0s autopkgtest [15:57:55]: starting date and time: 2025-03-15 15:57:55+0000 0s autopkgtest [15:57:55]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:57:55]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.o20suxbx/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-spatstat.utils --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-28.secgroup --name adt-plucky-arm64-r-cran-spatstat.utils-20250315-155755-juju-7f2275-prod-proposed-migration-environment-20-dd6c3513-032f-4a7c-b19a-03d8a112e189 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 146s autopkgtest [16:00:21]: testbed dpkg architecture: arm64 147s autopkgtest [16:00:22]: testbed apt version: 2.9.33 147s autopkgtest [16:00:22]: @@@@@@@@@@@@@@@@@@@@ test bed setup 148s autopkgtest [16:00:22]: testbed release detected to be: None 149s autopkgtest [16:00:24]: updating testbed package index (apt update) 149s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 150s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 150s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 150s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 150s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 150s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 150s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 151s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 151s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1856 B] 151s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 151s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [324 kB] 151s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [14.7 kB] 151s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 151s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [268 B] 151s Fetched 1078 kB in 2s (569 kB/s) 152s Reading package lists... 153s Reading package lists... 153s Building dependency tree... 153s Reading state information... 154s Calculating upgrade... 154s Calculating upgrade... 155s The following packages will be upgraded: 155s pinentry-curses python3-jinja2 strace 155s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 155s Need to get 647 kB of archives. 155s After this operation, 11.3 kB of additional disk space will be used. 155s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 156s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-2ubuntu3 [39.2 kB] 156s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 156s Fetched 647 kB in 1s (564 kB/s) 157s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 157s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 157s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 157s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_arm64.deb ... 157s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 157s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 157s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 157s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 157s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 157s Setting up strace (6.13+ds-1ubuntu1) ... 157s Processing triggers for man-db (2.13.0-1) ... 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 159s Solving dependencies... 159s The following packages will be REMOVED: 159s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 159s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 159s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 159s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 159s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 159s After this operation, 267 MB disk space will be freed. 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 160s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 160s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 160s Removing libpython3.12t64:arm64 (3.12.9-1) ... 160s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 160s Removing libnsl2:arm64 (1.3.0-3build3) ... 160s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 160s Removing libunwind8:arm64 (1.6.2-3.1) ... 160s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 160s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 162s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 162s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 162s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 162s /etc/kernel/postrm.d/initramfs-tools: 162s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 163s /etc/kernel/postrm.d/zz-flash-kernel: 163s flash-kernel: Kernel 6.11.0-8-generic has been removed. 163s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 163s /etc/kernel/postrm.d/zz-update-grub: 163s Sourcing file `/etc/default/grub' 163s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 163s Generating grub configuration file ... 163s Found linux image: /boot/vmlinuz-6.14.0-10-generic 163s Found initrd image: /boot/initrd.img-6.14.0-10-generic 164s Warning: os-prober will not be executed to detect other bootable partitions. 164s Systems on them will not be added to the GRUB boot configuration. 164s Check GRUB_DISABLE_OS_PROBER documentation entry. 164s Adding boot menu entry for UEFI Firmware Settings ... 164s done 164s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 164s Processing triggers for libc-bin (2.41-1ubuntu1) ... 164s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 164s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 164s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 164s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 164s autopkgtest [16:00:39]: upgrading testbed (apt dist-upgrade and autopurge) 165s Reading package lists... 166s Building dependency tree... 166s Reading state information... 166s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 166s Starting 2 pkgProblemResolver with broken count: 0 166s Done 166s Entering ResolveByKeep 167s 167s Calculating upgrade... 167s The following packages will be upgraded: 167s libc-bin libc-dev-bin libc6 libc6-dev locales 168s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 168s Need to get 9530 kB of archives. 168s After this operation, 0 B of additional disk space will be used. 168s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 170s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 170s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 173s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 174s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 179s Preconfiguring packages ... 179s Fetched 9530 kB in 12s (829 kB/s) 179s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 180s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 180s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 180s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 180s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 180s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 180s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 180s Setting up libc6:arm64 (2.41-1ubuntu2) ... 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 181s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 181s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Setting up libc-bin (2.41-1ubuntu2) ... 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 181s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 181s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Setting up locales (2.41-1ubuntu2) ... 182s Generating locales (this might take a while)... 184s en_US.UTF-8... done 184s Generation complete. 184s Setting up libc-dev-bin (2.41-1ubuntu2) ... 184s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 184s Processing triggers for man-db (2.13.0-1) ... 185s Processing triggers for systemd (257.3-1ubuntu3) ... 187s Reading package lists... 187s Building dependency tree... 187s Reading state information... 187s Starting pkgProblemResolver with broken count: 0 188s Starting 2 pkgProblemResolver with broken count: 0 188s Done 188s Solving dependencies... 188s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 189s autopkgtest [16:01:04]: rebooting testbed after setup commands that affected boot 212s autopkgtest [16:01:27]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 215s autopkgtest [16:01:30]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-spatstat.utils 218s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-spatstat.utils 3.1-2-1 (dsc) [2192 B] 218s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-spatstat.utils 3.1-2-1 (tar) [102 kB] 218s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-spatstat.utils 3.1-2-1 (diff) [2668 B] 218s gpgv: Signature made Tue Jan 21 01:18:30 2025 UTC 218s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 218s gpgv: issuer "plessy@debian.org" 218s gpgv: Can't check signature: No public key 218s dpkg-source: warning: cannot verify inline signature for ./r-cran-spatstat.utils_3.1-2-1.dsc: no acceptable signature found 218s autopkgtest [16:01:33]: testing package r-cran-spatstat.utils version 3.1-2-1 219s autopkgtest [16:01:34]: build not needed 226s autopkgtest [16:01:41]: test generic: preparing testbed 226s Reading package lists... 226s Building dependency tree... 226s Reading state information... 226s Starting pkgProblemResolver with broken count: 0 227s Starting 2 pkgProblemResolver with broken count: 0 227s Done 227s The following NEW packages will be installed: 227s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 227s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1 227s libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 227s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 227s libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 227s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 227s libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-abind r-cran-deldir 227s r-cran-goftest r-cran-lattice r-cran-matrix r-cran-mgcv r-cran-nlme 227s r-cran-polyclip r-cran-rpart r-cran-spatstat.data r-cran-spatstat.explore 227s r-cran-spatstat.geom r-cran-spatstat.model r-cran-spatstat.random 227s r-cran-spatstat.sparse r-cran-spatstat.univar r-cran-spatstat.utils 227s r-cran-survival r-cran-tensor unzip x11-common xdg-utils zip 227s 0 upgraded, 63 newly installed, 0 to remove and 0 not upgraded. 227s Need to get 75.4 MB of archives. 227s After this operation, 126 MB of additional disk space will be used. 227s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 228s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 230s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 230s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 230s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 230s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 231s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 231s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 231s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 231s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 231s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 232s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 232s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 232s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 233s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 233s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 233s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 234s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 234s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 234s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 234s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 234s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 238s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 238s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 238s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 238s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB] 239s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB] 239s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB] 239s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 239s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 239s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 239s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 239s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 240s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 240s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 241s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 241s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 241s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 241s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 242s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 242s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 243s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 243s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 243s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 275s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 275s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 276s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-goftest arm64 1.2-3-1 [60.2 kB] 276s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 277s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB] 282s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.167-1 [2311 kB] 285s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 289s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-polyclip arm64 1.10-7-1 [113 kB] 289s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 298s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rpart arm64 4.1.24-1 [665 kB] 299s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.utils arm64 3.1-2-1 [381 kB] 299s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.data all 3.1-4-1 [4047 kB] 304s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.univar arm64 3.1-1-1build1 [308 kB] 304s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.geom arm64 3.3-5-1 [3929 kB] 309s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.random arm64 3.3-2-1 [1159 kB] 310s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tensor all 1.5-4 [15.7 kB] 310s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.sparse arm64 3.1-0-1 [218 kB] 310s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.explore arm64 3.3-4-1 [3272 kB] 314s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.model arm64 3.3-4-1 [3398 kB] 318s Preconfiguring packages ... 318s Fetched 75.4 MB in 1min 31s (834 kB/s) 318s Selecting previously unselected package fonts-dejavu-mono. 319s (Reading database ... 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Processing triggers for libc-bin (2.41-1ubuntu2) ... 328s autopkgtest [16:03:23]: test generic: [----------------------- 328s BEGIN TEST tests/circleseg.R 329s 329s R version 4.4.3 (2025-02-28) -- "Trophy Case" 329s Copyright (C) 2025 The R Foundation for Statistical Computing 329s Platform: aarch64-unknown-linux-gnu 329s 329s R is free software and comes with ABSOLUTELY NO WARRANTY. 329s You are welcome to redistribute it under certain conditions. 329s Type 'license()' or 'licence()' for distribution details. 329s 329s R is a collaborative project with many contributors. 329s Type 'contributors()' for more information and 329s 'citation()' on how to cite R or R packages in publications. 329s 329s Type 'demo()' for some demos, 'help()' for on-line help, or 329s 'help.start()' for an HTML browser interface to help. 329s Type 'q()' to quit R. 329s 329s > #' spatstat.utils/tests/circleseg.R 329s > 329s > require(spatstat.utils) 329s Loading required package: spatstat.utils 329s > 329s > #' tests of R/xycircle.R, src/circxseg.c 329s > 329s > x0 <- (0:4)/4 329s > y0 <- runif(5) 329s > x1 <- x0 + runif(5) 329s > y1 <- y0 + runif(5) 329s > 329s > xc <- runif(4) 329s > yc <- runif(4) 329s > rc <- runif(4) 329s > 329s > ansX <- xysegXcircle(xc, yc, rc[1:3], x0, y0, x1, y1) 329s > ansM <- xysegMcircle(xc, yc, matrix(rc, 4, 2), x0, y0, x1, y1) 329s > ansP <- xysegPcircle(xc, yc, rc, x0, y0, x1, y1) 329s > 329s BEGIN TEST tests/fmla.R 329s 329s R version 4.4.3 (2025-02-28) -- "Trophy Case" 329s Copyright (C) 2025 The R Foundation for Statistical Computing 329s Platform: aarch64-unknown-linux-gnu 329s 329s R is free software and comes with ABSOLUTELY NO WARRANTY. 329s You are welcome to redistribute it under certain conditions. 329s Type 'license()' or 'licence()' for distribution details. 329s 329s R is a collaborative project with many contributors. 329s Type 'contributors()' for more information and 329s 'citation()' on how to cite R or R packages in publications. 329s 329s Type 'demo()' for some demos, 'help()' for on-line help, or 329s 'help.start()' for an HTML browser interface to help. 329s Type 'q()' to quit R. 329s 329s > #' tests/fmla.R 329s > #' 329s > #' Manipulation of formulae 329s > 329s > require(spatstat.utils) 329s Loading required package: spatstat.utils 329s > 329s > #' code coverage of special cases 329s > identical.formulae(y ~ x, NULL) 329s [1] FALSE 329s > termsinformula(NULL) 329s character(0) 329s > offsetsinformula(y ~ x) 329s character(0) 329s > lhs.of.formula(~x) 329s NULL 329s > rhs.of.formula(y ~ x, tilde=FALSE) 329s x 329s > f <- ~x 329s > lhs.of.formula(f) <- quote(y) 329s > print(f) 329s y ~ x 329s > can.be.formula("y ~ x") 329s [1] TRUE 329s > 329s > 329s BEGIN TEST tests/indices.R 329s 329s R version 4.4.3 (2025-02-28) -- "Trophy Case" 329s Copyright (C) 2025 The R Foundation for Statistical Computing 329s Platform: aarch64-unknown-linux-gnu 329s 329s R is free software and comes with ABSOLUTELY NO WARRANTY. 329s You are welcome to redistribute it under certain conditions. 329s Type 'license()' or 'licence()' for distribution details. 329s 329s R is a collaborative project with many contributors. 329s Type 'contributors()' for more information and 329s 'citation()' on how to cite R or R packages in publications. 329s 329s Type 'demo()' for some demos, 'help()' for on-line help, or 329s 'help.start()' for an HTML browser interface to help. 329s Type 'q()' to quit R. 329s 329s > #' Header for spatstat.utils/tests/*R 329s > #' 329s > 329s > require(spatstat.utils) 329s Loading required package: spatstat.utils 329s > ALWAYS <- FULLTEST <- TRUE 329s > #' indices.R 329s > #' Tests of code for understanding index vectors etc 329s > #' $Revision: 1.3 $ $Date: 2020/05/11 01:25:34 $ 329s > 329s > if(FULLTEST) { 329s + local({ 329s + 329s + a <- grokIndexVector(c(FALSE,TRUE), 10) 329s + b <- grokIndexVector(rep(c(FALSE,TRUE), 7), 10) 329s + d <- grokIndexVector(c(2,12), 10) 329s + e <- grokIndexVector(letters[4:2], nama=letters) 329s + f <- grokIndexVector(letters[10:1], nama=letters[1:5]) 329s + g <- grokIndexVector(-c(2, 5), 10) 329s + h <- grokIndexVector(-c(2, 5, 15), 10) 329s + 329s + Nam <- letters[1:10] 329s + j <- positiveIndex(-c(2,5), nama=Nam) 329s + jj <- logicalIndex(-c(2,5), nama=Nam) 329s + k <- positiveIndex(-c(2,5), nama=Nam) 329s + kk <- logicalIndex(-c(2,5), nama=Nam) 329s + mm <- positiveIndex(c(FALSE,TRUE), nama=Nam) 329s + nn <- positiveIndex(FALSE, nama=Nam) 329s + }) 329s + } 329s > 329s > 329s BEGIN TEST tests/numerical.R 329s 329s R version 4.4.3 (2025-02-28) -- "Trophy Case" 329s Copyright (C) 2025 The R Foundation for Statistical Computing 329s Platform: aarch64-unknown-linux-gnu 329s 329s R is free software and comes with ABSOLUTELY NO WARRANTY. 329s You are welcome to redistribute it under certain conditions. 329s Type 'license()' or 'licence()' for distribution details. 329s 329s R is a collaborative project with many contributors. 329s Type 'contributors()' for more information and 329s 'citation()' on how to cite R or R packages in publications. 329s 329s Type 'demo()' for some demos, 'help()' for on-line help, or 329s 'help.start()' for an HTML browser interface to help. 329s Type 'q()' to quit R. 329s 329s > #' spatstat.utils/tests/numerical.R 329s > #' Tests of numerical code 329s > 329s > require(spatstat.utils) 329s Loading required package: spatstat.utils 329s > 329s > #' validity of orderstats, orderwhich 329s > x <- unique(runif(100)) 329s > if(!all(orderstats(x, 2:5) == sort(x)[2:5])) 329s + stop("Incorrect result from orderstats()") 329s > if(!all(orderwhich(x, 2:5) == order(x)[2:5])) 329s + stop("Incorrect result from orderwhich()") 329s > if(!all(orderstats(x, 2:5, decreasing=TRUE) == sort(x, decreasing=TRUE)[2:5])) 329s + stop("Incorrect result from orderstats(decreasing=TRUE)") 329s > if(!all(orderwhich(x, 2:5, decreasing=TRUE) == order(x, decreasing=TRUE)[2:5])) 329s + stop("Incorrect result from orderwhich(decreasing=TRUE)") 329s > y <- fave.order(x) 329s > 329s > #' must handle NA's without exiting 329s > x[c(4, 7, 42)] <- NA 329s > aa <- orderstats(x, 2:5) 329s > aa <- orderstats(x, 2:5, decreasing=TRUE) 329s > bb <- orderwhich(x, 2:5) 329s > bb <- orderwhich(x, 2:5, decreasing=TRUE) 329s > x[] <- NA 329s > uu <- orderstats(x, 2:5) 329s > uu <- orderstats(x, 2:5, decreasing=TRUE) 329s > vv <- orderwhich(x, 2:5) 329s > vv <- orderwhich(x, 2:5, decreasing=TRUE) 329s > 329s > #' validity of 'tapplysum' 329s > aa <- factor(letters[1:3]) 329s > bb <- factor(letters[1:4])[c(1,2,2)] 329s > xx <- round(runif(3), 3) 329s > yy <- tapplysum(xx, list(A=aa, B=bb), do.names=TRUE) 329s > zz <- tapply(xx, list(A=aa, B=bb), sum) 329s > zz[is.na(zz)] <- 0 329s > if(any(yy != zz)) 329s + stop("tapplysum does not agree with tapply(, sum)") 329s > #' tapplysum with zero-length data 329s > tapplysum(xx[FALSE], list(A=aa[FALSE], B=bb[FALSE]), do.names=TRUE) 329s B 329s A a b c d 329s a 0 0 0 0 329s b 0 0 0 0 329s c 0 0 0 0 329s > #' tapplysum with NA values in x 329s > xx <- runif(12) 329s > aa <- rep(aa, 4) 329s > bb <- rep(bb, 4) 329s > ee <- sample(aa) 329s > ff <- sample(bb) 329s > xx[2] <- NA 329s > uu1 <- tapplysum(xx, list(aa), do.names=TRUE) 329s > uu2 <- tapplysum(xx, list(aa, bb), do.names=TRUE) 329s > uu3 <- tapplysum(xx, list(aa, bb, ee), do.names=TRUE) 329s > uu4 <- tapplysum(xx, list(aa, bb, ee, ff), do.names=TRUE) 329s > 329s > #' validity of matchIntegerDataFrames 329s > #' 3 columns 329s > A <- data.frame(a=sample(1:5), b=sample(1:5, replace=TRUE), c=3) 329s > B <- data.frame(u=sample(1:3), w=3:1, v=1) 329s > A[4,] <- B[2,] 329s > a3code <- paste(A[,1], A[,2], A[,3]) 329s > b3code <- paste(B[,1], B[,2], B[,3]) 329s > stopifnot(identical(matchIntegerDataFrames(A,B,TRUE), match(a3code,b3code))) 329s > stopifnot(identical(matchIntegerDataFrames(A,B,FALSE), match(a3code,b3code))) 329s > #' 2 columns 329s > A <- A[,1:2] 329s > B <- B[,1:2] 329s > a2code <- paste(A[,1], A[,2]) 329s > b2code <- paste(B[,1], B[,2]) 329s > stopifnot(identical(matchIntegerDataFrames(A,B,TRUE), match(a2code,b2code))) 329s > stopifnot(identical(matchIntegerDataFrames(A,B,FALSE), match(a2code,b2code))) 329s > #' 1 column 329s > A <- A[,1, drop=FALSE] 329s > B <- B[,1, drop=FALSE] 329s > a1code <- paste(A[,1]) 329s > b1code <- paste(B[,1]) 329s > stopifnot(identical(matchIntegerDataFrames(A,B,TRUE), match(a1code,b1code))) 329s > stopifnot(identical(matchIntegerDataFrames(A,B,FALSE), match(a1code,b1code))) 329s > 329s > #' code in utilseq.R 329s > 329s > dropifsingle(list(42)) 329s [1] 42 329s > dropifsingle(1:2) 329s [1] 1 2 329s > 329s > revcumsum(1:5 * (1 + 2i)) 329s [1] 15+30i 14+28i 12+24i 9+18i 5+10i 329s > 329s > as2vector(3:4) 329s [1] 3 4 329s > as2vector(list(x=1, y=1)) 329s [1] 1 1 329s > ensure2vector(3:4) 329s [1] 3 4 329s > ensure2vector(3) 329s [1] 3 3 329s > 329s > prolongseq(2:5, newrange=c(1,9)) 329s [1] 1 2 3 4 5 6 7 8 9 329s attr(,"nleft") 329s [1] 1 329s attr(,"nright") 329s [1] 4 329s > 329s > fillseq(c(1:3, 5:7, 9)) 329s $xnew 329s [1] 1 2 3 4 5 6 7 8 9 329s 329s $i 329s [1] 1 2 3 5 6 7 9 329s 329s > 329s > geomseq(0.5, 2, 10) 329s [1] 0.5000000 0.5832645 0.6803950 0.7937005 0.9258747 1.0800597 1.2599210 329s [8] 1.4697345 1.7144880 2.0000000 329s > 329s > check.in.range(4, c(1,10)) 329s [1] TRUE 329s > 329s > startinrange(runif(1), 1, c(3, 7)) 329s [1] 5.128816 329s > 329s > prettyinside(runif(10,max=5)) 329s [1] 1 2 3 4 329s > 329s > prettydiscrete(letters) 329s [1] "a" "c" "e" "g" "i" "k" "m" "o" "q" "s" 329s > 329s > evenly.spaced(seq(0, 1, length.out=7)) 329s [1] TRUE 329s > 329s > equispaced(seq(0, 1, length.out=7)) 329s [1] TRUE 329s > 329s > adjustthinrange(c(0.0000001, 0.999999), 1, c(0,1)) 329s [1] 0 1 329s > 329s > fastFindInterval(runif(100), seq(0,1,length.out=8), labels=TRUE, dig.lab=2) 329s [1] [0,0.14) [0.86,1] [0.57,0.71) [0.57,0.71) [0.43,0.57) [0.43,0.57) 329s [7] [0.43,0.57) [0.57,0.71) [0.71,0.86) [0.71,0.86) [0,0.14) [0.14,0.29) 329s [13] [0.43,0.57) [0.57,0.71) [0.43,0.57) [0.71,0.86) [0.29,0.43) [0.86,1] 329s [19] [0.29,0.43) [0.86,1] [0.86,1] [0.14,0.29) [0.86,1] [0.71,0.86) 329s [25] [0.71,0.86) [0.14,0.29) [0,0.14) [0.14,0.29) [0.86,1] [0.71,0.86) 329s [31] [0.29,0.43) [0.43,0.57) [0.86,1] [0.43,0.57) [0.71,0.86) [0.57,0.71) 329s [37] [0.86,1] [0.29,0.43) [0.29,0.43) [0.43,0.57) [0.71,0.86) [0.86,1] 329s [43] [0.29,0.43) [0,0.14) [0.14,0.29) [0,0.14) [0,0.14) [0,0.14) 329s [49] [0,0.14) [0.14,0.29) [0.43,0.57) [0.29,0.43) [0.71,0.86) [0.29,0.43) 329s [55] [0.71,0.86) [0.71,0.86) [0,0.14) [0.71,0.86) [0.86,1] [0,0.14) 329s [61] [0.57,0.71) [0.29,0.43) [0.57,0.71) [0.29,0.43) [0.71,0.86) [0.29,0.43) 329s [67] [0.57,0.71) [0.14,0.29) [0.71,0.86) [0,0.14) [0.29,0.43) [0.86,1] 329s [73] [0,0.14) [0.71,0.86) [0.71,0.86) [0,0.14) [0.57,0.71) [0.43,0.57) 329s [79] [0.57,0.71) [0.43,0.57) [0.57,0.71) [0.43,0.57) [0.86,1] [0.43,0.57) 329s [85] [0.43,0.57) [0.14,0.29) [0,0.14) [0,0.14) [0,0.14) [0.71,0.86) 329s [91] [0.14,0.29) [0.86,1] [0.86,1] [0.43,0.57) [0.57,0.71) [0.43,0.57) 329s [97] [0,0.14) [0.71,0.86) [0.71,0.86) [0.14,0.29) 329s 7 Levels: [0,0.14) [0.14,0.29) [0.29,0.43) [0.43,0.57) ... [0.86,1] 329s > 329s > ifelseAB(pi > c(3, 3.5, 4), "less", "more") 329s [1] "less" "more" "more" 329s > ifelseXB(pi > c(3, 3.5, 4), rep("less", 3), "more") 329s [1] "less" "more" "more" 329s > ifelseXY(pi > c(3, 3.5, 4), rep("less", 3), rep("more",3)) 329s [1] "less" "more" "more" 329s > ifelse1NA(pi > c(3, 3.5, 4)) 329s [1] 1 NA NA 329s > ifelse0NA(pi > c(3, 3.5, 4)) 329s [1] 0 NA NA 329s > ifelseNegPos(pi > c(3, 3.5, 4), 1:3) 329s [1] -1 2 3 329s > 329s > ratiotweak(c(1,1,0,0), c(1,0,1,0), 42, 24) 329s [1] 1 42 0 24 329s > natozero(c(1,1,0,0)/c(1,0,1,0)) 329s [1] 1 Inf 0 0 329s > 329s > insertinlist(letters[1:5], 4, rep("hoppity", 3)) 329s [1] "a" "b" "c" "hoppity" "hoppity" "hoppity" "e" 329s > 329s > dround(pi) 329s [1] 3.141593 329s > niceround(pi) 329s [1] 2 329s > 329s > ## prime numbers 329s > 329s > ## code coverage of special cases 329s > 329s > eratosthenes(20) 329s [1] 2 3 5 7 11 13 17 19 329s > 329s > primefactors(8209 * 3) 329s [1] 3 8209 329s > 329s > stopifnot(identical(primefactors(42), 329s + primefactors(42, "interpreted"))) 329s > 329s > stopifnot(is.prime(399137)) 329s > 329s BEGIN TEST tests/segments.R 329s Warning message: 329s In equispaced(seq(0, 1, length.out = 7)) : 'equispaced' is deprecated. 329s Use 'evenly.spaced' instead. 329s See help("Deprecated") 329s 329s R version 4.4.3 (2025-02-28) -- "Trophy Case" 329s Copyright (C) 2025 The R Foundation for Statistical Computing 329s Platform: aarch64-unknown-linux-gnu 329s 329s R is free software and comes with ABSOLUTELY NO WARRANTY. 329s You are welcome to redistribute it under certain conditions. 329s Type 'license()' or 'licence()' for distribution details. 329s 329s R is a collaborative project with many contributors. 329s Type 'contributors()' for more information and 329s 'citation()' on how to cite R or R packages in publications. 329s 329s Type 'demo()' for some demos, 'help()' for on-line help, or 329s 'help.start()' for an HTML browser interface to help. 329s Type 'q()' to quit R. 329s 329s > #' spatstat.utils/tests/segments.R 329s > 329s > require(spatstat.utils) 329s Loading required package: spatstat.utils 329s > 329s > #' test of distppll pointed out by Ang Qi Wei 329s > 329s > p <- matrix(c(1.5, 0), 1, 2) 329s > l <- matrix(c(0,0,1,0,1,0,2,0), 2, 4, byrow=T) 329s > a <- distppll(p, l, mintype=2, method="interpreted") 329s > d <- distppll(p, l, mintype=2, method="C") 329s > if(a$min.which != d$min.which) 329s + stop("conflict between C and interpreted code in distppll") 329s > 329s > #' check consistency between different C routines 329s > b <- distppllmin(p, l) 329s > if(a$min.which != b$min.which) 329s + stop("conflict between distppll and distppllmin") 329s > 329s BEGIN TEST tests/tekst.R 330s 330s R version 4.4.3 (2025-02-28) -- "Trophy Case" 330s Copyright (C) 2025 The R Foundation for Statistical Computing 330s Platform: aarch64-unknown-linux-gnu 330s 330s R is free software and comes with ABSOLUTELY NO WARRANTY. 330s You are welcome to redistribute it under certain conditions. 330s Type 'license()' or 'licence()' for distribution details. 330s 330s R is a collaborative project with many contributors. 330s Type 'contributors()' for more information and 330s 'citation()' on how to cite R or R packages in publications. 330s 330s Type 'demo()' for some demos, 'help()' for on-line help, or 330s 'help.start()' for an HTML browser interface to help. 330s Type 'q()' to quit R. 330s 330s > #' spatstat.utils/tests/tekst.R 330s > 330s > require(spatstat.utils) 330s Loading required package: spatstat.utils 330s > 330s > #' tests of R/utiltext.R 330s > 330s > a <- paren(character(0)) 330s > a <- paren("hello", "") 330s > a <- paren("hello", "{") 330s > 330s > strsplitretain("hello, world") 330s [[1]] 330s [1] "hello," " world" 330s 330s > 330s > truncline(c("Now is the time for all good people", 330s + "to come to the aid of the Party"), 330s + 15) 330s [1] "Now is the [..]" "to come to [..]" 330s > 330s > is.blank(c("a", " ", "b")) 330s [1] FALSE TRUE FALSE 330s > 330s > onetwo <- c("one", "two") 330s > padtowidth(onetwo, 10, "left") 330s [1] "one " "two " 330s > padtowidth(onetwo, 10, "right") 330s [1] " one" " two" 330s > padtowidth(onetwo, 10, "centre") 330s [1] " one " " two " 330s > 330s > splat("Hello world", indent="zzz") 330s zzzHello world 330s > 330s > choptext("Hello\nWorld") 330s [1] "Hello" "World" 330s > exhibitStringList("Letters", letters) 330s Letters 330s a b c d e f g h i j k l m n o p q r s t u v w x y z 330s > exhibitStringList("Letters", letters[1:4]) 330s Letters a, b, c, d 330s > 330s > numalign(42, 1e4) 330s [1] "00042" 330s > singlestring(1:5) 330s [1] "12345" 330s > 330s > x <- c("TRUE", "unknown", "not known") 330s > verbalogic(x, "and") 330s [1] "unknown and not known" 330s > verbalogic(x, "or") 330s [1] "TRUE" 330s > verbalogic(x, "not") 330s [1] "FALSE" "not { unknown }" "not { not known }" 330s > x[1] <- "FALSE" 330s > verbalogic(x, "and") 330s [1] "FALSE" 330s > 330s > sensiblevarname("$@wtf%!", "variablenumberone") 330s [1] "variablenumb" 330s > nzpaste(c("Hello", "", "World")) 330s [1] "Hello" "" "World" 330s > substringcount("v", "vavavoom") 330s [1] 3 330s > huh <- c("42", "y <- x", "$%^%$") 330s > is.parseable(huh) 330s 42 y <- x $%^%$ 330s TRUE TRUE FALSE 330s > make.parseable(huh) 330s [1] "X42" "y....x" "X....." 330s > paste.expr(expression(y == x)) 330s [1] "y == x" 330s > pasteFormula(y ~ x + z) 330s [1] "y ~ x + z" 330s > gsubdot("cbind(est,theo)", ". ~ r") 330s [1] "cbind(est,theo) ~ r" 330s > 330s > simplenumber(0) 330s [1] "0" 330s > simplenumber(1/3) 330s [1] "1/3" 330s > simplenumber(2/3) 330s [1] "2/3" 330s > simplenumber(-2) 330s [1] "-2" 330s > simplenumber(0, unit="km") 330s [1] "0" 330s > simplenumber(1/3, unit="km") 330s [1] "km/3" 330s > simplenumber(2/3, unit="km") 330s [1] "2*km/3" 330s > simplenumber(-2, unit="km") 330s [1] "-2*km" 330s > 330s > makeCutLabels(0:3) 330s [1] "(0,1]" "(1,2]" "(2,3]" 330s > 330s autopkgtest [16:03:25]: test generic: -----------------------] 330s generic PASS 330s autopkgtest [16:03:25]: test generic: - - - - - - - - - - results - - - - - - - - - - 331s autopkgtest [16:03:26]: test pkg-r-autopkgtest: preparing testbed 545s autopkgtest [16:07:00]: testbed dpkg architecture: arm64 545s autopkgtest [16:07:00]: testbed apt version: 2.9.33 546s autopkgtest [16:07:01]: @@@@@@@@@@@@@@@@@@@@ test bed setup 546s autopkgtest [16:07:01]: testbed release detected to be: plucky 547s autopkgtest [16:07:02]: updating testbed package index (apt update) 547s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 548s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 548s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 548s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 548s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 548s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 548s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 548s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 549s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1856 B] 549s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 549s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [324 kB] 549s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [14.7 kB] 549s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 549s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [268 B] 549s Fetched 1078 kB in 2s (577 kB/s) 551s Reading package lists... 552s Reading package lists... 552s Building dependency tree... 552s Reading state information... 553s Calculating upgrade... 553s Calculating upgrade... 553s The following packages will be upgraded: 553s pinentry-curses python3-jinja2 strace 553s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 553s Need to get 647 kB of archives. 553s After this operation, 11.3 kB of additional disk space will be used. 553s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 554s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-2ubuntu3 [39.2 kB] 554s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 555s Fetched 647 kB in 1s (606 kB/s) 555s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 555s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 555s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 555s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_arm64.deb ... 555s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 555s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 555s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 555s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 555s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 556s Setting up strace (6.13+ds-1ubuntu1) ... 556s Processing triggers for man-db (2.13.0-1) ... 557s Reading package lists... 557s Building dependency tree... 557s Reading state information... 557s Solving dependencies... 558s The following packages will be REMOVED: 558s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 558s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 558s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 558s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 558s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 558s After this operation, 267 MB disk space will be freed. 558s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 558s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 558s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 558s Removing libpython3.12t64:arm64 (3.12.9-1) ... 558s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 558s Removing libnsl2:arm64 (1.3.0-3build3) ... 558s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 559s Removing libunwind8:arm64 (1.6.2-3.1) ... 559s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 559s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 561s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 561s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 561s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 561s /etc/kernel/postrm.d/initramfs-tools: 561s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 561s /etc/kernel/postrm.d/zz-flash-kernel: 561s flash-kernel: Kernel 6.11.0-8-generic has been removed. 561s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 562s /etc/kernel/postrm.d/zz-update-grub: 562s Sourcing file `/etc/default/grub' 562s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 562s Generating grub configuration file ... 562s Found linux image: /boot/vmlinuz-6.14.0-10-generic 562s Found initrd image: /boot/initrd.img-6.14.0-10-generic 563s Warning: os-prober will not be executed to detect other bootable partitions. 563s Systems on them will not be added to the GRUB boot configuration. 563s Check GRUB_DISABLE_OS_PROBER documentation entry. 563s Adding boot menu entry for UEFI Firmware Settings ... 563s done 563s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 563s Processing triggers for libc-bin (2.41-1ubuntu1) ... 563s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 563s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 563s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 563s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 564s autopkgtest [16:07:19]: upgrading testbed (apt dist-upgrade and autopurge) 564s Reading package lists... 564s Building dependency tree... 564s Reading state information... 565s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 565s Starting 2 pkgProblemResolver with broken count: 0 565s Done 566s Entering ResolveByKeep 567s 567s Calculating upgrade... 567s The following packages will be upgraded: 567s libc-bin libc-dev-bin libc6 libc6-dev locales 568s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 568s Need to get 9530 kB of archives. 568s After this operation, 0 B of additional disk space will be used. 568s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 570s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 570s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 573s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 574s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 580s Preconfiguring packages ... 580s Fetched 9530 kB in 12s (801 kB/s) 580s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 580s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 580s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 580s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 580s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 580s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 580s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 580s Setting up libc6:arm64 (2.41-1ubuntu2) ... 581s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 581s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 581s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 581s Setting up libc-bin (2.41-1ubuntu2) ... 581s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 581s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 581s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 581s Setting up locales (2.41-1ubuntu2) ... 582s Generating locales (this might take a while)... 584s en_US.UTF-8... done 584s Generation complete. 584s Setting up libc-dev-bin (2.41-1ubuntu2) ... 584s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 584s Processing triggers for man-db (2.13.0-1) ... 585s Processing triggers for systemd (257.3-1ubuntu3) ... 586s Reading package lists... 586s Building dependency tree... 586s Reading state information... 586s Starting pkgProblemResolver with broken count: 0 586s Starting 2 pkgProblemResolver with broken count: 0 586s Done 587s Solving dependencies... 587s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 587s autopkgtest [16:07:42]: rebooting testbed after setup commands that affected boot 614s Reading package lists... 614s Building dependency tree... 614s Reading state information... 615s Starting pkgProblemResolver with broken count: 0 615s Starting 2 pkgProblemResolver with broken count: 0 615s Done 616s The following NEW packages will be installed: 616s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 616s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 616s g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 616s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 616s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 616s libasan8 libblas-dev libblas3 libbz2-dev libcairo2 libcc1-0 libdatrie1 616s libdeflate-dev libdeflate0 libfontconfig1 libgcc-14-dev libgfortran-14-dev 616s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 616s libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 616s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblerc4 616s liblsan0 liblzma-dev libmpc3 libncurses-dev libpango-1.0-0 616s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 616s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 616s libpng-dev libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libtcl8.6 616s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 616s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 616s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 616s r-cran-spatstat.utils unzip x11-common xdg-utils zip zlib1g-dev 616s 0 upgraded, 99 newly installed, 0 to remove and 0 not upgraded. 616s Need to get 131 MB of archives. 616s After this operation, 414 MB of additional disk space will be used. 616s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 617s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 617s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB] 630s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B] 630s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 630s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 630s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB] 630s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 630s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB] 630s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB] 634s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB] 635s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB] 639s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB] 640s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB] 642s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB] 645s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB] 669s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB] 669s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 669s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 669s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB] 672s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB] 686s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB] 686s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 686s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 686s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 686s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 687s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 687s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 688s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 688s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 689s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 689s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 689s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB] 690s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB] 704s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB] 704s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 704s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 704s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 704s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 704s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 704s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 704s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 705s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 705s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 705s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 705s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 705s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 706s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 706s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 706s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 706s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 706s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 706s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 706s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 722s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 722s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 722s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 722s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 722s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 722s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 725s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 731s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 731s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 732s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 732s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 732s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB] 732s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB] 732s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB] 732s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 732s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 732s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 733s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 733s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 733s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 734s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 734s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 735s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB] 735s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 735s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 735s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 735s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 737s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 737s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 737s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 737s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 737s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 737s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 738s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 739s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 739s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 739s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 739s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 775s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB] 775s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 775s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 775s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 775s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B] 775s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 775s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.utils arm64 3.1-2-1 [381 kB] 776s Preconfiguring packages ... 776s Fetched 131 MB in 2min 40s (821 kB/s) 776s Selecting previously unselected package libisl23:arm64. 776s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 776s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ... 776s Unpacking libisl23:arm64 (0.27-1) ... 776s Selecting previously unselected package libmpc3:arm64. 777s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ... 777s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 777s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 777s Preparing to unpack .../02-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 777s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 777s Selecting previously unselected package cpp-14. 777s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_arm64.deb ... 777s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 777s Selecting previously unselected package cpp-aarch64-linux-gnu. 777s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 777s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 777s Selecting previously unselected package cpp. 777s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 777s Unpacking cpp (4:14.2.0-1ubuntu1) ... 777s Selecting previously unselected package libcc1-0:arm64. 777s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_arm64.deb ... 777s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ... 777s Selecting previously unselected package libgomp1:arm64. 777s Preparing to unpack .../07-libgomp1_15-20250222-0ubuntu1_arm64.deb ... 777s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ... 777s Selecting previously unselected package libitm1:arm64. 777s Preparing to unpack .../08-libitm1_15-20250222-0ubuntu1_arm64.deb ... 777s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ... 777s Selecting previously unselected package libasan8:arm64. 777s Preparing to unpack .../09-libasan8_15-20250222-0ubuntu1_arm64.deb ... 777s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ... 777s Selecting previously unselected package liblsan0:arm64. 777s Preparing to unpack .../10-liblsan0_15-20250222-0ubuntu1_arm64.deb ... 777s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ... 777s Selecting previously unselected package libtsan2:arm64. 777s Preparing to unpack .../11-libtsan2_15-20250222-0ubuntu1_arm64.deb ... 777s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ... 777s Selecting previously unselected package libubsan1:arm64. 777s Preparing to unpack .../12-libubsan1_15-20250222-0ubuntu1_arm64.deb ... 777s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ... 777s Selecting previously unselected package libhwasan0:arm64. 777s Preparing to unpack .../13-libhwasan0_15-20250222-0ubuntu1_arm64.deb ... 777s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ... 778s Selecting previously unselected package libgcc-14-dev:arm64. 778s Preparing to unpack .../14-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ... 778s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 778s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 778s Preparing to unpack .../15-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 778s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 778s Selecting previously unselected package gcc-14. 778s Preparing to unpack .../16-gcc-14_14.2.0-17ubuntu3_arm64.deb ... 778s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 778s Selecting previously unselected package gcc-aarch64-linux-gnu. 778s Preparing to unpack .../17-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 778s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 778s Selecting previously unselected package gcc. 778s Preparing to unpack .../18-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ... 778s Unpacking gcc (4:14.2.0-1ubuntu1) ... 778s Selecting previously unselected package libstdc++-14-dev:arm64. 778s Preparing to unpack .../19-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ... 778s Unpacking libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 778s Selecting previously unselected package g++-14-aarch64-linux-gnu. 779s Preparing to unpack .../20-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 779s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 779s Selecting previously unselected package g++-14. 779s Preparing to unpack .../21-g++-14_14.2.0-17ubuntu3_arm64.deb ... 779s Unpacking g++-14 (14.2.0-17ubuntu3) ... 779s Selecting previously unselected package g++-aarch64-linux-gnu. 779s Preparing to unpack .../22-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 779s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 779s Selecting previously unselected package g++. 779s Preparing to unpack .../23-g++_4%3a14.2.0-1ubuntu1_arm64.deb ... 779s Unpacking g++ (4:14.2.0-1ubuntu1) ... 779s Selecting previously unselected package build-essential. 779s Preparing to unpack .../24-build-essential_12.10ubuntu1_arm64.deb ... 779s Unpacking build-essential (12.10ubuntu1) ... 779s Selecting previously unselected package dctrl-tools. 779s Preparing to unpack .../25-dctrl-tools_2.24-3build3_arm64.deb ... 779s Unpacking dctrl-tools (2.24-3build3) ... 779s Selecting previously unselected package fonts-dejavu-mono. 779s Preparing to unpack .../26-fonts-dejavu-mono_2.37-8_all.deb ... 779s Unpacking fonts-dejavu-mono (2.37-8) ... 779s Selecting previously unselected package fonts-dejavu-core. 779s Preparing to unpack .../27-fonts-dejavu-core_2.37-8_all.deb ... 779s Unpacking fonts-dejavu-core (2.37-8) ... 779s Selecting previously unselected package fontconfig-config. 779s Preparing to unpack .../28-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ... 779s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 779s Selecting previously unselected package libfontconfig1:arm64. 780s Preparing to unpack .../29-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ... 780s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 780s Selecting previously unselected package fontconfig. 780s Preparing to unpack .../30-fontconfig_2.15.0-2ubuntu1_arm64.deb ... 780s Unpacking fontconfig (2.15.0-2ubuntu1) ... 780s Selecting previously unselected package libgfortran5:arm64. 780s Preparing to unpack .../31-libgfortran5_15-20250222-0ubuntu1_arm64.deb ... 780s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ... 780s Selecting previously unselected package libgfortran-14-dev:arm64. 780s Preparing to unpack .../32-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ... 780s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 780s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 780s Preparing to unpack .../33-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 780s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 780s Selecting previously unselected package gfortran-14. 780s Preparing to unpack .../34-gfortran-14_14.2.0-17ubuntu3_arm64.deb ... 780s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 780s Selecting previously unselected package gfortran-aarch64-linux-gnu. 780s Preparing to unpack .../35-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 780s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 780s Selecting previously unselected package gfortran. 780s Preparing to unpack .../36-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ... 780s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 780s Selecting previously unselected package icu-devtools. 780s Preparing to unpack .../37-icu-devtools_76.1-1ubuntu2_arm64.deb ... 780s Unpacking icu-devtools (76.1-1ubuntu2) ... 780s Selecting previously unselected package libblas3:arm64. 780s Preparing to unpack .../38-libblas3_3.12.1-2_arm64.deb ... 780s Unpacking libblas3:arm64 (3.12.1-2) ... 780s Selecting previously unselected package libblas-dev:arm64. 780s Preparing to unpack .../39-libblas-dev_3.12.1-2_arm64.deb ... 780s Unpacking libblas-dev:arm64 (3.12.1-2) ... 780s Selecting previously unselected package libbz2-dev:arm64. 780s Preparing to unpack .../40-libbz2-dev_1.0.8-6_arm64.deb ... 780s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 780s Selecting previously unselected package libpixman-1-0:arm64. 780s Preparing to unpack .../41-libpixman-1-0_0.44.0-3_arm64.deb ... 780s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 780s Selecting previously unselected package libxcb-render0:arm64. 780s Preparing to unpack .../42-libxcb-render0_1.17.0-2_arm64.deb ... 780s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 780s Selecting previously unselected package libxcb-shm0:arm64. 780s Preparing to unpack .../43-libxcb-shm0_1.17.0-2_arm64.deb ... 780s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 781s Selecting previously unselected package libxrender1:arm64. 781s Preparing to unpack .../44-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 781s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 781s Selecting previously unselected package libcairo2:arm64. 781s Preparing to unpack .../45-libcairo2_1.18.2-2_arm64.deb ... 781s Unpacking libcairo2:arm64 (1.18.2-2) ... 781s Selecting previously unselected package libdatrie1:arm64. 781s Preparing to unpack .../46-libdatrie1_0.2.13-3build1_arm64.deb ... 781s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 781s Selecting previously unselected package libdeflate0:arm64. 781s Preparing to unpack .../47-libdeflate0_1.23-1_arm64.deb ... 781s Unpacking libdeflate0:arm64 (1.23-1) ... 781s Selecting previously unselected package libdeflate-dev:arm64. 781s Preparing to unpack .../48-libdeflate-dev_1.23-1_arm64.deb ... 781s Unpacking libdeflate-dev:arm64 (1.23-1) ... 781s Selecting previously unselected package libgraphite2-3:arm64. 781s Preparing to unpack .../49-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 781s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 781s Selecting previously unselected package libharfbuzz0b:arm64. 781s Preparing to unpack .../50-libharfbuzz0b_10.2.0-1_arm64.deb ... 781s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 781s Selecting previously unselected package x11-common. 781s Preparing to unpack .../51-x11-common_1%3a7.7+23ubuntu3_all.deb ... 781s Unpacking x11-common (1:7.7+23ubuntu3) ... 781s Selecting previously unselected package libice6:arm64. 781s Preparing to unpack .../52-libice6_2%3a1.1.1-1_arm64.deb ... 781s Unpacking libice6:arm64 (2:1.1.1-1) ... 781s Selecting previously unselected package libicu-dev:arm64. 781s Preparing to unpack .../53-libicu-dev_76.1-1ubuntu2_arm64.deb ... 781s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 781s Selecting previously unselected package libjpeg-turbo8:arm64. 781s Preparing to unpack .../54-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 781s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 781s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 781s Preparing to unpack .../55-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 781s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 781s Selecting previously unselected package libjpeg8:arm64. 782s Preparing to unpack .../56-libjpeg8_8c-2ubuntu11_arm64.deb ... 782s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 782s Selecting previously unselected package libjpeg8-dev:arm64. 782s Preparing to unpack .../57-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 782s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 782s Selecting previously unselected package libjpeg-dev:arm64. 782s Preparing to unpack .../58-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 782s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 782s Selecting previously unselected package liblapack3:arm64. 782s Preparing to unpack .../59-liblapack3_3.12.1-2_arm64.deb ... 782s Unpacking liblapack3:arm64 (3.12.1-2) ... 782s Selecting previously unselected package liblapack-dev:arm64. 782s Preparing to unpack .../60-liblapack-dev_3.12.1-2_arm64.deb ... 782s Unpacking liblapack-dev:arm64 (3.12.1-2) ... 782s Selecting previously unselected package liblerc4:arm64. 782s Preparing to unpack .../61-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 782s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 782s Selecting previously unselected package libncurses-dev:arm64. 782s Preparing to unpack .../62-libncurses-dev_6.5+20250216-2_arm64.deb ... 782s Unpacking libncurses-dev:arm64 (6.5+20250216-2) ... 782s Selecting previously unselected package libthai-data. 782s Preparing to unpack .../63-libthai-data_0.1.29-2build1_all.deb ... 782s Unpacking libthai-data (0.1.29-2build1) ... 782s Selecting previously unselected package libthai0:arm64. 782s Preparing to unpack .../64-libthai0_0.1.29-2build1_arm64.deb ... 782s Unpacking libthai0:arm64 (0.1.29-2build1) ... 782s Selecting previously unselected package libpango-1.0-0:arm64. 782s Preparing to unpack .../65-libpango-1.0-0_1.56.2-1_arm64.deb ... 782s Unpacking libpango-1.0-0:arm64 (1.56.2-1) ... 782s Selecting previously unselected package libpangoft2-1.0-0:arm64. 782s Preparing to unpack .../66-libpangoft2-1.0-0_1.56.2-1_arm64.deb ... 782s Unpacking libpangoft2-1.0-0:arm64 (1.56.2-1) ... 782s Selecting previously unselected package libpangocairo-1.0-0:arm64. 782s Preparing to unpack .../67-libpangocairo-1.0-0_1.56.2-1_arm64.deb ... 782s Unpacking libpangocairo-1.0-0:arm64 (1.56.2-1) ... 782s Selecting previously unselected package libpaper2:arm64. 782s Preparing to unpack .../68-libpaper2_2.2.5-0.3_arm64.deb ... 782s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 782s Selecting previously unselected package libpaper-utils. 782s Preparing to unpack .../69-libpaper-utils_2.2.5-0.3_arm64.deb ... 782s Unpacking libpaper-utils (2.2.5-0.3) ... 782s Selecting previously unselected package libpcre2-16-0:arm64. 782s Preparing to unpack .../70-libpcre2-16-0_10.45-1_arm64.deb ... 782s Unpacking libpcre2-16-0:arm64 (10.45-1) ... 782s Selecting previously unselected package libpcre2-32-0:arm64. 782s Preparing to unpack .../71-libpcre2-32-0_10.45-1_arm64.deb ... 782s Unpacking libpcre2-32-0:arm64 (10.45-1) ... 783s Selecting previously unselected package libpcre2-posix3:arm64. 783s Preparing to unpack .../72-libpcre2-posix3_10.45-1_arm64.deb ... 783s Unpacking libpcre2-posix3:arm64 (10.45-1) ... 783s Selecting previously unselected package libpcre2-dev:arm64. 783s Preparing to unpack .../73-libpcre2-dev_10.45-1_arm64.deb ... 783s Unpacking libpcre2-dev:arm64 (10.45-1) ... 783s Selecting previously unselected package libpkgconf3:arm64. 783s Preparing to unpack .../74-libpkgconf3_1.8.1-4_arm64.deb ... 783s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 783s Selecting previously unselected package zlib1g-dev:arm64. 783s Preparing to unpack .../75-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 783s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 783s Selecting previously unselected package libpng-dev:arm64. 783s Preparing to unpack .../76-libpng-dev_1.6.47-1_arm64.deb ... 783s Unpacking libpng-dev:arm64 (1.6.47-1) ... 783s Selecting previously unselected package libreadline-dev:arm64. 783s Preparing to unpack .../77-libreadline-dev_8.2-6_arm64.deb ... 783s Unpacking libreadline-dev:arm64 (8.2-6) ... 783s Selecting previously unselected package libsharpyuv0:arm64. 783s Preparing to unpack .../78-libsharpyuv0_1.5.0-0.1_arm64.deb ... 783s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 783s Selecting previously unselected package libsm6:arm64. 783s Preparing to unpack .../79-libsm6_2%3a1.2.4-1_arm64.deb ... 783s Unpacking libsm6:arm64 (2:1.2.4-1) ... 783s Selecting previously unselected package libtcl8.6:arm64. 783s Preparing to unpack .../80-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 783s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 783s Selecting previously unselected package libjbig0:arm64. 783s Preparing to unpack .../81-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 783s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 783s Selecting previously unselected package libwebp7:arm64. 783s Preparing to unpack .../82-libwebp7_1.5.0-0.1_arm64.deb ... 783s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 783s Selecting previously unselected package libtiff6:arm64. 783s Preparing to unpack .../83-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 783s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 783s Selecting previously unselected package libxft2:arm64. 783s Preparing to unpack .../84-libxft2_2.3.6-1build1_arm64.deb ... 783s Unpacking libxft2:arm64 (2.3.6-1build1) ... 783s Selecting previously unselected package libxss1:arm64. 783s Preparing to unpack .../85-libxss1_1%3a1.2.3-1build3_arm64.deb ... 783s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 783s Selecting previously unselected package libtk8.6:arm64. 783s Preparing to unpack .../86-libtk8.6_8.6.16-1_arm64.deb ... 783s Unpacking libtk8.6:arm64 (8.6.16-1) ... 783s Selecting previously unselected package libxt6t64:arm64. 783s Preparing to unpack .../87-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 783s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 783s Selecting previously unselected package zip. 783s Preparing to unpack .../88-zip_3.0-14ubuntu2_arm64.deb ... 783s Unpacking zip (3.0-14ubuntu2) ... 783s Selecting previously unselected package unzip. 784s Preparing to unpack .../89-unzip_6.0-28ubuntu6_arm64.deb ... 784s Unpacking unzip (6.0-28ubuntu6) ... 784s Selecting previously unselected package xdg-utils. 784s Preparing to unpack .../90-xdg-utils_1.2.1-2ubuntu1_all.deb ... 784s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 784s Selecting previously unselected package r-base-core. 784s Preparing to unpack .../91-r-base-core_4.4.3-1_arm64.deb ... 784s Unpacking r-base-core (4.4.3-1) ... 784s Selecting previously unselected package liblzma-dev:arm64. 784s Preparing to unpack .../92-liblzma-dev_5.6.4-1_arm64.deb ... 784s Unpacking liblzma-dev:arm64 (5.6.4-1) ... 784s Selecting previously unselected package pkgconf-bin. 784s Preparing to unpack .../93-pkgconf-bin_1.8.1-4_arm64.deb ... 784s Unpacking pkgconf-bin (1.8.1-4) ... 784s Selecting previously unselected package pkgconf:arm64. 784s Preparing to unpack .../94-pkgconf_1.8.1-4_arm64.deb ... 784s Unpacking pkgconf:arm64 (1.8.1-4) ... 784s Selecting previously unselected package libtirpc-dev:arm64. 784s Preparing to unpack .../95-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 784s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 784s Selecting previously unselected package r-base-dev. 784s Preparing to unpack .../96-r-base-dev_4.4.3-1_all.deb ... 784s Unpacking r-base-dev (4.4.3-1) ... 784s Selecting previously unselected package pkg-r-autopkgtest. 784s Preparing to unpack .../97-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 784s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 784s Selecting previously unselected package r-cran-spatstat.utils. 784s Preparing to unpack .../98-r-cran-spatstat.utils_3.1-2-1_arm64.deb ... 784s Unpacking r-cran-spatstat.utils (3.1-2-1) ... 784s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 784s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 784s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 784s Setting up libncurses-dev:arm64 (6.5+20250216-2) ... 784s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 784s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 784s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 784s Setting up libxcb-render0:arm64 (1.17.0-2) ... 784s Setting up unzip (6.0-28ubuntu6) ... 784s Setting up x11-common (1:7.7+23ubuntu3) ... 785s Setting up libdeflate0:arm64 (1.23-1) ... 785s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 785s Setting up libreadline-dev:arm64 (8.2-6) ... 785s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ... 785s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 785s Setting up libpcre2-16-0:arm64 (10.45-1) ... 785s Setting up zip (3.0-14ubuntu2) ... 785s Setting up libpcre2-32-0:arm64 (10.45-1) ... 785s Setting up libblas3:arm64 (3.12.1-2) ... 785s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 785s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 785s Setting up libpkgconf3:arm64 (1.8.1-4) ... 785s Setting up fonts-dejavu-mono (2.37-8) ... 785s Setting up libmpc3:arm64 (1.3.1-1build2) ... 785s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ... 785s Setting up icu-devtools (76.1-1ubuntu2) ... 785s Setting up fonts-dejavu-core (2.37-8) ... 785s Setting up pkgconf-bin (1.8.1-4) ... 785s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 785s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ... 785s Setting up libwebp7:arm64 (1.5.0-0.1) ... 785s Setting up liblzma-dev:arm64 (5.6.4-1) ... 785s Setting up libubsan1:arm64 (15-20250222-0ubuntu1) ... 785s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 785s Setting up libpcre2-posix3:arm64 (10.45-1) ... 785s Setting up libhwasan0:arm64 (15-20250222-0ubuntu1) ... 785s Setting up libasan8:arm64 (15-20250222-0ubuntu1) ... 785s Setting up libharfbuzz0b:arm64 (10.2.0-1) ... 785s Setting up libthai-data (0.1.29-2build1) ... 785s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 785s Setting up libpaper2:arm64 (2.2.5-0.3) ... 785s Setting up libtsan2:arm64 (15-20250222-0ubuntu1) ... 785s Setting up libisl23:arm64 (0.27-1) ... 785s Setting up libdeflate-dev:arm64 (1.23-1) ... 785s Setting up libicu-dev:arm64 (76.1-1ubuntu2) ... 785s Setting up xdg-utils (1.2.1-2ubuntu1) ... 785s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 785s Setting up libcc1-0:arm64 (15-20250222-0ubuntu1) ... 785s Setting up liblsan0:arm64 (15-20250222-0ubuntu1) ... 785s Setting up libblas-dev:arm64 (3.12.1-2) ... 785s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 785s Setting up dctrl-tools (2.24-3build3) ... 785s Setting up libitm1:arm64 (15-20250222-0ubuntu1) ... 785s Setting up libbz2-dev:arm64 (1.0.8-6) ... 785s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 785s Setting up libice6:arm64 (2:1.1.1-1) ... 785s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 785s Setting up liblapack3:arm64 (3.12.1-2) ... 785s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 785s Setting up libpcre2-dev:arm64 (10.45-1) ... 785s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 785s Setting up libpng-dev:arm64 (1.6.47-1) ... 785s Setting up libpaper-utils (2.2.5-0.3) ... 785s Setting up pkgconf:arm64 (1.8.1-4) ... 785s Setting up libthai0:arm64 (0.1.29-2build1) ... 785s Setting up liblapack-dev:arm64 (3.12.1-2) ... 785s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 785s Setting up cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 785s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 785s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 785s Setting up libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 785s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 785s Setting up libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 785s Setting up libsm6:arm64 (2:1.2.4-1) ... 785s Setting up libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 785s Setting up fontconfig (2.15.0-2ubuntu1) ... 787s Regenerating fonts cache... done. 787s Setting up libxft2:arm64 (2.3.6-1build1) ... 787s Setting up libtk8.6:arm64 (8.6.16-1) ... 787s Setting up libpango-1.0-0:arm64 (1.56.2-1) ... 787s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 787s Setting up libcairo2:arm64 (1.18.2-2) ... 787s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 787s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 787s Setting up cpp-14 (14.2.0-17ubuntu3) ... 787s Setting up cpp (4:14.2.0-1ubuntu1) ... 787s Setting up gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 787s Setting up libpangoft2-1.0-0:arm64 (1.56.2-1) ... 787s Setting up libpangocairo-1.0-0:arm64 (1.56.2-1) ... 787s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 787s Setting up g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 787s Setting up gcc-14 (14.2.0-17ubuntu3) ... 787s Setting up r-base-core (4.4.3-1) ... 788s Creating config file /etc/R/Renviron with new version 788s Setting up r-cran-spatstat.utils (3.1-2-1) ... 788s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 788s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 788s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 788s Setting up g++-14 (14.2.0-17ubuntu3) ... 788s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 788s Setting up gcc (4:14.2.0-1ubuntu1) ... 788s Setting up g++ (4:14.2.0-1ubuntu1) ... 788s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 788s Setting up build-essential (12.10ubuntu1) ... 788s Setting up gfortran (4:14.2.0-1ubuntu1) ... 788s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 788s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 788s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 788s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 788s Setting up r-base-dev (4.4.3-1) ... 788s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 788s Processing triggers for libc-bin (2.41-1ubuntu2) ... 788s Processing triggers for man-db (2.13.0-1) ... 790s Processing triggers for install-info (7.1.1-1) ... 794s autopkgtest [16:11:09]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 794s autopkgtest [16:11:09]: test pkg-r-autopkgtest: [----------------------- 794s Test: Try to load the R library spatstat.utils 795s 795s R version 4.4.3 (2025-02-28) -- "Trophy Case" 795s Copyright (C) 2025 The R Foundation for Statistical Computing 795s Platform: aarch64-unknown-linux-gnu 795s 795s R is free software and comes with ABSOLUTELY NO WARRANTY. 795s You are welcome to redistribute it under certain conditions. 795s Type 'license()' or 'licence()' for distribution details. 795s 795s R is a collaborative project with many contributors. 795s Type 'contributors()' for more information and 795s 'citation()' on how to cite R or R packages in publications. 795s 795s Type 'demo()' for some demos, 'help()' for on-line help, or 795s 'help.start()' for an HTML browser interface to help. 795s Type 'q()' to quit R. 795s 795s > library('spatstat.utils') 795s > 795s > 795s Other tests are currently unsupported! 795s They will be progressively added. 795s autopkgtest [16:11:10]: test pkg-r-autopkgtest: -----------------------] 796s autopkgtest [16:11:11]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 796s pkg-r-autopkgtest PASS 796s autopkgtest [16:11:11]: @@@@@@@@@@@@@@@@@@@@ summary 796s generic PASS 796s pkg-r-autopkgtest PASS 815s nova [W] Using flock in prodstack6-arm64 815s Creating nova instance adt-plucky-arm64-r-cran-spatstat.utils-20250315-155755-juju-7f2275-prod-proposed-migration-environment-20-dd6c3513-032f-4a7c-b19a-03d8a112e189 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 815s nova [W] Timed out waiting for 6b9d1881-5d3f-43a2-929a-4688d65089ea to get deleted. 815s nova [W] Using flock in prodstack6-arm64 815s flock: timeout while waiting to get lock 815s Creating nova instance adt-plucky-arm64-r-cran-spatstat.utils-20250315-155755-juju-7f2275-prod-proposed-migration-environment-20-dd6c3513-032f-4a7c-b19a-03d8a112e189 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 815s nova [W] Timed out waiting for dbd78b66-abdf-4d72-a002-eb4e181d06e6 to get deleted.