdal does, by default? 880s > x2 = st_warp(x, use_gdal = TRUE, no_data_value = -9999) 880s > y = st_warp(x, x2) 880s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE) } 880s > if (interactive()) { plot(y, breaks = "equal", axes=TRUE) } 880s > names(x2) = names(y) 880s > all.equal(x2, y) # yes? 880s [1] TRUE 880s > 880s > # does gdal reproduce with stars template object? 880s > (x2 = setNames(st_warp(x, y, use_gdal = TRUE, no_data_value=-1), "file.tif")) 880s stars object with 2 dimensions and 1 attribute 880s attribute(s): 880s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 880s file.tif 74 115 123 126.4289 132 255 224 880s dimension(s): 880s from to offset delta refsys point x/y 880s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N FALSE [x] 880s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y] 880s > 880s > # does gdal reproduce what stars does, default cell size? 880s > (x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE)) 880s stars object with 2 dimensions and 1 attribute 880s attribute(s): 880s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 880s geomatrix.tif 74 115 123 126.4289 132 255 224 880s dimension(s): 880s from to offset delta refsys x/y 880s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N [x] 880s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N [y] 880s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif")) 880s stars object with 2 dimensions and 1 attribute 880s attribute(s): 880s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 880s file.tif 74 115 123 126.4289 132 255 224 880s dimension(s): 880s from to offset delta refsys point x/y 880s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N FALSE [x] 880s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y] 880s > 880s > # try with multiple bands: 880s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 880s > (x1 = read_stars(tif)) 880s stars object with 3 dimensions and 1 attribute 880s attribute(s): 880s Min. 1st Qu. Median Mean 3rd Qu. Max. 880s L7_ETMs.tif 1 54 69 68.91242 86 255 880s dimension(s): 880s from to offset delta refsys point x/y 880s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 880s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 880s band 1 6 NA NA NA NA 880s > tifcp = tempfile(fileext = ".tif") 880s > file.copy(tif, tifcp) 880s [1] TRUE 880s > x1p = read_stars(tifcp, proxy = TRUE) 880s > st_dimensions(x1p) 880s from to offset delta refsys point x/y 880s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 880s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 880s band 1 6 NA NA NA NA 880s > (x1a = st_warp(x1, crs = st_crs(4326))) 880s stars object with 3 dimensions and 1 attribute 880s attribute(s): 881s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 881s L7_ETMs.tif 1 54 69 68.93072 86 255 8778 881s dimension(s): 881s from to offset delta refsys x/y 881s x 1 350 -34.92 0.0002592 WGS 84 [x] 881s y 1 352 -7.95 -0.0002592 WGS 84 [y] 881s band 1 6 NA NA NA 881s > (x1b = setNames(st_warp(x1, x1p, use_gdal = TRUE, no_data_value=-1), "file.tif")) 881s stars object with 3 dimensions and 1 attribute 881s attribute(s): 881s Min. 1st Qu. Median Mean 3rd Qu. Max. 881s file.tif 1 54 69 68.91242 86 255 881s dimension(s): 881s from to offset delta refsys point x/y 881s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 881s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 881s band 1 6 NA NA NA NA 881s > 881s > # does gdal reproduce what stars does? Smaller grid: 881s > x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE, cellsize = 3) 881s > # x2 = x2[,2:43,2:43] 881s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE, reset = FALSE) } 881s > if (interactive()) { plot(st_as_sfc(st_bbox(x2)), add = TRUE, col = NA, border = 'red') } 881s > ### doesn't work: FIXME: check with more recent GDAL: 881s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif")) 881s stars object with 2 dimensions and 1 attribute 881s attribute(s): 881s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 881s file.tif 74 107 123 126.6584 132 255 727 881s dimension(s): 881s from to offset delta refsys point x/y 881s x 1 44 1840902 3 WGS 84 / UTM zone 11N FALSE [x] 881s y 1 44 1144003 -3 WGS 84 / UTM zone 11N FALSE [y] 881s > if (interactive()) { plot(y, breaks = "equal") } 881s > names(x2) = names(y) 881s > # isTRUE(all.equal(x2, y, check.attributes=FALSE)) 881s > m = mean(as.vector(x2[[1]]==y[[1]]), na.rm = TRUE) 881s > u = unique(as.vector(x2[[1]]-y[[1]])) 881s > 881s > g = st_as_stars() 881s > attr(g, "dimensions")$x$offset = 0 881s > g$values = as.vector(t(matrix(seq_len(prod(dim(g))), 180, 360))) 881s > if (interactive()) { plot(g, axes=TRUE) } 881s > a = st_warp(g, st_as_stars(), use_gdal=FALSE) 881s > b = st_warp(g, st_as_stars(), use_gdal=TRUE, no_data_value = -1) 881s > all.equal(a, b, check.attributes = FALSE) 881s [1] TRUE 881s > 881s BEGIN TEST write.R 881s 881s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 881s Copyright (C) 2024 The R Foundation for Statistical Computing 881s Platform: aarch64-unknown-linux-gnu 881s 881s R is free software and comes with ABSOLUTELY NO WARRANTY. 881s You are welcome to redistribute it under certain conditions. 881s Type 'license()' or 'licence()' for distribution details. 881s 881s R is a collaborative project with many contributors. 881s Type 'contributors()' for more information and 881s 'citation()' on how to cite R or R packages in publications. 881s 881s Type 'demo()' for some demos, 'help()' for on-line help, or 881s 'help.start()' for an HTML browser interface to help. 881s Type 'q()' to quit R. 881s 881s > suppressPackageStartupMessages(library(stars)) 882s > 882s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 882s > (x = read_stars(tif)) 882s stars object with 3 dimensions and 1 attribute 882s attribute(s): 882s Min. 1st Qu. Median Mean 3rd Qu. Max. 882s L7_ETMs.tif 1 54 69 68.91242 86 255 882s dimension(s): 882s from to offset delta refsys point x/y 882s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 882s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 882s band 1 6 NA NA NA NA 882s > 882s > # write stars object: 882s > write_stars(x, tempfile(), driver = "GTiff") 882s > 882s > # write stars_proxy object: 882s > (x = read_stars(tif, proxy = TRUE)) 882s stars_proxy object with 1 attribute in 1 file(s): 882s $L7_ETMs.tif 882s [1] "[...]/L7_ETMs.tif" 882s 882s dimension(s): 882s from to offset delta refsys point x/y 882s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 882s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 882s band 1 6 NA NA NA NA 882s > write_stars(x, tempfile(), driver = "GTiff") 882s 882s > 882s autopkgtest [19:15:52]: test run-unit-test: -----------------------] 883s run-unit-test PASS 883s autopkgtest [19:15:53]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 884s autopkgtest [19:15:54]: test pkg-r-autopkgtest: preparing testbed 1019s autopkgtest [19:18:09]: testbed dpkg architecture: arm64 1020s autopkgtest [19:18:10]: testbed apt version: 2.9.18 1020s autopkgtest [19:18:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1021s autopkgtest [19:18:11]: testbed release detected to be: plucky 1022s autopkgtest [19:18:12]: updating testbed package index (apt update) 1023s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 1023s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 1023s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 1023s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 1023s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 1023s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [884 kB] 1023s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.4 kB] 1023s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 1023s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [829 kB] 1023s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4536 B] 1023s Fetched 2031 kB in 1s (1994 kB/s) 1024s Reading package lists... 1025s + lsb_release --codename --short 1025s + RELEASE=plucky 1025s + cat 1025s + [ plucky != trusty ] 1025s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 1025s Reading package lists... 1026s Building dependency tree... 1026s Reading state information... 1026s Calculating upgrade... 1027s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1027s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 1027s + /usr/lib/apt/apt-helper analyze-pattern ?true 1027s + uname -r 1027s + sed s/\./\\./g 1027s + running_kernel_pattern=^linux-.*6\.12\.0-12-generic.* 1027s + apt list ?obsolete 1027s + tail -n+2 1027s + cut -d/ -f1 1027s + grep -v ^linux-.*6\.12\.0-12-generic.* 1029s + true 1029s + obsolete_pkgs= 1029s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove 1029s Reading package lists... 1029s Building dependency tree... 1029s Reading state information... 1029s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1029s Reading package lists... 1029s Building dependency tree...+ grep -q trusty /etc/lsb-release 1029s + [ ! -d /usr/share/doc/unattended-upgrades ] 1029s + [ ! -d /usr/share/doc/lxd ] 1029s + [ ! -d /usr/share/doc/lxd-client ] 1029s + [ ! -d /usr/share/doc/snapd ] 1029s + type iptables 1029s + cat 1029s + chmod 755 /etc/rc.local 1029s + . /etc/rc.local 1029s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 1029s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 1029s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 1029s + uname -m 1029s + [ aarch64 = ppc64le ] 1029s + [ -d /run/systemd/system ] 1029s + systemd-detect-virt --quiet --vm 1029s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 1029s + cat 1029s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 1029s + echo COMPRESS=lz4 1029s autopkgtest [19:18:18]: upgrading testbed (apt dist-upgrade and autopurge) 1029s 1029s Reading state information... 1030s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 1030s Starting 2 pkgProblemResolver with broken count: 0 1030s Done 1031s Entering ResolveByKeep 1031s 1032s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1032s Reading package lists... 1032s Building dependency tree... 1032s Reading state information... 1033s Starting pkgProblemResolver with broken count: 0 1033s Starting 2 pkgProblemResolver with broken count: 0 1033s Done 1034s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1038s Reading package lists... 1039s Building dependency tree... 1039s Reading state information... 1039s Starting pkgProblemResolver with broken count: 0 1039s Starting 2 pkgProblemResolver with broken count: 0 1039s Done 1040s The following NEW packages will be installed: 1040s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 1040s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 1040s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 1040s g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 1040s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gdal-data gdal-plugins 1040s gfortran gfortran-14 gfortran-14-aarch64-linux-gnu 1040s gfortran-aarch64-linux-gnu icu-devtools javascript-common libabsl20230802 1040s libaec0 libaom3 libarmadillo14 libarpack2t64 libasan8 libavif16 libblas-dev 1040s libblas3 libblosc1 libbz2-dev libcairo2 libcc1-0 libcfitsio10t64 libdatrie1 1040s libdav1d7 libde265-0 libdeflate-dev libdeflate0 libfontconfig1 libfreexl1 1040s libfyba0t64 libgav1-1 libgcc-14-dev libgdal36 libgeos-c1t64 libgeos3.13.0 1040s libgeotiff5 libgfortran-14-dev libgfortran5 libgif7 libgomp1 libgpgmepp6t64 1040s libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-310 libhdf5-hl-310 1040s libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libhwasan0 libice6 1040s libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 1040s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 1041s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 1041s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 1041s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 1041s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 1041s libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3 1041s liblcms2-2 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64 1041s libmpc3 libmysqlclient24 libncurses-dev libnetcdf19t64 libodbc2 libodbcinst2 1041s libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 1041s libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 1041s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpoppler145 libpq5 1041s libproj25 libqhull-r8.0 librav1e0.7 libreadline-dev librttopo1 libsharpyuv0 1041s libsm6 libsnappy1v5 libspatialite8t64 libstdc++-14-dev libsvtav1enc2 libsz2 1041s libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 1041s libubsan1 libudunits2-0 libudunits2-data liburiparser1 libwebp7 1041s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 1041s libxt6t64 libyuv0 littler mysql-common node-bootstrap-sass node-html5shiv 1041s node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin 1041s proj-data r-base-core r-base-dev r-cran-abind r-cran-areal r-cran-askpass 1041s r-cran-base64enc r-cran-bdsmatrix r-cran-brio r-cran-bslib r-cran-cachem 1041s r-cran-cairo r-cran-callr r-cran-class r-cran-classint r-cran-cli 1041s r-cran-clue r-cran-cluster r-cran-codetools r-cran-collapse 1041s r-cran-colorspace r-cran-commonmark r-cran-covr r-cran-cpp11 r-cran-crayon 1041s r-cran-curl r-cran-dbi r-cran-deldir r-cran-desc r-cran-diffobj 1041s r-cran-digest r-cran-dplyr r-cran-e1071 r-cran-evaluate r-cran-fansi 1041s r-cran-farver r-cran-fastmap r-cran-fnn r-cran-fontawesome r-cran-formula 1041s r-cran-fs r-cran-future r-cran-future.apply r-cran-generics r-cran-ggforce 1041s r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest 1041s r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools r-cran-httpuv 1041s r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib r-cran-jsonlite 1041s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice 1041s r-cran-lazyeval r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lmtest 1041s r-cran-lwgeom r-cran-magrittr r-cran-mapdata r-cran-maps r-cran-mass 1041s r-cran-matrix r-cran-maxlik r-cran-memoise r-cran-mgcv r-cran-mime 1041s r-cran-misctools r-cran-munsell r-cran-ncdfgeom r-cran-ncmeta r-cran-nlme 1041s r-cran-openssl r-cran-parallelly r-cran-pbapply r-cran-pcict r-cran-pillar 1041s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plm 1041s r-cran-polyclip r-cran-praise r-cran-processx r-cran-promises r-cran-proxy 1041s r-cran-ps r-cran-purrr r-cran-r6 r-cran-randomforest r-cran-rappdirs 1041s r-cran-raster r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 1041s r-cran-rcppeigen r-cran-rdpack r-cran-rex r-cran-rlang r-cran-rmarkdown 1041s r-cran-rnetcdf r-cran-rpart r-cran-rprojroot r-cran-s2 r-cran-sandwich 1041s r-cran-sass r-cran-scales r-cran-sf r-cran-shiny r-cran-sourcetools 1041s r-cran-sp r-cran-spacetime r-cran-spatstat r-cran-spatstat.data 1041s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.linnet 1041s r-cran-spatstat.model r-cran-spatstat.random r-cran-spatstat.sparse 1041s r-cran-spatstat.utils r-cran-stars r-cran-stringi r-cran-stringr 1041s r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor r-cran-terra 1041s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 1041s r-cran-tweenr r-cran-units r-cran-utf8 r-cran-vctrs r-cran-viridis 1041s r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk r-cran-xfun 1041s r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common unzip 1041s x11-common xdg-utils zip zlib1g-dev 1041s 0 upgraded, 342 newly installed, 0 to remove and 0 not upgraded. 1041s Need to get 379 MB of archives. 1041s After this operation, 1110 MB of additional disk space will be used. 1041s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 1045s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 1046s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [10.6 MB] 1123s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-13ubuntu1 [1030 B] 1123s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B] 1123s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB] 1123s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-13ubuntu1 [49.6 kB] 1123s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-13ubuntu1 [145 kB] 1124s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-13ubuntu1 [27.8 kB] 1124s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-13ubuntu1 [2893 kB] 1146s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-13ubuntu1 [1283 kB] 1155s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-13ubuntu1 [2686 kB] 1171s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-13ubuntu1 [1152 kB] 1176s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-13ubuntu1 [1598 kB] 1186s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-13ubuntu1 [2596 kB] 1202s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [20.9 MB] 1330s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-13ubuntu1 [523 kB] 1332s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B] 1332s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B] 1332s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-13ubuntu1 [2502 kB] 1347s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [12.1 MB] 1410s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-13ubuntu1 [21.1 kB] 1410s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B] 1410s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B] 1410s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 1410s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 1411s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 1413s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 1416s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 1417s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 1417s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 1419s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 1423s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 1424s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 1435s Get:35 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-data all 3.10.1+dfsg-1build2 [269 kB] 1435s Get:36 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-plugins arm64 3.10.1+dfsg-1build2 [25.6 kB] 1435s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-13ubuntu1 [437 kB] 1437s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-13ubuntu1 [498 kB] 1439s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [11.4 MB] 1502s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-13ubuntu1 [13.2 kB] 1502s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1022 B] 1502s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.1.0-2ubuntu1 [1162 B] 1502s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 1503s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 11+nmu1 [5936 B] 1503s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libabsl20230802 arm64 20230802.1-4ubuntu2 [487 kB] 1506s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 1506s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libaom3 arm64 3.11.0-1 [1837 kB] 1512s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB] 1513s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB] 1527s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarpack2t64 arm64 3.9.1-4 [94.4 kB] 1528s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarmadillo14 arm64 1:14.2.1+dfsg-1 [104 kB] 1529s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdav1d7 arm64 1.5.1-1 [304 kB] 1532s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgav1-1 arm64 0.19.0-3 [572 kB] 1536s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 librav1e0.7 arm64 0.7.1-9 [763 kB] 1541s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsvtav1enc2 arm64 2.3.0+dfsg-1 [1832 kB] 1551s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 1552s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 1552s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libyuv0 arm64 0.0.1899.20250103-1 [158 kB] 1553s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 libavif16 arm64 1.1.1-1ubuntu1 [94.6 kB] 1553s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.0-4 [120 kB] 1553s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 1554s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 libblosc1 arm64 1.21.5+ds-1build1 [25.7 kB] 1554s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 1554s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 1554s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 1555s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 1555s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 1555s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 1557s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcfitsio10t64 arm64 4.5.0-5 [519 kB] 1559s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 1559s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libde265-0 arm64 1.0.15-1build4 [146 kB] 1560s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 1560s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 1560s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfyba0t64 arm64 4.1.1-11build1 [120 kB] 1560s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [23.1 kB] 1560s Get:76 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfreexl1 arm64 2.0.0-1build2 [41.9 kB] 1560s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos3.13.0 arm64 3.13.0-1 [918 kB] 1563s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos-c1t64 arm64 3.13.0-1 [92.6 kB] 1564s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 proj-data all 9.5.1-1 [7924 kB] 1599s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 1599s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 1601s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 1601s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 1602s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 1603s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 libproj25 arm64 9.5.1-1 [1342 kB] 1611s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeotiff5 arm64 1.7.3-1 [60.8 kB] 1611s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 1611s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 1611s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf4-0-alt arm64 4.3.0-1 [271 kB] 1614s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-310 arm64 1.14.5+repack-3 [1331 kB] 1619s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-aomdec arm64 1.19.5-1build1 [11.4 kB] 1619s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-libde265 arm64 1.19.5-1build1 [8902 B] 1619s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif1 arm64 1.19.5-1build1 [369 kB] 1620s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB] 1620s Get:95 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlbase1t64 arm64 1.3.0-12build1 [47.8 kB] 1621s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmldom1t64 arm64 1.3.0-12build1 [146 kB] 1621s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlengine1t64 arm64 1.3.0-12build1 [68.1 kB] 1621s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 mysql-common all 5.8+1.1.1 [6800 B] 1621s Get:99 http://ftpmaster.internal/ubuntu plucky/main arm64 libmysqlclient24 arm64 8.4.4-0ubuntu1 [1243 kB] 1626s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [59.8 kB] 1627s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnetcdf19t64 arm64 1:4.9.2-6ubuntu2 [471 kB] 1630s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libltdl7 arm64 2.5.4-2.1 [42.9 kB] 1631s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbc2 arm64 2.3.12-2ubuntu1 [147 kB] 1631s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 unixodbc-common all 2.3.12-2ubuntu1 [9044 B] 1631s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbcinst2 arm64 2.3.12-2ubuntu1 [30.3 kB] 1631s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libogdi4.1 arm64 4.1.1+ds-5 [217 kB] 1632s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu3 [182 kB] 1632s Get:108 http://ftpmaster.internal/ubuntu plucky/main arm64 libgpgmepp6t64 arm64 1.24.1-2ubuntu1 [119 kB] 1632s Get:109 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB] 1633s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 libpoppler145 arm64 25.01.0-2 [1139 kB] 1634s Get:111 http://ftpmaster.internal/ubuntu plucky/main arm64 libpq5 arm64 17.2-1build2 [141 kB] 1634s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB] 1634s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 librttopo1 arm64 1.1.0-3build2 [187 kB] 1634s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libspatialite8t64 arm64 5.1.0-3build1 [1814 kB] 1635s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3build1 [874 kB] 1635s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgdal36 arm64 3.10.1+dfsg-1build2 [8895 kB] 1636s Get:117 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 1636s Get:118 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 1636s Get:119 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 1636s Get:120 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 1636s Get:121 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 1637s Get:122 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 1637s Get:123 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 1637s Get:124 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 1637s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 1637s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 1637s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 1637s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 1637s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 1637s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 1637s Get:131 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 1637s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 1637s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 1637s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 1637s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 1637s Get:136 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 1637s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 1637s Get:138 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 1637s Get:139 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.0-4 [4419 kB] 1637s Get:140 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 1637s Get:141 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5-2 [385 kB] 1637s Get:142 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 1637s Get:143 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 1637s Get:144 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.1-1 [238 kB] 1637s Get:145 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.1-1 [49.6 kB] 1637s Get:146 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.1-1 [27.6 kB] 1637s Get:147 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 1637s Get:148 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 1637s Get:149 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB] 1638s Get:150 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu3 [187 kB] 1638s Get:151 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu3 [6704 B] 1638s Get:152 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.42-4ubuntu3 [694 kB] 1638s Get:153 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 1638s Get:154 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 1638s Get:155 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.44-3 [270 kB] 1638s Get:156 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 1638s Get:157 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 1638s Get:158 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 1638s Get:159 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 1638s Get:160 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 1638s Get:161 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 1638s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-data all 2.2.28-7build1 [19.4 kB] 1638s Get:163 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-0 arm64 2.2.28-7build1 [52.8 kB] 1638s Get:164 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 1638s Get:165 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 1638s Get:166 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 1638s Get:167 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 1638s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.2-1build1 [28.4 MB] 1638s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 1638s Get:170 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 1638s Get:171 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 1638s Get:172 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 1638s Get:173 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 1638s Get:174 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 1638s Get:175 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 1639s Get:176 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.3-1 [180 kB] 1639s Get:177 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 1639s Get:178 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 1639s Get:179 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 1639s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.2-1build1 [4342 B] 1639s Get:181 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 1639s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 1639s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB] 1639s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 1639s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 1639s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB] 1639s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 1639s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 1639s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 1639s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 1639s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 1640s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 1640s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 1640s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 1640s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 1640s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 1640s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 1640s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 1640s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 1640s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-64-1 [1110 kB] 1640s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB] 1640s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 1640s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-e1071 arm64 1.7-16-1 [563 kB] 1641s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-kernsmooth arm64 2.23-26-1 [93.3 kB] 1641s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-classint arm64 0.4-11+dfsg-1 [108 kB] 1641s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB] 1641s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 1641s Get:208 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 1641s Get:209 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-wk arm64 0.9.4-1 [1790 kB] 1641s Get:210 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-s2 arm64 1.1.7-1 [1987 kB] 1642s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-units arm64 0.8-5+dfsg-1 [270 kB] 1642s Get:212 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sf arm64 1.0-19+dfsg-1 [3247 kB] 1646s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-areal all 0.1.8+dfsg-2 [1004 kB] 1649s Get:214 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 1649s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 1649s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 1650s Get:217 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bdsmatrix arm64 1.3-7-1 [300 kB] 1652s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 1652s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 1653s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 1653s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 1655s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 1657s Get:223 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 1657s Get:224 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB] 1659s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 1659s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 1659s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 1660s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 1660s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 1663s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 1686s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cairo arm64 1.6-2-1 [89.0 kB] 1686s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.8.1-1 [395 kB] 1689s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.5-1 [354 kB] 1691s Get:234 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 1694s Get:235 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cluster arm64 2.1.8-1 [568 kB] 1697s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-clue arm64 0.3-66-1 [967 kB] 1701s Get:237 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 1702s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-collapse arm64 2.0.19-1 [3292 kB] 1718s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 1726s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB] 1726s Ign:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 1726s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 1727s Get:242 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rex all 1.2.1-1 [129 kB] 1727s Get:243 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-curl arm64 6.1.0+dfsg-1 [194 kB] 1727s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-openssl arm64 2.2.0+dfsg-1 [404 kB] 1727s Get:245 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 1727s Get:246 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 1727s Get:247 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 1727s Get:248 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 1727s Get:249 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cpp11 all 0.5.1-1 [233 kB] 1727s Get:250 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 1727s Get:251 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 1727s Get:252 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 1727s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 1727s Get:254 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 1727s Get:255 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fnn arm64 1.1.4.1-1 [125 kB] 1727s Get:256 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 1727s Get:257 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formula all 1.2-5-1 [158 kB] 1727s Get:258 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-globals all 0.16.3-1 [120 kB] 1727s Get:259 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 1727s Get:260 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-parallelly arm64 1.41.0-1 [507 kB] 1727s Get:261 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 1727s Get:262 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 1727s Get:263 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 1727s Get:264 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 1727s Get:265 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 1727s Get:266 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.167-1 [2311 kB] 1727s Get:267 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-2-1 [4153 kB] 1727s Get:268 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 1727s Get:269 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 1727s Get:270 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 1727s Get:271 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 1727s Get:272 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 1728s Get:273 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 1728s Get:274 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 1728s Get:275 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tweenr arm64 2.0.3-1 [404 kB] 1728s Get:276 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-polyclip arm64 1.10-7-1 [113 kB] 1728s Get:277 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-systemfonts arm64 1.2.1-1 [302 kB] 1728s Get:278 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 1728s Get:279 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggforce arm64 0.4.2-1 [1778 kB] 1728s Get:280 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringi arm64 1.8.4-1build1 [902 kB] 1728s Get:281 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 1728s Get:282 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggthemes all 5.1.0-1 [434 kB] 1728s Get:283 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-goftest arm64 1.2-3-1 [60.2 kB] 1728s Get:284 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 1728s Get:285 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.50+dfsg-1 [567 kB] 1728s Get:286 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 1728s Get:287 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 1728s Get:288 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 1728s Get:289 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 1728s Get:290 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-intervals arm64 0.15.5-1 [602 kB] 1728s Get:291 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 1728s Get:292 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 1728s Get:293 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-zoo arm64 1.8-12-2 [984 kB] 1728s Get:294 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lmtest arm64 0.9.40-1 [396 kB] 1728s Get:295 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lwgeom arm64 0.2-14-1 [394 kB] 1728s Get:296 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-maps arm64 3.4.2-1 [2362 kB] 1728s Get:297 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mapdata arm64 2.3.1-1 [23.5 MB] 1729s Get:298 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-misctools all 0.6-28-1 [99.9 kB] 1729s Get:299 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB] 1729s Get:300 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-maxlik all 1.5-2.1-1 [1083 kB] 1729s Get:301 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rnetcdf arm64 2.9-1-1build2 [228 kB] 1729s Get:302 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 1729s Get:303 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ncmeta all 0.3.6-1 [360 kB] 1729s Get:304 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stars all 0.6-7-1 [4411 kB] 1729s Get:305 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB] 1729s Get:306 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 1729s Get:307 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pcict arm64 0.5-4.4-1 [94.0 kB] 1729s Get:308 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 1729s Get:309 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB] 1729s Get:310 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB] 1729s Get:311 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB] 1729s Get:312 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rdpack all 2.6.2-1 [757 kB] 1729s Get:313 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plm all 2.6-5-1 [1815 kB] 1729s Get:314 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 1729s Get:315 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-randomforest arm64 4.7-1.2-1 [216 kB] 1729s Get:316 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sp arm64 1:2.1-4+dfsg-1 [1472 kB] 1729s Get:317 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-terra arm64 1.8-10-1 [4052 kB] 1729s Get:318 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-raster arm64 3.6-31-1 [3149 kB] 1729s Get:319 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.54-1 [147 kB] 1729s Get:320 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 1729s Get:321 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 1729s Get:322 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 1729s Get:323 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 1729s Get:324 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 1729s Get:325 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 1729s Get:326 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 1730s Get:327 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rpart arm64 4.1.24-1 [665 kB] 1730s Get:328 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xts arm64 0.14.1-1 [1189 kB] 1730s Get:329 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spacetime all 1.3-2-2 [2775 kB] 1730s Get:330 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.utils arm64 3.1-2-1 [381 kB] 1730s Get:331 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.data all 3.1-4-1 [4047 kB] 1730s Get:332 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.geom arm64 3.2-9-2 [3939 kB] 1730s Get:333 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.random arm64 3.2-3-1 [1157 kB] 1730s Get:334 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tensor all 1.5-4 [15.7 kB] 1730s Get:335 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.sparse arm64 3.1-0-1 [218 kB] 1730s Get:336 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.explore arm64 3.2-7-1 [3413 kB] 1730s Get:337 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.model arm64 3.2-11-1 [3384 kB] 1730s Get:338 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.linnet arm64 3.1-5-1 [1468 kB] 1730s Get:339 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat arm64 3.0-8-1 [3881 kB] 1730s Get:340 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-1 [150 kB] 1730s Get:341 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 1731s Get:342 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 1733s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB] 1734s Preconfiguring packages ... 1734s Fetched 379 MB in 11min 32s (548 kB/s) 1734s Selecting previously unselected package libisl23:arm64. 1734s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116576 files and directories currently installed.) 1734s Preparing to unpack .../000-libisl23_0.27-1_arm64.deb ... 1734s Unpacking libisl23:arm64 (0.27-1) ... 1734s Selecting previously unselected package libmpc3:arm64. 1734s Preparing to unpack .../001-libmpc3_1.3.1-1build2_arm64.deb ... 1734s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 1734s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 1734s Preparing to unpack .../002-cpp-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 1734s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package cpp-14. 1735s Preparing to unpack .../003-cpp-14_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking cpp-14 (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package cpp-aarch64-linux-gnu. 1735s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 1735s Unpacking cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1735s Selecting previously unselected package cpp. 1735s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_arm64.deb ... 1735s Unpacking cpp (4:14.1.0-2ubuntu1) ... 1735s Selecting previously unselected package libcc1-0:arm64. 1735s Preparing to unpack .../006-libcc1-0_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking libcc1-0:arm64 (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package libgomp1:arm64. 1735s Preparing to unpack .../007-libgomp1_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking libgomp1:arm64 (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package libitm1:arm64. 1735s Preparing to unpack .../008-libitm1_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking libitm1:arm64 (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package libasan8:arm64. 1735s Preparing to unpack .../009-libasan8_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking libasan8:arm64 (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package liblsan0:arm64. 1735s Preparing to unpack .../010-liblsan0_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking liblsan0:arm64 (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package libtsan2:arm64. 1735s Preparing to unpack .../011-libtsan2_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking libtsan2:arm64 (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package libubsan1:arm64. 1735s Preparing to unpack .../012-libubsan1_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking libubsan1:arm64 (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package libhwasan0:arm64. 1735s Preparing to unpack .../013-libhwasan0_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking libhwasan0:arm64 (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package libgcc-14-dev:arm64. 1735s Preparing to unpack .../014-libgcc-14-dev_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking libgcc-14-dev:arm64 (14.2.0-13ubuntu1) ... 1735s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 1735s Preparing to unpack .../015-gcc-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 1735s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1736s Selecting previously unselected package gcc-14. 1736s Preparing to unpack .../016-gcc-14_14.2.0-13ubuntu1_arm64.deb ... 1736s Unpacking gcc-14 (14.2.0-13ubuntu1) ... 1736s Selecting previously unselected package gcc-aarch64-linux-gnu. 1736s Preparing to unpack .../017-gcc-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 1736s Unpacking gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1736s Selecting previously unselected package gcc. 1736s Preparing to unpack .../018-gcc_4%3a14.1.0-2ubuntu1_arm64.deb ... 1736s Unpacking gcc (4:14.1.0-2ubuntu1) ... 1736s Selecting previously unselected package libstdc++-14-dev:arm64. 1736s Preparing to unpack .../019-libstdc++-14-dev_14.2.0-13ubuntu1_arm64.deb ... 1736s Unpacking libstdc++-14-dev:arm64 (14.2.0-13ubuntu1) ... 1736s Selecting previously unselected package g++-14-aarch64-linux-gnu. 1736s Preparing to unpack .../020-g++-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 1736s Unpacking g++-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1736s Selecting previously unselected package g++-14. 1736s Preparing to unpack .../021-g++-14_14.2.0-13ubuntu1_arm64.deb ... 1736s Unpacking g++-14 (14.2.0-13ubuntu1) ... 1736s Selecting previously unselected package g++-aarch64-linux-gnu. 1736s Preparing to unpack .../022-g++-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 1736s Unpacking g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1736s Selecting previously unselected package g++. 1736s Preparing to unpack .../023-g++_4%3a14.1.0-2ubuntu1_arm64.deb ... 1736s Unpacking g++ (4:14.1.0-2ubuntu1) ... 1737s Selecting previously unselected package build-essential. 1737s Preparing to unpack .../024-build-essential_12.10ubuntu1_arm64.deb ... 1737s Unpacking build-essential (12.10ubuntu1) ... 1737s Selecting previously unselected package dctrl-tools. 1737s Preparing to unpack .../025-dctrl-tools_2.24-3build3_arm64.deb ... 1737s Unpacking dctrl-tools (2.24-3build3) ... 1737s Selecting previously unselected package fonts-dejavu-mono. 1737s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ... 1737s Unpacking fonts-dejavu-mono (2.37-8) ... 1737s Selecting previously unselected package fonts-dejavu-core. 1737s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ... 1737s Unpacking fonts-dejavu-core (2.37-8) ... 1737s Selecting previously unselected package fontconfig-config. 1737s Preparing to unpack .../028-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 1737s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 1737s Selecting previously unselected package libfontconfig1:arm64. 1737s Preparing to unpack .../029-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 1737s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 1737s Selecting previously unselected package fontconfig. 1737s Preparing to unpack .../030-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 1737s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 1737s Selecting previously unselected package fonts-font-awesome. 1737s Preparing to unpack .../031-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 1737s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 1737s Selecting previously unselected package fonts-glyphicons-halflings. 1737s Preparing to unpack .../032-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 1737s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1737s Selecting previously unselected package fonts-mathjax. 1737s Preparing to unpack .../033-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 1737s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 1737s Selecting previously unselected package gdal-data. 1737s Preparing to unpack .../034-gdal-data_3.10.1+dfsg-1build2_all.deb ... 1737s Unpacking gdal-data (3.10.1+dfsg-1build2) ... 1737s Selecting previously unselected package gdal-plugins:arm64. 1737s Preparing to unpack .../035-gdal-plugins_3.10.1+dfsg-1build2_arm64.deb ... 1737s Unpacking gdal-plugins:arm64 (3.10.1+dfsg-1build2) ... 1738s Selecting previously unselected package libgfortran5:arm64. 1738s Preparing to unpack .../036-libgfortran5_14.2.0-13ubuntu1_arm64.deb ... 1738s Unpacking libgfortran5:arm64 (14.2.0-13ubuntu1) ... 1738s Selecting previously unselected package libgfortran-14-dev:arm64. 1738s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-13ubuntu1_arm64.deb ... 1738s Unpacking libgfortran-14-dev:arm64 (14.2.0-13ubuntu1) ... 1738s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 1738s Preparing to unpack .../038-gfortran-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 1738s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1738s Selecting previously unselected package gfortran-14. 1738s Preparing to unpack .../039-gfortran-14_14.2.0-13ubuntu1_arm64.deb ... 1738s Unpacking gfortran-14 (14.2.0-13ubuntu1) ... 1738s Selecting previously unselected package gfortran-aarch64-linux-gnu. 1738s Preparing to unpack .../040-gfortran-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 1738s Unpacking gfortran-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1738s Selecting previously unselected package gfortran. 1738s Preparing to unpack .../041-gfortran_4%3a14.1.0-2ubuntu1_arm64.deb ... 1738s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 1738s Selecting previously unselected package icu-devtools. 1738s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_arm64.deb ... 1738s Unpacking icu-devtools (76.1-1ubuntu2) ... 1738s Selecting previously unselected package javascript-common. 1738s Preparing to unpack .../043-javascript-common_11+nmu1_all.deb ... 1738s Unpacking javascript-common (11+nmu1) ... 1738s Selecting previously unselected package libabsl20230802:arm64. 1738s Preparing to unpack .../044-libabsl20230802_20230802.1-4ubuntu2_arm64.deb ... 1738s Unpacking libabsl20230802:arm64 (20230802.1-4ubuntu2) ... 1738s Selecting previously unselected package libaec0:arm64. 1738s Preparing to unpack .../045-libaec0_1.1.3-1_arm64.deb ... 1738s Unpacking libaec0:arm64 (1.1.3-1) ... 1738s Selecting previously unselected package libaom3:arm64. 1738s Preparing to unpack .../046-libaom3_3.11.0-1_arm64.deb ... 1738s Unpacking libaom3:arm64 (3.11.0-1) ... 1738s Selecting previously unselected package libblas3:arm64. 1738s Preparing to unpack .../047-libblas3_3.12.0-4_arm64.deb ... 1738s Unpacking libblas3:arm64 (3.12.0-4) ... 1738s Selecting previously unselected package liblapack3:arm64. 1738s Preparing to unpack .../048-liblapack3_3.12.0-4_arm64.deb ... 1738s Unpacking liblapack3:arm64 (3.12.0-4) ... 1738s Selecting previously unselected package libarpack2t64:arm64. 1738s Preparing to unpack .../049-libarpack2t64_3.9.1-4_arm64.deb ... 1738s Unpacking libarpack2t64:arm64 (3.9.1-4) ... 1738s Selecting previously unselected package libarmadillo14. 1739s Preparing to unpack .../050-libarmadillo14_1%3a14.2.1+dfsg-1_arm64.deb ... 1739s Unpacking libarmadillo14 (1:14.2.1+dfsg-1) ... 1739s Selecting previously unselected package libdav1d7:arm64. 1739s Preparing to unpack .../051-libdav1d7_1.5.1-1_arm64.deb ... 1739s Unpacking libdav1d7:arm64 (1.5.1-1) ... 1739s Selecting previously unselected package libgav1-1:arm64. 1739s Preparing to unpack .../052-libgav1-1_0.19.0-3_arm64.deb ... 1739s Unpacking libgav1-1:arm64 (0.19.0-3) ... 1739s Selecting previously unselected package librav1e0.7:arm64. 1739s Preparing to unpack .../053-librav1e0.7_0.7.1-9_arm64.deb ... 1739s Unpacking librav1e0.7:arm64 (0.7.1-9) ... 1739s Selecting previously unselected package libsvtav1enc2:arm64. 1739s Preparing to unpack .../054-libsvtav1enc2_2.3.0+dfsg-1_arm64.deb ... 1739s Unpacking libsvtav1enc2:arm64 (2.3.0+dfsg-1) ... 1739s Selecting previously unselected package libjpeg-turbo8:arm64. 1739s Preparing to unpack .../055-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 1739s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 1739s Selecting previously unselected package libjpeg8:arm64. 1739s Preparing to unpack .../056-libjpeg8_8c-2ubuntu11_arm64.deb ... 1739s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 1739s Selecting previously unselected package libyuv0:arm64. 1739s Preparing to unpack .../057-libyuv0_0.0.1899.20250103-1_arm64.deb ... 1739s Unpacking libyuv0:arm64 (0.0.1899.20250103-1) ... 1739s Selecting previously unselected package libavif16:arm64. 1739s Preparing to unpack .../058-libavif16_1.1.1-1ubuntu1_arm64.deb ... 1739s Unpacking libavif16:arm64 (1.1.1-1ubuntu1) ... 1739s Selecting previously unselected package libblas-dev:arm64. 1739s Preparing to unpack .../059-libblas-dev_3.12.0-4_arm64.deb ... 1739s Unpacking libblas-dev:arm64 (3.12.0-4) ... 1739s Selecting previously unselected package libsnappy1v5:arm64. 1739s Preparing to unpack .../060-libsnappy1v5_1.2.1-1_arm64.deb ... 1739s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 1739s Selecting previously unselected package libblosc1:arm64. 1739s Preparing to unpack .../061-libblosc1_1.21.5+ds-1build1_arm64.deb ... 1739s Unpacking libblosc1:arm64 (1.21.5+ds-1build1) ... 1739s Selecting previously unselected package libbz2-dev:arm64. 1739s Preparing to unpack .../062-libbz2-dev_1.0.8-6_arm64.deb ... 1739s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 1739s Selecting previously unselected package libpixman-1-0:arm64. 1739s Preparing to unpack .../063-libpixman-1-0_0.44.0-3_arm64.deb ... 1739s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 1739s Selecting previously unselected package libxcb-render0:arm64. 1739s Preparing to unpack .../064-libxcb-render0_1.17.0-2_arm64.deb ... 1739s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 1739s Selecting previously unselected package libxcb-shm0:arm64. 1739s Preparing to unpack .../065-libxcb-shm0_1.17.0-2_arm64.deb ... 1739s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 1739s Selecting previously unselected package libxrender1:arm64. 1739s Preparing to unpack .../066-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 1739s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 1739s Selecting previously unselected package libcairo2:arm64. 1739s Preparing to unpack .../067-libcairo2_1.18.2-2_arm64.deb ... 1739s Unpacking libcairo2:arm64 (1.18.2-2) ... 1739s Selecting previously unselected package libcfitsio10t64:arm64. 1739s Preparing to unpack .../068-libcfitsio10t64_4.5.0-5_arm64.deb ... 1739s Unpacking libcfitsio10t64:arm64 (4.5.0-5) ... 1739s Selecting previously unselected package libdatrie1:arm64. 1739s Preparing to unpack .../069-libdatrie1_0.2.13-3build1_arm64.deb ... 1739s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 1739s Selecting previously unselected package libde265-0:arm64. 1739s Preparing to unpack .../070-libde265-0_1.0.15-1build4_arm64.deb ... 1739s Unpacking libde265-0:arm64 (1.0.15-1build4) ... 1739s Selecting previously unselected package libdeflate0:arm64. 1740s Preparing to unpack .../071-libdeflate0_1.23-1_arm64.deb ... 1740s Unpacking libdeflate0:arm64 (1.23-1) ... 1740s Selecting previously unselected package libdeflate-dev:arm64. 1740s Preparing to unpack .../072-libdeflate-dev_1.23-1_arm64.deb ... 1740s Unpacking libdeflate-dev:arm64 (1.23-1) ... 1740s Selecting previously unselected package libfyba0t64:arm64. 1740s Preparing to unpack .../073-libfyba0t64_4.1.1-11build1_arm64.deb ... 1740s Unpacking libfyba0t64:arm64 (4.1.1-11build1) ... 1740s Selecting previously unselected package libminizip1t64:arm64. 1740s Preparing to unpack .../074-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 1740s Unpacking libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1740s Selecting previously unselected package libfreexl1:arm64. 1740s Preparing to unpack .../075-libfreexl1_2.0.0-1build2_arm64.deb ... 1740s Unpacking libfreexl1:arm64 (2.0.0-1build2) ... 1740s Selecting previously unselected package libgeos3.13.0:arm64. 1740s Preparing to unpack .../076-libgeos3.13.0_3.13.0-1_arm64.deb ... 1740s Unpacking libgeos3.13.0:arm64 (3.13.0-1) ... 1740s Selecting previously unselected package libgeos-c1t64:arm64. 1740s Preparing to unpack .../077-libgeos-c1t64_3.13.0-1_arm64.deb ... 1740s Unpacking libgeos-c1t64:arm64 (3.13.0-1) ... 1740s Selecting previously unselected package proj-data. 1740s Preparing to unpack .../078-proj-data_9.5.1-1_all.deb ... 1740s Unpacking proj-data (9.5.1-1) ... 1740s Selecting previously unselected package libjbig0:arm64. 1740s Preparing to unpack .../079-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 1740s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 1740s Selecting previously unselected package liblerc4:arm64. 1740s Preparing to unpack .../080-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 1740s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 1740s Selecting previously unselected package libsharpyuv0:arm64. 1740s Preparing to unpack .../081-libsharpyuv0_1.5.0-0.1_arm64.deb ... 1740s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 1740s Selecting previously unselected package libwebp7:arm64. 1740s Preparing to unpack .../082-libwebp7_1.5.0-0.1_arm64.deb ... 1740s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 1740s Selecting previously unselected package libtiff6:arm64. 1740s Preparing to unpack .../083-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 1740s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 1740s Selecting previously unselected package libproj25:arm64. 1740s Preparing to unpack .../084-libproj25_9.5.1-1_arm64.deb ... 1740s Unpacking libproj25:arm64 (9.5.1-1) ... 1740s Selecting previously unselected package libgeotiff5:arm64. 1740s Preparing to unpack .../085-libgeotiff5_1.7.3-1_arm64.deb ... 1740s Unpacking libgeotiff5:arm64 (1.7.3-1) ... 1740s Selecting previously unselected package libgif7:arm64. 1740s Preparing to unpack .../086-libgif7_5.2.2-1ubuntu1_arm64.deb ... 1740s Unpacking libgif7:arm64 (5.2.2-1ubuntu1) ... 1740s Selecting previously unselected package libsz2:arm64. 1740s Preparing to unpack .../087-libsz2_1.1.3-1_arm64.deb ... 1740s Unpacking libsz2:arm64 (1.1.3-1) ... 1740s Selecting previously unselected package libhdf4-0-alt:arm64. 1740s Preparing to unpack .../088-libhdf4-0-alt_4.3.0-1_arm64.deb ... 1740s Unpacking libhdf4-0-alt:arm64 (4.3.0-1) ... 1740s Selecting previously unselected package libhdf5-310:arm64. 1740s Preparing to unpack .../089-libhdf5-310_1.14.5+repack-3_arm64.deb ... 1740s Unpacking libhdf5-310:arm64 (1.14.5+repack-3) ... 1741s Selecting previously unselected package libheif-plugin-aomdec:arm64. 1741s Preparing to unpack .../090-libheif-plugin-aomdec_1.19.5-1build1_arm64.deb ... 1741s Unpacking libheif-plugin-aomdec:arm64 (1.19.5-1build1) ... 1741s Selecting previously unselected package libheif-plugin-libde265:arm64. 1741s Preparing to unpack .../091-libheif-plugin-libde265_1.19.5-1build1_arm64.deb ... 1741s Unpacking libheif-plugin-libde265:arm64 (1.19.5-1build1) ... 1741s Selecting previously unselected package libheif1:arm64. 1741s Preparing to unpack .../092-libheif1_1.19.5-1build1_arm64.deb ... 1741s Unpacking libheif1:arm64 (1.19.5-1build1) ... 1741s Selecting previously unselected package liburiparser1:arm64. 1741s Preparing to unpack .../093-liburiparser1_0.9.8+dfsg-2_arm64.deb ... 1741s Unpacking liburiparser1:arm64 (0.9.8+dfsg-2) ... 1741s Selecting previously unselected package libkmlbase1t64:arm64. 1741s Preparing to unpack .../094-libkmlbase1t64_1.3.0-12build1_arm64.deb ... 1741s Unpacking libkmlbase1t64:arm64 (1.3.0-12build1) ... 1741s Selecting previously unselected package libkmldom1t64:arm64. 1741s Preparing to unpack .../095-libkmldom1t64_1.3.0-12build1_arm64.deb ... 1741s Unpacking libkmldom1t64:arm64 (1.3.0-12build1) ... 1741s Selecting previously unselected package libkmlengine1t64:arm64. 1741s Preparing to unpack .../096-libkmlengine1t64_1.3.0-12build1_arm64.deb ... 1741s Unpacking libkmlengine1t64:arm64 (1.3.0-12build1) ... 1741s Selecting previously unselected package mysql-common. 1741s Preparing to unpack .../097-mysql-common_5.8+1.1.1_all.deb ... 1741s Unpacking mysql-common (5.8+1.1.1) ... 1741s Selecting previously unselected package libmysqlclient24:arm64. 1741s Preparing to unpack .../098-libmysqlclient24_8.4.4-0ubuntu1_arm64.deb ... 1741s Unpacking libmysqlclient24:arm64 (8.4.4-0ubuntu1) ... 1741s Selecting previously unselected package libhdf5-hl-310:arm64. 1741s Preparing to unpack .../099-libhdf5-hl-310_1.14.5+repack-3_arm64.deb ... 1741s Unpacking libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 1741s Selecting previously unselected package libnetcdf19t64:arm64. 1741s Preparing to unpack .../100-libnetcdf19t64_1%3a4.9.2-6ubuntu2_arm64.deb ... 1741s Unpacking libnetcdf19t64:arm64 (1:4.9.2-6ubuntu2) ... 1741s Selecting previously unselected package libltdl7:arm64. 1741s Preparing to unpack .../101-libltdl7_2.5.4-2.1_arm64.deb ... 1741s Unpacking libltdl7:arm64 (2.5.4-2.1) ... 1741s Selecting previously unselected package libodbc2:arm64. 1741s Preparing to unpack .../102-libodbc2_2.3.12-2ubuntu1_arm64.deb ... 1741s Unpacking libodbc2:arm64 (2.3.12-2ubuntu1) ... 1741s Selecting previously unselected package unixodbc-common. 1741s Preparing to unpack .../103-unixodbc-common_2.3.12-2ubuntu1_all.deb ... 1741s Unpacking unixodbc-common (2.3.12-2ubuntu1) ... 1741s Selecting previously unselected package libodbcinst2:arm64. 1741s Preparing to unpack .../104-libodbcinst2_2.3.12-2ubuntu1_arm64.deb ... 1741s Unpacking libodbcinst2:arm64 (2.3.12-2ubuntu1) ... 1741s Selecting previously unselected package libogdi4.1:arm64. 1741s Preparing to unpack .../105-libogdi4.1_4.1.1+ds-5_arm64.deb ... 1741s Unpacking libogdi4.1:arm64 (4.1.1+ds-5) ... 1741s Selecting previously unselected package libopenjp2-7:arm64. 1741s Preparing to unpack .../106-libopenjp2-7_2.5.0-2ubuntu3_arm64.deb ... 1741s Unpacking libopenjp2-7:arm64 (2.5.0-2ubuntu3) ... 1741s Selecting previously unselected package libgpgmepp6t64:arm64. 1741s Preparing to unpack .../107-libgpgmepp6t64_1.24.1-2ubuntu1_arm64.deb ... 1741s Unpacking libgpgmepp6t64:arm64 (1.24.1-2ubuntu1) ... 1741s Selecting previously unselected package liblcms2-2:arm64. 1741s Preparing to unpack .../108-liblcms2-2_2.16-2_arm64.deb ... 1741s Unpacking liblcms2-2:arm64 (2.16-2) ... 1741s Selecting previously unselected package libpoppler145:arm64. 1741s Preparing to unpack .../109-libpoppler145_25.01.0-2_arm64.deb ... 1741s Unpacking libpoppler145:arm64 (25.01.0-2) ... 1741s Selecting previously unselected package libpq5:arm64. 1742s Preparing to unpack .../110-libpq5_17.2-1build2_arm64.deb ... 1742s Unpacking libpq5:arm64 (17.2-1build2) ... 1742s Selecting previously unselected package libqhull-r8.0:arm64. 1742s Preparing to unpack .../111-libqhull-r8.0_2020.2-6build1_arm64.deb ... 1742s Unpacking libqhull-r8.0:arm64 (2020.2-6build1) ... 1742s Selecting previously unselected package librttopo1:arm64. 1742s Preparing to unpack .../112-librttopo1_1.1.0-3build2_arm64.deb ... 1742s Unpacking librttopo1:arm64 (1.1.0-3build2) ... 1742s Selecting previously unselected package libspatialite8t64:arm64. 1742s Preparing to unpack .../113-libspatialite8t64_5.1.0-3build1_arm64.deb ... 1742s Unpacking libspatialite8t64:arm64 (5.1.0-3build1) ... 1742s Selecting previously unselected package libxerces-c3.2t64:arm64. 1742s Preparing to unpack .../114-libxerces-c3.2t64_3.2.4+debian-1.3build1_arm64.deb ... 1742s Unpacking libxerces-c3.2t64:arm64 (3.2.4+debian-1.3build1) ... 1742s Selecting previously unselected package libgdal36:arm64. 1742s Preparing to unpack .../115-libgdal36_3.10.1+dfsg-1build2_arm64.deb ... 1742s Unpacking libgdal36:arm64 (3.10.1+dfsg-1build2) ... 1742s Selecting previously unselected package libgraphite2-3:arm64. 1742s Preparing to unpack .../116-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 1742s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 1742s Selecting previously unselected package libharfbuzz0b:arm64. 1742s Preparing to unpack .../117-libharfbuzz0b_10.2.0-1_arm64.deb ... 1742s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 1742s Selecting previously unselected package x11-common. 1742s Preparing to unpack .../118-x11-common_1%3a7.7+23ubuntu3_all.deb ... 1742s Unpacking x11-common (1:7.7+23ubuntu3) ... 1742s Selecting previously unselected package libice6:arm64. 1742s Preparing to unpack .../119-libice6_2%3a1.1.1-1_arm64.deb ... 1742s Unpacking libice6:arm64 (2:1.1.1-1) ... 1742s Selecting previously unselected package libicu-dev:arm64. 1742s Preparing to unpack .../120-libicu-dev_76.1-1ubuntu2_arm64.deb ... 1742s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 1742s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 1743s Preparing to unpack .../121-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 1743s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 1743s Selecting previously unselected package libjpeg8-dev:arm64. 1743s Preparing to unpack .../122-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 1743s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 1743s Selecting previously unselected package libjpeg-dev:arm64. 1743s Preparing to unpack .../123-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 1743s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 1743s Selecting previously unselected package libjs-bootstrap. 1743s Preparing to unpack .../124-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 1743s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 1743s Selecting previously unselected package libjs-popper.js. 1743s Preparing to unpack .../125-libjs-popper.js_1.16.1+ds-6_all.deb ... 1743s Unpacking libjs-popper.js (1.16.1+ds-6) ... 1743s Selecting previously unselected package libjs-bootstrap4. 1743s Preparing to unpack .../126-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 1743s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 1743s Selecting previously unselected package libjs-d3. 1743s Preparing to unpack .../127-libjs-d3_3.5.17-4_all.deb ... 1743s Unpacking libjs-d3 (3.5.17-4) ... 1743s Selecting previously unselected package libjs-es5-shim. 1743s Preparing to unpack .../128-libjs-es5-shim_4.6.7-2_all.deb ... 1743s Unpacking libjs-es5-shim (4.6.7-2) ... 1743s Selecting previously unselected package libjs-highlight.js. 1743s Preparing to unpack .../129-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 1743s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 1743s Selecting previously unselected package libjs-jquery. 1743s Preparing to unpack .../130-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 1743s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1743s Selecting previously unselected package libjs-jquery-datatables. 1743s Preparing to unpack .../131-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 1743s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 1743s Selecting previously unselected package libjs-sifter.js. 1743s Preparing to unpack .../132-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 1743s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 1743s Selecting previously unselected package libjs-microplugin.js. 1743s Preparing to unpack .../133-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 1743s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 1743s Selecting previously unselected package libjs-jquery-selectize.js. 1743s Preparing to unpack .../134-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 1743s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1743s Selecting previously unselected package libjs-jquery-ui. 1743s Preparing to unpack .../135-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 1743s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 1743s Selecting previously unselected package libjs-json. 1743s Preparing to unpack .../136-libjs-json_0~20221030+~1.0.8-1_all.deb ... 1743s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 1743s Selecting previously unselected package libjs-prettify. 1743s Preparing to unpack .../137-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 1743s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 1743s Selecting previously unselected package liblapack-dev:arm64. 1743s Preparing to unpack .../138-liblapack-dev_3.12.0-4_arm64.deb ... 1743s Unpacking liblapack-dev:arm64 (3.12.0-4) ... 1744s Selecting previously unselected package liblua5.4-0:arm64. 1744s Preparing to unpack .../139-liblua5.4-0_5.4.7-1_arm64.deb ... 1744s Unpacking liblua5.4-0:arm64 (5.4.7-1) ... 1744s Selecting previously unselected package libncurses-dev:arm64. 1744s Preparing to unpack .../140-libncurses-dev_6.5-2_arm64.deb ... 1744s Unpacking libncurses-dev:arm64 (6.5-2) ... 1744s Selecting previously unselected package libthai-data. 1744s Preparing to unpack .../141-libthai-data_0.1.29-2build1_all.deb ... 1744s Unpacking libthai-data (0.1.29-2build1) ... 1744s Selecting previously unselected package libthai0:arm64. 1744s Preparing to unpack .../142-libthai0_0.1.29-2build1_arm64.deb ... 1744s Unpacking libthai0:arm64 (0.1.29-2build1) ... 1744s Selecting previously unselected package libpango-1.0-0:arm64. 1744s Preparing to unpack .../143-libpango-1.0-0_1.56.1-1_arm64.deb ... 1744s Unpacking libpango-1.0-0:arm64 (1.56.1-1) ... 1744s Selecting previously unselected package libpangoft2-1.0-0:arm64. 1744s Preparing to unpack .../144-libpangoft2-1.0-0_1.56.1-1_arm64.deb ... 1744s Unpacking libpangoft2-1.0-0:arm64 (1.56.1-1) ... 1744s Selecting previously unselected package libpangocairo-1.0-0:arm64. 1744s Preparing to unpack .../145-libpangocairo-1.0-0_1.56.1-1_arm64.deb ... 1744s Unpacking libpangocairo-1.0-0:arm64 (1.56.1-1) ... 1744s Selecting previously unselected package libpaper2:arm64. 1744s Preparing to unpack .../146-libpaper2_2.2.5-0.3_arm64.deb ... 1744s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 1744s Selecting previously unselected package libpaper-utils. 1744s Preparing to unpack .../147-libpaper-utils_2.2.5-0.3_arm64.deb ... 1744s Unpacking libpaper-utils (2.2.5-0.3) ... 1744s Selecting previously unselected package libpcre2-16-0:arm64. 1744s Preparing to unpack .../148-libpcre2-16-0_10.42-4ubuntu3_arm64.deb ... 1744s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu3) ... 1744s Selecting previously unselected package libpcre2-32-0:arm64. 1744s Preparing to unpack .../149-libpcre2-32-0_10.42-4ubuntu3_arm64.deb ... 1744s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu3) ... 1744s Selecting previously unselected package libpcre2-posix3:arm64. 1744s Preparing to unpack .../150-libpcre2-posix3_10.42-4ubuntu3_arm64.deb ... 1744s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu3) ... 1744s Selecting previously unselected package libpcre2-dev:arm64. 1744s Preparing to unpack .../151-libpcre2-dev_10.42-4ubuntu3_arm64.deb ... 1744s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu3) ... 1744s Selecting previously unselected package libpkgconf3:arm64. 1744s Preparing to unpack .../152-libpkgconf3_1.8.1-4_arm64.deb ... 1744s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 1744s Selecting previously unselected package zlib1g-dev:arm64. 1744s Preparing to unpack .../153-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 1744s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1744s Selecting previously unselected package libpng-dev:arm64. 1744s Preparing to unpack .../154-libpng-dev_1.6.44-3_arm64.deb ... 1744s Unpacking libpng-dev:arm64 (1.6.44-3) ... 1744s Selecting previously unselected package libreadline-dev:arm64. 1744s Preparing to unpack .../155-libreadline-dev_8.2-6_arm64.deb ... 1744s Unpacking libreadline-dev:arm64 (8.2-6) ... 1744s Selecting previously unselected package libsm6:arm64. 1744s Preparing to unpack .../156-libsm6_2%3a1.2.4-1_arm64.deb ... 1744s Unpacking libsm6:arm64 (2:1.2.4-1) ... 1744s Selecting previously unselected package libtcl8.6:arm64. 1744s Preparing to unpack .../157-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 1744s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 1744s Selecting previously unselected package libxft2:arm64. 1745s Preparing to unpack .../158-libxft2_2.3.6-1build1_arm64.deb ... 1745s Unpacking libxft2:arm64 (2.3.6-1build1) ... 1745s Selecting previously unselected package libxss1:arm64. 1745s Preparing to unpack .../159-libxss1_1%3a1.2.3-1build3_arm64.deb ... 1745s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 1745s Selecting previously unselected package libtk8.6:arm64. 1745s Preparing to unpack .../160-libtk8.6_8.6.16-1_arm64.deb ... 1745s Unpacking libtk8.6:arm64 (8.6.16-1) ... 1745s Selecting previously unselected package libudunits2-data. 1745s Preparing to unpack .../161-libudunits2-data_2.2.28-7build1_all.deb ... 1745s Unpacking libudunits2-data (2.2.28-7build1) ... 1745s Selecting previously unselected package libudunits2-0. 1745s Preparing to unpack .../162-libudunits2-0_2.2.28-7build1_arm64.deb ... 1745s Unpacking libudunits2-0 (2.2.28-7build1) ... 1745s Selecting previously unselected package libxt6t64:arm64. 1745s Preparing to unpack .../163-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 1745s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 1745s Selecting previously unselected package zip. 1745s Preparing to unpack .../164-zip_3.0-14ubuntu2_arm64.deb ... 1745s Unpacking zip (3.0-14ubuntu2) ... 1745s Selecting previously unselected package unzip. 1745s Preparing to unpack .../165-unzip_6.0-28ubuntu6_arm64.deb ... 1745s Unpacking unzip (6.0-28ubuntu6) ... 1745s Selecting previously unselected package xdg-utils. 1745s Preparing to unpack .../166-xdg-utils_1.2.1-0ubuntu1_all.deb ... 1745s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 1745s Selecting previously unselected package r-base-core. 1745s Preparing to unpack .../167-r-base-core_4.4.2-1build1_arm64.deb ... 1745s Unpacking r-base-core (4.4.2-1build1) ... 1745s Selecting previously unselected package r-cran-littler. 1745s Preparing to unpack .../168-r-cran-littler_0.3.20-2_arm64.deb ... 1745s Unpacking r-cran-littler (0.3.20-2) ... 1745s Selecting previously unselected package littler. 1745s Preparing to unpack .../169-littler_0.3.20-2_all.deb ... 1745s Unpacking littler (0.3.20-2) ... 1745s Selecting previously unselected package node-bootstrap-sass. 1745s Preparing to unpack .../170-node-bootstrap-sass_3.4.3-2_all.deb ... 1745s Unpacking node-bootstrap-sass (3.4.3-2) ... 1745s Selecting previously unselected package node-html5shiv. 1745s Preparing to unpack .../171-node-html5shiv_3.7.3+dfsg-5_all.deb ... 1745s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 1746s Selecting previously unselected package node-normalize.css. 1746s Preparing to unpack .../172-node-normalize.css_8.0.1-5_all.deb ... 1746s Unpacking node-normalize.css (8.0.1-5) ... 1746s Selecting previously unselected package pandoc-data. 1746s Preparing to unpack .../173-pandoc-data_3.1.11.1-3build1_all.deb ... 1746s Unpacking pandoc-data (3.1.11.1-3build1) ... 1746s Selecting previously unselected package pandoc. 1746s Preparing to unpack .../174-pandoc_3.1.11.1+ds-2_arm64.deb ... 1746s Unpacking pandoc (3.1.11.1+ds-2) ... 1747s Selecting previously unselected package liblzma-dev:arm64. 1747s Preparing to unpack .../175-liblzma-dev_5.6.3-1_arm64.deb ... 1747s Unpacking liblzma-dev:arm64 (5.6.3-1) ... 1747s Selecting previously unselected package pkgconf-bin. 1747s Preparing to unpack .../176-pkgconf-bin_1.8.1-4_arm64.deb ... 1747s Unpacking pkgconf-bin (1.8.1-4) ... 1747s Selecting previously unselected package pkgconf:arm64. 1747s Preparing to unpack .../177-pkgconf_1.8.1-4_arm64.deb ... 1747s Unpacking pkgconf:arm64 (1.8.1-4) ... 1747s Selecting previously unselected package libtirpc-dev:arm64. 1747s Preparing to unpack .../178-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 1747s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 1747s Selecting previously unselected package r-base-dev. 1747s Preparing to unpack .../179-r-base-dev_4.4.2-1build1_all.deb ... 1747s Unpacking r-base-dev (4.4.2-1build1) ... 1747s Selecting previously unselected package pkg-r-autopkgtest. 1747s Preparing to unpack .../180-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 1747s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 1747s Selecting previously unselected package r-cran-abind. 1747s Preparing to unpack .../181-r-cran-abind_1.4-8-1_all.deb ... 1747s Unpacking r-cran-abind (1.4-8-1) ... 1747s Selecting previously unselected package r-cran-cli. 1747s Preparing to unpack .../182-r-cran-cli_3.6.3-1_arm64.deb ... 1747s Unpacking r-cran-cli (3.6.3-1) ... 1747s Selecting previously unselected package r-cran-generics. 1747s Preparing to unpack .../183-r-cran-generics_0.1.3-1_all.deb ... 1747s Unpacking r-cran-generics (0.1.3-1) ... 1747s Selecting previously unselected package r-cran-glue. 1747s Preparing to unpack .../184-r-cran-glue_1.8.0-1_arm64.deb ... 1747s Unpacking r-cran-glue (1.8.0-1) ... 1747s Selecting previously unselected package r-cran-rlang. 1747s Preparing to unpack .../185-r-cran-rlang_1.1.5-1_arm64.deb ... 1747s Unpacking r-cran-rlang (1.1.5-1) ... 1747s Selecting previously unselected package r-cran-lifecycle. 1747s Preparing to unpack .../186-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 1747s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 1747s Selecting previously unselected package r-cran-magrittr. 1747s Preparing to unpack .../187-r-cran-magrittr_2.0.3-1_arm64.deb ... 1747s Unpacking r-cran-magrittr (2.0.3-1) ... 1747s Selecting previously unselected package r-cran-utf8. 1747s Preparing to unpack .../188-r-cran-utf8_1.2.4-1_arm64.deb ... 1747s Unpacking r-cran-utf8 (1.2.4-1) ... 1747s Selecting previously unselected package r-cran-vctrs. 1747s Preparing to unpack .../189-r-cran-vctrs_0.6.5-1_arm64.deb ... 1747s Unpacking r-cran-vctrs (0.6.5-1) ... 1747s Selecting previously unselected package r-cran-pillar. 1747s Preparing to unpack .../190-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 1747s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 1747s Selecting previously unselected package r-cran-r6. 1748s Preparing to unpack .../191-r-cran-r6_2.5.1-1_all.deb ... 1748s Unpacking r-cran-r6 (2.5.1-1) ... 1748s Selecting previously unselected package r-cran-fansi. 1748s Preparing to unpack .../192-r-cran-fansi_1.0.5-1_arm64.deb ... 1748s Unpacking r-cran-fansi (1.0.5-1) ... 1748s Selecting previously unselected package r-cran-pkgconfig. 1748s Preparing to unpack .../193-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 1748s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 1748s Selecting previously unselected package r-cran-tibble. 1748s Preparing to unpack .../194-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 1748s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 1748s Selecting previously unselected package r-cran-withr. 1748s Preparing to unpack .../195-r-cran-withr_3.0.2+dfsg-1_all.deb ... 1748s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 1748s Selecting previously unselected package r-cran-tidyselect. 1748s Preparing to unpack .../196-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 1748s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 1748s Selecting previously unselected package r-cran-dplyr. 1748s Preparing to unpack .../197-r-cran-dplyr_1.1.4-4_arm64.deb ... 1748s Unpacking r-cran-dplyr (1.1.4-4) ... 1748s Selecting previously unselected package r-cran-purrr. 1748s Preparing to unpack .../198-r-cran-purrr_1.0.2-1_arm64.deb ... 1748s Unpacking r-cran-purrr (1.0.2-1) ... 1748s Selecting previously unselected package r-cran-mass. 1748s Preparing to unpack .../199-r-cran-mass_7.3-64-1_arm64.deb ... 1748s Unpacking r-cran-mass (7.3-64-1) ... 1748s Selecting previously unselected package r-cran-class. 1748s Preparing to unpack .../200-r-cran-class_7.3-23-1_arm64.deb ... 1748s Unpacking r-cran-class (7.3-23-1) ... 1748s Selecting previously unselected package r-cran-proxy. 1748s Preparing to unpack .../201-r-cran-proxy_0.4-27-1_arm64.deb ... 1748s Unpacking r-cran-proxy (0.4-27-1) ... 1748s Selecting previously unselected package r-cran-e1071. 1748s Preparing to unpack .../202-r-cran-e1071_1.7-16-1_arm64.deb ... 1748s Unpacking r-cran-e1071 (1.7-16-1) ... 1748s Selecting previously unselected package r-cran-kernsmooth. 1748s Preparing to unpack .../203-r-cran-kernsmooth_2.23-26-1_arm64.deb ... 1748s Unpacking r-cran-kernsmooth (2.23-26-1) ... 1748s Selecting previously unselected package r-cran-classint. 1748s Preparing to unpack .../204-r-cran-classint_0.4-11+dfsg-1_arm64.deb ... 1748s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 1748s Selecting previously unselected package r-cran-dbi. 1748s Preparing to unpack .../205-r-cran-dbi_1.2.3-1_all.deb ... 1748s Unpacking r-cran-dbi (1.2.3-1) ... 1748s Selecting previously unselected package r-cran-pkgkitten. 1748s Preparing to unpack .../206-r-cran-pkgkitten_0.2.4-1_all.deb ... 1748s Unpacking r-cran-pkgkitten (0.2.4-1) ... 1748s Selecting previously unselected package r-cran-rcpp. 1748s Preparing to unpack .../207-r-cran-rcpp_1.0.14-1_arm64.deb ... 1748s Unpacking r-cran-rcpp (1.0.14-1) ... 1749s Selecting previously unselected package r-cran-wk. 1749s Preparing to unpack .../208-r-cran-wk_0.9.4-1_arm64.deb ... 1749s Unpacking r-cran-wk (0.9.4-1) ... 1749s Selecting previously unselected package r-cran-s2. 1749s Preparing to unpack .../209-r-cran-s2_1.1.7-1_arm64.deb ... 1749s Unpacking r-cran-s2 (1.1.7-1) ... 1749s Selecting previously unselected package r-cran-units. 1749s Preparing to unpack .../210-r-cran-units_0.8-5+dfsg-1_arm64.deb ... 1749s Unpacking r-cran-units (0.8-5+dfsg-1) ... 1749s Selecting previously unselected package r-cran-sf. 1749s Preparing to unpack .../211-r-cran-sf_1.0-19+dfsg-1_arm64.deb ... 1749s Unpacking r-cran-sf (1.0-19+dfsg-1) ... 1749s Selecting previously unselected package r-cran-areal. 1749s Preparing to unpack .../212-r-cran-areal_0.1.8+dfsg-2_all.deb ... 1749s Unpacking r-cran-areal (0.1.8+dfsg-2) ... 1749s Selecting previously unselected package r-cran-sys. 1749s Preparing to unpack .../213-r-cran-sys_3.4.3-1_arm64.deb ... 1749s Unpacking r-cran-sys (3.4.3-1) ... 1749s Selecting previously unselected package r-cran-askpass. 1749s Preparing to unpack .../214-r-cran-askpass_1.2.1-1_arm64.deb ... 1749s Unpacking r-cran-askpass (1.2.1-1) ... 1749s Selecting previously unselected package r-cran-base64enc. 1749s Preparing to unpack .../215-r-cran-base64enc_0.1-3-3_arm64.deb ... 1749s Unpacking r-cran-base64enc (0.1-3-3) ... 1749s Selecting previously unselected package r-cran-bdsmatrix. 1749s Preparing to unpack .../216-r-cran-bdsmatrix_1.3-7-1_arm64.deb ... 1749s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 1749s Selecting previously unselected package r-cran-brio. 1749s Preparing to unpack .../217-r-cran-brio_1.1.5-1_arm64.deb ... 1749s Unpacking r-cran-brio (1.1.5-1) ... 1749s Selecting previously unselected package r-cran-fastmap. 1749s Preparing to unpack .../218-r-cran-fastmap_1.2.0-1_arm64.deb ... 1749s Unpacking r-cran-fastmap (1.2.0-1) ... 1749s Selecting previously unselected package r-cran-cachem. 1749s Preparing to unpack .../219-r-cran-cachem_1.1.0-1_arm64.deb ... 1749s Unpacking r-cran-cachem (1.1.0-1) ... 1749s Selecting previously unselected package r-cran-digest. 1749s Preparing to unpack .../220-r-cran-digest_0.6.37-1_arm64.deb ... 1749s Unpacking r-cran-digest (0.6.37-1) ... 1749s Selecting previously unselected package r-cran-htmltools. 1749s Preparing to unpack .../221-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 1749s Unpacking r-cran-htmltools (0.5.8.1-1) ... 1749s Selecting previously unselected package r-cran-jquerylib. 1749s Preparing to unpack .../222-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 1749s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 1749s Selecting previously unselected package r-cran-jsonlite. 1749s Preparing to unpack .../223-r-cran-jsonlite_1.8.9+dfsg-1_arm64.deb ... 1749s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 1749s Selecting previously unselected package r-cran-memoise. 1749s Preparing to unpack .../224-r-cran-memoise_2.0.1-1_all.deb ... 1749s Unpacking r-cran-memoise (2.0.1-1) ... 1749s Selecting previously unselected package r-cran-mime. 1749s Preparing to unpack .../225-r-cran-mime_0.12-2_arm64.deb ... 1749s Unpacking r-cran-mime (0.12-2) ... 1749s Selecting previously unselected package r-cran-fs. 1750s Preparing to unpack .../226-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 1750s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 1750s Selecting previously unselected package r-cran-rappdirs. 1750s Preparing to unpack .../227-r-cran-rappdirs_0.3.3-1_arm64.deb ... 1750s Unpacking r-cran-rappdirs (0.3.3-1) ... 1750s Selecting previously unselected package r-cran-sass. 1750s Preparing to unpack .../228-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 1750s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 1750s Selecting previously unselected package r-cran-bslib. 1750s Preparing to unpack .../229-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 1750s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 1750s Selecting previously unselected package r-cran-cairo. 1750s Preparing to unpack .../230-r-cran-cairo_1.6-2-1_arm64.deb ... 1750s Unpacking r-cran-cairo (1.6-2-1) ... 1750s Selecting previously unselected package r-cran-ps. 1750s Preparing to unpack .../231-r-cran-ps_1.8.1-1_arm64.deb ... 1750s Unpacking r-cran-ps (1.8.1-1) ... 1750s Selecting previously unselected package r-cran-processx. 1750s Preparing to unpack .../232-r-cran-processx_3.8.5-1_arm64.deb ... 1750s Unpacking r-cran-processx (3.8.5-1) ... 1750s Selecting previously unselected package r-cran-callr. 1750s Preparing to unpack .../233-r-cran-callr_3.7.6-1_all.deb ... 1750s Unpacking r-cran-callr (3.7.6-1) ... 1750s Selecting previously unselected package r-cran-cluster. 1750s Preparing to unpack .../234-r-cran-cluster_2.1.8-1_arm64.deb ... 1750s Unpacking r-cran-cluster (2.1.8-1) ... 1750s Selecting previously unselected package r-cran-clue. 1750s Preparing to unpack .../235-r-cran-clue_0.3-66-1_arm64.deb ... 1750s Unpacking r-cran-clue (0.3-66-1) ... 1750s Selecting previously unselected package r-cran-codetools. 1750s Preparing to unpack .../236-r-cran-codetools_0.2-20-1_all.deb ... 1750s Unpacking r-cran-codetools (0.2-20-1) ... 1750s Selecting previously unselected package r-cran-collapse. 1750s Preparing to unpack .../237-r-cran-collapse_2.0.19-1_arm64.deb ... 1750s Unpacking r-cran-collapse (2.0.19-1) ... 1750s Selecting previously unselected package r-cran-colorspace. 1750s Preparing to unpack .../238-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 1750s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 1750s Selecting previously unselected package r-cran-commonmark. 1750s Preparing to unpack .../239-r-cran-commonmark_1.9.2-2_arm64.deb ... 1750s Unpacking r-cran-commonmark (1.9.2-2) ... 1750s Selecting previously unselected package r-cran-lazyeval. 1750s Preparing to unpack .../240-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 1750s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 1750s Selecting previously unselected package r-cran-rex. 1750s Preparing to unpack .../241-r-cran-rex_1.2.1-1_all.deb ... 1750s Unpacking r-cran-rex (1.2.1-1) ... 1750s Selecting previously unselected package r-cran-curl. 1750s Preparing to unpack .../242-r-cran-curl_6.1.0+dfsg-1_arm64.deb ... 1750s Unpacking r-cran-curl (6.1.0+dfsg-1) ... 1751s Selecting previously unselected package r-cran-openssl. 1751s Preparing to unpack .../243-r-cran-openssl_2.2.0+dfsg-1_arm64.deb ... 1751s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 1751s Selecting previously unselected package r-cran-httr. 1751s Preparing to unpack .../244-r-cran-httr_1.4.7+dfsg-1_all.deb ... 1751s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 1751s Selecting previously unselected package r-cran-crayon. 1751s Preparing to unpack .../245-r-cran-crayon_1.5.3-1_all.deb ... 1751s Unpacking r-cran-crayon (1.5.3-1) ... 1751s Selecting previously unselected package r-cran-yaml. 1751s Preparing to unpack .../246-r-cran-yaml_2.3.10-1_arm64.deb ... 1751s Unpacking r-cran-yaml (2.3.10-1) ... 1751s Selecting previously unselected package r-cran-covr. 1751s Preparing to unpack .../247-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 1751s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 1751s Selecting previously unselected package r-cran-cpp11. 1751s Preparing to unpack .../248-r-cran-cpp11_0.5.1-1_all.deb ... 1751s Unpacking r-cran-cpp11 (0.5.1-1) ... 1751s Selecting previously unselected package r-cran-deldir. 1751s Preparing to unpack .../249-r-cran-deldir_2.0-4-1build1_arm64.deb ... 1751s Unpacking r-cran-deldir (2.0-4-1build1) ... 1751s Selecting previously unselected package r-cran-desc. 1751s Preparing to unpack .../250-r-cran-desc_1.4.3-1_all.deb ... 1751s Unpacking r-cran-desc (1.4.3-1) ... 1751s Selecting previously unselected package r-cran-diffobj. 1751s Preparing to unpack .../251-r-cran-diffobj_0.3.5-1_arm64.deb ... 1751s Unpacking r-cran-diffobj (0.3.5-1) ... 1751s Selecting previously unselected package r-cran-evaluate. 1751s Preparing to unpack .../252-r-cran-evaluate_1.0.3-1_all.deb ... 1751s Unpacking r-cran-evaluate (1.0.3-1) ... 1751s Selecting previously unselected package r-cran-farver. 1751s Preparing to unpack .../253-r-cran-farver_2.1.2-1_arm64.deb ... 1751s Unpacking r-cran-farver (2.1.2-1) ... 1751s Selecting previously unselected package r-cran-fnn. 1751s Preparing to unpack .../254-r-cran-fnn_1.1.4.1-1_arm64.deb ... 1751s Unpacking r-cran-fnn (1.1.4.1-1) ... 1751s Selecting previously unselected package r-cran-fontawesome. 1751s Preparing to unpack .../255-r-cran-fontawesome_0.5.3-1_all.deb ... 1751s Unpacking r-cran-fontawesome (0.5.3-1) ... 1751s Selecting previously unselected package r-cran-formula. 1751s Preparing to unpack .../256-r-cran-formula_1.2-5-1_all.deb ... 1751s Unpacking r-cran-formula (1.2-5-1) ... 1751s Selecting previously unselected package r-cran-globals. 1751s Preparing to unpack .../257-r-cran-globals_0.16.3-1_all.deb ... 1751s Unpacking r-cran-globals (0.16.3-1) ... 1751s Selecting previously unselected package r-cran-listenv. 1751s Preparing to unpack .../258-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 1751s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 1751s Selecting previously unselected package r-cran-parallelly. 1751s Preparing to unpack .../259-r-cran-parallelly_1.41.0-1_arm64.deb ... 1751s Unpacking r-cran-parallelly (1.41.0-1) ... 1751s Selecting previously unselected package r-cran-future. 1752s Preparing to unpack .../260-r-cran-future_1.34.0+dfsg-1_all.deb ... 1752s Unpacking r-cran-future (1.34.0+dfsg-1) ... 1752s Selecting previously unselected package r-cran-future.apply. 1752s Preparing to unpack .../261-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 1752s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 1752s Selecting previously unselected package r-cran-gtable. 1752s Preparing to unpack .../262-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 1752s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 1752s Selecting previously unselected package r-cran-isoband. 1752s Preparing to unpack .../263-r-cran-isoband_0.2.7-1_arm64.deb ... 1752s Unpacking r-cran-isoband (0.2.7-1) ... 1752s Selecting previously unselected package r-cran-lattice. 1752s Preparing to unpack .../264-r-cran-lattice_0.22-6-1_arm64.deb ... 1752s Unpacking r-cran-lattice (0.22-6-1) ... 1752s Selecting previously unselected package r-cran-nlme. 1752s Preparing to unpack .../265-r-cran-nlme_3.1.167-1_arm64.deb ... 1752s Unpacking r-cran-nlme (3.1.167-1) ... 1752s Selecting previously unselected package r-cran-matrix. 1752s Preparing to unpack .../266-r-cran-matrix_1.7-2-1_arm64.deb ... 1752s Unpacking r-cran-matrix (1.7-2-1) ... 1752s Selecting previously unselected package r-cran-mgcv. 1752s Preparing to unpack .../267-r-cran-mgcv_1.9-1-1_arm64.deb ... 1752s Unpacking r-cran-mgcv (1.9-1-1) ... 1752s Selecting previously unselected package r-cran-labeling. 1752s Preparing to unpack .../268-r-cran-labeling_0.4.3-1_all.deb ... 1752s Unpacking r-cran-labeling (0.4.3-1) ... 1752s Selecting previously unselected package r-cran-munsell. 1752s Preparing to unpack .../269-r-cran-munsell_0.5.1-1_all.deb ... 1752s Unpacking r-cran-munsell (0.5.1-1) ... 1752s Selecting previously unselected package r-cran-rcolorbrewer. 1752s Preparing to unpack .../270-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 1752s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 1752s Selecting previously unselected package r-cran-viridislite. 1752s Preparing to unpack .../271-r-cran-viridislite_0.4.2-2_all.deb ... 1752s Unpacking r-cran-viridislite (0.4.2-2) ... 1752s Selecting previously unselected package r-cran-scales. 1752s Preparing to unpack .../272-r-cran-scales_1.3.0-1_all.deb ... 1752s Unpacking r-cran-scales (1.3.0-1) ... 1752s Selecting previously unselected package r-cran-ggplot2. 1752s Preparing to unpack .../273-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 1752s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 1752s Selecting previously unselected package r-cran-tweenr. 1753s Preparing to unpack .../274-r-cran-tweenr_2.0.3-1_arm64.deb ... 1753s Unpacking r-cran-tweenr (2.0.3-1) ... 1753s Selecting previously unselected package r-cran-polyclip. 1753s Preparing to unpack .../275-r-cran-polyclip_1.10-7-1_arm64.deb ... 1753s Unpacking r-cran-polyclip (1.10-7-1) ... 1753s Selecting previously unselected package r-cran-systemfonts. 1753s Preparing to unpack .../276-r-cran-systemfonts_1.2.1-1_arm64.deb ... 1753s Unpacking r-cran-systemfonts (1.2.1-1) ... 1753s Selecting previously unselected package r-cran-rcppeigen. 1753s Preparing to unpack .../277-r-cran-rcppeigen_0.3.4.0.2-1_arm64.deb ... 1753s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 1753s Selecting previously unselected package r-cran-ggforce. 1753s Preparing to unpack .../278-r-cran-ggforce_0.4.2-1_arm64.deb ... 1753s Unpacking r-cran-ggforce (0.4.2-1) ... 1753s Selecting previously unselected package r-cran-stringi. 1753s Preparing to unpack .../279-r-cran-stringi_1.8.4-1build1_arm64.deb ... 1753s Unpacking r-cran-stringi (1.8.4-1build1) ... 1753s Selecting previously unselected package r-cran-stringr. 1753s Preparing to unpack .../280-r-cran-stringr_1.5.1-1_all.deb ... 1753s Unpacking r-cran-stringr (1.5.1-1) ... 1753s Selecting previously unselected package r-cran-ggthemes. 1753s Preparing to unpack .../281-r-cran-ggthemes_5.1.0-1_all.deb ... 1753s Unpacking r-cran-ggthemes (5.1.0-1) ... 1753s Selecting previously unselected package r-cran-goftest. 1753s Preparing to unpack .../282-r-cran-goftest_1.2-3-1_arm64.deb ... 1753s Unpacking r-cran-goftest (1.2-3-1) ... 1753s Selecting previously unselected package r-cran-gridextra. 1753s Preparing to unpack .../283-r-cran-gridextra_2.3-3build1_all.deb ... 1753s Unpacking r-cran-gridextra (2.3-3build1) ... 1753s Selecting previously unselected package r-cran-xfun. 1753s Preparing to unpack .../284-r-cran-xfun_0.50+dfsg-1_arm64.deb ... 1753s Unpacking r-cran-xfun (0.50+dfsg-1) ... 1753s Selecting previously unselected package r-cran-highr. 1753s Preparing to unpack .../285-r-cran-highr_0.11+dfsg-1_all.deb ... 1753s Unpacking r-cran-highr (0.11+dfsg-1) ... 1753s Selecting previously unselected package r-cran-later. 1753s Preparing to unpack .../286-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 1753s Unpacking r-cran-later (1.4.1+dfsg-1) ... 1753s Selecting previously unselected package r-cran-promises. 1753s Preparing to unpack .../287-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 1753s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 1753s Selecting previously unselected package r-cran-httpuv. 1754s Preparing to unpack .../288-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 1754s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 1754s Selecting previously unselected package r-cran-intervals. 1754s Preparing to unpack .../289-r-cran-intervals_0.15.5-1_arm64.deb ... 1754s Unpacking r-cran-intervals (0.15.5-1) ... 1754s Selecting previously unselected package libjs-mathjax. 1754s Preparing to unpack .../290-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 1754s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 1754s Selecting previously unselected package r-cran-knitr. 1754s Preparing to unpack .../291-r-cran-knitr_1.49+dfsg-1_all.deb ... 1754s Unpacking r-cran-knitr (1.49+dfsg-1) ... 1754s Selecting previously unselected package r-cran-zoo. 1754s Preparing to unpack .../292-r-cran-zoo_1.8-12-2_arm64.deb ... 1754s Unpacking r-cran-zoo (1.8-12-2) ... 1754s Selecting previously unselected package r-cran-lmtest. 1754s Preparing to unpack .../293-r-cran-lmtest_0.9.40-1_arm64.deb ... 1754s Unpacking r-cran-lmtest (0.9.40-1) ... 1754s Selecting previously unselected package r-cran-lwgeom. 1754s Preparing to unpack .../294-r-cran-lwgeom_0.2-14-1_arm64.deb ... 1754s Unpacking r-cran-lwgeom (0.2-14-1) ... 1755s Selecting previously unselected package r-cran-maps. 1755s Preparing to unpack .../295-r-cran-maps_3.4.2-1_arm64.deb ... 1755s Unpacking r-cran-maps (3.4.2-1) ... 1755s Selecting previously unselected package r-cran-mapdata. 1755s Preparing to unpack .../296-r-cran-mapdata_2.3.1-1_arm64.deb ... 1755s Unpacking r-cran-mapdata (2.3.1-1) ... 1755s Selecting previously unselected package r-cran-misctools. 1755s Preparing to unpack .../297-r-cran-misctools_0.6-28-1_all.deb ... 1755s Unpacking r-cran-misctools (0.6-28-1) ... 1755s Selecting previously unselected package r-cran-sandwich. 1755s Preparing to unpack .../298-r-cran-sandwich_3.1-1-1_all.deb ... 1755s Unpacking r-cran-sandwich (3.1-1-1) ... 1755s Selecting previously unselected package r-cran-maxlik. 1755s Preparing to unpack .../299-r-cran-maxlik_1.5-2.1-1_all.deb ... 1755s Unpacking r-cran-maxlik (1.5-2.1-1) ... 1755s Selecting previously unselected package r-cran-rnetcdf. 1755s Preparing to unpack .../300-r-cran-rnetcdf_2.9-1-1build2_arm64.deb ... 1755s Unpacking r-cran-rnetcdf (2.9-1-1build2) ... 1755s Selecting previously unselected package r-cran-tidyr. 1755s Preparing to unpack .../301-r-cran-tidyr_1.3.1-1_arm64.deb ... 1755s Unpacking r-cran-tidyr (1.3.1-1) ... 1755s Selecting previously unselected package r-cran-ncmeta. 1755s Preparing to unpack .../302-r-cran-ncmeta_0.3.6-1_all.deb ... 1755s Unpacking r-cran-ncmeta (0.3.6-1) ... 1755s Selecting previously unselected package r-cran-stars. 1756s Preparing to unpack .../303-r-cran-stars_0.6-7-1_all.deb ... 1756s Unpacking r-cran-stars (0.6-7-1) ... 1756s Selecting previously unselected package r-cran-ncdfgeom. 1756s Preparing to unpack .../304-r-cran-ncdfgeom_1.1.6+dfsg-1_all.deb ... 1756s Unpacking r-cran-ncdfgeom (1.1.6+dfsg-1) ... 1756s Selecting previously unselected package r-cran-pbapply. 1756s Preparing to unpack .../305-r-cran-pbapply_1.7-2-1_all.deb ... 1756s Unpacking r-cran-pbapply (1.7-2-1) ... 1756s Selecting previously unselected package r-cran-pcict. 1756s Preparing to unpack .../306-r-cran-pcict_0.5-4.4-1_arm64.deb ... 1756s Unpacking r-cran-pcict (0.5-4.4-1) ... 1756s Selecting previously unselected package r-cran-pkgbuild. 1756s Preparing to unpack .../307-r-cran-pkgbuild_1.4.6-1_all.deb ... 1756s Unpacking r-cran-pkgbuild (1.4.6-1) ... 1756s Selecting previously unselected package r-cran-rprojroot. 1756s Preparing to unpack .../308-r-cran-rprojroot_2.0.4-2_all.deb ... 1756s Unpacking r-cran-rprojroot (2.0.4-2) ... 1756s Selecting previously unselected package r-cran-pkgload. 1756s Preparing to unpack .../309-r-cran-pkgload_1.4.0-1_all.deb ... 1756s Unpacking r-cran-pkgload (1.4.0-1) ... 1756s Selecting previously unselected package r-cran-rbibutils. 1756s Preparing to unpack .../310-r-cran-rbibutils_2.3-1_arm64.deb ... 1756s Unpacking r-cran-rbibutils (2.3-1) ... 1756s Selecting previously unselected package r-cran-rdpack. 1756s Preparing to unpack .../311-r-cran-rdpack_2.6.2-1_all.deb ... 1756s Unpacking r-cran-rdpack (2.6.2-1) ... 1756s Selecting previously unselected package r-cran-plm. 1756s Preparing to unpack .../312-r-cran-plm_2.6-5-1_all.deb ... 1756s Unpacking r-cran-plm (2.6-5-1) ... 1756s Selecting previously unselected package r-cran-praise. 1756s Preparing to unpack .../313-r-cran-praise_1.0.0-4build1_all.deb ... 1756s Unpacking r-cran-praise (1.0.0-4build1) ... 1756s Selecting previously unselected package r-cran-randomforest. 1756s Preparing to unpack .../314-r-cran-randomforest_4.7-1.2-1_arm64.deb ... 1756s Unpacking r-cran-randomforest (4.7-1.2-1) ... 1756s Selecting previously unselected package r-cran-sp. 1756s Preparing to unpack .../315-r-cran-sp_1%3a2.1-4+dfsg-1_arm64.deb ... 1756s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 1756s Selecting previously unselected package r-cran-terra. 1756s Preparing to unpack .../316-r-cran-terra_1.8-10-1_arm64.deb ... 1756s Unpacking r-cran-terra (1.8-10-1) ... 1756s Selecting previously unselected package r-cran-raster. 1757s Preparing to unpack .../317-r-cran-raster_3.6-31-1_arm64.deb ... 1757s Unpacking r-cran-raster (3.6-31-1) ... 1757s Selecting previously unselected package r-cran-tinytex. 1757s Preparing to unpack .../318-r-cran-tinytex_0.54-1_all.deb ... 1757s Unpacking r-cran-tinytex (0.54-1) ... 1757s Selecting previously unselected package libjs-modernizr. 1757s Preparing to unpack .../319-libjs-modernizr_3.13.0-0.1_all.deb ... 1757s Unpacking libjs-modernizr (3.13.0-0.1) ... 1757s Selecting previously unselected package r-cran-xtable. 1757s Preparing to unpack .../320-r-cran-xtable_1%3a1.8-4-2_all.deb ... 1757s Unpacking r-cran-xtable (1:1.8-4-2) ... 1757s Selecting previously unselected package r-cran-sourcetools. 1757s Preparing to unpack .../321-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 1757s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 1757s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 1757s Preparing to unpack .../322-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 1757s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1757s Selecting previously unselected package r-cran-shiny. 1757s Preparing to unpack .../323-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 1757s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 1757s Selecting previously unselected package r-cran-rmarkdown. 1757s Preparing to unpack .../324-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 1757s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 1757s Selecting previously unselected package r-cran-survival. 1757s Preparing to unpack .../325-r-cran-survival_3.8-3-1_arm64.deb ... 1757s Unpacking r-cran-survival (3.8-3-1) ... 1757s Selecting previously unselected package r-cran-rpart. 1757s Preparing to unpack .../326-r-cran-rpart_4.1.24-1_arm64.deb ... 1757s Unpacking r-cran-rpart (4.1.24-1) ... 1757s Selecting previously unselected package r-cran-xts. 1757s Preparing to unpack .../327-r-cran-xts_0.14.1-1_arm64.deb ... 1757s Unpacking r-cran-xts (0.14.1-1) ... 1757s Selecting previously unselected package r-cran-spacetime. 1757s Preparing to unpack .../328-r-cran-spacetime_1.3-2-2_all.deb ... 1757s Unpacking r-cran-spacetime (1.3-2-2) ... 1757s Selecting previously unselected package r-cran-spatstat.utils. 1757s Preparing to unpack .../329-r-cran-spatstat.utils_3.1-2-1_arm64.deb ... 1757s Unpacking r-cran-spatstat.utils (3.1-2-1) ... 1757s Selecting previously unselected package r-cran-spatstat.data. 1757s Preparing to unpack .../330-r-cran-spatstat.data_3.1-4-1_all.deb ... 1757s Unpacking r-cran-spatstat.data (3.1-4-1) ... 1758s Selecting previously unselected package r-cran-spatstat.geom. 1758s Preparing to unpack .../331-r-cran-spatstat.geom_3.2-9-2_arm64.deb ... 1758s Unpacking r-cran-spatstat.geom (3.2-9-2) ... 1758s Selecting previously unselected package r-cran-spatstat.random. 1758s Preparing to unpack .../332-r-cran-spatstat.random_3.2-3-1_arm64.deb ... 1758s Unpacking r-cran-spatstat.random (3.2-3-1) ... 1758s Selecting previously unselected package r-cran-tensor. 1758s Preparing to unpack .../333-r-cran-tensor_1.5-4_all.deb ... 1758s Unpacking r-cran-tensor (1.5-4) ... 1758s Selecting previously unselected package r-cran-spatstat.sparse. 1758s Preparing to unpack .../334-r-cran-spatstat.sparse_3.1-0-1_arm64.deb ... 1758s Unpacking r-cran-spatstat.sparse (3.1-0-1) ... 1758s Selecting previously unselected package r-cran-spatstat.explore. 1758s Preparing to unpack .../335-r-cran-spatstat.explore_3.2-7-1_arm64.deb ... 1758s Unpacking r-cran-spatstat.explore (3.2-7-1) ... 1758s Selecting previously unselected package r-cran-spatstat.model. 1758s Preparing to unpack .../336-r-cran-spatstat.model_3.2-11-1_arm64.deb ... 1758s Unpacking r-cran-spatstat.model (3.2-11-1) ... 1758s Selecting previously unselected package r-cran-spatstat.linnet. 1758s Preparing to unpack .../337-r-cran-spatstat.linnet_3.1-5-1_arm64.deb ... 1758s Unpacking r-cran-spatstat.linnet (3.1-5-1) ... 1758s Selecting previously unselected package r-cran-spatstat. 1758s Preparing to unpack .../338-r-cran-spatstat_3.0-8-1_arm64.deb ... 1758s Unpacking r-cran-spatstat (3.0-8-1) ... 1758s Selecting previously unselected package r-cran-waldo. 1758s Preparing to unpack .../339-r-cran-waldo_0.6.1-1_all.deb ... 1758s Unpacking r-cran-waldo (0.6.1-1) ... 1758s Selecting previously unselected package r-cran-testthat. 1758s Preparing to unpack .../340-r-cran-testthat_3.2.3-1_arm64.deb ... 1758s Unpacking r-cran-testthat (3.2.3-1) ... 1758s Selecting previously unselected package r-cran-viridis. 1758s Preparing to unpack .../341-r-cran-viridis_0.6.5-1_all.deb ... 1758s Unpacking r-cran-viridis (0.6.5-1) ... 1758s Setting up libjs-json (0~20221030+~1.0.8-1) ... 1758s Setting up javascript-common (11+nmu1) ... 1758s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 1758s Setting up liblcms2-2:arm64 (2.16-2) ... 1758s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 1758s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 1758s Setting up libgpgmepp6t64:arm64 (1.24.1-2ubuntu1) ... 1758s Setting up libaom3:arm64 (3.11.0-1) ... 1758s Setting up mysql-common (5.8+1.1.1) ... 1758s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode 1758s Setting up libncurses-dev:arm64 (6.5-2) ... 1758s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 1758s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 1758s Setting up proj-data (9.5.1-1) ... 1758s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 1758s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 1758s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 1758s Setting up libjs-popper.js (1.16.1+ds-6) ... 1758s Setting up libogdi4.1:arm64 (4.1.1+ds-5) ... 1758s Setting up libxcb-render0:arm64 (1.17.0-2) ... 1758s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 1758s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1758s Setting up unzip (6.0-28ubuntu6) ... 1758s Setting up libgeos3.13.0:arm64 (3.13.0-1) ... 1758s Setting up x11-common (1:7.7+23ubuntu3) ... 1759s Setting up node-html5shiv (3.7.3+dfsg-5) ... 1759s Setting up libpq5:arm64 (17.2-1build2) ... 1759s Setting up libdeflate0:arm64 (1.23-1) ... 1759s Setting up libqhull-r8.0:arm64 (2020.2-6build1) ... 1759s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 1759s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 1759s Setting up libreadline-dev:arm64 (8.2-6) ... 1759s Setting up libxerces-c3.2t64:arm64 (3.2.4+debian-1.3build1) ... 1759s Setting up libgomp1:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up libjs-modernizr (3.13.0-0.1) ... 1759s Setting up libmysqlclient24:arm64 (8.4.4-0ubuntu1) ... 1759s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 1759s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu3) ... 1759s Setting up libaec0:arm64 (1.1.3-1) ... 1759s Setting up gdal-data (3.10.1+dfsg-1build2) ... 1759s Setting up libsnappy1v5:arm64 (1.2.1-1) ... 1759s Setting up libjs-es5-shim (4.6.7-2) ... 1759s Setting up zip (3.0-14ubuntu2) ... 1759s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu3) ... 1759s Setting up libblas3:arm64 (3.12.0-4) ... 1759s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 1759s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 1759s Setting up libpkgconf3:arm64 (1.8.1-4) ... 1759s Setting up libcfitsio10t64:arm64 (4.5.0-5) ... 1759s Setting up libsvtav1enc2:arm64 (2.3.0+dfsg-1) ... 1759s Setting up libjs-d3 (3.5.17-4) ... 1759s Setting up fonts-dejavu-mono (2.37-8) ... 1759s Setting up libmpc3:arm64 (1.3.1-1build2) ... 1759s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ... 1759s Setting up icu-devtools (76.1-1ubuntu2) ... 1759s Setting up fonts-dejavu-core (2.37-8) ... 1759s Setting up unixodbc-common (2.3.12-2ubuntu1) ... 1759s Setting up pkgconf-bin (1.8.1-4) ... 1759s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 1759s Setting up libltdl7:arm64 (2.5.4-2.1) ... 1759s Setting up libgfortran5:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up libwebp7:arm64 (1.5.0-0.1) ... 1759s Setting up liblzma-dev:arm64 (5.6.3-1) ... 1759s Setting up libubsan1:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up libgif7:arm64 (5.2.2-1ubuntu1) ... 1759s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1759s Setting up libodbc2:arm64 (2.3.12-2ubuntu1) ... 1759s Setting up liburiparser1:arm64 (0.9.8+dfsg-2) ... 1759s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu3) ... 1759s Setting up libfyba0t64:arm64 (4.1.1-11build1) ... 1759s Setting up libudunits2-data (2.2.28-7build1) ... 1759s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 1759s Setting up libdav1d7:arm64 (1.5.1-1) ... 1759s Setting up libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1759s Setting up libhwasan0:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up librav1e0.7:arm64 (0.7.1-9) ... 1759s Setting up libasan8:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up libblosc1:arm64 (1.21.5+ds-1build1) ... 1759s Setting up liblua5.4-0:arm64 (5.4.7-1) ... 1759s Setting up libopenjp2-7:arm64 (2.5.0-2ubuntu3) ... 1759s Setting up libharfbuzz0b:arm64 (10.2.0-1) ... 1759s Setting up libthai-data (0.1.29-2build1) ... 1759s Setting up node-bootstrap-sass (3.4.3-2) ... 1759s Setting up libabsl20230802:arm64 (20230802.1-4ubuntu2) ... 1759s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 1759s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 1759s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 1759s Setting up libpaper2:arm64 (2.2.5-0.3) ... 1759s Setting up pandoc-data (3.1.11.1-3build1) ... 1759s Setting up libtsan2:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1759s Setting up libisl23:arm64 (0.27-1) ... 1759s Setting up libde265-0:arm64 (1.0.15-1build4) ... 1759s Setting up libkmlbase1t64:arm64 (1.3.0-12build1) ... 1759s Setting up libdeflate-dev:arm64 (1.23-1) ... 1759s Setting up node-normalize.css (8.0.1-5) ... 1759s Setting up libicu-dev:arm64 (76.1-1ubuntu2) ... 1759s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 1759s Setting up xdg-utils (1.2.1-0ubuntu1) ... 1759s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 1759s Setting up libcc1-0:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up liblsan0:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up libblas-dev:arm64 (3.12.0-4) ... 1759s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 1759s Setting up libsz2:arm64 (1.1.3-1) ... 1759s Setting up dctrl-tools (2.24-3build3) ... 1759s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 1759s Setting up libitm1:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up gdal-plugins:arm64 (3.10.1+dfsg-1build2) ... 1759s Setting up libbz2-dev:arm64 (1.0.8-6) ... 1759s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1759s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 1759s Setting up libice6:arm64 (2:1.1.1-1) ... 1759s Setting up libodbcinst2:arm64 (2.3.12-2ubuntu1) ... 1759s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 1759s Setting up liblapack3:arm64 (3.12.0-4) ... 1759s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 1759s Setting up libudunits2-0 (2.2.28-7build1) ... 1759s Setting up libarpack2t64:arm64 (3.9.1-4) ... 1759s Setting up libpcre2-dev:arm64 (10.42-4ubuntu3) ... 1759s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 1759s Setting up libgeos-c1t64:arm64 (3.13.0-1) ... 1759s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1759s Setting up libpng-dev:arm64 (1.6.44-3) ... 1759s Setting up libpaper-utils (2.2.5-0.3) ... 1759s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 1759s Setting up pkgconf:arm64 (1.8.1-4) ... 1759s Setting up libkmldom1t64:arm64 (1.3.0-12build1) ... 1759s Setting up libthai0:arm64 (0.1.29-2build1) ... 1759s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 1759s Setting up pandoc (3.1.11.1+ds-2) ... 1759s Setting up liblapack-dev:arm64 (3.12.0-4) ... 1759s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 1759s Setting up libgav1-1:arm64 (0.19.0-3) ... 1759s Setting up libhdf4-0-alt:arm64 (4.3.0-1) ... 1759s Setting up librttopo1:arm64 (1.1.0-3build2) ... 1759s Setting up libhdf5-310:arm64 (1.14.5+repack-3) ... 1759s Setting up libfreexl1:arm64 (2.0.0-1build2) ... 1759s Setting up cpp-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1759s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 1759s Setting up libarmadillo14 (1:14.2.1+dfsg-1) ... 1759s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 1759s Setting up libgcc-14-dev:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 1759s Setting up libstdc++-14-dev:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up libyuv0:arm64 (0.0.1899.20250103-1) ... 1759s Setting up libsm6:arm64 (2:1.2.4-1) ... 1759s Setting up libpoppler145:arm64 (25.01.0-2) ... 1759s Setting up libgfortran-14-dev:arm64 (14.2.0-13ubuntu1) ... 1759s Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 1759s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 1761s Regenerating fonts cache... done. 1761s Setting up libavif16:arm64 (1.1.1-1ubuntu1) ... 1761s Setting up libnetcdf19t64:arm64 (1:4.9.2-6ubuntu2) ... 1762s Setting up libxft2:arm64 (2.3.6-1build1) ... 1762s Setting up libproj25:arm64 (9.5.1-1) ... 1762s Setting up libtk8.6:arm64 (8.6.16-1) ... 1762s Setting up libpango-1.0-0:arm64 (1.56.1-1) ... 1762s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 1762s Setting up libkmlengine1t64:arm64 (1.3.0-12build1) ... 1762s Setting up libcairo2:arm64 (1.18.2-2) ... 1762s Setting up libgeotiff5:arm64 (1.7.3-1) ... 1762s Setting up cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1762s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 1762s Setting up cpp-14 (14.2.0-13ubuntu1) ... 1762s Setting up cpp (4:14.1.0-2ubuntu1) ... 1762s Setting up gcc-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1762s Setting up libpangoft2-1.0-0:arm64 (1.56.1-1) ... 1762s Setting up libpangocairo-1.0-0:arm64 (1.56.1-1) ... 1762s Setting up libspatialite8t64:arm64 (5.1.0-3build1) ... 1762s Setting up gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1762s Setting up g++-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1762s Setting up gcc-14 (14.2.0-13ubuntu1) ... 1762s Setting up r-base-core (4.4.2-1build1) ... 1762s Creating config file /etc/R/Renviron with new version 1762s Setting up r-cran-crayon (1.5.3-1) ... 1762s Setting up r-cran-labeling (0.4.3-1) ... 1762s Setting up r-cran-sourcetools (0.1.7-1-1) ... 1762s Setting up r-cran-lattice (0.22-6-1) ... 1762s Setting up r-cran-ps (1.8.1-1) ... 1762s Setting up r-cran-nlme (3.1.167-1) ... 1762s Setting up r-cran-farver (2.1.2-1) ... 1762s Setting up r-cran-pbapply (1.7-2-1) ... 1762s Setting up r-cran-formula (1.2-5-1) ... 1762s Setting up r-cran-intervals (0.15.5-1) ... 1762s Setting up r-cran-spatstat.utils (3.1-2-1) ... 1762s Setting up r-cran-viridislite (0.4.2-2) ... 1762s Setting up r-cran-cluster (2.1.8-1) ... 1762s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1762s Setting up g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1762s Setting up gfortran-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1762s Setting up r-cran-tensor (1.5-4) ... 1762s Setting up r-cran-lazyeval (0.2.2-1build1) ... 1762s Setting up r-cran-wk (0.9.4-1) ... 1762s Setting up r-cran-commonmark (1.9.2-2) ... 1762s Setting up g++-14 (14.2.0-13ubuntu1) ... 1762s Setting up r-cran-proxy (0.4-27-1) ... 1762s Setting up r-cran-r6 (2.5.1-1) ... 1762s Setting up r-cran-pkgkitten (0.2.4-1) ... 1762s Setting up gfortran-14 (14.2.0-13ubuntu1) ... 1762s Setting up r-cran-magrittr (2.0.3-1) ... 1762s Setting up r-cran-rappdirs (0.3.3-1) ... 1762s Setting up r-cran-littler (0.3.20-2) ... 1762s Setting up r-cran-fs (1.6.5+dfsg-1) ... 1762s Setting up r-cran-rcpp (1.0.14-1) ... 1762s Setting up r-cran-curl (6.1.0+dfsg-1) ... 1762s Setting up r-cran-codetools (0.2-20-1) ... 1762s Setting up r-cran-brio (1.1.5-1) ... 1762s Setting up r-cran-diffobj (0.3.5-1) ... 1762s Setting up r-cran-maps (3.4.2-1) ... 1762s Setting up r-cran-rlang (1.1.5-1) ... 1762s Setting up r-cran-listenv (0.9.1+dfsg-1) ... 1762s Setting up littler (0.3.20-2) ... 1762s Setting up r-cran-xfun (0.50+dfsg-1) ... 1762s Setting up r-cran-sys (3.4.3-1) ... 1762s Setting up r-cran-withr (3.0.2+dfsg-1) ... 1762s Setting up r-cran-processx (3.8.5-1) ... 1762s Setting up r-cran-mime (0.12-2) ... 1762s Setting up r-cran-praise (1.0.0-4build1) ... 1762s Setting up r-cran-generics (0.1.3-1) ... 1762s Setting up r-cran-base64enc (0.1-3-3) ... 1762s Setting up r-cran-abind (1.4-8-1) ... 1762s Setting up r-cran-s2 (1.1.7-1) ... 1762s Setting up r-cran-digest (0.6.37-1) ... 1762s Setting up r-cran-yaml (2.3.10-1) ... 1762s Setting up r-cran-evaluate (1.0.3-1) ... 1762s Setting up r-cran-dbi (1.2.3-1) ... 1762s Setting up r-cran-highr (0.11+dfsg-1) ... 1762s Setting up r-cran-fansi (1.0.5-1) ... 1762s Setting up r-cran-pcict (0.5-4.4-1) ... 1762s Setting up r-cran-mass (7.3-64-1) ... 1762s Setting up r-cran-cairo (1.6-2-1) ... 1762s Setting up r-cran-mapdata (2.3.1-1) ... 1762s Setting up r-cran-collapse (2.0.19-1) ... 1762s Setting up r-cran-bdsmatrix (1.3-7-1) ... 1762s Setting up r-cran-glue (1.8.0-1) ... 1762s Setting up r-cran-xtable (1:1.8-4-2) ... 1762s Setting up r-cran-polyclip (1.10-7-1) ... 1762s Setting up r-cran-clue (0.3-66-1) ... 1762s Setting up r-cran-cli (3.6.3-1) ... 1762s Setting up r-cran-rbibutils (2.3-1) ... 1762s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 1762s Setting up r-cran-rprojroot (2.0.4-2) ... 1762s Setting up r-cran-fnn (1.1.4.1-1) ... 1762s Setting up gcc (4:14.1.0-2ubuntu1) ... 1762s Setting up r-cran-deldir (2.0-4-1build1) ... 1762s Setting up r-cran-goftest (1.2-3-1) ... 1762s Setting up r-cran-randomforest (4.7-1.2-1) ... 1762s Setting up r-cran-askpass (1.2.1-1) ... 1762s Setting up r-cran-fastmap (1.2.0-1) ... 1762s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ... 1762s Setting up r-cran-rnetcdf (2.9-1-1build2) ... 1762s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 1762s Setting up r-cran-sp (1:2.1-4+dfsg-1) ... 1762s Setting up r-cran-utf8 (1.2.4-1) ... 1762s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 1762s Setting up r-cran-parallelly (1.41.0-1) ... 1762s Setting up r-cran-stringi (1.8.4-1build1) ... 1762s Setting up r-cran-rex (1.2.1-1) ... 1762s Setting up r-cran-cpp11 (0.5.1-1) ... 1762s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 1762s Setting up r-cran-isoband (0.2.7-1) ... 1762s Setting up r-cran-waldo (0.6.1-1) ... 1762s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 1762s Setting up r-cran-zoo (1.8-12-2) ... 1762s Setting up r-cran-units (0.8-5+dfsg-1) ... 1762s Setting up r-cran-later (1.4.1+dfsg-1) ... 1762s Setting up r-cran-matrix (1.7-2-1) ... 1762s Setting up r-cran-spatstat.sparse (3.1-0-1) ... 1762s Setting up r-cran-htmltools (0.5.8.1-1) ... 1762s Setting up r-cran-tinytex (0.54-1) ... 1762s Setting up r-cran-kernsmooth (2.23-26-1) ... 1762s Setting up r-cran-knitr (1.49+dfsg-1) ... 1762s Setting up r-cran-mgcv (1.9-1-1) ... 1762s Setting up g++ (4:14.1.0-2ubuntu1) ... 1762s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1762s Setting up r-cran-cachem (1.1.0-1) ... 1762s Setting up r-cran-lmtest (0.9.40-1) ... 1762s Setting up r-cran-sass (0.4.9+dfsg-1) ... 1762s Setting up build-essential (12.10ubuntu1) ... 1762s Setting up r-cran-globals (0.16.3-1) ... 1762s Setting up r-cran-vctrs (0.6.5-1) ... 1762s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... 1762s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 1762s Setting up r-cran-openssl (2.2.0+dfsg-1) ... 1762s Setting up r-cran-misctools (0.6-28-1) ... 1762s Setting up r-cran-stringr (1.5.1-1) ... 1762s Setting up r-cran-class (7.3-23-1) ... 1762s Setting up r-cran-callr (3.7.6-1) ... 1762s Setting up r-cran-desc (1.4.3-1) ... 1762s Setting up r-cran-munsell (0.5.1-1) ... 1762s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 1762s Setting up r-cran-sandwich (3.1-1-1) ... 1762s Setting up r-cran-fontawesome (0.5.3-1) ... 1762s Setting up r-cran-survival (3.8-3-1) ... 1762s Setting up r-cran-xts (0.14.1-1) ... 1762s Setting up r-cran-rdpack (2.6.2-1) ... 1762s Setting up r-cran-tweenr (2.0.3-1) ... 1762s Setting up r-cran-future (1.34.0+dfsg-1) ... 1762s Setting up gfortran (4:14.1.0-2ubuntu1) ... 1762s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 1762s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 1762s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 1762s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 1762s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 1762s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 1762s Setting up r-cran-future.apply (1.11.3+dfsg-1) ... 1762s Setting up r-cran-systemfonts (1.2.1-1) ... 1762s Setting up r-cran-httr (1.4.7+dfsg-1) ... 1762s Setting up r-cran-gridextra (2.3-3build1) ... 1762s Setting up r-cran-scales (1.3.0-1) ... 1762s Setting up r-cran-memoise (2.0.1-1) ... 1762s Setting up r-cran-covr (3.6.4+dfsg-1) ... 1762s Setting up r-cran-promises (1.3.2+dfsg-1) ... 1762s Setting up r-cran-purrr (1.0.2-1) ... 1762s Setting up r-cran-e1071 (1.7-16-1) ... 1762s Setting up r-cran-spatstat.data (3.1-4-1) ... 1762s Setting up r-cran-maxlik (1.5-2.1-1) ... 1762s Setting up r-cran-spacetime (1.3-2-2) ... 1762s Setting up r-cran-spatstat.geom (3.2-9-2) ... 1762s Setting up r-cran-pkgbuild (1.4.6-1) ... 1762s Setting up r-cran-dplyr (1.1.4-4) ... 1762s Setting up r-cran-pkgload (1.4.0-1) ... 1762s Setting up r-base-dev (4.4.2-1build1) ... 1762s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 1762s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 1762s Setting up r-cran-rpart (4.1.24-1) ... 1762s Setting up r-cran-spatstat.random (3.2-3-1) ... 1762s Setting up r-cran-plm (2.6-5-1) ... 1762s Setting up r-cran-viridis (0.6.5-1) ... 1762s Setting up r-cran-testthat (3.2.3-1) ... 1762s Setting up r-cran-classint (0.4-11+dfsg-1) ... 1762s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 1762s Setting up r-cran-spatstat.explore (3.2-7-1) ... 1762s Setting up r-cran-ggthemes (5.1.0-1) ... 1762s Setting up r-cran-tidyr (1.3.1-1) ... 1762s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 1762s Setting up r-cran-ggforce (0.4.2-1) ... 1762s Setting up r-cran-spatstat.model (3.2-11-1) ... 1762s Setting up r-cran-shiny (1.9.1+dfsg-1) ... 1762s Setting up r-cran-ncmeta (0.3.6-1) ... 1762s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 1762s Setting up r-cran-spatstat.linnet (3.1-5-1) ... 1762s Setting up r-cran-spatstat (3.0-8-1) ... 1762s Setting up libheif-plugin-aomdec:arm64 (1.19.5-1build1) ... 1762s Setting up libheif-plugin-libde265:arm64 (1.19.5-1build1) ... 1762s Setting up libheif1:arm64 (1.19.5-1build1) ... 1762s Setting up libgdal36:arm64 (3.10.1+dfsg-1build2) ... 1762s Setting up r-cran-sf (1.0-19+dfsg-1) ... 1762s Setting up r-cran-stars (0.6-7-1) ... 1762s Setting up r-cran-areal (0.1.8+dfsg-2) ... 1762s Setting up r-cran-lwgeom (0.2-14-1) ... 1762s Setting up r-cran-terra (1.8-10-1) ... 1762s Setting up r-cran-ncdfgeom (1.1.6+dfsg-1) ... 1762s Setting up r-cran-raster (3.6-31-1) ... 1762s Processing triggers for install-info (7.1.1-1) ... 1762s Processing triggers for libc-bin (2.40-4ubuntu1) ... 1762s Processing triggers for man-db (2.13.0-1) ... 1809s autopkgtest [19:31:19]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1809s autopkgtest [19:31:19]: test pkg-r-autopkgtest: [----------------------- 1809s Test: Try to load the R library stars 1809s 1809s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 1809s Copyright (C) 2024 The R Foundation for Statistical Computing 1809s Platform: aarch64-unknown-linux-gnu 1809s 1809s R is free software and comes with ABSOLUTELY NO WARRANTY. 1809s You are welcome to redistribute it under certain conditions. 1809s Type 'license()' or 'licence()' for distribution details. 1809s 1809s R is a collaborative project with many contributors. 1809s Type 'contributors()' for more information and 1809s 'citation()' on how to cite R or R packages in publications. 1809s 1809s Type 'demo()' for some demos, 'help()' for on-line help, or 1809s 'help.start()' for an HTML browser interface to help. 1809s Type 'q()' to quit R. 1809s 1809s > library('stars') 1809s Loading required package: abind 1809s Loading required package: sf 1810s Linking to GEOS 3.13.0, GDAL 3.10.1, PROJ 9.5.1; sf_use_s2() is TRUE 1810s > 1810s > 1810s Other tests are currently unsupported! 1810s They will be progressively added. 1810s autopkgtest [19:31:20]: test pkg-r-autopkgtest: -----------------------] 1811s autopkgtest [19:31:21]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1811s pkg-r-autopkgtest PASS 1811s autopkgtest [19:31:21]: @@@@@@@@@@@@@@@@@@@@ summary 1811s run-unit-test PASS 1811s pkg-r-autopkgtest PASS 1817s nova [W] Using flock in prodstack6-arm64 1817s Creating nova instance adt-plucky-arm64-r-cran-stars-20250203-190109-juju-7f2275-prod-proposed-migration-environment-15-84df6cbf-ef36-45b2-8bc4-657accaf4485 from image adt/ubuntu-plucky-arm64-server-20250203.img (UUID fb7ca42f-38bc-45ee-b928-9b9fb089de0d)... 1817s nova [W] Timed out waiting for eb9547c9-777d-41e6-85bb-241fc9e8092e to get deleted. 1817s nova [W] Using flock in prodstack6-arm64 1817s Creating nova instance adt-plucky-arm64-r-cran-stars-20250203-190109-juju-7f2275-prod-proposed-migration-environment-15-84df6cbf-ef36-45b2-8bc4-657accaf4485 from image adt/ubuntu-plucky-arm64-server-20250203.img (UUID fb7ca42f-38bc-45ee-b928-9b9fb089de0d)... 1817s nova [W] Timed out waiting for 11211209-bda7-448f-be63-c043eb86c2b2 to get deleted.