0s autopkgtest [20:40:38]: starting date and time: 2024-11-23 20:40:38+0000
  0s autopkgtest [20:40:38]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky
  0s autopkgtest [20:40:38]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9fc8qfd2/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-spacetime --apt-upgrade r-cran-spacetime --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-spacetime/1.3-2-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-19.secgroup --name adt-plucky-arm64-r-cran-spacetime-20241123-204038-juju-7f2275-prod-proposed-migration-environment-20-d02bae90-b69f-4799-aa5d-d82875d0a5d9 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 63s autopkgtest [20:41:41]: testbed dpkg architecture: arm64
 63s autopkgtest [20:41:41]: testbed apt version: 2.9.8
 63s autopkgtest [20:41:41]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 64s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
 65s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9704 B]
 65s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.6 kB]
 65s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [925 kB]
 65s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [53.2 kB]
 65s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [85.2 kB]
 65s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [57.8 kB]
 65s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [790 kB]
 65s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [19.3 kB]
 65s Fetched 2028 kB in 1s (2328 kB/s)
 65s Reading package lists...
 68s Reading package lists...
 68s Building dependency tree...
 68s Reading state information...
 68s Calculating upgrade...
 69s The following package was automatically installed and is no longer required:
 69s   libsgutils2-1.46-2
 69s Use 'sudo apt autoremove' to remove it.
 69s The following NEW packages will be installed:
 69s   libsgutils2-1.48
 69s The following packages will be upgraded:
 69s   bash bpftrace curl debconf debconf-i18n distro-info dracut-install
 69s   fwupd-signed gir1.2-girepository-2.0 gir1.2-glib-2.0 hostname
 69s   libaudit-common libaudit1 libcurl3t64-gnutls libcurl4t64
 69s   libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libpam-modules
 69s   libpam-modules-bin libpam-runtime libpam0g libplymouth5 libselinux1
 69s   libsemanage-common libsemanage2 linux-base lxd-installer openssh-client
 69s   openssh-server openssh-sftp-server pinentry-curses plymouth
 69s   plymouth-theme-ubuntu-text python3-blinker python3-dbus python3-debconf
 69s   python3-gi python3-jsonschema-specifications python3-rpds-py python3-yaml
 69s   sg3-utils sg3-utils-udev vim-common vim-tiny xxd
 69s 46 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
 69s Need to get 11.7 MB of archives.
 69s After this operation, 2984 kB of additional disk space will be used.
 69s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 bash arm64 5.2.32-1ubuntu2 [791 kB]
 69s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 hostname arm64 3.25 [11.0 kB]
 69s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libaudit-common all 1:4.0.2-2ubuntu1 [6578 B]
 69s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libaudit1 arm64 1:4.0.2-2ubuntu1 [54.2 kB]
 69s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 debconf-i18n all 1.5.87ubuntu1 [204 kB]
 69s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-debconf all 1.5.87ubuntu1 [4156 B]
 69s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 debconf all 1.5.87ubuntu1 [124 kB]
 69s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam0g arm64 1.5.3-7ubuntu4 [68.6 kB]
 69s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libselinux1 arm64 3.7-3ubuntu1 [81.6 kB]
 69s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam-modules-bin arm64 1.5.3-7ubuntu4 [50.4 kB]
 70s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam-modules arm64 1.5.3-7ubuntu4 [285 kB]
 70s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 openssh-sftp-server arm64 1:9.9p1-3ubuntu2 [36.8 kB]
 70s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 openssh-server arm64 1:9.9p1-3ubuntu2 [524 kB]
 70s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 openssh-client arm64 1:9.9p1-3ubuntu2 [920 kB]
 70s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam-runtime all 1.5.3-7ubuntu4 [40.8 kB]
 70s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libsemanage-common all 3.7-2build1 [7186 B]
 70s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libsemanage2 arm64 3.7-2build1 [92.2 kB]
 70s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 distro-info arm64 1.12 [19.4 kB]
 70s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gir1.2-girepository-2.0 arm64 1.82.0-2 [25.2 kB]
 70s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 gir1.2-glib-2.0 arm64 2.82.2-3 [182 kB]
 70s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1560 kB]
 70s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libgirepository-1.0-1 arm64 1.82.0-2 [83.0 kB]
 70s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libglib2.0-data all 2.82.2-3 [51.7 kB]
 70s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dbus arm64 1.3.2-5build4 [109 kB]
 70s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-gi arm64 3.50.0-3build1 [279 kB]
 70s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-yaml arm64 6.0.2-1build1 [164 kB]
 70s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 vim-tiny arm64 2:9.1.0861-1ubuntu1 [805 kB]
 70s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 vim-common all 2:9.1.0861-1ubuntu1 [395 kB]
 70s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 xxd arm64 2:9.1.0861-1ubuntu1 [67.3 kB]
 70s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libplymouth5 arm64 24.004.60-2ubuntu3 [141 kB]
 70s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 plymouth-theme-ubuntu-text arm64 24.004.60-2ubuntu3 [9914 B]
 70s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 plymouth arm64 24.004.60-2ubuntu3 [135 kB]
 70s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 bpftrace arm64 0.21.2-2ubuntu3 [1854 kB]
 70s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 curl arm64 8.9.1-2ubuntu3 [235 kB]
 70s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libcurl4t64 arm64 8.9.1-2ubuntu3 [365 kB]
 70s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 dracut-install arm64 105-2ubuntu2 [34.7 kB]
 70s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 fwupd-signed arm64 1.55+1.7-1 [30.9 kB]
 70s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libcurl3t64-gnutls arm64 8.9.1-2ubuntu3 [359 kB]
 70s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libsgutils2-1.48 arm64 1.48-0ubuntu1 [118 kB]
 70s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 linux-base all 4.10.1ubuntu1 [34.8 kB]
 70s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 lxd-installer all 10 [5264 B]
 70s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-0ubuntu2 [38.5 kB]
 70s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-blinker all 1.9.0-1 [10.7 kB]
 70s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-rpds-py arm64 0.21.0-2ubuntu1 [302 kB]
 70s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jsonschema-specifications all 2023.12.1-2 [9116 B]
 70s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 sg3-utils arm64 1.48-0ubuntu1 [999 kB]
 70s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 sg3-utils-udev all 1.48-0ubuntu1 [6608 B]
 70s Preconfiguring packages ...
 71s Fetched 11.7 MB in 1s (10.3 MB/s)
 71s (Reading database ... 
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 71s Preparing to unpack .../bash_5.2.32-1ubuntu2_arm64.deb ...
 71s Unpacking bash (5.2.32-1ubuntu2) over (5.2.32-1ubuntu1) ...
 71s Setting up bash (5.2.32-1ubuntu2) ...
 71s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode
 71s (Reading database ... 
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 71s Preparing to unpack .../hostname_3.25_arm64.deb ...
 71s Unpacking hostname (3.25) over (3.23+nmu2ubuntu2) ...
 71s Setting up hostname (3.25) ...
 71s (Reading database ... 
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 71s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu1_all.deb ...
 71s Unpacking libaudit-common (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ...
 71s Setting up libaudit-common (1:4.0.2-2ubuntu1) ...
 71s (Reading database ... 
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 71s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu1_arm64.deb ...
 71s Unpacking libaudit1:arm64 (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ...
 71s Setting up libaudit1:arm64 (1:4.0.2-2ubuntu1) ...
 71s (Reading database ... 
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 71s Preparing to unpack .../debconf-i18n_1.5.87ubuntu1_all.deb ...
 71s Unpacking debconf-i18n (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
 71s Preparing to unpack .../python3-debconf_1.5.87ubuntu1_all.deb ...
 72s Unpacking python3-debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
 72s Preparing to unpack .../debconf_1.5.87ubuntu1_all.deb ...
 72s Unpacking debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
 72s Setting up debconf (1.5.87ubuntu1) ...
 72s (Reading database ... 
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 72s Preparing to unpack .../libpam0g_1.5.3-7ubuntu4_arm64.deb ...
 72s Unpacking libpam0g:arm64 (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
 72s Setting up libpam0g:arm64 (1.5.3-7ubuntu4) ...
 72s (Reading database ... 
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 72s Preparing to unpack .../libselinux1_3.7-3ubuntu1_arm64.deb ...
 72s Unpacking libselinux1:arm64 (3.7-3ubuntu1) over (3.5-2ubuntu5) ...
 72s Setting up libselinux1:arm64 (3.7-3ubuntu1) ...
 72s (Reading database ... 
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 72s Preparing to unpack .../libpam-modules-bin_1.5.3-7ubuntu4_arm64.deb ...
 72s Unpacking libpam-modules-bin (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
 72s Setting up libpam-modules-bin (1.5.3-7ubuntu4) ...
 72s pam_namespace.service is a disabled or a static unit not running, not starting it.
 73s (Reading database ... 
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 73s Preparing to unpack .../libpam-modules_1.5.3-7ubuntu4_arm64.deb ...
 73s Unpacking libpam-modules:arm64 (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
 73s Setting up libpam-modules:arm64 (1.5.3-7ubuntu4) ...
 73s (Reading database ... 
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 73s Preparing to unpack .../openssh-sftp-server_1%3a9.9p1-3ubuntu2_arm64.deb ...
 73s Unpacking openssh-sftp-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
 73s Preparing to unpack .../openssh-server_1%3a9.9p1-3ubuntu2_arm64.deb ...
 73s Unpacking openssh-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
 73s Preparing to unpack .../openssh-client_1%3a9.9p1-3ubuntu2_arm64.deb ...
 73s Unpacking openssh-client (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
 73s Preparing to unpack .../libpam-runtime_1.5.3-7ubuntu4_all.deb ...
 73s Unpacking libpam-runtime (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
 73s Setting up libpam-runtime (1.5.3-7ubuntu4) ...
 73s (Reading database ... 
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 73s Preparing to unpack .../libsemanage-common_3.7-2build1_all.deb ...
 73s Unpacking libsemanage-common (3.7-2build1) over (3.5-1build6) ...
 73s Setting up libsemanage-common (3.7-2build1) ...
 73s (Reading database ... 
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 73s Preparing to unpack .../libsemanage2_3.7-2build1_arm64.deb ...
 73s Unpacking libsemanage2:arm64 (3.7-2build1) over (3.5-1build6) ...
 73s Setting up libsemanage2:arm64 (3.7-2build1) ...
 74s (Reading database ... 
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 74s Preparing to unpack .../00-distro-info_1.12_arm64.deb ...
 74s Unpacking distro-info (1.12) over (1.9) ...
 74s Preparing to unpack .../01-gir1.2-girepository-2.0_1.82.0-2_arm64.deb ...
 74s Unpacking gir1.2-girepository-2.0:arm64 (1.82.0-2) over (1.80.1-4) ...
 74s Preparing to unpack .../02-gir1.2-glib-2.0_2.82.2-3_arm64.deb ...
 74s Unpacking gir1.2-glib-2.0:arm64 (2.82.2-3) over (2.82.1-0ubuntu1) ...
 74s Preparing to unpack .../03-libglib2.0-0t64_2.82.2-3_arm64.deb ...
 74s Unpacking libglib2.0-0t64:arm64 (2.82.2-3) over (2.82.1-0ubuntu1) ...
 74s Preparing to unpack .../04-libgirepository-1.0-1_1.82.0-2_arm64.deb ...
 74s Unpacking libgirepository-1.0-1:arm64 (1.82.0-2) over (1.80.1-4) ...
 74s Preparing to unpack .../05-libglib2.0-data_2.82.2-3_all.deb ...
 74s Unpacking libglib2.0-data (2.82.2-3) over (2.82.1-0ubuntu1) ...
 74s Preparing to unpack .../06-python3-dbus_1.3.2-5build4_arm64.deb ...
 74s Unpacking python3-dbus (1.3.2-5build4) over (1.3.2-5build3) ...
 74s Preparing to unpack .../07-python3-gi_3.50.0-3build1_arm64.deb ...
 74s Unpacking python3-gi (3.50.0-3build1) over (3.50.0-3) ...
 74s Preparing to unpack .../08-python3-yaml_6.0.2-1build1_arm64.deb ...
 74s Unpacking python3-yaml (6.0.2-1build1) over (6.0.2-1) ...
 74s Preparing to unpack .../09-vim-tiny_2%3a9.1.0861-1ubuntu1_arm64.deb ...
 74s Unpacking vim-tiny (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ...
 74s Preparing to unpack .../10-vim-common_2%3a9.1.0861-1ubuntu1_all.deb ...
 74s Unpacking vim-common (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ...
 74s Preparing to unpack .../11-xxd_2%3a9.1.0861-1ubuntu1_arm64.deb ...
 74s Unpacking xxd (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ...
 74s Preparing to unpack .../12-libplymouth5_24.004.60-2ubuntu3_arm64.deb ...
 74s Unpacking libplymouth5:arm64 (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ...
 74s Preparing to unpack .../13-plymouth-theme-ubuntu-text_24.004.60-2ubuntu3_arm64.deb ...
 74s Unpacking plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ...
 74s Preparing to unpack .../14-plymouth_24.004.60-2ubuntu3_arm64.deb ...
 74s Unpacking plymouth (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ...
 74s Preparing to unpack .../15-bpftrace_0.21.2-2ubuntu3_arm64.deb ...
 74s Unpacking bpftrace (0.21.2-2ubuntu3) over (0.21.2-2ubuntu2) ...
 75s Preparing to unpack .../16-curl_8.9.1-2ubuntu3_arm64.deb ...
 75s Unpacking curl (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ...
 75s Preparing to unpack .../17-libcurl4t64_8.9.1-2ubuntu3_arm64.deb ...
 75s Unpacking libcurl4t64:arm64 (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ...
 75s Preparing to unpack .../18-dracut-install_105-2ubuntu2_arm64.deb ...
 75s Unpacking dracut-install (105-2ubuntu2) over (105-1ubuntu1) ...
 75s Preparing to unpack .../19-fwupd-signed_1.55+1.7-1_arm64.deb ...
 75s Unpacking fwupd-signed (1.55+1.7-1) over (1.54+1.6-1build1) ...
 75s Preparing to unpack .../20-libcurl3t64-gnutls_8.9.1-2ubuntu3_arm64.deb ...
 75s Unpacking libcurl3t64-gnutls:arm64 (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ...
 75s Selecting previously unselected package libsgutils2-1.48:arm64.
 75s Preparing to unpack .../21-libsgutils2-1.48_1.48-0ubuntu1_arm64.deb ...
 75s Unpacking libsgutils2-1.48:arm64 (1.48-0ubuntu1) ...
 75s Preparing to unpack .../22-linux-base_4.10.1ubuntu1_all.deb ...
 75s Unpacking linux-base (4.10.1ubuntu1) over (4.5ubuntu9) ...
 75s Preparing to unpack .../23-lxd-installer_10_all.deb ...
 75s Unpacking lxd-installer (10) over (9) ...
 75s Preparing to unpack .../24-pinentry-curses_1.3.1-0ubuntu2_arm64.deb ...
 75s Unpacking pinentry-curses (1.3.1-0ubuntu2) over (1.2.1-3ubuntu5) ...
 75s Preparing to unpack .../25-python3-blinker_1.9.0-1_all.deb ...
 75s Unpacking python3-blinker (1.9.0-1) over (1.8.2-1) ...
 75s Preparing to unpack .../26-python3-rpds-py_0.21.0-2ubuntu1_arm64.deb ...
 75s Unpacking python3-rpds-py (0.21.0-2ubuntu1) over (0.20.0-0ubuntu3) ...
 75s Preparing to unpack .../27-python3-jsonschema-specifications_2023.12.1-2_all.deb ...
 75s Unpacking python3-jsonschema-specifications (2023.12.1-2) over (2023.12.1-1ubuntu1) ...
 75s Preparing to unpack .../28-sg3-utils_1.48-0ubuntu1_arm64.deb ...
 75s Unpacking sg3-utils (1.48-0ubuntu1) over (1.46-3ubuntu5) ...
 75s Preparing to unpack .../29-sg3-utils-udev_1.48-0ubuntu1_all.deb ...
 75s Unpacking sg3-utils-udev (1.48-0ubuntu1) over (1.46-3ubuntu5) ...
 75s Setting up pinentry-curses (1.3.1-0ubuntu2) ...
 75s Setting up distro-info (1.12) ...
 75s Setting up linux-base (4.10.1ubuntu1) ...
 75s Setting up libcurl4t64:arm64 (8.9.1-2ubuntu3) ...
 75s Setting up bpftrace (0.21.2-2ubuntu3) ...
 75s Setting up openssh-client (1:9.9p1-3ubuntu2) ...
 76s Setting up python3-debconf (1.5.87ubuntu1) ...
 76s Setting up libcurl3t64-gnutls:arm64 (8.9.1-2ubuntu3) ...
 76s Setting up fwupd-signed (1.55+1.7-1) ...
 76s Setting up libsgutils2-1.48:arm64 (1.48-0ubuntu1) ...
 76s Setting up python3-yaml (6.0.2-1build1) ...
 76s Setting up debconf-i18n (1.5.87ubuntu1) ...
 76s Setting up xxd (2:9.1.0861-1ubuntu1) ...
 76s Setting up libglib2.0-0t64:arm64 (2.82.2-3) ...
 76s No schema files found: doing nothing.
 76s Setting up libglib2.0-data (2.82.2-3) ...
 76s Setting up vim-common (2:9.1.0861-1ubuntu1) ...
 76s Setting up gir1.2-glib-2.0:arm64 (2.82.2-3) ...
 76s Setting up lxd-installer (10) ...
 76s Setting up python3-rpds-py (0.21.0-2ubuntu1) ...
 76s Setting up dracut-install (105-2ubuntu2) ...
 76s Setting up libplymouth5:arm64 (24.004.60-2ubuntu3) ...
 76s Setting up libgirepository-1.0-1:arm64 (1.82.0-2) ...
 76s Setting up curl (8.9.1-2ubuntu3) ...
 76s Setting up python3-jsonschema-specifications (2023.12.1-2) ...
 77s Setting up sg3-utils (1.48-0ubuntu1) ...
 77s Setting up python3-blinker (1.9.0-1) ...
 77s Setting up openssh-sftp-server (1:9.9p1-3ubuntu2) ...
 77s Setting up python3-dbus (1.3.2-5build4) ...
 77s Setting up openssh-server (1:9.9p1-3ubuntu2) ...
 77s Installing new version of config file /etc/ssh/moduli ...
 77s Replacing config file /etc/ssh/sshd_config with new version
 78s Setting up plymouth (24.004.60-2ubuntu3) ...
 78s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
 78s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
 94s flash-kernel: deferring update (trigger activated)
 94s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
 94s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
 94s Setting up vim-tiny (2:9.1.0861-1ubuntu1) ...
 94s Setting up sg3-utils-udev (1.48-0ubuntu1) ...
 94s update-initramfs: deferring update (trigger activated)
 94s Setting up plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) ...
 94s update-initramfs: deferring update (trigger activated)
 94s Setting up gir1.2-girepository-2.0:arm64 (1.82.0-2) ...
 94s Setting up python3-gi (3.50.0-3build1) ...
 94s Processing triggers for install-info (7.1.1-1) ...
 94s Processing triggers for initramfs-tools (0.142ubuntu35) ...
 94s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
 94s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
108s System running in EFI mode, skipping.
108s Processing triggers for libc-bin (2.40-1ubuntu3) ...
108s Processing triggers for ufw (0.36.2-8) ...
108s Processing triggers for man-db (2.13.0-1) ...
110s Processing triggers for debianutils (5.21) ...
110s Processing triggers for flash-kernel (3.107ubuntu13) ...
110s System running in EFI mode, skipping.
111s Reading package lists...
111s Building dependency tree...
111s Reading state information...
112s The following packages will be REMOVED:
112s   libsgutils2-1.46-2*
112s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
112s After this operation, 314 kB disk space will be freed.
112s (Reading database ... 
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(Reading database ... 80037 files and directories currently installed.)
112s Removing libsgutils2-1.46-2:arm64 (1.46-3ubuntu5) ...
112s Processing triggers for libc-bin (2.40-1ubuntu3) ...
113s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
113s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
113s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
113s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
114s Reading package lists...
114s Reading package lists...
114s Building dependency tree...
114s Reading state information...
115s Calculating upgrade...
115s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
115s Reading package lists...
115s Building dependency tree...
115s Reading state information...
116s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
116s autopkgtest [20:42:34]: rebooting testbed after setup commands that affected boot
140s autopkgtest [20:42:58]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024
143s autopkgtest [20:43:01]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-spacetime
145s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-spacetime 1.3-2-1 (dsc) [2400 B]
145s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-spacetime 1.3-2-1 (tar) [2319 kB]
145s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-spacetime 1.3-2-1 (diff) [3240 B]
145s gpgv: Signature made Tue Oct  1 00:22:51 2024 UTC
145s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
145s gpgv:                issuer "plessy@debian.org"
145s gpgv: Can't check signature: No public key
145s dpkg-source: warning: cannot verify inline signature for ./r-cran-spacetime_1.3-2-1.dsc: no acceptable signature found
145s autopkgtest [20:43:03]: testing package r-cran-spacetime version 1.3-2-1
146s autopkgtest [20:43:04]: build not needed
149s autopkgtest [20:43:07]: test run-unit-test: preparing testbed
153s Reading package lists...
153s Building dependency tree...
153s Reading state information...
153s Starting pkgProblemResolver with broken count: 0
154s Starting 2 pkgProblemResolver with broken count: 0
154s Done
154s The following additional packages will be installed:
154s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
154s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data
154s   gdal-plugins javascript-common libaec0 libaom3 libarmadillo14 libarpack2t64
154s   libblas3 libblosc1 libcairo2 libcfitsio10t64 libdatrie1 libde265-0
154s   libdeflate0 libfontconfig1 libfreexl1 libfyba0t64 libgdal35 libgeos-c1t64
154s   libgeos3.13.0 libgeotiff5 libgfortran5 libgif7 libgomp1 libgpgmepp6t64
154s   libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64
154s   libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1
154s   libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4
154s   libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
154s   libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
154s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
154s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
154s   libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4
154s   libltdl7 liblua5.4-0 libminizip1t64 libmysqlclient21 libnetcdf19t64 libodbc2
154s   libodbcinst2 libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0
154s   libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpoppler140
154s   libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5
154s   libspatialite8t64 libsz2 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6
154s   libudunits2-0 libudunits2-data liburiparser1 libwebp7 libxcb-render0
154s   libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler
154s   mysql-common node-bootstrap-sass node-html5shiv node-normalize.css pandoc
154s   pandoc-data proj-data r-base-core r-cran-abind r-cran-base64enc
154s   r-cran-bdsmatrix r-cran-bslib r-cran-cachem r-cran-class r-cran-classint
154s   r-cran-cli r-cran-collapse r-cran-commonmark r-cran-crayon r-cran-dbi
154s   r-cran-digest r-cran-e1071 r-cran-evaluate r-cran-fastmap r-cran-fnn
154s   r-cran-fontawesome r-cran-foreign r-cran-formula r-cran-fs r-cran-generics
154s   r-cran-glue r-cran-gstat r-cran-highr r-cran-htmltools r-cran-httpuv
154s   r-cran-intervals r-cran-isocodes r-cran-jquerylib r-cran-jsonlite
154s   r-cran-kernsmooth r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle
154s   r-cran-littler r-cran-lmtest r-cran-magrittr r-cran-mapdata r-cran-maps
154s   r-cran-markdown r-cran-mass r-cran-maxlik r-cran-memoise r-cran-mime
154s   r-cran-misctools r-cran-nlme r-cran-pkgkitten r-cran-plm r-cran-promises
154s   r-cran-proxy r-cran-r6 r-cran-rappdirs r-cran-raster r-cran-rbibutils
154s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rmarkdown
154s   r-cran-rpostgresql r-cran-s2 r-cran-sandwich r-cran-sass r-cran-sf
154s   r-cran-sftime r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime
154s   r-cran-stars r-cran-terra r-cran-tinytex r-cran-units r-cran-withr r-cran-wk
154s   r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common
154s   unzip x11-common xdg-utils zip
154s Suggested packages:
154s   apache2 | lighttpd | httpd geotiff-bin gdal-bin libgeotiff-epsg
154s   libhdf4-alt-dev hdf4-tools libheif-plugin-x265 libheif-plugin-ffmpegdec
154s   libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec
154s   libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e
154s   libheif-plugin-svtenc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix
154s   libjs-mathjax-doc liblcms2-utils odbc-postgresql tdsodbc ogdi-bin proj-bin
154s   tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex
154s   pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff
154s   ghc php python ruby libjs-katex citation-style-language-styles elpa-ess
154s   r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-rstudioapi r-cran-rmysql
154s   r-cran-mvtnorm r-cran-covr r-cran-tibble r-cran-testthat r-cran-getopt
154s   r-cran-mapproj r-cran-httr r-cran-roxygen2 r-cran-inline r-cran-survival
154s Recommended packages:
154s   proj-bin libheif-plugin-aomenc node-jquery poppler-data r-recommended
154s   r-base-dev r-doc-html r-cran-curl r-cran-future r-cran-ggplot2
154s   r-cran-testthat r-cran-thematic r-cran-spdata r-cran-tinytest r-cran-callr
154s   r-cran-covr r-cran-htmlwidgets r-cran-mockery r-cran-processx r-cran-ps
154s   r-cran-rprojroot r-cran-rstudioapi r-cran-tibble r-cran-whoami
154s   r-cran-data.table r-cran-rcpparmadillo r-cran-rcppeigen r-cran-dplyr
154s   r-cran-scales r-cran-microbenchmark r-cran-xml2 r-cran-rsvg r-cran-pillar
154s   r-cran-spelling r-cran-vctrs r-cran-pkgload r-cran-rsqlite r-cran-waldo
154s   r-cran-fields r-cran-future.apply r-cran-testit r-cran-cairo r-cran-ragg
154s   r-cran-httr r-cran-r.rsp r-cran-codetools r-cran-formatr r-cran-gridsvg
154s   r-cran-jpeg r-cran-magick r-cran-png r-cran-reticulate r-cran-rgl
154s   r-cran-tikzdevice r-cran-webshot r-cran-svglite node-highlight.js
154s   r-cran-lintr r-cran-tidyverse r-cran-rcurl r-cran-clue r-cran-plot3d
154s   r-cran-runit r-cran-aer r-cran-car r-cran-spdep r-cran-statmod r-cran-urca
154s   r-cran-bookdown r-cran-purrr r-cran-cba r-cran-ncdf4 r-cran-igraph
154s   r-cran-exactextractr r-cran-gbrd r-cran-usethis r-cran-dygraphs
154s   r-cran-rsconnect r-cran-downlit r-cran-bit64 r-cran-blob r-cran-nanoarrow
154s   r-cran-lwgeom r-cran-matrix r-cran-pbapply r-cran-spatstat
154s   r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.linnet
154s   r-cran-spatstat.utils r-cran-tidyr r-cran-tidyselect r-cran-ncmeta r-cran-dt
154s   r-cran-deldir r-cran-pcict r-cran-rnetcdf r-cran-cubelyr r-cran-ggforce
154s   r-cran-ggthemes r-cran-ncdfgeom r-cran-randomforest r-cran-viridis
154s   r-cran-xml r-cran-vdiffr r-cran-readr r-cran-remotes r-cran-renv
154s   r-cran-timeseries r-cran-timedate r-cran-tseries r-cran-chron
154s   libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
154s   x11-xserver-utils
154s The following NEW packages will be installed:
154s   autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core
154s   fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings
154s   fonts-mathjax gdal-data gdal-plugins javascript-common libaec0 libaom3
154s   libarmadillo14 libarpack2t64 libblas3 libblosc1 libcairo2 libcfitsio10t64
154s   libdatrie1 libde265-0 libdeflate0 libfontconfig1 libfreexl1 libfyba0t64
154s   libgdal35 libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran5 libgif7
154s   libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b libhdf4-0-alt
154s   libhdf5-103-1t64 libhdf5-hl-100t64 libheif-plugin-aomdec
154s   libheif-plugin-libde265 libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8
154s   libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js
154s   libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js
154s   libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js
154s   libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js
154s   libjs-twitter-bootstrap-datepicker libkmlbase1t64 libkmldom1t64
154s   libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 liblua5.4-0
154s   libminizip1t64 libmysqlclient21 libnetcdf19t64 libodbc2 libodbcinst2
154s   libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
154s   libpaper-utils libpaper1 libpixman-1-0 libpoppler140 libpq5 libproj25
154s   libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64
154s   libsz2 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libudunits2-0
154s   libudunits2-data liburiparser1 libwebp7 libxcb-render0 libxcb-shm0
154s   libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler mysql-common
154s   node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data
154s   proj-data r-base-core r-cran-abind r-cran-base64enc r-cran-bdsmatrix
154s   r-cran-bslib r-cran-cachem r-cran-class r-cran-classint r-cran-cli
154s   r-cran-collapse r-cran-commonmark r-cran-crayon r-cran-dbi r-cran-digest
154s   r-cran-e1071 r-cran-evaluate r-cran-fastmap r-cran-fnn r-cran-fontawesome
154s   r-cran-foreign r-cran-formula r-cran-fs r-cran-generics r-cran-glue
154s   r-cran-gstat r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-intervals
154s   r-cran-isocodes r-cran-jquerylib r-cran-jsonlite r-cran-kernsmooth
154s   r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler
154s   r-cran-lmtest r-cran-magrittr r-cran-mapdata r-cran-maps r-cran-markdown
154s   r-cran-mass r-cran-maxlik r-cran-memoise r-cran-mime r-cran-misctools
154s   r-cran-nlme r-cran-pkgkitten r-cran-plm r-cran-promises r-cran-proxy
154s   r-cran-r6 r-cran-rappdirs r-cran-raster r-cran-rbibutils r-cran-rcolorbrewer
154s   r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rmarkdown r-cran-rpostgresql
154s   r-cran-s2 r-cran-sandwich r-cran-sass r-cran-sf r-cran-sftime r-cran-shiny
154s   r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-stars r-cran-terra
154s   r-cran-tinytex r-cran-units r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable
154s   r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common unzip x11-common xdg-utils
154s   zip
154s 0 upgraded, 205 newly installed, 0 to remove and 0 not upgraded.
154s Need to get 203 MB/203 MB of archives.
154s After this operation, 638 MB of additional disk space will be used.
154s Get:1 /tmp/autopkgtest.rnapaj/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [800 B]
155s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
155s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
155s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB]
155s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB]
155s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB]
155s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
155s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
155s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
155s Get:10 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-data all 3.9.3+dfsg-1build1 [269 kB]
155s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-plugins arm64 3.9.3+dfsg-1build1 [25.3 kB]
155s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 11+nmu1 [5936 B]
155s Get:13 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB]
155s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libaom3 arm64 3.11.0-1 [1837 kB]
155s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB]
155s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB]
155s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB]
155s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarpack2t64 arm64 3.9.1-1.1ubuntu1 [94.3 kB]
155s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarmadillo14 arm64 1:14.0.1+dfsg-2build1 [104 kB]
155s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB]
155s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 libblosc1 arm64 1.21.5+ds-1build1 [25.7 kB]
155s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
155s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
155s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
155s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
155s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
155s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcfitsio10t64 arm64 4.4.1-2 [511 kB]
155s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
155s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libde265-0 arm64 1.0.15-1build4 [146 kB]
156s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB]
156s Get:31 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfyba0t64 arm64 4.1.1-11build1 [120 kB]
156s Get:32 http://ftpmaster.internal/ubuntu plucky/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [23.1 kB]
156s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfreexl1 arm64 2.0.0-1build2 [41.9 kB]
156s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos3.13.0 arm64 3.13.0-1 [918 kB]
156s Get:35 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos-c1t64 arm64 3.13.0-1 [92.6 kB]
156s Get:36 http://ftpmaster.internal/ubuntu plucky/universe arm64 proj-data all 9.5.0-1 [7919 kB]
156s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
156s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
156s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
156s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
156s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB]
156s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB]
156s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
156s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 libproj25 arm64 9.5.0-1 [1339 kB]
156s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeotiff5 arm64 1.7.3-1 [60.8 kB]
156s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB]
156s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B]
156s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf4-0-alt arm64 4.3.0-1 [271 kB]
156s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB]
156s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-aomdec arm64 1.19.3-1 [11.3 kB]
156s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-libde265 arm64 1.19.3-1 [8722 B]
156s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif1 arm64 1.19.3-1 [362 kB]
156s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB]
156s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlbase1t64 arm64 1.3.0-12build1 [47.8 kB]
156s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmldom1t64 arm64 1.3.0-12build1 [146 kB]
156s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlengine1t64 arm64 1.3.0-12build1 [68.1 kB]
156s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 mysql-common all 5.8+1.1.1 [6800 B]
156s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libmysqlclient21 arm64 8.0.40-1 [1241 kB]
156s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB]
156s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnetcdf19t64 arm64 1:4.9.2-6ubuntu1 [466 kB]
156s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libltdl7 arm64 2.4.7-8 [40.6 kB]
156s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbc2 arm64 2.3.12-1ubuntu1 [145 kB]
156s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B]
156s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbcinst2 arm64 2.3.12-1ubuntu1 [29.8 kB]
156s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 libogdi4.1 arm64 4.1.1+ds-5 [217 kB]
156s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu1 [182 kB]
156s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libgpgmepp6t64 arm64 1.24.0-2ubuntu1 [119 kB]
156s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB]
156s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libpoppler140 arm64 24.08.0-3 [1124 kB]
156s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libpq5 arm64 17.0-1 [248 kB]
156s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB]
156s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 librttopo1 arm64 1.1.0-3build2 [187 kB]
156s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 libspatialite8t64 arm64 5.1.0-3build1 [1814 kB]
156s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3 [874 kB]
156s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgdal35 arm64 3.9.3+dfsg-1build1 [8678 kB]
156s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB]
156s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
156s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.0.1-1 [487 kB]
156s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
156s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
156s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
156s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
156s Get:83 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB]
156s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB]
157s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
157s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
157s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
157s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
157s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
157s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
157s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
157s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
157s Get:93 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
157s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
157s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.6-3build2 [158 kB]
157s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
157s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
157s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-3 [234 kB]
157s Get:99 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-3 [48.9 kB]
157s Get:100 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-3 [27.5 kB]
157s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper1 arm64 1.1.29build1 [13.4 kB]
157s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 1.1.29build1 [8490 B]
157s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
157s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [987 kB]
157s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
157s Get:106 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
157s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.15-1 [774 kB]
157s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-data all 2.2.28-7build1 [19.4 kB]
157s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-0 arm64 2.2.28-7build1 [52.8 kB]
157s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
157s Get:111 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu1 [172 kB]
157s Get:112 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
157s Get:113 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB]
157s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.2-1 [28.4 MB]
158s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-1 [96.4 kB]
158s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-1 [2486 B]
158s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB]
158s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
158s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB]
158s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3 [78.7 kB]
158s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB]
159s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB]
159s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB]
159s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bdsmatrix arm64 1.3-7-1 [300 kB]
159s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.4-1 [1707 kB]
159s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB]
159s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB]
159s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB]
159s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB]
159s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
159s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB]
159s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB]
159s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB]
159s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
159s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB]
159s Get:136 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB]
159s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.4+dfsg-1 [244 kB]
159s Get:138 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB]
159s Get:139 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB]
159s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB]
159s Get:141 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB]
159s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-61-1 [1107 kB]
159s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-class arm64 7.3-22-2build1 [88.3 kB]
159s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB]
159s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-e1071 arm64 1.7-16-1 [563 kB]
159s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-kernsmooth arm64 2.23-24-1 [92.6 kB]
159s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-classint arm64 0.4-10+dfsg-1 [106 kB]
159s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
159s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.13-1-1 [1973 kB]
159s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-collapse arm64 2.0.16-1 [3258 kB]
159s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB]
159s Get:152 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB]
159s Get:153 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB]
159s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.0-1 [111 kB]
159s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fnn arm64 1.1.4.1-1 [125 kB]
159s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB]
159s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-foreign arm64 0.8.87-1 [243 kB]
159s Get:158 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formula all 1.2-5-1 [158 kB]
160s Get:159 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB]
160s Get:160 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB]
160s Get:161 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sp arm64 1:2.1-4+dfsg-1 [1472 kB]
160s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-zoo arm64 1.8-12-2 [984 kB]
160s Get:163 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
160s Get:164 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-wk arm64 0.9.4-1 [1790 kB]
160s Get:165 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-s2 arm64 1.1.7-1 [1987 kB]
160s Get:166 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-units arm64 0.8-5+dfsg-1 [270 kB]
160s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sf arm64 1.0-16+dfsg-1build1 [3023 kB]
160s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sftime all 0.2-0-6 [168 kB]
160s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xts arm64 0.14.0-1 [760 kB]
160s Get:170 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-intervals arm64 0.15.5-1 [602 kB]
160s Get:171 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-spacetime all 1.3-2-1 [2776 kB]
160s Get:172 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stars all 0.6-6-1 [4105 kB]
160s Get:173 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gstat arm64 2.1-2-1 [2332 kB]
160s Get:174 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.49+dfsg-1 [544 kB]
160s Get:175 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
160s Get:176 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB]
160s Get:177 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.0+dfsg-1 [286 kB]
160s Get:178 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB]
160s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isocodes all 2024.02.12-1 [312 kB]
160s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB]
160s Get:181 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
160s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.48+dfsg-1 [910 kB]
160s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lmtest arm64 0.9.40-1 [396 kB]
160s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-maps arm64 3.4.2-1 [2362 kB]
160s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mapdata arm64 2.3.1-1 [23.5 MB]
161s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-markdown all 1.12+dfsg-2 [179 kB]
161s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-misctools all 0.6-28-1 [99.9 kB]
161s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB]
161s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-maxlik all 1.5-2.1-1 [1083 kB]
161s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.166-1 [2312 kB]
161s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB]
161s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rdpack all 2.6.2-1 [757 kB]
161s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plm all 2.6-4-1 [2161 kB]
161s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-terra arm64 1.7-78-1 [3661 kB]
161s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-raster arm64 3.6-30-1 [3128 kB]
161s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
161s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.53-1 [145 kB]
161s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB]
161s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB]
161s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB]
161s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
161s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
161s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB]
162s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB]
162s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rpostgresql arm64 0.7-7+dfsg-1 [364 kB]
163s Preconfiguring packages ...
163s Fetched 203 MB in 8s (26.3 MB/s)
163s Selecting previously unselected package fonts-dejavu-mono.
163s (Reading database ... 
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163s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ...
163s Unpacking fonts-dejavu-mono (2.37-8) ...
163s Selecting previously unselected package fonts-dejavu-core.
163s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ...
163s Unpacking fonts-dejavu-core (2.37-8) ...
163s Selecting previously unselected package fontconfig-config.
163s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ...
163s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
163s Selecting previously unselected package libfontconfig1:arm64.
164s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ...
164s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ...
164s Selecting previously unselected package fontconfig.
164s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ...
164s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
164s Selecting previously unselected package fonts-font-awesome.
164s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
164s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
164s Selecting previously unselected package fonts-glyphicons-halflings.
164s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
164s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
164s Selecting previously unselected package fonts-mathjax.
164s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
164s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
164s Selecting previously unselected package gdal-data.
164s Preparing to unpack .../008-gdal-data_3.9.3+dfsg-1build1_all.deb ...
164s Unpacking gdal-data (3.9.3+dfsg-1build1) ...
164s Selecting previously unselected package gdal-plugins:arm64.
164s Preparing to unpack .../009-gdal-plugins_3.9.3+dfsg-1build1_arm64.deb ...
164s Unpacking gdal-plugins:arm64 (3.9.3+dfsg-1build1) ...
164s Selecting previously unselected package javascript-common.
164s Preparing to unpack .../010-javascript-common_11+nmu1_all.deb ...
164s Unpacking javascript-common (11+nmu1) ...
164s Selecting previously unselected package libaec0:arm64.
164s Preparing to unpack .../011-libaec0_1.1.3-1_arm64.deb ...
164s Unpacking libaec0:arm64 (1.1.3-1) ...
164s Selecting previously unselected package libaom3:arm64.
164s Preparing to unpack .../012-libaom3_3.11.0-1_arm64.deb ...
164s Unpacking libaom3:arm64 (3.11.0-1) ...
164s Selecting previously unselected package libblas3:arm64.
164s Preparing to unpack .../013-libblas3_3.12.0-3build2_arm64.deb ...
164s Unpacking libblas3:arm64 (3.12.0-3build2) ...
164s Selecting previously unselected package libgfortran5:arm64.
164s Preparing to unpack .../014-libgfortran5_14.2.0-8ubuntu1_arm64.deb ...
164s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ...
164s Selecting previously unselected package liblapack3:arm64.
164s Preparing to unpack .../015-liblapack3_3.12.0-3build2_arm64.deb ...
164s Unpacking liblapack3:arm64 (3.12.0-3build2) ...
164s Selecting previously unselected package libarpack2t64:arm64.
164s Preparing to unpack .../016-libarpack2t64_3.9.1-1.1ubuntu1_arm64.deb ...
164s Unpacking libarpack2t64:arm64 (3.9.1-1.1ubuntu1) ...
164s Selecting previously unselected package libarmadillo14.
164s Preparing to unpack .../017-libarmadillo14_1%3a14.0.1+dfsg-2build1_arm64.deb ...
164s Unpacking libarmadillo14 (1:14.0.1+dfsg-2build1) ...
164s Selecting previously unselected package libsnappy1v5:arm64.
164s Preparing to unpack .../018-libsnappy1v5_1.2.1-1_arm64.deb ...
164s Unpacking libsnappy1v5:arm64 (1.2.1-1) ...
164s Selecting previously unselected package libblosc1:arm64.
164s Preparing to unpack .../019-libblosc1_1.21.5+ds-1build1_arm64.deb ...
164s Unpacking libblosc1:arm64 (1.21.5+ds-1build1) ...
164s Selecting previously unselected package libpixman-1-0:arm64.
164s Preparing to unpack .../020-libpixman-1-0_0.44.0-3_arm64.deb ...
164s Unpacking libpixman-1-0:arm64 (0.44.0-3) ...
164s Selecting previously unselected package libxcb-render0:arm64.
164s Preparing to unpack .../021-libxcb-render0_1.17.0-2_arm64.deb ...
164s Unpacking libxcb-render0:arm64 (1.17.0-2) ...
164s Selecting previously unselected package libxcb-shm0:arm64.
164s Preparing to unpack .../022-libxcb-shm0_1.17.0-2_arm64.deb ...
164s Unpacking libxcb-shm0:arm64 (1.17.0-2) ...
164s Selecting previously unselected package libxrender1:arm64.
164s Preparing to unpack .../023-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ...
164s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ...
164s Selecting previously unselected package libcairo2:arm64.
164s Preparing to unpack .../024-libcairo2_1.18.2-2_arm64.deb ...
164s Unpacking libcairo2:arm64 (1.18.2-2) ...
165s Selecting previously unselected package libcfitsio10t64:arm64.
165s Preparing to unpack .../025-libcfitsio10t64_4.4.1-2_arm64.deb ...
165s Unpacking libcfitsio10t64:arm64 (4.4.1-2) ...
165s Selecting previously unselected package libdatrie1:arm64.
165s Preparing to unpack .../026-libdatrie1_0.2.13-3build1_arm64.deb ...
165s Unpacking libdatrie1:arm64 (0.2.13-3build1) ...
165s Selecting previously unselected package libde265-0:arm64.
165s Preparing to unpack .../027-libde265-0_1.0.15-1build4_arm64.deb ...
165s Unpacking libde265-0:arm64 (1.0.15-1build4) ...
165s Selecting previously unselected package libdeflate0:arm64.
165s Preparing to unpack .../028-libdeflate0_1.22-1_arm64.deb ...
165s Unpacking libdeflate0:arm64 (1.22-1) ...
165s Selecting previously unselected package libfyba0t64:arm64.
165s Preparing to unpack .../029-libfyba0t64_4.1.1-11build1_arm64.deb ...
165s Unpacking libfyba0t64:arm64 (4.1.1-11build1) ...
165s Selecting previously unselected package libminizip1t64:arm64.
165s Preparing to unpack .../030-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ...
165s Unpacking libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
165s Selecting previously unselected package libfreexl1:arm64.
165s Preparing to unpack .../031-libfreexl1_2.0.0-1build2_arm64.deb ...
165s Unpacking libfreexl1:arm64 (2.0.0-1build2) ...
165s Selecting previously unselected package libgeos3.13.0:arm64.
165s Preparing to unpack .../032-libgeos3.13.0_3.13.0-1_arm64.deb ...
165s Unpacking libgeos3.13.0:arm64 (3.13.0-1) ...
165s Selecting previously unselected package libgeos-c1t64:arm64.
165s Preparing to unpack .../033-libgeos-c1t64_3.13.0-1_arm64.deb ...
165s Unpacking libgeos-c1t64:arm64 (3.13.0-1) ...
165s Selecting previously unselected package proj-data.
165s Preparing to unpack .../034-proj-data_9.5.0-1_all.deb ...
165s Unpacking proj-data (9.5.0-1) ...
165s Selecting previously unselected package libjbig0:arm64.
165s Preparing to unpack .../035-libjbig0_2.1-6.1ubuntu2_arm64.deb ...
165s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ...
165s Selecting previously unselected package libjpeg-turbo8:arm64.
165s Preparing to unpack .../036-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ...
165s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
165s Selecting previously unselected package libjpeg8:arm64.
165s Preparing to unpack .../037-libjpeg8_8c-2ubuntu11_arm64.deb ...
165s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
165s Selecting previously unselected package liblerc4:arm64.
165s Preparing to unpack .../038-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ...
165s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
165s Selecting previously unselected package libsharpyuv0:arm64.
165s Preparing to unpack .../039-libsharpyuv0_1.4.0-0.1_arm64.deb ...
165s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ...
165s Selecting previously unselected package libwebp7:arm64.
165s Preparing to unpack .../040-libwebp7_1.4.0-0.1_arm64.deb ...
165s Unpacking libwebp7:arm64 (1.4.0-0.1) ...
165s Selecting previously unselected package libtiff6:arm64.
165s Preparing to unpack .../041-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ...
165s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
165s Selecting previously unselected package libproj25:arm64.
165s Preparing to unpack .../042-libproj25_9.5.0-1_arm64.deb ...
165s Unpacking libproj25:arm64 (9.5.0-1) ...
165s Selecting previously unselected package libgeotiff5:arm64.
165s Preparing to unpack .../043-libgeotiff5_1.7.3-1_arm64.deb ...
165s Unpacking libgeotiff5:arm64 (1.7.3-1) ...
165s Selecting previously unselected package libgif7:arm64.
165s Preparing to unpack .../044-libgif7_5.2.2-1ubuntu1_arm64.deb ...
165s Unpacking libgif7:arm64 (5.2.2-1ubuntu1) ...
165s Selecting previously unselected package libsz2:arm64.
165s Preparing to unpack .../045-libsz2_1.1.3-1_arm64.deb ...
165s Unpacking libsz2:arm64 (1.1.3-1) ...
165s Selecting previously unselected package libhdf4-0-alt:arm64.
166s Preparing to unpack .../046-libhdf4-0-alt_4.3.0-1_arm64.deb ...
166s Unpacking libhdf4-0-alt:arm64 (4.3.0-1) ...
166s Selecting previously unselected package libhdf5-103-1t64:arm64.
166s Preparing to unpack .../047-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ...
166s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ...
166s Selecting previously unselected package libheif-plugin-aomdec:arm64.
166s Preparing to unpack .../048-libheif-plugin-aomdec_1.19.3-1_arm64.deb ...
166s Unpacking libheif-plugin-aomdec:arm64 (1.19.3-1) ...
166s Selecting previously unselected package libheif-plugin-libde265:arm64.
166s Preparing to unpack .../049-libheif-plugin-libde265_1.19.3-1_arm64.deb ...
166s Unpacking libheif-plugin-libde265:arm64 (1.19.3-1) ...
166s Selecting previously unselected package libheif1:arm64.
166s Preparing to unpack .../050-libheif1_1.19.3-1_arm64.deb ...
166s Unpacking libheif1:arm64 (1.19.3-1) ...
166s Selecting previously unselected package liburiparser1:arm64.
166s Preparing to unpack .../051-liburiparser1_0.9.8+dfsg-2_arm64.deb ...
166s Unpacking liburiparser1:arm64 (0.9.8+dfsg-2) ...
166s Selecting previously unselected package libkmlbase1t64:arm64.
166s Preparing to unpack .../052-libkmlbase1t64_1.3.0-12build1_arm64.deb ...
166s Unpacking libkmlbase1t64:arm64 (1.3.0-12build1) ...
166s Selecting previously unselected package libkmldom1t64:arm64.
166s Preparing to unpack .../053-libkmldom1t64_1.3.0-12build1_arm64.deb ...
166s Unpacking libkmldom1t64:arm64 (1.3.0-12build1) ...
166s Selecting previously unselected package libkmlengine1t64:arm64.
166s Preparing to unpack .../054-libkmlengine1t64_1.3.0-12build1_arm64.deb ...
166s Unpacking libkmlengine1t64:arm64 (1.3.0-12build1) ...
166s Selecting previously unselected package mysql-common.
166s Preparing to unpack .../055-mysql-common_5.8+1.1.1_all.deb ...
166s Unpacking mysql-common (5.8+1.1.1) ...
166s Selecting previously unselected package libmysqlclient21:arm64.
166s Preparing to unpack .../056-libmysqlclient21_8.0.40-1_arm64.deb ...
166s Unpacking libmysqlclient21:arm64 (8.0.40-1) ...
166s Selecting previously unselected package libhdf5-hl-100t64:arm64.
166s Preparing to unpack .../057-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_arm64.deb ...
166s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ...
166s Selecting previously unselected package libnetcdf19t64:arm64.
166s Preparing to unpack .../058-libnetcdf19t64_1%3a4.9.2-6ubuntu1_arm64.deb ...
166s Unpacking libnetcdf19t64:arm64 (1:4.9.2-6ubuntu1) ...
166s Selecting previously unselected package libltdl7:arm64.
166s Preparing to unpack .../059-libltdl7_2.4.7-8_arm64.deb ...
166s Unpacking libltdl7:arm64 (2.4.7-8) ...
166s Selecting previously unselected package libodbc2:arm64.
166s Preparing to unpack .../060-libodbc2_2.3.12-1ubuntu1_arm64.deb ...
166s Unpacking libodbc2:arm64 (2.3.12-1ubuntu1) ...
166s Selecting previously unselected package unixodbc-common.
166s Preparing to unpack .../061-unixodbc-common_2.3.12-1ubuntu1_all.deb ...
166s Unpacking unixodbc-common (2.3.12-1ubuntu1) ...
166s Selecting previously unselected package libodbcinst2:arm64.
166s Preparing to unpack .../062-libodbcinst2_2.3.12-1ubuntu1_arm64.deb ...
166s Unpacking libodbcinst2:arm64 (2.3.12-1ubuntu1) ...
166s Selecting previously unselected package libogdi4.1:arm64.
166s Preparing to unpack .../063-libogdi4.1_4.1.1+ds-5_arm64.deb ...
166s Unpacking libogdi4.1:arm64 (4.1.1+ds-5) ...
166s Selecting previously unselected package libopenjp2-7:arm64.
166s Preparing to unpack .../064-libopenjp2-7_2.5.0-2ubuntu1_arm64.deb ...
166s Unpacking libopenjp2-7:arm64 (2.5.0-2ubuntu1) ...
166s Selecting previously unselected package libgpgmepp6t64:arm64.
166s Preparing to unpack .../065-libgpgmepp6t64_1.24.0-2ubuntu1_arm64.deb ...
166s Unpacking libgpgmepp6t64:arm64 (1.24.0-2ubuntu1) ...
166s Selecting previously unselected package liblcms2-2:arm64.
166s Preparing to unpack .../066-liblcms2-2_2.16-2_arm64.deb ...
166s Unpacking liblcms2-2:arm64 (2.16-2) ...
166s Selecting previously unselected package libpoppler140:arm64.
166s Preparing to unpack .../067-libpoppler140_24.08.0-3_arm64.deb ...
166s Unpacking libpoppler140:arm64 (24.08.0-3) ...
166s Selecting previously unselected package libpq5:arm64.
166s Preparing to unpack .../068-libpq5_17.0-1_arm64.deb ...
166s Unpacking libpq5:arm64 (17.0-1) ...
166s Selecting previously unselected package libqhull-r8.0:arm64.
166s Preparing to unpack .../069-libqhull-r8.0_2020.2-6build1_arm64.deb ...
166s Unpacking libqhull-r8.0:arm64 (2020.2-6build1) ...
166s Selecting previously unselected package librttopo1:arm64.
166s Preparing to unpack .../070-librttopo1_1.1.0-3build2_arm64.deb ...
166s Unpacking librttopo1:arm64 (1.1.0-3build2) ...
166s Selecting previously unselected package libspatialite8t64:arm64.
166s Preparing to unpack .../071-libspatialite8t64_5.1.0-3build1_arm64.deb ...
166s Unpacking libspatialite8t64:arm64 (5.1.0-3build1) ...
167s Selecting previously unselected package libxerces-c3.2t64:arm64.
167s Preparing to unpack .../072-libxerces-c3.2t64_3.2.4+debian-1.3_arm64.deb ...
167s Unpacking libxerces-c3.2t64:arm64 (3.2.4+debian-1.3) ...
167s Selecting previously unselected package libgdal35:arm64.
167s Preparing to unpack .../073-libgdal35_3.9.3+dfsg-1build1_arm64.deb ...
167s Unpacking libgdal35:arm64 (3.9.3+dfsg-1build1) ...
167s Selecting previously unselected package libgomp1:arm64.
167s Preparing to unpack .../074-libgomp1_14.2.0-8ubuntu1_arm64.deb ...
167s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ...
167s Selecting previously unselected package libgraphite2-3:arm64.
167s Preparing to unpack .../075-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ...
167s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
167s Selecting previously unselected package libharfbuzz0b:arm64.
167s Preparing to unpack .../076-libharfbuzz0b_10.0.1-1_arm64.deb ...
167s Unpacking libharfbuzz0b:arm64 (10.0.1-1) ...
167s Selecting previously unselected package x11-common.
167s Preparing to unpack .../077-x11-common_1%3a7.7+23ubuntu3_all.deb ...
167s Unpacking x11-common (1:7.7+23ubuntu3) ...
167s Selecting previously unselected package libice6:arm64.
167s Preparing to unpack .../078-libice6_2%3a1.1.1-1_arm64.deb ...
167s Unpacking libice6:arm64 (2:1.1.1-1) ...
167s Selecting previously unselected package libjs-bootstrap.
167s Preparing to unpack .../079-libjs-bootstrap_3.4.1+dfsg-3_all.deb ...
167s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
167s Selecting previously unselected package libjs-popper.js.
167s Preparing to unpack .../080-libjs-popper.js_1.16.1+ds-6_all.deb ...
167s Unpacking libjs-popper.js (1.16.1+ds-6) ...
167s Selecting previously unselected package libjs-bootstrap4.
167s Preparing to unpack .../081-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ...
167s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ...
168s Selecting previously unselected package libjs-d3.
168s Preparing to unpack .../082-libjs-d3_3.5.17-4_all.deb ...
168s Unpacking libjs-d3 (3.5.17-4) ...
168s Selecting previously unselected package libjs-es5-shim.
168s Preparing to unpack .../083-libjs-es5-shim_4.6.7-2_all.deb ...
168s Unpacking libjs-es5-shim (4.6.7-2) ...
168s Selecting previously unselected package libjs-highlight.js.
168s Preparing to unpack .../084-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ...
168s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ...
168s Selecting previously unselected package libjs-jquery.
168s Preparing to unpack .../085-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
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170s Selecting previously unselected package r-cran-littler.
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170s Selecting previously unselected package pandoc-data.
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171s Selecting previously unselected package r-cran-abind.
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171s Selecting previously unselected package r-cran-base64enc.
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171s Selecting previously unselected package r-cran-rlang.
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171s Selecting previously unselected package r-cran-cachem.
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171s Selecting previously unselected package r-cran-digest.
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171s Selecting previously unselected package r-cran-htmltools.
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171s Selecting previously unselected package r-cran-jquerylib.
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171s Selecting previously unselected package r-cran-jsonlite.
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171s Selecting previously unselected package r-cran-cli.
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171s Selecting previously unselected package r-cran-glue.
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171s Selecting previously unselected package r-cran-memoise.
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172s Selecting previously unselected package r-cran-mime.
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172s Selecting previously unselected package r-cran-r6.
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172s Selecting previously unselected package r-cran-rappdirs.
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172s Selecting previously unselected package r-cran-sass.
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172s Selecting previously unselected package r-cran-bslib.
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172s Selecting previously unselected package r-cran-dbi.
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173s Selecting previously unselected package r-cran-fontawesome.
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173s Selecting previously unselected package r-cran-foreign.
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174s Selecting previously unselected package r-cran-gstat.
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174s Selecting previously unselected package r-cran-xfun.
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174s Selecting previously unselected package r-cran-highr.
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174s Selecting previously unselected package r-cran-later.
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174s Selecting previously unselected package r-cran-promises.
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174s Selecting previously unselected package r-cran-httpuv.
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174s Selecting previously unselected package r-cran-isocodes.
174s Preparing to unpack .../177-r-cran-isocodes_2024.02.12-1_all.deb ...
174s Unpacking r-cran-isocodes (2024.02.12-1) ...
174s Selecting previously unselected package r-cran-yaml.
174s Preparing to unpack .../178-r-cran-yaml_2.3.10-1_arm64.deb ...
174s Unpacking r-cran-yaml (2.3.10-1) ...
174s Selecting previously unselected package libjs-mathjax.
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174s Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
175s Selecting previously unselected package r-cran-knitr.
175s Preparing to unpack .../180-r-cran-knitr_1.48+dfsg-1_all.deb ...
175s Unpacking r-cran-knitr (1.48+dfsg-1) ...
175s Selecting previously unselected package r-cran-lmtest.
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175s Unpacking r-cran-lmtest (0.9.40-1) ...
175s Selecting previously unselected package r-cran-maps.
175s Preparing to unpack .../182-r-cran-maps_3.4.2-1_arm64.deb ...
175s Unpacking r-cran-maps (3.4.2-1) ...
175s Selecting previously unselected package r-cran-mapdata.
175s Preparing to unpack .../183-r-cran-mapdata_2.3.1-1_arm64.deb ...
175s Unpacking r-cran-mapdata (2.3.1-1) ...
175s Selecting previously unselected package r-cran-markdown.
175s Preparing to unpack .../184-r-cran-markdown_1.12+dfsg-2_all.deb ...
175s Unpacking r-cran-markdown (1.12+dfsg-2) ...
175s Selecting previously unselected package r-cran-misctools.
175s Preparing to unpack .../185-r-cran-misctools_0.6-28-1_all.deb ...
175s Unpacking r-cran-misctools (0.6-28-1) ...
175s Selecting previously unselected package r-cran-sandwich.
175s Preparing to unpack .../186-r-cran-sandwich_3.1-1-1_all.deb ...
175s Unpacking r-cran-sandwich (3.1-1-1) ...
175s Selecting previously unselected package r-cran-maxlik.
175s Preparing to unpack .../187-r-cran-maxlik_1.5-2.1-1_all.deb ...
175s Unpacking r-cran-maxlik (1.5-2.1-1) ...
175s Selecting previously unselected package r-cran-nlme.
175s Preparing to unpack .../188-r-cran-nlme_3.1.166-1_arm64.deb ...
175s Unpacking r-cran-nlme (3.1.166-1) ...
175s Selecting previously unselected package r-cran-rbibutils.
176s Preparing to unpack .../189-r-cran-rbibutils_2.3-1_arm64.deb ...
176s Unpacking r-cran-rbibutils (2.3-1) ...
176s Selecting previously unselected package r-cran-rdpack.
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192s (Reading database ... 96772 files and directories currently installed.)
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193s autopkgtest [20:43:51]: test run-unit-test: [-----------------------
193s BEGIN TEST basic.R
193s 
193s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
193s Copyright (C) 2024 The R Foundation for Statistical Computing
193s Platform: aarch64-unknown-linux-gnu
193s 
193s R is free software and comes with ABSOLUTELY NO WARRANTY.
193s You are welcome to redistribute it under certain conditions.
193s Type 'license()' or 'licence()' for distribution details.
193s 
193s R is a collaborative project with many contributors.
193s Type 'contributors()' for more information and
193s 'citation()' on how to cite R or R packages in publications.
193s 
193s Type 'demo()' for some demos, 'help()' for on-line help, or
193s 'help.start()' for an HTML browser interface to help.
193s Type 'q()' to quit R.
193s 
194s > options(digits=5)
194s > options(xts_check_TZ=FALSE)
194s > ###################################################
194s > ### chunk number 4: 
194s > ###################################################
194s > library(sp)
194s > library(spacetime)
194s > set.seed(13579) # to make outcome a bit predictable!
194s > sp = cbind(x = c(0,0,1), y = c(0,1,1))
194s > row.names(sp) = paste("point", 1:nrow(sp), sep="")
194s > sp = SpatialPoints(sp)
194s > time = as.POSIXct("2010-08-05", tz="GMT")+3600*(10:13)
194s > m = c(10,20,30) # means for each of the 3 point locations
194s > mydata = rnorm(length(sp)*length(time),mean=rep(m, 4))
194s > IDs = paste("ID", 1:length(mydata), sep = "_")
194s > mydata = data.frame(values = signif(mydata,3), ID=IDs)
194s > stfdf = STFDF(sp, time, mydata)
194s > 
194s > 
194s > ###################################################
194s > ### chunk number 5: 
194s > ###################################################
194s > format(as.data.frame(stfdf, row.names = IDs), tz="GMT")
194s       x y  sp.ID                time             endTime timeIndex values    ID
194s ID_1  0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77  ID_1
194s ID_2  0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70  ID_2
194s ID_3  1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70  ID_3
194s ID_4  0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47  ID_4
194s ID_5  0 1 point2 2010-08-05 11:00:00 2010-08-05 12:00:00         2  21.10  ID_5
194s ID_6  1 1 point3 2010-08-05 11:00:00 2010-08-05 12:00:00         2  32.50  ID_6
194s ID_7  0 0 point1 2010-08-05 12:00:00 2010-08-05 13:00:00         3  10.80  ID_7
194s ID_8  0 1 point2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  20.20  ID_8
194s ID_9  1 1 point3 2010-08-05 12:00:00 2010-08-05 13:00:00         3  29.00  ID_9
194s ID_10 0 0 point1 2010-08-05 13:00:00 2010-08-05 14:00:00         4   9.74 ID_10
194s ID_11 0 1 point2 2010-08-05 13:00:00 2010-08-05 14:00:00         4  20.70 ID_11
194s ID_12 1 1 point3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  30.50 ID_12
194s > format(as(stfdf, "data.frame")[1:4,], tz="GMT")
194s   x y  sp.ID                time             endTime timeIndex values   ID
194s 1 0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77 ID_1
194s 2 0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70 ID_2
194s 3 1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70 ID_3
194s 4 0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47 ID_4
194s > 
194s > ###################################################
194s > ### chunk number 6: 
194s > ###################################################
194s > unstack(stfdf)
194s                     point1 point2 point3
194s 2010-08-05 10:00:00   8.77   18.7   29.7
194s 2010-08-05 11:00:00   8.47   21.1   32.5
194s 2010-08-05 12:00:00  10.80   20.2   29.0
194s 2010-08-05 13:00:00   9.74   20.7   30.5
194s > t(unstack(stfdf))
194s        2010-08-05 10:00:00 2010-08-05 11:00:00 2010-08-05 12:00:00
194s point1                8.77                8.47                10.8
194s point2               18.70               21.10                20.2
194s point3               29.70               32.50                29.0
194s        2010-08-05 13:00:00
194s point1                9.74
194s point2               20.70
194s point3               30.50
194s > unstack(stfdf, which = 2)
194s                     point1 point2 point3
194s 2010-08-05 10:00:00   ID_1   ID_2   ID_3
194s 2010-08-05 11:00:00   ID_4   ID_5   ID_6
194s 2010-08-05 12:00:00   ID_7   ID_8   ID_9
194s 2010-08-05 13:00:00  ID_10  ID_11  ID_12
194s > 
194s > ###################################################
194s > ### chunk number 7: 
194s > ###################################################
194s > as(stfdf[,,1], "xts")
194s                     point1 point2 point3
194s 2010-08-05 10:00:00   8.77   18.7   29.7
194s 2010-08-05 11:00:00   8.47   21.1   32.5
194s 2010-08-05 12:00:00  10.80   20.2   29.0
194s 2010-08-05 13:00:00   9.74   20.7   30.5
194s > as(stfdf[,,2], "xts")
194s                     point1 point2 point3
194s 2010-08-05 10:00:00   ID_1   ID_2   ID_3
194s 2010-08-05 11:00:00   ID_4   ID_5   ID_6
194s 2010-08-05 12:00:00   ID_7   ID_8   ID_9
194s 2010-08-05 13:00:00  ID_10  ID_11  ID_12
194s > 
194s > ###################################################
194s > ### chunk number 8: 
194s > ###################################################
194s > stfdf[[1]]
194s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
194s > stfdf[["values"]]
194s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
194s > stfdf[["newVal"]] <- rnorm(12)
194s > stfdf$ID
194s  [1] "ID_1"  "ID_2"  "ID_3"  "ID_4"  "ID_5"  "ID_6"  "ID_7"  "ID_8"  "ID_9" 
194s [10] "ID_10" "ID_11" "ID_12"
194s > stfdf$ID = paste("OldIDs", 1:12, sep="")
194s > stfdf$NewID = paste("NewIDs", 12:1, sep="")
194s > stfdf
194s An object of class "STFDF"
194s Slot "data":
194s    values       ID    newVal    NewID
194s 1    8.77  OldIDs1 -0.766670 NewIDs12
194s 2   18.70  OldIDs2 -0.437290 NewIDs11
194s 3   29.70  OldIDs3 -0.471551 NewIDs10
194s 4    8.47  OldIDs4 -0.561384  NewIDs9
194s 5   21.10  OldIDs5 -1.215165  NewIDs8
194s 6   32.50  OldIDs6  0.246818  NewIDs7
194s 7   10.80  OldIDs7 -0.861698  NewIDs6
194s 8   20.20  OldIDs8  0.659911  NewIDs5
194s 9   29.00  OldIDs9 -0.036842  NewIDs4
194s 10   9.74 OldIDs10 -0.952524  NewIDs3
194s 11  20.70 OldIDs11 -1.699710  NewIDs2
194s 12  30.50 OldIDs12  0.899851  NewIDs1
194s 
194s Slot "sp":
194s SpatialPoints:
194s        x y
194s point1 0 0
194s point2 0 1
194s point3 1 1
194s Coordinate Reference System (CRS) arguments: NA 
194s 
194s Slot "time":
194s                     timeIndex
194s 2010-08-05 10:00:00         1
194s 2010-08-05 11:00:00         2
194s 2010-08-05 12:00:00         3
194s 2010-08-05 13:00:00         4
194s 
194s Slot "endTime":
194s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
194s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
194s 
194s > 
194s > 
194s > ###################################################
194s > ### chunk number 9: 
194s > ###################################################
194s > stfdf[,1] # SpatialPointsDataFrame:
194s   coordinates values      ID   newVal    NewID
194s 1      (0, 0)   8.77 OldIDs1 -0.76667 NewIDs12
194s 2      (0, 1)  18.70 OldIDs2 -0.43729 NewIDs11
194s 3      (1, 1)  29.70 OldIDs3 -0.47155 NewIDs10
194s > stfdf[,,1]
194s An object of class "STFDF"
194s Slot "data":
194s    values
194s 1    8.77
194s 2   18.70
194s 3   29.70
194s 4    8.47
194s 5   21.10
194s 6   32.50
194s 7   10.80
194s 8   20.20
194s 9   29.00
194s 10   9.74
194s 11  20.70
194s 12  30.50
194s 
194s Slot "sp":
194s SpatialPoints:
194s        x y
194s point1 0 0
194s point2 0 1
194s point3 1 1
194s Coordinate Reference System (CRS) arguments: NA 
194s 
194s Slot "time":
194s                     timeIndex
194s 2010-08-05 10:00:00         1
194s 2010-08-05 11:00:00         2
194s 2010-08-05 12:00:00         3
194s 2010-08-05 13:00:00         4
194s 
194s Slot "endTime":
194s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
194s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
194s 
194s > stfdf[1,,1] # xts
194s                     values timeIndex
194s 2010-08-05 10:00:00   8.77         1
194s 2010-08-05 11:00:00   8.47         2
194s 2010-08-05 12:00:00  10.80         3
194s 2010-08-05 13:00:00   9.74         4
194s > stfdf[,,"ID"]
194s An object of class "STFDF"
194s Slot "data":
194s          ID
194s 1   OldIDs1
194s 2   OldIDs2
194s 3   OldIDs3
194s 4   OldIDs4
194s 5   OldIDs5
194s 6   OldIDs6
194s 7   OldIDs7
194s 8   OldIDs8
194s 9   OldIDs9
194s 10 OldIDs10
194s 11 OldIDs11
194s 12 OldIDs12
194s 
194s Slot "sp":
194s SpatialPoints:
194s        x y
194s point1 0 0
194s point2 0 1
194s point3 1 1
194s Coordinate Reference System (CRS) arguments: NA 
194s 
194s Slot "time":
194s                     timeIndex
194s 2010-08-05 10:00:00         1
194s 2010-08-05 11:00:00         2
194s 2010-08-05 12:00:00         3
194s 2010-08-05 13:00:00         4
194s 
194s Slot "endTime":
194s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
194s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
194s 
194s > stfdf[1,,"values", drop=FALSE] # stays STFDF:
194s An object of class "STFDF"
194s Slot "data":
194s   values
194s 1   8.77
194s 2   8.47
194s 3  10.80
194s 4   9.74
194s 
194s Slot "sp":
194s SpatialPoints:
194s        x y
194s point1 0 0
194s Coordinate Reference System (CRS) arguments: NA 
194s 
194s Slot "time":
194s                     timeIndex
194s 2010-08-05 10:00:00         1
194s 2010-08-05 11:00:00         2
194s 2010-08-05 12:00:00         3
194s 2010-08-05 13:00:00         4
194s 
194s Slot "endTime":
194s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
194s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
194s 
194s > stfdf[,1, drop=FALSE] #stays STFDF
194s An object of class "STFDF"
194s Slot "data":
194s   values      ID   newVal    NewID
194s 1   8.77 OldIDs1 -0.76667 NewIDs12
194s 2  18.70 OldIDs2 -0.43729 NewIDs11
194s 3  29.70 OldIDs3 -0.47155 NewIDs10
194s 
194s Slot "sp":
194s SpatialPoints:
194s        x y
194s point1 0 0
194s point2 0 1
194s point3 1 1
194s Coordinate Reference System (CRS) arguments: NA 
194s 
194s Slot "time":
194s                     timeIndex
194s 2010-08-05 10:00:00         1
194s 
194s Slot "endTime":
194s [1] "2010-08-05 11:00:00 GMT"
194s 
194s > 
194s > ###################################################
194s > ### chunk number 10: 
194s > ###################################################
194s > showClass("STSDF")
194s Class "STSDF" [package "spacetime"]
194s 
194s Slots:
194s                                                              
194s Name:        data      index         sp       time    endTime
194s Class: data.frame     matrix    Spatial        xts    POSIXct
194s 
194s Extends: 
194s Class "STS", directly
194s Class "ST", by class "STS", distance 2
194s > 
194s > ###################################################
194s > ### chunk number 11: 
194s > ###################################################
194s > showClass("STIDF")
194s Class "STIDF" [package "spacetime"]
194s 
194s Slots:
194s                                                   
194s Name:        data         sp       time    endTime
194s Class: data.frame    Spatial        xts    POSIXct
194s 
194s Extends: 
194s Class "STI", directly
194s Class "ST", by class "STI", distance 2
194s > sp = expand.grid(x = 1:3, y = 1:3)
194s > row.names(sp) = paste("point", 1:nrow(sp), sep="")
194s > sp = SpatialPoints(sp)
194s > time = as.POSIXct("2010-08-05", tz="GMT")+3600*(11:19)
194s > m = 1:9 * 10 # means for each of the 9 point locations
194s > mydata = rnorm(length(sp), mean=m)
194s > IDs = paste("ID",1:length(mydata))
194s > mydata = data.frame(values = signif(mydata,3),ID=IDs)
194s > stidf = STIDF(sp, time, mydata)
194s > stidf
194s An object of class "STIDF"
194s Slot "data":
194s   values   ID
194s 1   10.7 ID 1
194s 2   19.8 ID 2
194s 3   29.2 ID 3
194s 4   41.8 ID 4
194s 5   50.2 ID 5
194s 6   59.9 ID 6
194s 7   70.9 ID 7
194s 8   80.0 ID 8
194s 9   90.2 ID 9
194s 
194s Slot "sp":
194s SpatialPoints:
194s        x y
194s point1 1 1
194s point2 2 1
194s point3 3 1
194s point4 1 2
194s point5 2 2
194s point6 3 2
194s point7 1 3
194s point8 2 3
194s point9 3 3
194s Coordinate Reference System (CRS) arguments: NA 
194s 
194s Slot "time":
194s                     timeIndex
194s 2010-08-05 11:00:00         1
194s 2010-08-05 12:00:00         2
194s 2010-08-05 13:00:00         3
194s 2010-08-05 14:00:00         4
194s 2010-08-05 15:00:00         5
194s 2010-08-05 16:00:00         6
194s 2010-08-05 17:00:00         7
194s 2010-08-05 18:00:00         8
194s 2010-08-05 19:00:00         9
194s 
194s Slot "endTime":
194s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
194s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
194s [5] "2010-08-05 15:00:00 GMT" "2010-08-05 16:00:00 GMT"
194s [7] "2010-08-05 17:00:00 GMT" "2010-08-05 18:00:00 GMT"
194s [9] "2010-08-05 19:00:00 GMT"
194s 
194s > 
194s > 
194s > ###################################################
194s > ### chunk number 12: 
194s > ###################################################
194s > stidf[1:2,]
194s An object of class "STIDF"
194s Slot "data":
194s   values   ID
194s 1   10.7 ID 1
194s 2   19.8 ID 2
194s 
194s Slot "sp":
194s SpatialPoints:
194s        x y
194s point1 1 1
194s point2 2 1
194s Coordinate Reference System (CRS) arguments: NA 
194s 
194s Slot "time":
194s                     timeIndex
194s 2010-08-05 11:00:00         1
194s 2010-08-05 12:00:00         2
194s 
194s Slot "endTime":
194s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
194s 
194s > 
194s > 
194s > ###################################################
194s > ### chunk number 13: 
194s > ###################################################
194s > stfdf[,time[3]]
194s   coordinates values       ID   newVal   NewID
194s 1      (0, 0)   9.74 OldIDs10 -0.95252 NewIDs3
194s 2      (0, 1)  20.70 OldIDs11 -1.69971 NewIDs2
194s 3      (1, 1)  30.50 OldIDs12  0.89985 NewIDs1
194s > 
194s > 
194s > ###################################################
194s > ### chunk number 14: 
194s > ###################################################
194s > class(stfdf[,time[3],drop=FALSE])
194s [1] "STFDF"
194s attr(,"package")
194s [1] "spacetime"
194s > 
194s > ###################################################
194s > ### chunk number 15: 
194s > ###################################################
194s > stfdf[1, , "values"]
194s                     values timeIndex
194s 2010-08-05 10:00:00   8.77         1
194s 2010-08-05 11:00:00   8.47         2
194s 2010-08-05 12:00:00  10.80         3
194s 2010-08-05 13:00:00   9.74         4
194s > 
194s > ###################################################
194s > ### chunk number 16: 
194s > ###################################################
194s > class(stfdf[1,drop=FALSE])
194s [1] "STFDF"
194s attr(,"package")
194s [1] "spacetime"
194s > 
194s > 
194s > ###################################################
194s > ### chunk number 17: 
194s > ###################################################
194s > class(stfdf)
194s [1] "STFDF"
194s attr(,"package")
194s [1] "spacetime"
194s > class(as(stfdf, "STSDF"))
194s [1] "STSDF"
194s attr(,"package")
194s [1] "spacetime"
194s > class(as(as(stfdf, "STSDF"), "STIDF"))
194s [1] "STIDF"
194s attr(,"package")
194s [1] "spacetime"
194s > class(as(stfdf, "STIDF"))
194s [1] "STIDF"
194s attr(,"package")
194s [1] "spacetime"
194s > 
194s > 
194s > ###################################################
194s > ### chunk number 18: 
194s > ###################################################
194s > x = as(stfdf, "STIDF")
194s > class(as(x, "STSDF"))
194s [1] "STSDF"
194s attr(,"package")
194s [1] "spacetime"
194s > class(as(as(x, "STSDF"), "STFDF"))
194s [1] "STFDF"
194s attr(,"package")
194s [1] "spacetime"
194s > class(as(x, "STFDF"))
194s [1] "STFDF"
194s attr(,"package")
194s [1] "spacetime"
194s > xx = as(x, "STFDF")
194s > identical(stfdf, xx)
194s [1] TRUE
194s > 
194s > stsdf = as(stfdf, "STSDF")
195s > stsdf[[1]]
195s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
195s > stsdf[["values"]]
195s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
195s > stsdf[["newVal"]] <- rnorm(12)
195s > stsdf$ID
195s  [1] "OldIDs1"  "OldIDs2"  "OldIDs3"  "OldIDs4"  "OldIDs5"  "OldIDs6" 
195s  [7] "OldIDs7"  "OldIDs8"  "OldIDs9"  "OldIDs10" "OldIDs11" "OldIDs12"
195s > stsdf$ID = paste("OldIDs", 1:12, sep="")
195s > stsdf$NewID = paste("NewIDs", 12:1, sep="")
195s > stsdf
195s An object of class "STSDF"
195s Slot "data":
195s    values       ID   newVal    NewID
195s 1    8.77  OldIDs1 -1.24345 NewIDs12
195s 2   18.70  OldIDs2 -1.47698 NewIDs11
195s 3   29.70  OldIDs3 -0.84284 NewIDs10
195s 4    8.47  OldIDs4  1.54992  NewIDs9
195s 5   21.10  OldIDs5  1.04955  NewIDs8
195s 6   32.50  OldIDs6  1.35744  NewIDs7
195s 7   10.80  OldIDs7  1.33925  NewIDs6
195s 8   20.20  OldIDs8  0.77757  NewIDs5
195s 9   29.00  OldIDs9  0.39454  NewIDs4
195s 10   9.74 OldIDs10  0.15138  NewIDs3
195s 11  20.70 OldIDs11 -0.38780  NewIDs2
195s 12  30.50 OldIDs12  0.46815  NewIDs1
195s 
195s Slot "index":
195s       [,1] [,2]
195s  [1,]    1    1
195s  [2,]    2    1
195s  [3,]    3    1
195s  [4,]    1    2
195s  [5,]    2    2
195s  [6,]    3    2
195s  [7,]    1    3
195s  [8,]    2    3
195s  [9,]    3    3
195s [10,]    1    4
195s [11,]    2    4
195s [12,]    3    4
195s 
195s Slot "sp":
195s SpatialPoints:
195s        x y
195s point1 0 0
195s point2 0 1
195s point3 1 1
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 2010-08-05 11:00:00         2
195s 2010-08-05 12:00:00         3
195s 2010-08-05 13:00:00         4
195s 
195s Slot "endTime":
195s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
195s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
195s 
195s > stsdf[,1] # SpatialPointsDataFrame:
195s   coordinates values      ID   newVal    NewID
195s 1      (0, 0)   8.77 OldIDs1 -1.24345 NewIDs12
195s 2      (0, 1)  18.70 OldIDs2 -1.47698 NewIDs11
195s 3      (1, 1)  29.70 OldIDs3 -0.84284 NewIDs10
195s > stsdf[,,1]
195s An object of class "STSDF"
195s Slot "data":
195s    values
195s 1    8.77
195s 2   18.70
195s 3   29.70
195s 4    8.47
195s 5   21.10
195s 6   32.50
195s 7   10.80
195s 8   20.20
195s 9   29.00
195s 10   9.74
195s 11  20.70
195s 12  30.50
195s 
195s Slot "index":
195s       [,1] [,2]
195s  [1,]    1    1
195s  [2,]    2    1
195s  [3,]    3    1
195s  [4,]    1    2
195s  [5,]    2    2
195s  [6,]    3    2
195s  [7,]    1    3
195s  [8,]    2    3
195s  [9,]    3    3
195s [10,]    1    4
195s [11,]    2    4
195s [12,]    3    4
195s 
195s Slot "sp":
195s SpatialPoints:
195s        x y
195s point1 0 0
195s point2 0 1
195s point3 1 1
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 2010-08-05 11:00:00         2
195s 2010-08-05 12:00:00         3
195s 2010-08-05 13:00:00         4
195s 
195s Slot "endTime":
195s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
195s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
195s 
195s > stsdf[1,,1] # xts
195s                     values timeIndex
195s 2010-08-05 10:00:00   8.77         1
195s 2010-08-05 11:00:00   8.47         2
195s 2010-08-05 12:00:00  10.80         3
195s 2010-08-05 13:00:00   9.74         4
195s > stsdf[,,"ID"]
195s An object of class "STSDF"
195s Slot "data":
195s          ID
195s 1   OldIDs1
195s 2   OldIDs2
195s 3   OldIDs3
195s 4   OldIDs4
195s 5   OldIDs5
195s 6   OldIDs6
195s 7   OldIDs7
195s 8   OldIDs8
195s 9   OldIDs9
195s 10 OldIDs10
195s 11 OldIDs11
195s 12 OldIDs12
195s 
195s Slot "index":
195s       [,1] [,2]
195s  [1,]    1    1
195s  [2,]    2    1
195s  [3,]    3    1
195s  [4,]    1    2
195s  [5,]    2    2
195s  [6,]    3    2
195s  [7,]    1    3
195s  [8,]    2    3
195s  [9,]    3    3
195s [10,]    1    4
195s [11,]    2    4
195s [12,]    3    4
195s 
195s Slot "sp":
195s SpatialPoints:
195s        x y
195s point1 0 0
195s point2 0 1
195s point3 1 1
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 2010-08-05 11:00:00         2
195s 2010-08-05 12:00:00         3
195s 2010-08-05 13:00:00         4
195s 
195s Slot "endTime":
195s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
195s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
195s 
195s > stsdf[1,,"values", drop=FALSE] # stays STIDF:
195s An object of class "STSDF"
195s Slot "data":
195s    values
195s 1    8.77
195s 4    8.47
195s 7   10.80
195s 10   9.74
195s 
195s Slot "index":
195s      [,1] [,2]
195s [1,]    1    1
195s [2,]    1    2
195s [3,]    1    3
195s [4,]    1    4
195s 
195s Slot "sp":
195s SpatialPoints:
195s        x y
195s point1 0 0
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 2010-08-05 11:00:00         2
195s 2010-08-05 12:00:00         3
195s 2010-08-05 13:00:00         4
195s 
195s Slot "endTime":
195s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
195s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
195s 
195s > stsdf[,1, drop=FALSE] #stays STIDF
195s An object of class "STSDF"
195s Slot "data":
195s   values      ID   newVal    NewID
195s 1   8.77 OldIDs1 -1.24345 NewIDs12
195s 2  18.70 OldIDs2 -1.47698 NewIDs11
195s 3  29.70 OldIDs3 -0.84284 NewIDs10
195s 
195s Slot "index":
195s      [,1] [,2]
195s [1,]    1    1
195s [2,]    2    1
195s [3,]    3    1
195s 
195s Slot "sp":
195s SpatialPoints:
195s        x y
195s point1 0 0
195s point2 0 1
195s point3 1 1
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 
195s Slot "endTime":
195s [1] "2010-08-05 11:00:00 GMT"
195s 
195s > format(as.data.frame(stsdf), tz="GMT")
195s    x y  sp.ID                time             endTime timeIndex values       ID
195s 1  0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77  OldIDs1
195s 2  0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70  OldIDs2
195s 3  1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70  OldIDs3
195s 4  0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47  OldIDs4
195s 5  0 1 point2 2010-08-05 11:00:00 2010-08-05 12:00:00         2  21.10  OldIDs5
195s 6  1 1 point3 2010-08-05 11:00:00 2010-08-05 12:00:00         2  32.50  OldIDs6
195s 7  0 0 point1 2010-08-05 12:00:00 2010-08-05 13:00:00         3  10.80  OldIDs7
195s 8  0 1 point2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  20.20  OldIDs8
195s 9  1 1 point3 2010-08-05 12:00:00 2010-08-05 13:00:00         3  29.00  OldIDs9
195s 10 0 0 point1 2010-08-05 13:00:00 2010-08-05 14:00:00         4   9.74 OldIDs10
195s 11 0 1 point2 2010-08-05 13:00:00 2010-08-05 14:00:00         4  20.70 OldIDs11
195s 12 1 1 point3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  30.50 OldIDs12
195s      newVal    NewID
195s 1  -1.24345 NewIDs12
195s 2  -1.47698 NewIDs11
195s 3  -0.84284 NewIDs10
195s 4   1.54992  NewIDs9
195s 5   1.04955  NewIDs8
195s 6   1.35744  NewIDs7
195s 7   1.33925  NewIDs6
195s 8   0.77757  NewIDs5
195s 9   0.39454  NewIDs4
195s 10  0.15138  NewIDs3
195s 11 -0.38780  NewIDs2
195s 12  0.46815  NewIDs1
195s > format(as(stsdf, "data.frame"), tz="GMT")
195s    x y  sp.ID                time             endTime timeIndex values       ID
195s 1  0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77  OldIDs1
195s 2  0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70  OldIDs2
195s 3  1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70  OldIDs3
195s 4  0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47  OldIDs4
195s 5  0 1 point2 2010-08-05 11:00:00 2010-08-05 12:00:00         2  21.10  OldIDs5
195s 6  1 1 point3 2010-08-05 11:00:00 2010-08-05 12:00:00         2  32.50  OldIDs6
195s 7  0 0 point1 2010-08-05 12:00:00 2010-08-05 13:00:00         3  10.80  OldIDs7
195s 8  0 1 point2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  20.20  OldIDs8
195s 9  1 1 point3 2010-08-05 12:00:00 2010-08-05 13:00:00         3  29.00  OldIDs9
195s 10 0 0 point1 2010-08-05 13:00:00 2010-08-05 14:00:00         4   9.74 OldIDs10
195s 11 0 1 point2 2010-08-05 13:00:00 2010-08-05 14:00:00         4  20.70 OldIDs11
195s 12 1 1 point3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  30.50 OldIDs12
195s      newVal    NewID
195s 1  -1.24345 NewIDs12
195s 2  -1.47698 NewIDs11
195s 3  -0.84284 NewIDs10
195s 4   1.54992  NewIDs9
195s 5   1.04955  NewIDs8
195s 6   1.35744  NewIDs7
195s 7   1.33925  NewIDs6
195s 8   0.77757  NewIDs5
195s 9   0.39454  NewIDs4
195s 10  0.15138  NewIDs3
195s 11 -0.38780  NewIDs2
195s 12  0.46815  NewIDs1
195s > 
195s > stidf = as(stfdf, "STIDF")
195s > stidf[[1]]
195s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
195s > stidf[["values"]]
195s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
195s > stidf[["newVal"]] <- rnorm(12)
195s > stidf$ID
195s  [1] "OldIDs1"  "OldIDs2"  "OldIDs3"  "OldIDs4"  "OldIDs5"  "OldIDs6" 
195s  [7] "OldIDs7"  "OldIDs8"  "OldIDs9"  "OldIDs10" "OldIDs11" "OldIDs12"
195s > stidf$ID = paste("OldIDs", 1:12, sep="")
195s > stidf$NewID = paste("NewIDs", 12:1, sep="")
195s > stidf
195s An object of class "STIDF"
195s Slot "data":
195s    values       ID   newVal    NewID
195s 1    8.77  OldIDs1  1.67415 NewIDs12
195s 2   18.70  OldIDs2 -1.47819 NewIDs11
195s 3   29.70  OldIDs3 -1.63290 NewIDs10
195s 4    8.47  OldIDs4 -0.97491  NewIDs9
195s 5   21.10  OldIDs5 -0.76499  NewIDs8
195s 6   32.50  OldIDs6  0.10300  NewIDs7
195s 7   10.80  OldIDs7 -1.06830  NewIDs6
195s 8   20.20  OldIDs8  0.47947  NewIDs5
195s 9   29.00  OldIDs9  1.17482  NewIDs4
195s 10   9.74 OldIDs10  1.03354  NewIDs3
195s 11  20.70 OldIDs11  0.82826  NewIDs2
195s 12  30.50 OldIDs12 -0.75862  NewIDs1
195s 
195s Slot "sp":
195s SpatialPoints:
195s          x y
195s point1   0 0
195s point2   0 1
195s point3   1 1
195s point1.1 0 0
195s point2.1 0 1
195s point3.1 1 1
195s point1.2 0 0
195s point2.2 0 1
195s point3.2 1 1
195s point1.3 0 0
195s point2.3 0 1
195s point3.3 1 1
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 2010-08-05 10:00:00         1
195s 2010-08-05 10:00:00         1
195s 2010-08-05 11:00:00         2
195s 2010-08-05 11:00:00         2
195s 2010-08-05 11:00:00         2
195s 2010-08-05 12:00:00         3
195s 2010-08-05 12:00:00         3
195s 2010-08-05 12:00:00         3
195s 2010-08-05 13:00:00         4
195s 2010-08-05 13:00:00         4
195s 2010-08-05 13:00:00         4
195s 
195s Slot "endTime":
195s  [1] "2010-08-05 11:00:00 GMT" "2010-08-05 11:00:00 GMT"
195s  [3] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
195s  [5] "2010-08-05 12:00:00 GMT" "2010-08-05 12:00:00 GMT"
195s  [7] "2010-08-05 13:00:00 GMT" "2010-08-05 13:00:00 GMT"
195s  [9] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
195s [11] "2010-08-05 14:00:00 GMT" "2010-08-05 14:00:00 GMT"
195s 
195s > stidf[,1] # SpatialPointsDataFrame:
195s An object of class "STIDF"
195s Slot "data":
195s   values      ID newVal    NewID
195s 1   8.77 OldIDs1 1.6741 NewIDs12
195s 
195s Slot "sp":
195s SpatialPoints:
195s        x y
195s point1 0 0
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 
195s Slot "endTime":
195s [1] "2010-08-05 11:00:00 GMT"
195s 
195s > stidf[,,1]
195s An object of class "STIDF"
195s Slot "data":
195s    values
195s 1    8.77
195s 2   18.70
195s 3   29.70
195s 4    8.47
195s 5   21.10
195s 6   32.50
195s 7   10.80
195s 8   20.20
195s 9   29.00
195s 10   9.74
195s 11  20.70
195s 12  30.50
195s 
195s Slot "sp":
195s SpatialPoints:
195s          x y
195s point1   0 0
195s point2   0 1
195s point3   1 1
195s point1.1 0 0
195s point2.1 0 1
195s point3.1 1 1
195s point1.2 0 0
195s point2.2 0 1
195s point3.2 1 1
195s point1.3 0 0
195s point2.3 0 1
195s point3.3 1 1
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 2010-08-05 10:00:00         1
195s 2010-08-05 10:00:00         1
195s 2010-08-05 11:00:00         2
195s 2010-08-05 11:00:00         2
195s 2010-08-05 11:00:00         2
195s 2010-08-05 12:00:00         3
195s 2010-08-05 12:00:00         3
195s 2010-08-05 12:00:00         3
195s 2010-08-05 13:00:00         4
195s 2010-08-05 13:00:00         4
195s 2010-08-05 13:00:00         4
195s 
195s Slot "endTime":
195s  [1] "2010-08-05 11:00:00 GMT" "2010-08-05 11:00:00 GMT"
195s  [3] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
195s  [5] "2010-08-05 12:00:00 GMT" "2010-08-05 12:00:00 GMT"
195s  [7] "2010-08-05 13:00:00 GMT" "2010-08-05 13:00:00 GMT"
195s  [9] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
195s [11] "2010-08-05 14:00:00 GMT" "2010-08-05 14:00:00 GMT"
195s 
195s > stidf[1,,1] # xts
195s An object of class "STIDF"
195s Slot "data":
195s   values
195s 1   8.77
195s 
195s Slot "sp":
195s SpatialPoints:
195s        x y
195s point1 0 0
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 
195s Slot "endTime":
195s [1] "2010-08-05 11:00:00 GMT"
195s 
195s > stidf[,,"ID"]
195s An object of class "STIDF"
195s Slot "data":
195s          ID
195s 1   OldIDs1
195s 2   OldIDs2
195s 3   OldIDs3
195s 4   OldIDs4
195s 5   OldIDs5
195s 6   OldIDs6
195s 7   OldIDs7
195s 8   OldIDs8
195s 9   OldIDs9
195s 10 OldIDs10
195s 11 OldIDs11
195s 12 OldIDs12
195s 
195s Slot "sp":
195s SpatialPoints:
195s          x y
195s point1   0 0
195s point2   0 1
195s point3   1 1
195s point1.1 0 0
195s point2.1 0 1
195s point3.1 1 1
195s point1.2 0 0
195s point2.2 0 1
195s point3.2 1 1
195s point1.3 0 0
195s point2.3 0 1
195s point3.3 1 1
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 2010-08-05 10:00:00         1
195s 2010-08-05 10:00:00         1
195s 2010-08-05 11:00:00         2
195s 2010-08-05 11:00:00         2
195s 2010-08-05 11:00:00         2
195s 2010-08-05 12:00:00         3
195s 2010-08-05 12:00:00         3
195s 2010-08-05 12:00:00         3
195s 2010-08-05 13:00:00         4
195s 2010-08-05 13:00:00         4
195s 2010-08-05 13:00:00         4
195s 
195s Slot "endTime":
195s  [1] "2010-08-05 11:00:00 GMT" "2010-08-05 11:00:00 GMT"
195s  [3] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
195s  [5] "2010-08-05 12:00:00 GMT" "2010-08-05 12:00:00 GMT"
195s  [7] "2010-08-05 13:00:00 GMT" "2010-08-05 13:00:00 GMT"
195s  [9] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
195s [11] "2010-08-05 14:00:00 GMT" "2010-08-05 14:00:00 GMT"
195s 
195s > stidf[1,,"values", drop=FALSE] # stays STIDF:
195s An object of class "STIDF"
195s Slot "data":
195s   values
195s 1   8.77
195s 
195s Slot "sp":
195s SpatialPoints:
195s        x y
195s point1 0 0
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 
195s Slot "endTime":
195s [1] "2010-08-05 11:00:00 GMT"
195s 
195s > stidf[,1, drop=FALSE] #stays STIDF
195s An object of class "STIDF"
195s Slot "data":
195s   values      ID newVal    NewID
195s 1   8.77 OldIDs1 1.6741 NewIDs12
195s 
195s Slot "sp":
195s SpatialPoints:
195s        x y
195s point1 0 0
195s Coordinate Reference System (CRS) arguments: NA 
195s 
195s Slot "time":
195s                     timeIndex
195s 2010-08-05 10:00:00         1
195s 
195s Slot "endTime":
195s [1] "2010-08-05 11:00:00 GMT"
195s 
195s > format(as.data.frame(stidf), tz="GMT")
195s    x y    sp.ID                time             endTime timeIndex values
195s 1  0 0   point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77
195s 2  0 1   point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70
195s 3  1 1   point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70
195s 4  0 0 point1.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47
195s 5  0 1 point2.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2  21.10
195s 6  1 1 point3.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2  32.50
195s 7  0 0 point1.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  10.80
195s 8  0 1 point2.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  20.20
195s 9  1 1 point3.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  29.00
195s 10 0 0 point1.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4   9.74
195s 11 0 1 point2.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  20.70
195s 12 1 1 point3.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  30.50
195s          ID   newVal    NewID
195s 1   OldIDs1  1.67415 NewIDs12
195s 2   OldIDs2 -1.47819 NewIDs11
195s 3   OldIDs3 -1.63290 NewIDs10
195s 4   OldIDs4 -0.97491  NewIDs9
195s 5   OldIDs5 -0.76499  NewIDs8
195s 6   OldIDs6  0.10300  NewIDs7
195s 7   OldIDs7 -1.06830  NewIDs6
195s 8   OldIDs8  0.47947  NewIDs5
195s 9   OldIDs9  1.17482  NewIDs4
195s 10 OldIDs10  1.03354  NewIDs3
195s 11 OldIDs11  0.82826  NewIDs2
195s 12 OldIDs12 -0.75862  NewIDs1
195s > format(as(stidf, "data.frame"), tz="GMT")
195s    x y    sp.ID                time             endTime timeIndex values
195s 1  0 0   point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77
195s 2  0 1   point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70
195s 3  1 1   point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70
195s 4  0 0 point1.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47
195s 5  0 1 point2.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2  21.10
195s 6  1 1 point3.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2  32.50
195s 7  0 0 point1.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  10.80
195s 8  0 1 point2.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  20.20
195s 9  1 1 point3.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  29.00
195s 10 0 0 point1.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4   9.74
195s 11 0 1 point2.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  20.70
195s 12 1 1 point3.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  30.50
195s          ID   newVal    NewID
195s 1   OldIDs1  1.67415 NewIDs12
195s 2   OldIDs2 -1.47819 NewIDs11
195s 3   OldIDs3 -1.63290 NewIDs10
195s 4   OldIDs4 -0.97491  NewIDs9
195s 5   OldIDs5 -0.76499  NewIDs8
195s 6   OldIDs6  0.10300  NewIDs7
195s 7   OldIDs7 -1.06830  NewIDs6
195s 8   OldIDs8  0.47947  NewIDs5
195s 9   OldIDs9  1.17482  NewIDs4
195s 10 OldIDs10  1.03354  NewIDs3
195s 11 OldIDs11  0.82826  NewIDs2
195s 12 OldIDs12 -0.75862  NewIDs1
195s > 
195s > sp = cbind(x = c(0,0,1), y = c(0,1,1))
195s > row.names(sp) = paste("point", 1:nrow(sp), sep="")
195s > sp = SpatialPoints(sp)
195s > library(xts)
195s Loading required package: zoo
195s 
195s Attaching package: ‘zoo’
195s 
195s The following objects are masked from ‘package:base’:
195s 
195s     as.Date, as.Date.numeric
195s 
195s > time = xts(1:4, as.POSIXct("2010-08-05", tz="GMT")+3600*(10:13))
195s > mydata = rnorm(length(sp)*length(time),mean=rep(m, 4))
195s > IDs = paste("ID", 1:length(mydata), sep = "_")
195s > mydata = data.frame(values = signif(mydata,3), ID=IDs)
195s > spx = SpatialPointsDataFrame(sp, data.frame(values = c("a", "b", "c")))
195s > try(stfdf <- STFDF(spx, time, mydata))
195s > timex = time
195s > names(timex) = "values"
195s > try(stfdf <- STFDF(sp, timex, mydata))
195s Error in .checkAttrIsUnique(object@sp, object@time, object@data) : 
195s   name conflict: attribute name(s) in data already present in sp slot of ST object
195s > mydatax = mydata
195s > names(mydatax) = "x"
195s > try(stfdf <- STFDF(spx, timex, mydatax))
195s Error in .checkAttrIsUnique(object@sp, object@time, object@data) : 
195s   name conflict: attribute name(s) in data already present in time slot of ST object
195s > stfdf = STFDF(sp, timex, mydatax)
195s Error in validityMethod(object) : 
195s   name conflict: attribute names in sp and time slot must differ
195s > try(stfdf[["values"]] <- 1:12)
195s Error in .checkAttrIsUnique(x@sp, x@time, x@data) : 
195s   name conflict: attribute name(s) in data already present in time slot of ST object
195s > stfdf = STFDF(spx, time, mydatax)
195s > try(stfdf[["values"]] <- 1:12)
195s > 
195s Error in .checkAttrIsUnique(x@sp, x@time, x@data) : 
195s   name conflict: attribute name(s) in data already present in sp slot of ST object
195s BEGIN TEST over.R
195s 
195s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
195s Copyright (C) 2024 The R Foundation for Statistical Computing
195s Platform: aarch64-unknown-linux-gnu
195s 
195s R is free software and comes with ABSOLUTELY NO WARRANTY.
195s You are welcome to redistribute it under certain conditions.
195s Type 'license()' or 'licence()' for distribution details.
195s 
195s R is a collaborative project with many contributors.
195s Type 'contributors()' for more information and
195s 'citation()' on how to cite R or R packages in publications.
195s 
195s Type 'demo()' for some demos, 'help()' for on-line help, or
195s 'help.start()' for an HTML browser interface to help.
195s Type 'q()' to quit R.
195s 
195s > require(sp)
195s Loading required package: sp
195s > require(spacetime)
195s Loading required package: spacetime
196s > options(xts_check_TZ=FALSE)
196s > 
196s > # go through time matching first:
196s > x = as.POSIXct("2000-01-01", tz="GMT") + (0:9) * 3600
196s Warning messages:
196s 1: Some empty 'to' intervals encountered. Setting to NA... 
196s 2: Some empty 'from' intervals encountered. Setting to NA... 
196s > y = x + 1
196s > y[1] = y[2]
196s > format(x, tz="GMT")
196s  [1] "2000-01-01 00:00:00" "2000-01-01 01:00:00" "2000-01-01 02:00:00"
196s  [4] "2000-01-01 03:00:00" "2000-01-01 04:00:00" "2000-01-01 05:00:00"
196s  [7] "2000-01-01 06:00:00" "2000-01-01 07:00:00" "2000-01-01 08:00:00"
196s [10] "2000-01-01 09:00:00"
196s > format(y, tz="GMT")
196s  [1] "2000-01-01 01:00:01" "2000-01-01 01:00:01" "2000-01-01 02:00:01"
196s  [4] "2000-01-01 03:00:01" "2000-01-01 04:00:01" "2000-01-01 05:00:01"
196s  [7] "2000-01-01 06:00:01" "2000-01-01 07:00:01" "2000-01-01 08:00:01"
196s [10] "2000-01-01 09:00:01"
196s > end.x = delta(x)
196s > end.y = delta(y)
196s > timeMatch(y, y)
196s  [1]  1  1  3  4  5  6  7  8  9 10
196s > timeMatch(y, y, end.x = end.y, end.y = end.y)
196s  [1] NA  2  3  4  5  6  7  8  9 10
196s > 
196s > timeMatch(x, y)
196s  [1] NA NA NA NA NA NA NA NA NA NA
196s > timeMatch(x, y, end.y = end.y)
196s  [1] NA NA  2  3  4  5  6  7  8  9
196s > timeMatch(x, y, end.x = end.x)
196s  [1] NA  1  3  4  5  6  7  8  9 10
196s > timeMatch(x, y, end.x = end.x, end.y = end.y)
196s  [1] NA  2  2  3  4  5  6  7  8  9
196s > 
196s > timeMatch(x, y, returnList = TRUE)
196s [[1]]
196s integer(0)
196s 
196s [[2]]
196s integer(0)
196s 
196s [[3]]
196s integer(0)
196s 
196s [[4]]
196s integer(0)
196s 
196s [[5]]
196s integer(0)
196s 
196s [[6]]
196s integer(0)
196s 
196s [[7]]
196s integer(0)
196s 
196s [[8]]
196s integer(0)
196s 
196s [[9]]
196s integer(0)
196s 
196s [[10]]
196s integer(0)
196s 
196s > timeMatch(x, y, returnList = TRUE, end.y = end.y)
196s [[1]]
196s integer(0)
196s 
196s [[2]]
196s integer(0)
196s 
196s [[3]]
196s [1] 2
196s 
196s [[4]]
196s [1] 3
196s 
196s [[5]]
196s [1] 4
196s 
196s [[6]]
196s [1] 5
196s 
196s [[7]]
196s [1] 6
196s 
196s [[8]]
196s [1] 7
196s 
196s [[9]]
196s [1] 8
196s 
196s [[10]]
196s [1] 9
196s 
196s > timeMatch(x, y, returnList = TRUE, end.x = end.x)
196s [[1]]
196s integer(0)
196s 
196s [[2]]
196s [1] 1 2
196s 
196s [[3]]
196s [1] 3
196s 
196s [[4]]
196s [1] 4
196s 
196s [[5]]
196s [1] 5
196s 
196s [[6]]
196s [1] 6
196s 
196s [[7]]
196s [1] 7
196s 
196s [[8]]
196s [1] 8
196s 
196s [[9]]
196s [1] 9
196s 
196s [[10]]
196s [1] 10
196s 
196s > timeMatch(x, y, returnList = TRUE, end.x = end.x, end.y = end.y)
196s [[1]]
196s integer(0)
196s 
196s [[2]]
196s [1] 2
196s 
196s [[3]]
196s [1] 2 3
196s 
196s [[4]]
196s [1] 3 4
196s 
196s [[5]]
196s [1] 4 5
196s 
196s [[6]]
196s [1] 5 6
196s 
196s [[7]]
196s [1] 6 7
196s 
196s [[8]]
196s [1] 7 8
196s 
196s [[9]]
196s [1] 8 9
196s 
196s [[10]]
196s [1]  9 10
196s 
196s > 
196s > end.x = delta(x)
196s > y = x + 1 # don't replicate the first
196s > end.y = delta(y)
196s > 
196s > a = timeMatch(x, y, end.x = end.x, end.y = end.y)
196s > library(intervals)
196s > b = timeMatch(x, y, end.x = end.x, end.y = end.y)
196s > detach()
196s > all.equal(a, b)
196s [1] TRUE
196s > 
196s > a = timeMatch(x, y, end.y = end.y)
196s > library(intervals)
196s > b = timeMatch(x, y, end.y = end.y)
196s > detach()
196s > all.equal(a, b)
196s [1] TRUE
196s > 
196s > a = timeMatch(x, y, end.x = end.x)
196s > library(intervals)
196s Warning message:
196s Some empty 'to' intervals encountered. Setting to NA... 
196s Warning message:
196s Some empty 'to' intervals encountered. Setting to NA... 
196s Warning message:
196s Some empty 'to' intervals encountered. Setting to NA... 
196s Warning message:
196s Some empty 'to' intervals encountered. Setting to NA... 
196s > b = timeMatch(x, y, end.x = end.x)
196s > detach()
196s > all.equal(a, b)
196s [1] TRUE
196s > 
196s > # with end points:
196s > 
196s > # next, try ST?DF objects:
196s > t = as.POSIXct("2010-05-01", tz="GMT")+3600*1:10
196s > xy = SpatialPixels(SpatialPoints(expand.grid(1:10,1:10)))
196s > y = STFDF(xy, t, data.frame(a = 1:1000))
196s > stplot(y)
196s > x = y
196s > all(over(x, y) == 1:1000)
196s [1] TRUE
196s > 
196s > t0 = c(t[1]-1,t[c(2,4,10)]) # c() drops TZ?
196s > attr(t0, "tzone") = attr(t, "tzone")
196s > x = c(4,5,6,8)
196s > xy = SpatialPixels(SpatialPoints(expand.grid(x,rep(1,4))))
196s Warning messages:
196s 1: In points2grid(points, tolerance, round) :
196s   grid has empty column/rows in dimension 1
196s 2: In points2grid(points, tolerance, round) :
196s   cell size from constant coordinate 2 possibly taken from other coordinate
196s > x = STFDF(xy, t0, data.frame(a = 1:64))
196s > over(x, y)
196s      a
196s 1    4
196s 2    5
196s 3    6
196s 4    8
196s 5    4
196s 6    5
196s 7    6
196s 8    8
196s 9    4
196s 10   5
196s 11   6
196s 12   8
196s 13   4
196s 14   5
196s 15   6
196s 16   8
196s 17 104
196s 18 105
196s 19 106
196s 20 108
196s 21 104
196s 22 105
196s 23 106
196s 24 108
196s 25 104
196s 26 105
196s 27 106
196s 28 108
196s 29 104
196s 30 105
196s 31 106
196s 32 108
196s 33 304
196s 34 305
196s 35 306
196s 36 308
196s 37 304
196s 38 305
196s 39 306
196s 40 308
196s 41 304
196s 42 305
196s 43 306
196s 44 308
196s 45 304
196s 46 305
196s 47 306
196s 48 308
196s 49 904
196s 50 905
196s 51 906
196s 52 908
196s 53 904
196s 54 905
196s 55 906
196s 56 908
196s 57 904
196s 58 905
196s 59 906
196s 60 908
196s 61 904
196s 62 905
196s 63 906
196s 64 908
196s > 
196s > x = as(x, "STSDF")
196s > over(x, y)
196s      a
196s 1    4
196s 2    5
196s 3    6
196s 4    8
196s 5    4
196s 6    5
196s 7    6
196s 8    8
196s 9    4
196s 10   5
196s 11   6
196s 12   8
196s 13   4
196s 14   5
196s 15   6
196s 16   8
196s 17 104
196s 18 105
196s 19 106
196s 20 108
196s 21 104
196s 22 105
196s 23 106
196s 24 108
196s 25 104
196s 26 105
196s 27 106
196s 28 108
196s 29 104
196s 30 105
196s 31 106
196s 32 108
196s 33 304
196s 34 305
196s 35 306
196s 36 308
196s 37 304
196s 38 305
196s 39 306
196s 40 308
196s 41 304
196s 42 305
196s 43 306
196s 44 308
196s 45 304
196s 46 305
196s 47 306
196s 48 308
196s 49 904
196s 50 905
196s 51 906
196s 52 908
196s 53 904
196s 54 905
196s 55 906
196s 56 908
196s 57 904
196s 58 905
196s 59 906
196s 60 908
196s 61 904
196s 62 905
196s 63 906
196s 64 908
196s > 
196s > xy = SpatialPoints(cbind(c(1,3,5,10),c(5, 3, 8, 2)))
196s > x = STIDF(xy, t0, data.frame(a = 1:4))
196s > over(x,y)
196s     a
196s 1  NA
196s 2 123
196s 3 375
196s 4 920
196s > 
196s > t1 = c(t[1]-1,t[c(2,2,10)])
196s > attr(t1, "tzone") = attr(t, "tzone")
196s > x1 = STIDF(xy[c(1,2,2,4)], t1, data.frame(a = 1:4))
196s > 
196s > over(x1, x)
196s   a
196s 1 1
196s 2 2
196s 3 2
196s 4 4
196s > over(x, x1)
196s    a
196s 1  1
196s 2  2
196s 3 NA
196s 4  4
196s > over(x1, x, returnList = TRUE)
196s [[1]]
196s   a
196s 1 1
196s 
196s [[2]]
196s   a
196s 2 2
196s 
196s [[3]]
196s   a
196s 2 2
196s 
196s [[4]]
196s   a
196s 4 4
196s 
196s > over(x, x1, returnList = TRUE)
196s [[1]]
196s   a
196s 1 1
196s 
196s [[2]]
196s   a
196s 2 2
196s 4 4
196s 
196s [[3]]
196s [1] a
196s <0 rows> (or 0-length row.names)
196s 
196s [[4]]
196s   a
196s 4 4
196s 
196s > 
196s BEGIN TEST raster.R
196s 
196s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
196s Copyright (C) 2024 The R Foundation for Statistical Computing
196s Platform: aarch64-unknown-linux-gnu
196s 
196s R is free software and comes with ABSOLUTELY NO WARRANTY.
196s You are welcome to redistribute it under certain conditions.
196s Type 'license()' or 'licence()' for distribution details.
196s 
196s R is a collaborative project with many contributors.
196s Type 'contributors()' for more information and
196s 'citation()' on how to cite R or R packages in publications.
196s 
196s Type 'demo()' for some demos, 'help()' for on-line help, or
196s 'help.start()' for an HTML browser interface to help.
196s Type 'q()' to quit R.
196s 
196s > library(spacetime)
197s > if (require(raster, quietly = TRUE)) {
197s +  x <- brick(system.file("external/rlogo.grd", package="raster"))
197s +  x <- setZ(x, as.Date(1:nlayers(x), origin = "1970-01-01"))
197s +  stplot(x)
197s + }
198s code for methods in class “Rcpp_SpatCategories” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatCategories” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatDataFrame” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatDataFrame” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatFactor” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatFactor” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatGraph” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatGraph” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatMessages” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatMessages” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatOptions” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
198s code for methods in class “Rcpp_SpatOptions” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatRaster” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatRaster” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatRasterCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatRasterCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatRasterStack” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatRasterStack” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatSRS” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatSRS” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatTime_v” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatTime_v” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatVector” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatVector” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatVectorCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatVectorCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatVectorProxy” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
199s code for methods in class “Rcpp_SpatVectorProxy” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
201s code for methods in class “Rcpp_SpExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
201s code for methods in class “Rcpp_SpExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
201s code for methods in class “Rcpp_SpPoly” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
201s code for methods in class “Rcpp_SpPoly” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
201s code for methods in class “Rcpp_SpPolyPart” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
201s code for methods in class “Rcpp_SpPolyPart” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
201s code for methods in class “Rcpp_SpPolygons” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
201s code for methods in class “Rcpp_SpPolygons” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
202s > 
202s BEGIN TEST rw.R
202s 
202s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
202s Copyright (C) 2024 The R Foundation for Statistical Computing
202s Platform: aarch64-unknown-linux-gnu
202s 
202s R is free software and comes with ABSOLUTELY NO WARRANTY.
202s You are welcome to redistribute it under certain conditions.
202s Type 'license()' or 'licence()' for distribution details.
202s 
202s R is a collaborative project with many contributors.
202s Type 'contributors()' for more information and
202s 'citation()' on how to cite R or R packages in publications.
202s 
202s Type 'demo()' for some demos, 'help()' for on-line help, or
202s 'help.start()' for an HTML browser interface to help.
202s Type 'q()' to quit R.
202s 
202s > suppressPackageStartupMessages(library(sp))
203s > suppressPackageStartupMessages(library(spacetime))
203s > 
203s > m = 3# nr of trajectories
203s > n = 100 # length of each
203s > l = vector("list", m)
203s > t0 = as.POSIXct("2013-05-05",tz="GMT")
203s > set.seed(1331)
203s > for (i in 1:m) {
203s +     x = cumsum(rnorm(n))
203s +     y = cumsum(rnorm(n))
203s +     sp = SpatialPoints(cbind(x,y))
203s +     #t = t0 + (0:(n-1) + (i-1)*n) * 60
203s +     t = t0 + (0:(n-1) + (i-1)*n/2) * 60
203s +     l[[i]] = STI(sp, t)
203s + }
203s > stt= STT(l)
203s > sttdf = STTDF(stt, data.frame(attr = rnorm(n*m), id = paste("ID", rep(1:m, each=n))))
203s > x = as(stt, "STI")
203s > stplot(sttdf, col=1:m, scales=list(draw=TRUE))
203s > stplot(sttdf, by = "id")
203s > stplot(sttdf[1])
203s > stplot(sttdf[1])
203s > 
203s > p = Polygon(cbind(x=c(-20,-15,-15,-20,-20),y=c(10,10,15,15,10)))
203s > pol=SpatialPolygons(list(Polygons(list(p), "ID")))
203s > #if (require(rgeos, quietly = TRUE)) {
203s > #  stplot(sttdf[pol])
203s > #  names(sttdf[pol]@traj)
203s > #  stplot(sttdf[1:2],col=1:2)
203s > #  stplot(sttdf[,t0])
203s > #  stplot(sttdf[,"2013"])
203s > #  stplot(sttdf[pol,"2013"])
203s > #  is.null(sttdf[pol,t0])
203s > #}
203s > 
203s BEGIN TEST stconstruct.R
203s 
203s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
203s Copyright (C) 2024 The R Foundation for Statistical Computing
203s Platform: aarch64-unknown-linux-gnu
203s 
203s R is free software and comes with ABSOLUTELY NO WARRANTY.
203s You are welcome to redistribute it under certain conditions.
203s Type 'license()' or 'licence()' for distribution details.
203s 
203s R is a collaborative project with many contributors.
203s Type 'contributors()' for more information and
203s 'citation()' on how to cite R or R packages in publications.
203s 
203s Type 'demo()' for some demos, 'help()' for on-line help, or
203s 'help.start()' for an HTML browser interface to help.
203s Type 'q()' to quit R.
203s 
203s > suppressPackageStartupMessages(library(sp))
204s > suppressPackageStartupMessages(library(spacetime))
204s > suppressPackageStartupMessages(library(xts))
204s > 
204s > # example 0: construction with STFDF:
204s > 
204s > ## IGNORE_RDIFF_BEGIN
204s > if (require(maps, quietly = TRUE)) {
204s + states.m = map('state', plot=FALSE, fill=TRUE)
204s + IDs <- sapply(strsplit(states.m$names, ":"), function(x) x[1])
204s +     
204s + if (require(sf, quietly = TRUE)) {
204s + sta = st_as_sf(states.m)
204s + row.names(sta) = unique(IDs)
204s + states = geometry(as(sta, "Spatial"))
204s + 
204s + if (require(plm, quietly = TRUE)) {
204s + data(Produc)
204s + 
204s + yrs = 1970:1986
204s + time = xts(1:17, as.POSIXct(paste(yrs, "-01-01", sep=""), tz = "GMT"))
204s + # deselect District of Columbia, polygon 8, which is not present in Produc:
204s + Produc.st = STFDF(states[-8], time, Produc[(order(Produc[,2], Produc[,1])),])
204s + #stplot(Produc.st[,,"unemp"], yrs)
204s + 
204s + # example 1: st from long table, with states as Spatial object:
204s + # use Date format for time:
204s + Produc$time = as.Date(paste(yrs, "01", "01", sep = "-"))
204s + xy = coordinates(states[-8])
204s + Produc$x = xy[,1]
204s + Produc$y = xy[,2]
204s + #using stConstruct, use polygon centroids for location:
204s + x = stConstruct(Produc, c("x", "y"), "time")
204s + class(x)
204s + stplot(x[,,"unemp"])
204s + 
204s + # alternatively, pass states:
204s + Produc$state = gsub("TENNESSE", "TENNESSEE", Produc$state)
204s + Produc$State = gsub("_", " ", tolower(Produc$state))
204s + x = stConstruct(Produc, "State", "time", states[-8])
204s + class(x)
204s + #stplot(x[,,"unemp"], yrs)
204s + 
204s + if (require(sf, quietly = TRUE)) {
204s + # stConstruct multivariable, time-wide
204s + fname = system.file("shape/nc.shp", package="sf")[1]
204s + nc = as(read_sf(fname), "Spatial")
204s + timesList = list(
204s + 	BIR=c("BIR74", "BIR79"), 
204s + 	NWBIR=c("NWBIR74", "NWBIR79"), 
204s + 	SID=c("SID74", "SID79")
204s + )
204s + t = xts(1:2, as.Date(c("1974-01-01","1979-01-01")))
204s + nc.st = stConstruct(as(nc, "data.frame"), geometry(nc), timesList,
204s + 	TimeObj = t)
204s + }
204s + }}}
205s Linking to GEOS 3.13.0, GDAL 3.9.3, PROJ 9.4.0; sf_use_s2() is TRUE
205s WARNING: different compile-time and runtime versions for GEOS found:
205s Linked against: 3.13.0-CAPI-1.19.0 compiled against: 3.12.1-CAPI-1.18.1
205s It is probably a good idea to reinstall sf (and maybe lwgeom too)
205s Error in process_cpl_read_ogr(x, quiet, check_ring_dir = check_ring_dir,  : 
205s   package tibble not available: install first?
205s Calls: as ... st_read -> st_read.character -> process_cpl_read_ogr
205s Execution halted
205s autopkgtest [20:44:03]: test run-unit-test: -----------------------]
206s run-unit-test        FAIL non-zero exit status 1
206s autopkgtest [20:44:04]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
206s autopkgtest [20:44:04]: test pkg-r-autopkgtest: preparing testbed
291s autopkgtest [20:45:29]: testbed dpkg architecture: arm64
291s autopkgtest [20:45:29]: testbed apt version: 2.9.8
291s autopkgtest [20:45:29]: @@@@@@@@@@@@@@@@@@@@ test bed setup
292s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
292s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [925 kB]
292s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9704 B]
292s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.6 kB]
292s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [53.2 kB]
292s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [85.2 kB]
292s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [57.8 kB]
292s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [790 kB]
292s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [19.3 kB]
293s Fetched 2028 kB in 1s (2253 kB/s)
293s Reading package lists...
295s Reading package lists...
296s Building dependency tree...
296s Reading state information...
296s Calculating upgrade...
297s The following package was automatically installed and is no longer required:
297s   libsgutils2-1.46-2
297s Use 'sudo apt autoremove' to remove it.
297s The following NEW packages will be installed:
297s   libsgutils2-1.48
297s The following packages will be upgraded:
297s   bash bpftrace curl debconf debconf-i18n distro-info dracut-install
297s   fwupd-signed gir1.2-girepository-2.0 gir1.2-glib-2.0 hostname
297s   libaudit-common libaudit1 libcurl3t64-gnutls libcurl4t64
297s   libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libpam-modules
297s   libpam-modules-bin libpam-runtime libpam0g libplymouth5 libselinux1
297s   libsemanage-common libsemanage2 linux-base lxd-installer openssh-client
297s   openssh-server openssh-sftp-server pinentry-curses plymouth
297s   plymouth-theme-ubuntu-text python3-blinker python3-dbus python3-debconf
297s   python3-gi python3-jsonschema-specifications python3-rpds-py python3-yaml
297s   sg3-utils sg3-utils-udev vim-common vim-tiny xxd
297s 46 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
297s Need to get 11.7 MB of archives.
297s After this operation, 2984 kB of additional disk space will be used.
297s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 bash arm64 5.2.32-1ubuntu2 [791 kB]
298s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 hostname arm64 3.25 [11.0 kB]
298s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libaudit-common all 1:4.0.2-2ubuntu1 [6578 B]
298s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libaudit1 arm64 1:4.0.2-2ubuntu1 [54.2 kB]
298s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 debconf-i18n all 1.5.87ubuntu1 [204 kB]
298s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-debconf all 1.5.87ubuntu1 [4156 B]
298s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 debconf all 1.5.87ubuntu1 [124 kB]
298s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam0g arm64 1.5.3-7ubuntu4 [68.6 kB]
298s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libselinux1 arm64 3.7-3ubuntu1 [81.6 kB]
298s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam-modules-bin arm64 1.5.3-7ubuntu4 [50.4 kB]
298s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam-modules arm64 1.5.3-7ubuntu4 [285 kB]
298s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 openssh-sftp-server arm64 1:9.9p1-3ubuntu2 [36.8 kB]
298s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 openssh-server arm64 1:9.9p1-3ubuntu2 [524 kB]
298s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 openssh-client arm64 1:9.9p1-3ubuntu2 [920 kB]
298s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam-runtime all 1.5.3-7ubuntu4 [40.8 kB]
298s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libsemanage-common all 3.7-2build1 [7186 B]
298s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libsemanage2 arm64 3.7-2build1 [92.2 kB]
298s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 distro-info arm64 1.12 [19.4 kB]
298s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gir1.2-girepository-2.0 arm64 1.82.0-2 [25.2 kB]
298s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 gir1.2-glib-2.0 arm64 2.82.2-3 [182 kB]
298s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1560 kB]
298s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libgirepository-1.0-1 arm64 1.82.0-2 [83.0 kB]
298s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libglib2.0-data all 2.82.2-3 [51.7 kB]
298s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dbus arm64 1.3.2-5build4 [109 kB]
298s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-gi arm64 3.50.0-3build1 [279 kB]
298s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-yaml arm64 6.0.2-1build1 [164 kB]
298s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 vim-tiny arm64 2:9.1.0861-1ubuntu1 [805 kB]
298s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 vim-common all 2:9.1.0861-1ubuntu1 [395 kB]
298s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 xxd arm64 2:9.1.0861-1ubuntu1 [67.3 kB]
298s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libplymouth5 arm64 24.004.60-2ubuntu3 [141 kB]
298s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 plymouth-theme-ubuntu-text arm64 24.004.60-2ubuntu3 [9914 B]
298s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 plymouth arm64 24.004.60-2ubuntu3 [135 kB]
298s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 bpftrace arm64 0.21.2-2ubuntu3 [1854 kB]
298s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 curl arm64 8.9.1-2ubuntu3 [235 kB]
298s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libcurl4t64 arm64 8.9.1-2ubuntu3 [365 kB]
298s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 dracut-install arm64 105-2ubuntu2 [34.7 kB]
298s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 fwupd-signed arm64 1.55+1.7-1 [30.9 kB]
298s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libcurl3t64-gnutls arm64 8.9.1-2ubuntu3 [359 kB]
298s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libsgutils2-1.48 arm64 1.48-0ubuntu1 [118 kB]
298s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 linux-base all 4.10.1ubuntu1 [34.8 kB]
298s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 lxd-installer all 10 [5264 B]
298s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-0ubuntu2 [38.5 kB]
298s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-blinker all 1.9.0-1 [10.7 kB]
298s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-rpds-py arm64 0.21.0-2ubuntu1 [302 kB]
298s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jsonschema-specifications all 2023.12.1-2 [9116 B]
298s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 sg3-utils arm64 1.48-0ubuntu1 [999 kB]
298s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 sg3-utils-udev all 1.48-0ubuntu1 [6608 B]
299s Preconfiguring packages ...
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299s Setting up bash (5.2.32-1ubuntu2) ...
299s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode
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300s Setting up libaudit1:arm64 (1:4.0.2-2ubuntu1) ...
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306s Setting up libcurl4t64:arm64 (8.9.1-2ubuntu3) ...
306s Setting up bpftrace (0.21.2-2ubuntu3) ...
306s Setting up openssh-client (1:9.9p1-3ubuntu2) ...
306s Setting up python3-debconf (1.5.87ubuntu1) ...
306s Setting up libcurl3t64-gnutls:arm64 (8.9.1-2ubuntu3) ...
306s Setting up fwupd-signed (1.55+1.7-1) ...
306s Setting up libsgutils2-1.48:arm64 (1.48-0ubuntu1) ...
306s Setting up python3-yaml (6.0.2-1build1) ...
307s Setting up debconf-i18n (1.5.87ubuntu1) ...
307s Setting up xxd (2:9.1.0861-1ubuntu1) ...
307s Setting up libglib2.0-0t64:arm64 (2.82.2-3) ...
307s No schema files found: doing nothing.
307s Setting up libglib2.0-data (2.82.2-3) ...
307s Setting up vim-common (2:9.1.0861-1ubuntu1) ...
307s Setting up gir1.2-glib-2.0:arm64 (2.82.2-3) ...
307s Setting up lxd-installer (10) ...
307s Setting up python3-rpds-py (0.21.0-2ubuntu1) ...
307s Setting up dracut-install (105-2ubuntu2) ...
307s Setting up libplymouth5:arm64 (24.004.60-2ubuntu3) ...
307s Setting up libgirepository-1.0-1:arm64 (1.82.0-2) ...
307s Setting up curl (8.9.1-2ubuntu3) ...
307s Setting up python3-jsonschema-specifications (2023.12.1-2) ...
307s Setting up sg3-utils (1.48-0ubuntu1) ...
307s Setting up python3-blinker (1.9.0-1) ...
308s Setting up openssh-sftp-server (1:9.9p1-3ubuntu2) ...
308s Setting up python3-dbus (1.3.2-5build4) ...
308s Setting up openssh-server (1:9.9p1-3ubuntu2) ...
308s Installing new version of config file /etc/ssh/moduli ...
308s Replacing config file /etc/ssh/sshd_config with new version
309s Setting up plymouth (24.004.60-2ubuntu3) ...
309s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
309s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
328s flash-kernel: deferring update (trigger activated)
328s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
328s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
328s Setting up vim-tiny (2:9.1.0861-1ubuntu1) ...
328s Setting up sg3-utils-udev (1.48-0ubuntu1) ...
328s update-initramfs: deferring update (trigger activated)
328s Setting up plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) ...
328s update-initramfs: deferring update (trigger activated)
328s Setting up gir1.2-girepository-2.0:arm64 (1.82.0-2) ...
328s Setting up python3-gi (3.50.0-3build1) ...
329s Processing triggers for install-info (7.1.1-1) ...
329s Processing triggers for initramfs-tools (0.142ubuntu35) ...
329s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
329s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
341s System running in EFI mode, skipping.
341s Processing triggers for libc-bin (2.40-1ubuntu3) ...
341s Processing triggers for ufw (0.36.2-8) ...
341s Processing triggers for man-db (2.13.0-1) ...
343s Processing triggers for debianutils (5.21) ...
343s Processing triggers for flash-kernel (3.107ubuntu13) ...
343s System running in EFI mode, skipping.
343s Reading package lists...
343s Building dependency tree...
343s Reading state information...
344s The following packages will be REMOVED:
344s   libsgutils2-1.46-2*
344s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
344s After this operation, 314 kB disk space will be freed.
344s (Reading database ... 
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(Reading database ... 80037 files and directories currently installed.)
345s Removing libsgutils2-1.46-2:arm64 (1.46-3ubuntu5) ...
345s Processing triggers for libc-bin (2.40-1ubuntu3) ...
345s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
345s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
345s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
345s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
346s Reading package lists...
346s Reading package lists...
346s Building dependency tree...
346s Reading state information...
347s Calculating upgrade...
347s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
347s Reading package lists...
348s Building dependency tree...
348s Reading state information...
348s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
348s autopkgtest [20:46:26]: rebooting testbed after setup commands that affected boot
352s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
381s Reading package lists...
381s Building dependency tree...
381s Reading state information...
381s Starting pkgProblemResolver with broken count: 0
381s Starting 2 pkgProblemResolver with broken count: 0
381s Done
382s The following additional packages will be installed:
382s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
382s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
382s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14
382s   g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
382s   gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gdal-data gdal-plugins
382s   gfortran gfortran-14 gfortran-14-aarch64-linux-gnu
382s   gfortran-aarch64-linux-gnu icu-devtools javascript-common libaec0 libaom3
382s   libarmadillo14 libarpack2t64 libasan8 libblas-dev libblas3 libblosc1
382s   libbz2-dev libcairo2 libcc1-0 libcfitsio10t64 libdatrie1 libde265-0
382s   libdeflate-dev libdeflate0 libfontconfig1 libfreexl1 libfyba0t64
382s   libgcc-14-dev libgdal35 libgeos-c1t64 libgeos3.13.0 libgeotiff5
382s   libgfortran-14-dev libgfortran5 libgif7 libgomp1 libgpgmepp6t64
382s   libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64
382s   libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1
382s   libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev
382s   libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap
382s   libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
382s   libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
382s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
382s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
382s   libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3
382s   liblcms2-2 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64
382s   libmpc3 libmysqlclient21 libncurses-dev libnetcdf19t64 libodbc2 libodbcinst2
382s   libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
382s   libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
382s   libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpoppler140 libpq5
382s   libproj25 libqhull-r8.0 libreadline-dev librttopo1 libsharpyuv0 libsm6
382s   libsnappy1v5 libspatialite8t64 libstdc++-14-dev libsz2 libtcl8.6
382s   libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1
382s   libudunits2-0 libudunits2-data liburiparser1 libwebp7 libxcb-render0
382s   libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler
382s   mysql-common node-bootstrap-sass node-html5shiv node-normalize.css pandoc
382s   pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin proj-data r-base-core
382s   r-base-dev r-cran-base64enc r-cran-bdsmatrix r-cran-bslib r-cran-cachem
382s   r-cran-class r-cran-classint r-cran-cli r-cran-collapse r-cran-commonmark
382s   r-cran-crayon r-cran-dbi r-cran-digest r-cran-e1071 r-cran-evaluate
382s   r-cran-fastmap r-cran-fontawesome r-cran-foreign r-cran-formula r-cran-fs
382s   r-cran-generics r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv
382s   r-cran-intervals r-cran-isocodes r-cran-jquerylib r-cran-jsonlite
382s   r-cran-kernsmooth r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle
382s   r-cran-littler r-cran-lmtest r-cran-magrittr r-cran-mapdata r-cran-maps
382s   r-cran-markdown r-cran-mass r-cran-maxlik r-cran-memoise r-cran-mime
382s   r-cran-misctools r-cran-nlme r-cran-pkgkitten r-cran-plm r-cran-promises
382s   r-cran-proxy r-cran-r6 r-cran-rappdirs r-cran-raster r-cran-rbibutils
382s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rmarkdown
382s   r-cran-rpostgresql r-cran-s2 r-cran-sandwich r-cran-sass r-cran-sf
382s   r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-terra
382s   r-cran-tinytex r-cran-units r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable
382s   r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common unzip x11-common xdg-utils
382s   zip zlib1g-dev
382s Suggested packages:
382s   cpp-doc gcc-14-locales cpp-14-doc debtags gcc-14-doc gcc-multilib
382s   manpages-dev autoconf automake libtool flex bison gdb gcc-doc
382s   gdb-aarch64-linux-gnu gfortran-doc gfortran-14-doc libcoarrays-dev apache2
382s   | lighttpd | httpd liblapack-doc geotiff-bin gdal-bin libgeotiff-epsg
382s   libhdf4-alt-dev hdf4-tools libheif-plugin-x265 libheif-plugin-ffmpegdec
382s   libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec
382s   libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e
382s   libheif-plugin-svtenc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras
382s   fonts-stix libjs-mathjax-doc liblcms2-utils liblzma-doc ncurses-doc
382s   odbc-postgresql tdsodbc ogdi-bin proj-bin readline-doc libstdc++-14-doc
382s   tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex
382s   pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff
382s   ghc php python ruby libjs-katex citation-style-language-styles elpa-ess
382s   r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
382s   texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra
382s   texlive-extra-utils texinfo r-cran-rstudioapi r-cran-rmysql r-cran-covr
382s   r-cran-tibble r-cran-testthat r-cran-getopt r-cran-mapproj r-cran-httr
382s   r-cran-roxygen2 r-cran-inline r-cran-survival
382s Recommended packages:
382s   bzip2-doc proj-bin libheif-plugin-aomenc node-jquery libpng-tools
382s   poppler-data r-recommended r-doc-html r-cran-curl r-cran-future
382s   r-cran-ggplot2 r-cran-testthat r-cran-thematic r-cran-spdata r-cran-tinytest
382s   r-cran-callr r-cran-covr r-cran-htmlwidgets r-cran-mockery r-cran-processx
382s   r-cran-ps r-cran-rprojroot r-cran-rstudioapi r-cran-tibble r-cran-whoami
382s   r-cran-data.table r-cran-rcpparmadillo r-cran-rcppeigen r-cran-dplyr
382s   r-cran-scales r-cran-microbenchmark r-cran-xml2 r-cran-rsvg r-cran-pillar
382s   r-cran-spelling r-cran-vctrs r-cran-pkgload r-cran-rsqlite r-cran-waldo
382s   r-cran-testit r-cran-cairo r-cran-ragg r-cran-httr r-cran-r.rsp
382s   r-cran-codetools r-cran-formatr r-cran-gridsvg r-cran-jpeg r-cran-magick
382s   r-cran-png r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-webshot
382s   r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-rcurl
382s   r-cran-clue r-cran-plot3d r-cran-runit r-cran-aer r-cran-car r-cran-spdep
382s   r-cran-statmod r-cran-urca r-cran-bookdown r-cran-purrr r-cran-cba
382s   r-cran-ncdf4 r-cran-igraph r-cran-gstat r-cran-fields r-cran-exactextractr
382s   r-cran-gbrd r-cran-usethis r-cran-dygraphs r-cran-rsconnect r-cran-downlit
382s   r-cran-bit64 r-cran-blob r-cran-nanoarrow r-cran-lwgeom r-cran-matrix
382s   r-cran-pbapply r-cran-spatstat r-cran-spatstat.geom r-cran-spatstat.random
382s   r-cran-spatstat.linnet r-cran-spatstat.utils r-cran-stars r-cran-tidyr
382s   r-cran-tidyselect r-cran-dt r-cran-deldir r-cran-sftime r-cran-xml
382s   r-cran-vdiffr r-cran-readr r-cran-remotes r-cran-renv r-cran-timeseries
382s   r-cran-timedate r-cran-tseries r-cran-chron libfile-mimeinfo-perl
382s   libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
382s The following NEW packages will be installed:
382s   autopkgtest-satdep build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu
382s   cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config
382s   fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome
382s   fonts-glyphicons-halflings fonts-mathjax g++ g++-14 g++-14-aarch64-linux-gnu
382s   g++-aarch64-linux-gnu gcc gcc-14 gcc-14-aarch64-linux-gnu
382s   gcc-aarch64-linux-gnu gdal-data gdal-plugins gfortran gfortran-14
382s   gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools
382s   javascript-common libaec0 libaom3 libarmadillo14 libarpack2t64 libasan8
382s   libblas-dev libblas3 libblosc1 libbz2-dev libcairo2 libcc1-0 libcfitsio10t64
382s   libdatrie1 libde265-0 libdeflate-dev libdeflate0 libfontconfig1 libfreexl1
382s   libfyba0t64 libgcc-14-dev libgdal35 libgeos-c1t64 libgeos3.13.0 libgeotiff5
382s   libgfortran-14-dev libgfortran5 libgif7 libgomp1 libgpgmepp6t64
382s   libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64
382s   libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1
382s   libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev
382s   libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap
382s   libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
382s   libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
382s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
382s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
382s   libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3
382s   liblcms2-2 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64
382s   libmpc3 libmysqlclient21 libncurses-dev libnetcdf19t64 libodbc2 libodbcinst2
382s   libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
382s   libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
382s   libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpoppler140 libpq5
382s   libproj25 libqhull-r8.0 libreadline-dev librttopo1 libsharpyuv0 libsm6
382s   libsnappy1v5 libspatialite8t64 libstdc++-14-dev libsz2 libtcl8.6
382s   libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1
382s   libudunits2-0 libudunits2-data liburiparser1 libwebp7 libxcb-render0
382s   libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler
382s   mysql-common node-bootstrap-sass node-html5shiv node-normalize.css pandoc
382s   pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin proj-data r-base-core
382s   r-base-dev r-cran-base64enc r-cran-bdsmatrix r-cran-bslib r-cran-cachem
382s   r-cran-class r-cran-classint r-cran-cli r-cran-collapse r-cran-commonmark
382s   r-cran-crayon r-cran-dbi r-cran-digest r-cran-e1071 r-cran-evaluate
382s   r-cran-fastmap r-cran-fontawesome r-cran-foreign r-cran-formula r-cran-fs
382s   r-cran-generics r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv
382s   r-cran-intervals r-cran-isocodes r-cran-jquerylib r-cran-jsonlite
382s   r-cran-kernsmooth r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle
382s   r-cran-littler r-cran-lmtest r-cran-magrittr r-cran-mapdata r-cran-maps
382s   r-cran-markdown r-cran-mass r-cran-maxlik r-cran-memoise r-cran-mime
382s   r-cran-misctools r-cran-nlme r-cran-pkgkitten r-cran-plm r-cran-promises
382s   r-cran-proxy r-cran-r6 r-cran-rappdirs r-cran-raster r-cran-rbibutils
382s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rmarkdown
382s   r-cran-rpostgresql r-cran-s2 r-cran-sandwich r-cran-sass r-cran-sf
382s   r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-terra
382s   r-cran-tinytex r-cran-units r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable
382s   r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common unzip x11-common xdg-utils
382s   zip zlib1g-dev
382s 0 upgraded, 254 newly installed, 0 to remove and 0 not upgraded.
382s Need to get 288 MB/288 MB of archives.
382s After this operation, 958 MB of additional disk space will be used.
382s Get:1 /tmp/autopkgtest.rnapaj/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [796 B]
382s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
383s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
383s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [10.6 MB]
383s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-8ubuntu1 [1028 B]
383s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B]
383s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB]
383s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-8ubuntu1 [49.7 kB]
383s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB]
383s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-8ubuntu1 [27.8 kB]
383s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-8ubuntu1 [2893 kB]
383s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-8ubuntu1 [1283 kB]
383s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-8ubuntu1 [2686 kB]
383s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-8ubuntu1 [1151 kB]
383s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-8ubuntu1 [1598 kB]
384s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-8ubuntu1 [2594 kB]
384s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [20.9 MB]
384s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-8ubuntu1 [518 kB]
384s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B]
384s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B]
384s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-8ubuntu1 [2476 kB]
384s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [12.1 MB]
385s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-8ubuntu1 [19.9 kB]
385s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B]
385s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B]
385s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
385s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB]
385s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
385s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
385s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB]
385s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB]
385s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB]
385s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
385s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
385s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
385s Get:36 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-data all 3.9.3+dfsg-1build1 [269 kB]
385s Get:37 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-plugins arm64 3.9.3+dfsg-1build1 [25.3 kB]
385s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB]
385s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-8ubuntu1 [498 kB]
385s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [11.4 MB]
385s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-8ubuntu1 [11.9 kB]
385s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1022 B]
385s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.1.0-2ubuntu1 [1162 B]
385s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 74.2-1ubuntu4 [210 kB]
385s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 11+nmu1 [5936 B]
385s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB]
385s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libaom3 arm64 3.11.0-1 [1837 kB]
385s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB]
385s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB]
385s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarpack2t64 arm64 3.9.1-1.1ubuntu1 [94.3 kB]
385s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarmadillo14 arm64 1:14.0.1+dfsg-2build1 [104 kB]
385s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.0-3build2 [120 kB]
385s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB]
385s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 libblosc1 arm64 1.21.5+ds-1build1 [25.7 kB]
385s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB]
385s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
385s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
385s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
385s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
385s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
385s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcfitsio10t64 arm64 4.4.1-2 [511 kB]
385s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
385s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libde265-0 arm64 1.0.15-1build4 [146 kB]
385s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB]
385s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.22-1 [53.8 kB]
385s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfyba0t64 arm64 4.1.1-11build1 [120 kB]
386s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [23.1 kB]
386s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfreexl1 arm64 2.0.0-1build2 [41.9 kB]
386s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos3.13.0 arm64 3.13.0-1 [918 kB]
386s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos-c1t64 arm64 3.13.0-1 [92.6 kB]
386s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 proj-data all 9.5.0-1 [7919 kB]
386s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
386s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
386s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
386s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
386s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB]
386s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB]
386s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
386s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 libproj25 arm64 9.5.0-1 [1339 kB]
386s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeotiff5 arm64 1.7.3-1 [60.8 kB]
386s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB]
386s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B]
386s Get:83 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf4-0-alt arm64 4.3.0-1 [271 kB]
386s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB]
386s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-aomdec arm64 1.19.3-1 [11.3 kB]
386s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-libde265 arm64 1.19.3-1 [8722 B]
386s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif1 arm64 1.19.3-1 [362 kB]
386s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB]
386s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlbase1t64 arm64 1.3.0-12build1 [47.8 kB]
386s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmldom1t64 arm64 1.3.0-12build1 [146 kB]
386s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlengine1t64 arm64 1.3.0-12build1 [68.1 kB]
386s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 mysql-common all 5.8+1.1.1 [6800 B]
386s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libmysqlclient21 arm64 8.0.40-1 [1241 kB]
386s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB]
386s Get:95 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnetcdf19t64 arm64 1:4.9.2-6ubuntu1 [466 kB]
386s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libltdl7 arm64 2.4.7-8 [40.6 kB]
386s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbc2 arm64 2.3.12-1ubuntu1 [145 kB]
386s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B]
386s Get:99 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbcinst2 arm64 2.3.12-1ubuntu1 [29.8 kB]
386s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libogdi4.1 arm64 4.1.1+ds-5 [217 kB]
386s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu1 [182 kB]
386s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libgpgmepp6t64 arm64 1.24.0-2ubuntu1 [119 kB]
386s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB]
387s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 libpoppler140 arm64 24.08.0-3 [1124 kB]
387s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libpq5 arm64 17.0-1 [248 kB]
387s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB]
387s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 librttopo1 arm64 1.1.0-3build2 [187 kB]
387s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 libspatialite8t64 arm64 5.1.0-3build1 [1814 kB]
387s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3 [874 kB]
387s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgdal35 arm64 3.9.3+dfsg-1build1 [8678 kB]
387s Get:111 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
387s Get:112 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.0.1-1 [487 kB]
387s Get:113 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
387s Get:114 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
387s Get:115 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 74.2-1ubuntu4 [11.9 MB]
388s Get:116 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB]
388s Get:117 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
388s Get:118 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
388s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
388s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
388s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB]
388s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB]
388s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
388s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
388s Get:125 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
388s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
388s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
388s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
388s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
388s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
388s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
388s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
388s Get:133 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.0-3build2 [4419 kB]
388s Get:134 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.6-3build2 [158 kB]
388s Get:135 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5-2 [385 kB]
388s Get:136 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
388s Get:137 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
388s Get:138 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-3 [234 kB]
388s Get:139 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-3 [48.9 kB]
388s Get:140 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-3 [27.5 kB]
388s Get:141 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper1 arm64 1.1.29build1 [13.4 kB]
388s Get:142 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 1.1.29build1 [8490 B]
388s Get:143 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB]
388s Get:144 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu3 [187 kB]
388s Get:145 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu3 [6704 B]
388s Get:146 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.42-4ubuntu3 [694 kB]
388s Get:147 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB]
388s Get:148 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
388s Get:149 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.44-2 [270 kB]
388s Get:150 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-5 [179 kB]
388s Get:151 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
388s Get:152 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [987 kB]
388s Get:153 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
388s Get:154 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
388s Get:155 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.15-1 [774 kB]
388s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-data all 2.2.28-7build1 [19.4 kB]
388s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-0 arm64 2.2.28-7build1 [52.8 kB]
388s Get:158 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
388s Get:159 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu1 [172 kB]
388s Get:160 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
388s Get:161 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB]
388s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.2-1 [28.4 MB]
389s Get:163 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-1 [96.4 kB]
389s Get:164 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-1 [2486 B]
389s Get:165 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB]
389s Get:166 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
389s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB]
389s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3 [78.7 kB]
389s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB]
390s Get:170 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.2-2 [179 kB]
390s Get:171 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB]
390s Get:172 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB]
390s Get:173 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB]
390s Get:174 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.2-1 [4340 B]
390s Get:175 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
390s Get:176 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB]
390s Get:177 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bdsmatrix arm64 1.3-7-1 [300 kB]
390s Get:178 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.4-1 [1707 kB]
390s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB]
390s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB]
390s Get:181 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB]
390s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB]
390s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
390s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB]
390s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB]
390s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB]
390s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
390s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB]
390s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB]
390s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.4+dfsg-1 [244 kB]
390s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB]
390s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB]
390s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB]
390s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB]
390s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-61-1 [1107 kB]
390s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-class arm64 7.3-22-2build1 [88.3 kB]
390s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB]
390s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-e1071 arm64 1.7-16-1 [563 kB]
390s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-kernsmooth arm64 2.23-24-1 [92.6 kB]
390s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-classint arm64 0.4-10+dfsg-1 [106 kB]
390s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
390s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.13-1-1 [1973 kB]
390s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-collapse arm64 2.0.16-1 [3258 kB]
390s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB]
391s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB]
391s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB]
391s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.0-1 [111 kB]
391s Get:208 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB]
391s Get:209 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-foreign arm64 0.8.87-1 [243 kB]
391s Get:210 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formula all 1.2-5-1 [158 kB]
391s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB]
391s Get:212 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.49+dfsg-1 [544 kB]
391s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
391s Get:214 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB]
391s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
391s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.0+dfsg-1 [286 kB]
391s Get:217 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB]
391s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-intervals arm64 0.15.5-1 [602 kB]
391s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isocodes all 2024.02.12-1 [312 kB]
391s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB]
391s Get:221 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
391s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.48+dfsg-1 [910 kB]
391s Get:223 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB]
391s Get:224 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-zoo arm64 1.8-12-2 [984 kB]
391s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lmtest arm64 0.9.40-1 [396 kB]
391s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-maps arm64 3.4.2-1 [2362 kB]
391s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mapdata arm64 2.3.1-1 [23.5 MB]
392s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-markdown all 1.12+dfsg-2 [179 kB]
392s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-misctools all 0.6-28-1 [99.9 kB]
392s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB]
392s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-maxlik all 1.5-2.1-1 [1083 kB]
392s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.166-1 [2312 kB]
392s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB]
392s Get:234 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rdpack all 2.6.2-1 [757 kB]
392s Get:235 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plm all 2.6-4-1 [2161 kB]
392s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sp arm64 1:2.1-4+dfsg-1 [1472 kB]
392s Get:237 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-terra arm64 1.7-78-1 [3661 kB]
392s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-raster arm64 3.6-30-1 [3128 kB]
392s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
392s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.53-1 [145 kB]
392s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB]
392s Get:242 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB]
392s Get:243 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB]
392s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
392s Get:245 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
392s Get:246 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB]
392s Get:247 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB]
392s Get:248 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rpostgresql arm64 0.7-7+dfsg-1 [364 kB]
392s Get:249 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-wk arm64 0.9.4-1 [1790 kB]
392s Get:250 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-s2 arm64 1.1.7-1 [1987 kB]
392s Get:251 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-units arm64 0.8-5+dfsg-1 [270 kB]
392s Get:252 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sf arm64 1.0-16+dfsg-1build1 [3023 kB]
393s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xts arm64 0.14.0-1 [760 kB]
393s Get:254 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-spacetime all 1.3-2-1 [2776 kB]
393s Preconfiguring packages ...
393s Fetched 288 MB in 10s (27.6 MB/s)
393s Selecting previously unselected package libisl23:arm64.
394s (Reading database ... 
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(Reading database ... 80032 files and directories currently installed.)
394s Preparing to unpack .../000-libisl23_0.27-1_arm64.deb ...
394s Unpacking libisl23:arm64 (0.27-1) ...
394s Selecting previously unselected package libmpc3:arm64.
394s Preparing to unpack .../001-libmpc3_1.3.1-1build2_arm64.deb ...
394s Unpacking libmpc3:arm64 (1.3.1-1build2) ...
394s Selecting previously unselected package cpp-14-aarch64-linux-gnu.
394s Preparing to unpack .../002-cpp-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
394s Selecting previously unselected package cpp-14.
394s Preparing to unpack .../003-cpp-14_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking cpp-14 (14.2.0-8ubuntu1) ...
394s Selecting previously unselected package cpp-aarch64-linux-gnu.
394s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ...
394s Unpacking cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
394s Selecting previously unselected package cpp.
394s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_arm64.deb ...
394s Unpacking cpp (4:14.1.0-2ubuntu1) ...
394s Selecting previously unselected package libcc1-0:arm64.
394s Preparing to unpack .../006-libcc1-0_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking libcc1-0:arm64 (14.2.0-8ubuntu1) ...
394s Selecting previously unselected package libgomp1:arm64.
394s Preparing to unpack .../007-libgomp1_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ...
394s Selecting previously unselected package libitm1:arm64.
394s Preparing to unpack .../008-libitm1_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking libitm1:arm64 (14.2.0-8ubuntu1) ...
394s Selecting previously unselected package libasan8:arm64.
394s Preparing to unpack .../009-libasan8_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking libasan8:arm64 (14.2.0-8ubuntu1) ...
394s Selecting previously unselected package liblsan0:arm64.
394s Preparing to unpack .../010-liblsan0_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking liblsan0:arm64 (14.2.0-8ubuntu1) ...
394s Selecting previously unselected package libtsan2:arm64.
394s Preparing to unpack .../011-libtsan2_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking libtsan2:arm64 (14.2.0-8ubuntu1) ...
394s Selecting previously unselected package libubsan1:arm64.
394s Preparing to unpack .../012-libubsan1_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking libubsan1:arm64 (14.2.0-8ubuntu1) ...
394s Selecting previously unselected package libhwasan0:arm64.
394s Preparing to unpack .../013-libhwasan0_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking libhwasan0:arm64 (14.2.0-8ubuntu1) ...
394s Selecting previously unselected package libgcc-14-dev:arm64.
394s Preparing to unpack .../014-libgcc-14-dev_14.2.0-8ubuntu1_arm64.deb ...
394s Unpacking libgcc-14-dev:arm64 (14.2.0-8ubuntu1) ...
395s Selecting previously unselected package gcc-14-aarch64-linux-gnu.
395s Preparing to unpack .../015-gcc-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ...
395s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
395s Selecting previously unselected package gcc-14.
395s Preparing to unpack .../016-gcc-14_14.2.0-8ubuntu1_arm64.deb ...
395s Unpacking gcc-14 (14.2.0-8ubuntu1) ...
395s Selecting previously unselected package gcc-aarch64-linux-gnu.
395s Preparing to unpack .../017-gcc-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ...
395s Unpacking gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
395s Selecting previously unselected package gcc.
395s Preparing to unpack .../018-gcc_4%3a14.1.0-2ubuntu1_arm64.deb ...
395s Unpacking gcc (4:14.1.0-2ubuntu1) ...
395s Selecting previously unselected package libstdc++-14-dev:arm64.
395s Preparing to unpack .../019-libstdc++-14-dev_14.2.0-8ubuntu1_arm64.deb ...
395s Unpacking libstdc++-14-dev:arm64 (14.2.0-8ubuntu1) ...
395s Selecting previously unselected package g++-14-aarch64-linux-gnu.
395s Preparing to unpack .../020-g++-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ...
395s Unpacking g++-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
395s Selecting previously unselected package g++-14.
395s Preparing to unpack .../021-g++-14_14.2.0-8ubuntu1_arm64.deb ...
395s Unpacking g++-14 (14.2.0-8ubuntu1) ...
395s Selecting previously unselected package g++-aarch64-linux-gnu.
396s Preparing to unpack .../022-g++-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ...
396s Unpacking g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
396s Selecting previously unselected package g++.
396s Preparing to unpack .../023-g++_4%3a14.1.0-2ubuntu1_arm64.deb ...
396s Unpacking g++ (4:14.1.0-2ubuntu1) ...
396s Selecting previously unselected package build-essential.
396s Preparing to unpack .../024-build-essential_12.10ubuntu1_arm64.deb ...
396s Unpacking build-essential (12.10ubuntu1) ...
396s Selecting previously unselected package dctrl-tools.
396s Preparing to unpack .../025-dctrl-tools_2.24-3build3_arm64.deb ...
396s Unpacking dctrl-tools (2.24-3build3) ...
396s Selecting previously unselected package fonts-dejavu-mono.
396s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ...
396s Unpacking fonts-dejavu-mono (2.37-8) ...
396s Selecting previously unselected package fonts-dejavu-core.
396s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ...
396s Unpacking fonts-dejavu-core (2.37-8) ...
396s Selecting previously unselected package fontconfig-config.
396s Preparing to unpack .../028-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ...
396s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
396s Selecting previously unselected package libfontconfig1:arm64.
396s Preparing to unpack .../029-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ...
396s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ...
396s Selecting previously unselected package fontconfig.
396s Preparing to unpack .../030-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ...
396s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
396s Selecting previously unselected package fonts-font-awesome.
396s Preparing to unpack .../031-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
396s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
396s Selecting previously unselected package fonts-glyphicons-halflings.
396s Preparing to unpack .../032-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
396s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
396s Selecting previously unselected package fonts-mathjax.
396s Preparing to unpack .../033-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
396s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
396s Selecting previously unselected package gdal-data.
396s Preparing to unpack .../034-gdal-data_3.9.3+dfsg-1build1_all.deb ...
396s Unpacking gdal-data (3.9.3+dfsg-1build1) ...
396s Selecting previously unselected package gdal-plugins:arm64.
396s Preparing to unpack .../035-gdal-plugins_3.9.3+dfsg-1build1_arm64.deb ...
396s Unpacking gdal-plugins:arm64 (3.9.3+dfsg-1build1) ...
396s Selecting previously unselected package libgfortran5:arm64.
396s Preparing to unpack .../036-libgfortran5_14.2.0-8ubuntu1_arm64.deb ...
396s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ...
396s Selecting previously unselected package libgfortran-14-dev:arm64.
396s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-8ubuntu1_arm64.deb ...
396s Unpacking libgfortran-14-dev:arm64 (14.2.0-8ubuntu1) ...
396s Selecting previously unselected package gfortran-14-aarch64-linux-gnu.
396s Preparing to unpack .../038-gfortran-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ...
396s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
397s Selecting previously unselected package gfortran-14.
397s Preparing to unpack .../039-gfortran-14_14.2.0-8ubuntu1_arm64.deb ...
397s Unpacking gfortran-14 (14.2.0-8ubuntu1) ...
397s Selecting previously unselected package gfortran-aarch64-linux-gnu.
397s Preparing to unpack .../040-gfortran-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ...
397s Unpacking gfortran-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
397s Selecting previously unselected package gfortran.
397s Preparing to unpack .../041-gfortran_4%3a14.1.0-2ubuntu1_arm64.deb ...
397s Unpacking gfortran (4:14.1.0-2ubuntu1) ...
397s Selecting previously unselected package icu-devtools.
397s Preparing to unpack .../042-icu-devtools_74.2-1ubuntu4_arm64.deb ...
397s Unpacking icu-devtools (74.2-1ubuntu4) ...
397s Selecting previously unselected package javascript-common.
397s Preparing to unpack .../043-javascript-common_11+nmu1_all.deb ...
397s Unpacking javascript-common (11+nmu1) ...
397s Selecting previously unselected package libaec0:arm64.
397s Preparing to unpack .../044-libaec0_1.1.3-1_arm64.deb ...
397s Unpacking libaec0:arm64 (1.1.3-1) ...
397s Selecting previously unselected package libaom3:arm64.
397s Preparing to unpack .../045-libaom3_3.11.0-1_arm64.deb ...
397s Unpacking libaom3:arm64 (3.11.0-1) ...
397s Selecting previously unselected package libblas3:arm64.
397s Preparing to unpack .../046-libblas3_3.12.0-3build2_arm64.deb ...
397s Unpacking libblas3:arm64 (3.12.0-3build2) ...
397s Selecting previously unselected package liblapack3:arm64.
397s Preparing to unpack .../047-liblapack3_3.12.0-3build2_arm64.deb ...
397s Unpacking liblapack3:arm64 (3.12.0-3build2) ...
397s Selecting previously unselected package libarpack2t64:arm64.
397s Preparing to unpack .../048-libarpack2t64_3.9.1-1.1ubuntu1_arm64.deb ...
397s Unpacking libarpack2t64:arm64 (3.9.1-1.1ubuntu1) ...
397s Selecting previously unselected package libarmadillo14.
397s Preparing to unpack .../049-libarmadillo14_1%3a14.0.1+dfsg-2build1_arm64.deb ...
397s Unpacking libarmadillo14 (1:14.0.1+dfsg-2build1) ...
397s Selecting previously unselected package libblas-dev:arm64.
397s Preparing to unpack .../050-libblas-dev_3.12.0-3build2_arm64.deb ...
397s Unpacking libblas-dev:arm64 (3.12.0-3build2) ...
397s Selecting previously unselected package libsnappy1v5:arm64.
397s Preparing to unpack .../051-libsnappy1v5_1.2.1-1_arm64.deb ...
397s Unpacking libsnappy1v5:arm64 (1.2.1-1) ...
397s Selecting previously unselected package libblosc1:arm64.
397s Preparing to unpack .../052-libblosc1_1.21.5+ds-1build1_arm64.deb ...
397s Unpacking libblosc1:arm64 (1.21.5+ds-1build1) ...
397s Selecting previously unselected package libbz2-dev:arm64.
397s Preparing to unpack .../053-libbz2-dev_1.0.8-6_arm64.deb ...
397s Unpacking libbz2-dev:arm64 (1.0.8-6) ...
397s Selecting previously unselected package libpixman-1-0:arm64.
397s Preparing to unpack .../054-libpixman-1-0_0.44.0-3_arm64.deb ...
397s Unpacking libpixman-1-0:arm64 (0.44.0-3) ...
397s Selecting previously unselected package libxcb-render0:arm64.
397s Preparing to unpack .../055-libxcb-render0_1.17.0-2_arm64.deb ...
397s Unpacking libxcb-render0:arm64 (1.17.0-2) ...
397s Selecting previously unselected package libxcb-shm0:arm64.
397s Preparing to unpack .../056-libxcb-shm0_1.17.0-2_arm64.deb ...
397s Unpacking libxcb-shm0:arm64 (1.17.0-2) ...
397s Selecting previously unselected package libxrender1:arm64.
397s Preparing to unpack .../057-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ...
397s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ...
397s Selecting previously unselected package libcairo2:arm64.
397s Preparing to unpack .../058-libcairo2_1.18.2-2_arm64.deb ...
397s Unpacking libcairo2:arm64 (1.18.2-2) ...
397s Selecting previously unselected package libcfitsio10t64:arm64.
397s Preparing to unpack .../059-libcfitsio10t64_4.4.1-2_arm64.deb ...
397s Unpacking libcfitsio10t64:arm64 (4.4.1-2) ...
397s Selecting previously unselected package libdatrie1:arm64.
397s Preparing to unpack .../060-libdatrie1_0.2.13-3build1_arm64.deb ...
397s Unpacking libdatrie1:arm64 (0.2.13-3build1) ...
397s Selecting previously unselected package libde265-0:arm64.
397s Preparing to unpack .../061-libde265-0_1.0.15-1build4_arm64.deb ...
397s Unpacking libde265-0:arm64 (1.0.15-1build4) ...
398s Selecting previously unselected package libdeflate0:arm64.
398s Preparing to unpack .../062-libdeflate0_1.22-1_arm64.deb ...
398s Unpacking libdeflate0:arm64 (1.22-1) ...
398s Selecting previously unselected package libdeflate-dev:arm64.
398s Preparing to unpack .../063-libdeflate-dev_1.22-1_arm64.deb ...
398s Unpacking libdeflate-dev:arm64 (1.22-1) ...
398s Selecting previously unselected package libfyba0t64:arm64.
398s Preparing to unpack .../064-libfyba0t64_4.1.1-11build1_arm64.deb ...
398s Unpacking libfyba0t64:arm64 (4.1.1-11build1) ...
398s Selecting previously unselected package libminizip1t64:arm64.
398s Preparing to unpack .../065-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ...
398s Unpacking libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
398s Selecting previously unselected package libfreexl1:arm64.
398s Preparing to unpack .../066-libfreexl1_2.0.0-1build2_arm64.deb ...
398s Unpacking libfreexl1:arm64 (2.0.0-1build2) ...
398s Selecting previously unselected package libgeos3.13.0:arm64.
398s Preparing to unpack .../067-libgeos3.13.0_3.13.0-1_arm64.deb ...
398s Unpacking libgeos3.13.0:arm64 (3.13.0-1) ...
398s Selecting previously unselected package libgeos-c1t64:arm64.
398s Preparing to unpack .../068-libgeos-c1t64_3.13.0-1_arm64.deb ...
398s Unpacking libgeos-c1t64:arm64 (3.13.0-1) ...
398s Selecting previously unselected package proj-data.
398s Preparing to unpack .../069-proj-data_9.5.0-1_all.deb ...
398s Unpacking proj-data (9.5.0-1) ...
398s Selecting previously unselected package libjbig0:arm64.
398s Preparing to unpack .../070-libjbig0_2.1-6.1ubuntu2_arm64.deb ...
398s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ...
398s Selecting previously unselected package libjpeg-turbo8:arm64.
398s Preparing to unpack .../071-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ...
398s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
398s Selecting previously unselected package libjpeg8:arm64.
398s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_arm64.deb ...
398s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
398s Selecting previously unselected package liblerc4:arm64.
398s Preparing to unpack .../073-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ...
398s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
398s Selecting previously unselected package libsharpyuv0:arm64.
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404s Selecting previously unselected package r-cran-jsonlite.
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404s Selecting previously unselected package r-cran-glue.
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404s Selecting previously unselected package r-cran-memoise.
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405s Selecting previously unselected package r-cran-pkgkitten.
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406s Selecting previously unselected package r-cran-magrittr.
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406s Selecting previously unselected package r-cran-httpuv.
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406s Selecting previously unselected package r-cran-intervals.
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406s Selecting previously unselected package r-cran-yaml.
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409s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ...
409s Setting up pandoc-data (3.1.11.1-3) ...
409s Setting up libtsan2:arm64 (14.2.0-8ubuntu1) ...
409s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
409s Setting up libisl23:arm64 (0.27-1) ...
409s Setting up libde265-0:arm64 (1.0.15-1build4) ...
409s Setting up libkmlbase1t64:arm64 (1.3.0-12build1) ...
409s Setting up libdeflate-dev:arm64 (1.22-1) ...
409s Setting up node-normalize.css (8.0.1-5) ...
409s Setting up libicu-dev:arm64 (74.2-1ubuntu4) ...
409s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
409s Setting up xdg-utils (1.2.1-0ubuntu1) ...
409s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
409s Setting up libcc1-0:arm64 (14.2.0-8ubuntu1) ...
409s Setting up liblsan0:arm64 (14.2.0-8ubuntu1) ...
409s Setting up libblas-dev:arm64 (3.12.0-3build2) ...
409s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
409s Setting up libsz2:arm64 (1.1.3-1) ...
409s Setting up dctrl-tools (2.24-3build3) ...
409s Setting up libjs-bootstrap (3.4.1+dfsg-3) ...
409s Setting up libitm1:arm64 (14.2.0-8ubuntu1) ...
409s Setting up gdal-plugins:arm64 (3.9.3+dfsg-1build1) ...
410s Setting up libbz2-dev:arm64 (1.0.8-6) ...
410s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
410s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
410s Setting up libice6:arm64 (2:1.1.1-1) ...
410s Setting up libodbcinst2:arm64 (2.3.12-1ubuntu1) ...
410s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ...
410s Setting up liblapack3:arm64 (3.12.0-3build2) ...
410s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
410s Setting up libudunits2-0 (2.2.28-7build1) ...
410s Setting up libarpack2t64:arm64 (3.9.1-1.1ubuntu1) ...
410s Setting up libpcre2-dev:arm64 (10.42-4ubuntu3) ...
410s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ...
410s Setting up libgeos-c1t64:arm64 (3.13.0-1) ...
410s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
410s Setting up libpng-dev:arm64 (1.6.44-2) ...
410s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ...
410s Setting up pkgconf:arm64 (1.8.1-4) ...
410s Setting up libkmldom1t64:arm64 (1.3.0-12build1) ...
410s Setting up libthai0:arm64 (0.1.29-2build1) ...
410s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
410s Setting up pandoc (3.1.11.1+ds-2) ...
410s Setting up liblapack-dev:arm64 (3.12.0-3build2) ...
410s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
410s Setting up libhdf4-0-alt:arm64 (4.3.0-1) ...
410s Setting up librttopo1:arm64 (1.1.0-3build2) ...
410s Setting up libfreexl1:arm64 (2.0.0-1build2) ...
410s Setting up cpp-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
410s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
410s Setting up libarmadillo14 (1:14.0.1+dfsg-2build1) ...
410s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ...
410s Setting up libgcc-14-dev:arm64 (14.2.0-8ubuntu1) ...
410s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ...
410s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ...
410s Setting up libstdc++-14-dev:arm64 (14.2.0-8ubuntu1) ...
410s Setting up libsm6:arm64 (2:1.2.4-1) ...
410s Setting up libgfortran-14-dev:arm64 (14.2.0-8ubuntu1) ...
410s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ...
410s Setting up fontconfig (2.15.0-1.1ubuntu2) ...
412s Regenerating fonts cache... done.
412s Setting up libnetcdf19t64:arm64 (1:4.9.2-6ubuntu1) ...
412s Setting up libxft2:arm64 (2.3.6-1build1) ...
412s Setting up libproj25:arm64 (9.5.0-1) ...
412s Setting up libtk8.6:arm64 (8.6.15-1) ...
412s Setting up libpango-1.0-0:arm64 (1.54.0+ds-3) ...
412s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ...
412s Setting up libkmlengine1t64:arm64 (1.3.0-12build1) ...
412s Setting up libcairo2:arm64 (1.18.2-2) ...
412s Setting up libgeotiff5:arm64 (1.7.3-1) ...
412s Setting up cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
412s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ...
412s Setting up cpp-14 (14.2.0-8ubuntu1) ...
412s Setting up cpp (4:14.1.0-2ubuntu1) ...
412s Setting up libpoppler140:arm64 (24.08.0-3) ...
412s Setting up gcc-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
412s Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-3) ...
412s Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-3) ...
412s Setting up libspatialite8t64:arm64 (5.1.0-3build1) ...
412s Setting up gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
412s Setting up g++-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
412s Setting up gcc-14 (14.2.0-8ubuntu1) ...
412s Setting up r-base-core (4.4.2-1) ...
412s 
412s Creating config file /etc/R/Renviron with new version
412s Setting up r-cran-crayon (1.5.2-1) ...
412s Setting up r-cran-sourcetools (0.1.7-1-1) ...
412s Setting up r-cran-lattice (0.22-6-1) ...
412s Setting up r-cran-nlme (3.1.166-1) ...
412s Setting up r-cran-formula (1.2-5-1) ...
412s Setting up r-cran-intervals (0.15.5-1) ...
412s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
412s Setting up g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
412s Setting up r-cran-isocodes (2024.02.12-1) ...
412s Setting up gfortran-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
412s Setting up r-cran-wk (0.9.4-1) ...
412s Setting up r-cran-commonmark (1.9.1-1) ...
412s Setting up g++-14 (14.2.0-8ubuntu1) ...
412s Setting up r-cran-proxy (0.4-27-1) ...
412s Setting up r-cran-r6 (2.5.1-1) ...
412s Setting up r-cran-pkgkitten (0.2.4-1) ...
412s Setting up gfortran-14 (14.2.0-8ubuntu1) ...
412s Setting up r-cran-magrittr (2.0.3-1) ...
412s Setting up r-cran-rappdirs (0.3.3-1) ...
412s Setting up r-cran-littler (0.3.20-1) ...
412s Setting up r-cran-fs (1.6.4+dfsg-1) ...
412s Setting up r-cran-rcpp (1.0.13-1-1) ...
412s Setting up r-cran-maps (3.4.2-1) ...
412s Setting up r-cran-rlang (1.1.4-1) ...
412s Setting up littler (0.3.20-1) ...
412s Setting up r-cran-xfun (0.49+dfsg-1) ...
412s Setting up r-cran-withr (3.0.2+dfsg-1) ...
412s Setting up r-cran-mime (0.12-2) ...
412s Setting up r-cran-generics (0.1.3-1) ...
412s Setting up r-cran-base64enc (0.1-3-3) ...
412s Setting up r-cran-s2 (1.1.7-1) ...
412s Setting up r-cran-digest (0.6.37-1) ...
412s Setting up r-cran-yaml (2.3.10-1) ...
412s Setting up r-cran-evaluate (1.0.0-1) ...
412s Setting up r-cran-dbi (1.2.3-1) ...
412s Setting up r-cran-highr (0.11+dfsg-1) ...
412s Setting up r-cran-mass (7.3-61-1) ...
412s Setting up r-cran-mapdata (2.3.1-1) ...
412s Setting up r-cran-collapse (2.0.16-1) ...
412s Setting up r-cran-bdsmatrix (1.3-7-1) ...
412s Setting up r-cran-glue (1.7.0-1) ...
412s Setting up r-cran-foreign (0.8.87-1) ...
412s Setting up r-cran-xtable (1:1.8-4-2) ...
412s Setting up r-cran-cli (3.6.3-1) ...
412s Setting up r-cran-rbibutils (2.3-1) ...
412s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
412s Setting up gcc (4:14.1.0-2ubuntu1) ...
412s Setting up r-cran-fastmap (1.2.0-1) ...
412s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ...
412s Setting up r-cran-sp (1:2.1-4+dfsg-1) ...
412s Setting up r-cran-markdown (1.12+dfsg-2) ...
412s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
412s Setting up r-cran-zoo (1.8-12-2) ...
412s Setting up r-cran-units (0.8-5+dfsg-1) ...
412s Setting up r-cran-later (1.3.2+dfsg-1) ...
412s Setting up r-cran-htmltools (0.5.8.1-1) ...
412s Setting up r-cran-tinytex (0.53-1) ...
412s Setting up r-cran-kernsmooth (2.23-24-1) ...
412s Setting up r-cran-knitr (1.48+dfsg-1) ...
412s Setting up g++ (4:14.1.0-2ubuntu1) ...
412s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
412s Setting up r-cran-rpostgresql (0.7-7+dfsg-1) ...
412s Setting up r-cran-cachem (1.1.0-1) ...
412s Setting up r-cran-lmtest (0.9.40-1) ...
412s Setting up r-cran-sass (0.4.9+dfsg-1) ...
412s Setting up build-essential (12.10ubuntu1) ...
412s Setting up r-cran-misctools (0.6-28-1) ...
412s Setting up r-cran-class (7.3-22-2build1) ...
412s Setting up r-cran-sandwich (3.1-1-1) ...
412s Setting up r-cran-fontawesome (0.5.2-1) ...
412s Setting up r-cran-xts (0.14.0-1) ...
412s Setting up r-cran-rdpack (2.6.2-1) ...
412s Setting up gfortran (4:14.1.0-2ubuntu1) ...
412s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
412s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
412s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
412s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
412s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
412s Setting up r-cran-memoise (2.0.1-1) ...
412s Setting up r-cran-promises (1.3.0+dfsg-1) ...
412s Setting up r-cran-e1071 (1.7-16-1) ...
412s Setting up r-cran-maxlik (1.5-2.1-1) ...
412s Setting up r-cran-spacetime (1.3-2-1) ...
412s Setting up r-base-dev (4.4.2-1) ...
412s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
412s Setting up r-cran-plm (2.6-4-1) ...
412s Setting up r-cran-classint (0.4-10+dfsg-1) ...
412s Setting up r-cran-bslib (0.7.0+dfsg-1) ...
412s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
412s Setting up r-cran-shiny (1.9.1+dfsg-1) ...
412s Setting up r-cran-rmarkdown (2.28+dfsg-1) ...
412s Setting up libheif-plugin-aomdec:arm64 (1.19.3-1) ...
412s Setting up libheif-plugin-libde265:arm64 (1.19.3-1) ...
412s Setting up libheif1:arm64 (1.19.3-1) ...
412s Setting up libgdal35:arm64 (3.9.3+dfsg-1build1) ...
412s Setting up r-cran-terra (1.7-78-1) ...
412s Setting up r-cran-sf (1.0-16+dfsg-1build1) ...
412s Setting up r-cran-raster (3.6-30-1) ...
412s Setting up autopkgtest-satdep (0) ...
412s Processing triggers for libc-bin (2.40-1ubuntu3) ...
412s Processing triggers for man-db (2.13.0-1) ...
414s Processing triggers for install-info (7.1.1-1) ...
425s (Reading database ... 98325 files and directories currently installed.)
425s Removing autopkgtest-satdep (0) ...
427s autopkgtest [20:47:45]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
427s autopkgtest [20:47:45]: test pkg-r-autopkgtest: [-----------------------
427s Test: Try to load the R library spacetime
427s 
427s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
427s Copyright (C) 2024 The R Foundation for Statistical Computing
427s Platform: aarch64-unknown-linux-gnu
427s 
427s R is free software and comes with ABSOLUTELY NO WARRANTY.
427s You are welcome to redistribute it under certain conditions.
427s Type 'license()' or 'licence()' for distribution details.
427s 
427s R is a collaborative project with many contributors.
427s Type 'contributors()' for more information and
427s 'citation()' on how to cite R or R packages in publications.
427s 
427s Type 'demo()' for some demos, 'help()' for on-line help, or
427s 'help.start()' for an HTML browser interface to help.
427s Type 'q()' to quit R.
427s 
428s > library('spacetime')
428s > 
428s > 
428s Other tests are currently unsupported!
428s They will be progressively added.
428s autopkgtest [20:47:46]: test pkg-r-autopkgtest: -----------------------]
429s autopkgtest [20:47:47]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
429s pkg-r-autopkgtest    PASS
429s autopkgtest [20:47:47]: @@@@@@@@@@@@@@@@@@@@ summary
429s run-unit-test        FAIL non-zero exit status 1
429s pkg-r-autopkgtest    PASS
440s nova [W] Skipping flock in bos03-arm64
440s Creating nova instance adt-plucky-arm64-r-cran-spacetime-20241123-204038-juju-7f2275-prod-proposed-migration-environment-20-d02bae90-b69f-4799-aa5d-d82875d0a5d9 from image adt/ubuntu-plucky-arm64-server-20241119.img (UUID 254dc414-4366-404b-b85c-a4e26b3194ad)...
440s nova [W] Skipping flock in bos03-arm64
440s Creating nova instance adt-plucky-arm64-r-cran-spacetime-20241123-204038-juju-7f2275-prod-proposed-migration-environment-20-d02bae90-b69f-4799-aa5d-d82875d0a5d9 from image adt/ubuntu-plucky-arm64-server-20241119.img (UUID 254dc414-4366-404b-b85c-a4e26b3194ad)...