0s autopkgtest [11:59:22]: starting date and time: 2025-01-17 11:59:22+0000 0s autopkgtest [11:59:22]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [11:59:22]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.fnk22fhy/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-limma,src:r-bioc-biocgenerics,src:r-cran-seurat --apt-upgrade r-cran-seurat --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-limma/3.62.2+dfsg-1 r-bioc-biocgenerics/0.52.0-2 r-cran-seurat/5.1.0-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-15.secgroup --name adt-plucky-arm64-r-cran-seurat-20250117-115921-juju-7f2275-prod-proposed-migration-environment-15-37298764-ddcd-47a2-b6bd-1cc3ee64b52c --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 134s autopkgtest [12:01:36]: testbed dpkg architecture: arm64 134s autopkgtest [12:01:36]: testbed apt version: 2.9.18 135s autopkgtest [12:01:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup 135s autopkgtest [12:01:37]: testbed release detected to be: None 136s autopkgtest [12:01:38]: updating testbed package index (apt update) 136s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 136s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 136s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 136s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 136s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 136s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.7 kB] 136s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [877 kB] 137s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [177 kB] 137s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [316 kB] 137s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [57.8 kB] 137s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [1078 kB] 137s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [11.2 kB] 137s Fetched 2616 kB in 1s (2476 kB/s) 138s Reading package lists... 139s Reading package lists... 140s Building dependency tree... 140s Reading state information... 141s Calculating upgrade... 142s The following packages will be upgraded: 142s libgudev-1.0-0 usb.ids 142s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 142s Need to get 238 kB of archives. 142s After this operation, 1024 B of additional disk space will be used. 142s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 usb.ids all 2025.01.14-1 [223 kB] 142s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgudev-1.0-0 arm64 1:238-6 [14.9 kB] 143s Fetched 238 kB in 1s (475 kB/s) 143s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 143s Preparing to unpack .../usb.ids_2025.01.14-1_all.deb ... 143s Unpacking usb.ids (2025.01.14-1) over (2024.12.04-1) ... 143s Preparing to unpack .../libgudev-1.0-0_1%3a238-6_arm64.deb ... 143s Unpacking libgudev-1.0-0:arm64 (1:238-6) over (1:238-5ubuntu1) ... 144s Setting up usb.ids (2025.01.14-1) ... 144s Setting up libgudev-1.0-0:arm64 (1:238-6) ... 144s Processing triggers for libc-bin (2.40-4ubuntu1) ... 144s Reading package lists... 144s Building dependency tree... 144s Reading state information... 146s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 146s autopkgtest [12:01:48]: upgrading testbed (apt dist-upgrade and autopurge) 146s Reading package lists... 146s Building dependency tree... 146s Reading state information... 148s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 148s Starting 2 pkgProblemResolver with broken count: 0 148s Done 149s Entering ResolveByKeep 149s 150s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 150s Reading package lists... 151s Building dependency tree... 151s Reading state information... 152s Starting pkgProblemResolver with broken count: 0 152s Starting 2 pkgProblemResolver with broken count: 0 152s Done 153s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 156s autopkgtest [12:01:58]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 156s autopkgtest [12:01:58]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-seurat 159s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (dsc) [3385 B] 159s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (tar) [2064 kB] 159s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (diff) [4724 B] 159s gpgv: Signature made Tue Sep 10 23:46:06 2024 UTC 159s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 159s gpgv: issuer "plessy@debian.org" 159s gpgv: Can't check signature: No public key 159s dpkg-source: warning: cannot verify inline signature for ./r-cran-seurat_5.1.0-1.dsc: no acceptable signature found 159s autopkgtest [12:02:01]: testing package r-cran-seurat version 5.1.0-1 160s autopkgtest [12:02:02]: build not needed 162s autopkgtest [12:02:04]: test run-unit-test: preparing testbed 162s Reading package lists... 163s Building dependency tree... 163s Reading state information... 163s Starting pkgProblemResolver with broken count: 12 163s Starting 2 pkgProblemResolver with broken count: 12 163s Investigating (0) r-bioc-s4vectors:arm64 < none -> 0.42.1+dfsg-2 @un puN Ib > 163s Broken r-bioc-s4vectors:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 54 as a solution to r-bioc-s4vectors:arm64 34 163s Re-Instated r-bioc-biocgenerics:arm64 163s Investigating (0) r-bioc-iranges:arm64 < none -> 2.38.1-1 @un puN Ib > 163s Broken r-bioc-iranges:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-iranges:arm64 24 163s Investigating (0) r-bioc-genomeinfodb:arm64 < none -> 1.40.1+dfsg-1 @un puN Ib > 163s Broken r-bioc-genomeinfodb:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-genomeinfodb:arm64 13 163s Broken r-bioc-genomeinfodb:arm64 Depends on r-bioc-ucsc.utils:arm64 < none | 1.0.0+ds-2 @un uH > (> 1.0.0+ds-1) 163s Considering r-bioc-ucsc.utils:arm64 0 as a solution to r-bioc-genomeinfodb:arm64 13 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-ucsc.utils:arm64 0 as a solution to r-bioc-genomeinfodb:arm64 13 163s Broken r-bioc-genomeinfodb:arm64 Depends on r-bioc-genomeinfodbdata:arm64 < none | 1.2.13-2 @un uH > (>= 1.2.12) 163s Considering r-bioc-genomeinfodbdata:arm64 0 as a solution to r-bioc-genomeinfodb:arm64 13 163s Re-Instated r-bioc-genomeinfodbdata:arm64 163s Investigating (0) r-bioc-genomicranges:arm64 < none -> 1.56.2+dfsg-1 @un puN Ib > 163s Broken r-bioc-genomicranges:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-genomicranges:arm64 11 163s Broken r-bioc-genomicranges:arm64 Depends on r-bioc-xvector:arm64 < none | 0.44.0-1 @un uH > (>= 0.29.2) 163s Considering r-bioc-xvector:arm64 0 as a solution to r-bioc-genomicranges:arm64 11 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-xvector:arm64 0 as a solution to r-bioc-genomicranges:arm64 11 163s Investigating (0) r-bioc-biobase:arm64 < none -> 2.64.0-4 @un puN Ib > 163s Broken r-bioc-biobase:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-biobase:arm64 10 163s Investigating (0) r-bioc-delayedarray:arm64 < none -> 0.30.1+dfsg-1 @un puN Ib > 163s Broken r-bioc-delayedarray:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-delayedarray:arm64 7 163s Broken r-bioc-delayedarray:arm64 Depends on r-bioc-matrixgenerics:arm64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 163s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-delayedarray:arm64 7 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-delayedarray:arm64 7 163s Broken r-bioc-delayedarray:arm64 Depends on r-bioc-s4arrays:arm64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 163s Considering r-bioc-s4arrays:arm64 0 as a solution to r-bioc-delayedarray:arm64 7 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-s4arrays:arm64 0 as a solution to r-bioc-delayedarray:arm64 7 163s Broken r-bioc-delayedarray:arm64 Depends on r-bioc-sparsearray:arm64 < none | 1.4.8+dfsg-1 @un uH > (>= 1.4.8) 163s Considering r-bioc-sparsearray:arm64 0 as a solution to r-bioc-delayedarray:arm64 7 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-sparsearray:arm64 0 as a solution to r-bioc-delayedarray:arm64 7 163s Investigating (0) r-bioc-summarizedexperiment:arm64 < none -> 1.34.0+dfsg-1 @un puN Ib > 163s Broken r-bioc-summarizedexperiment:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-summarizedexperiment:arm64 5 163s Broken r-bioc-summarizedexperiment:arm64 Depends on r-bioc-matrixgenerics:arm64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 163s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-summarizedexperiment:arm64 5 163s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-summarizedexperiment:arm64 5 163s Broken r-bioc-summarizedexperiment:arm64 Depends on r-bioc-s4arrays:arm64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 163s Considering r-bioc-s4arrays:arm64 0 as a solution to r-bioc-summarizedexperiment:arm64 5 163s Considering r-bioc-s4arrays:arm64 0 as a solution to r-bioc-summarizedexperiment:arm64 5 163s Investigating (0) r-bioc-rtracklayer:arm64 < none -> 1.64.0-1 @un puN Ib > 163s Broken r-bioc-rtracklayer:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-rtracklayer:arm64 1 163s Broken r-bioc-rtracklayer:arm64 Depends on r-cran-xml:arm64 < none | 3.99-0.18-1 @un uH > (>= 1.98-0) 163s Considering r-cran-xml:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Re-Instated r-cran-xml:arm64 163s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-xvector:arm64 < none | 0.44.0-1 @un uH > (>= 0.44.0) 163s Considering r-bioc-xvector:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Considering r-bioc-xvector:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-biostrings:arm64 < none | 2.72.1+dfsg-1 @un uH > (>= 2.72.1) 163s Considering r-bioc-biostrings:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-biostrings:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-zlibbioc:arm64 < none | 1.50.0+dfsg-2 @un uH > (>= 1.50.0) 163s Considering r-bioc-zlibbioc:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-zlibbioc:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-rsamtools:arm64 < none | 2.20.0+dfsg-1 @un uH > (>= 2.20.0) 163s Considering r-bioc-rsamtools:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-rsamtools:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-genomicalignments:arm64 < none | 1.40.0-1 @un uH > (>= 1.40.0) 163s Considering r-bioc-genomicalignments:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-genomicalignments:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-biocio:arm64 < none | 1.14.0+dfsg-1 @un uH > (>= 1.14.0) 163s Considering r-bioc-biocio:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-biocio:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Broken r-bioc-rtracklayer:arm64 Depends on r-cran-restfulr:arm64 < none | 0.0.15-1 @un uH > (>= 0.0.13) 163s Considering r-cran-restfulr:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 163s Re-Instated r-cran-rcurl:arm64 163s Re-Instated r-cran-rjson:arm64 163s Re-Instated r-cran-restfulr:arm64 163s Investigating (0) r-bioc-singlecellexperiment:arm64 < none -> 1.26.0+ds-1 @un puN Ib > 163s Broken r-bioc-singlecellexperiment:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-singlecellexperiment:arm64 1 163s Investigating (0) r-bioc-monocle:arm64 < none -> 2.32.0-1 @un puN Ib > 163s Broken r-bioc-monocle:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-monocle:arm64 1 163s Broken r-bioc-monocle:arm64 Depends on r-cran-ddrtree:arm64 < none | 0.1.5-2 @un uH > (>= 0.1.4) 163s Considering r-cran-ddrtree:arm64 0 as a solution to r-bioc-monocle:arm64 1 163s Re-Instated r-cran-ddrtree:arm64 163s Broken r-bioc-monocle:arm64 Depends on r-bioc-hsmmsinglecell:arm64 < none | 1.24.0-1 @un uH > (>= 0.101.5) 163s Considering r-bioc-hsmmsinglecell:arm64 0 as a solution to r-bioc-monocle:arm64 1 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-hsmmsinglecell:arm64 0 as a solution to r-bioc-monocle:arm64 1 163s Broken r-bioc-monocle:arm64 Depends on r-cran-combinat:arm64 < none | 0.0-8-7build1 @un uH > 163s Considering r-cran-combinat:arm64 1 as a solution to r-bioc-monocle:arm64 1 163s Re-Instated r-cran-combinat:arm64 163s Broken r-bioc-monocle:arm64 Depends on r-cran-fastica:arm64 < none | 1.2-7-1 @un uH > 163s Considering r-cran-fastica:arm64 3 as a solution to r-bioc-monocle:arm64 1 163s Re-Instated r-cran-fastica:arm64 163s Broken r-bioc-monocle:arm64 Depends on r-cran-leidenbase:arm64 < none | 0.1.27-1 @un uH > (>= 0.1.9) 163s Considering r-cran-leidenbase:arm64 0 as a solution to r-bioc-monocle:arm64 1 163s Re-Instated r-cran-leidenbase:arm64 163s Broken r-bioc-monocle:arm64 Depends on r-cran-pheatmap:arm64 < none | 1.0.12-2build1 @un uH > 163s Considering r-cran-pheatmap:arm64 1 as a solution to r-bioc-monocle:arm64 1 163s Re-Instated r-cran-pheatmap:arm64 163s Broken r-bioc-monocle:arm64 Depends on r-cran-slam:arm64 < none | 0.1-55-1 @un uH > 163s Considering r-cran-slam:arm64 1 as a solution to r-bioc-monocle:arm64 1 163s Re-Instated r-cran-slam:arm64 163s Broken r-bioc-monocle:arm64 Depends on r-cran-viridis:arm64 < none | 0.6.5-1 @un uH > 163s Considering r-cran-viridis:arm64 2 as a solution to r-bioc-monocle:arm64 1 163s Re-Instated r-cran-viridis:arm64 163s Broken r-bioc-monocle:arm64 Depends on r-bioc-biocviews:arm64 < none | 1.72.0-1 @un uH > 163s Considering r-bioc-biocviews:arm64 1 as a solution to r-bioc-monocle:arm64 1 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-biocviews:arm64 1 as a solution to r-bioc-monocle:arm64 1 163s Investigating (0) r-bioc-deseq2:arm64 < none -> 1.44.0+dfsg-1 @un puN Ib > 163s Broken r-bioc-deseq2:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-deseq2:arm64 1 163s Broken r-bioc-deseq2:arm64 Depends on r-bioc-biocparallel:arm64 < none | 1.38.0-2 @un uH > (>= 1.38.0) 163s Considering r-bioc-biocparallel:arm64 0 as a solution to r-bioc-deseq2:arm64 1 163s Reinst Failed because of protected r-bioc-biocgenerics:arm64 163s Considering r-bioc-biocparallel:arm64 0 as a solution to r-bioc-deseq2:arm64 1 163s Broken r-bioc-deseq2:arm64 Depends on r-cran-locfit:arm64 < none | 1.5-9.10-1 @un uH > 163s Considering r-cran-locfit:arm64 2 as a solution to r-bioc-deseq2:arm64 1 163s Re-Instated r-cran-locfit:arm64 163s Broken r-bioc-deseq2:arm64 Depends on r-bioc-matrixgenerics:arm64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 163s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-deseq2:arm64 1 163s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-deseq2:arm64 1 163s Investigating (0) r-bioc-multtest:arm64 < none -> 2.60.0-1 @un puN Ib > 163s Broken r-bioc-multtest:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 163s Considering r-bioc-biocgenerics:arm64 34 as a solution to r-bioc-multtest:arm64 0 163s Done 163s Some packages could not be installed. This may mean that you have 163s requested an impossible situation or if you are using the unstable 163s distribution that some required packages have not yet been created 163s or been moved out of Incoming. 163s The following information may help to resolve the situation: 163s 163s The following packages have unmet dependencies: 163s r-bioc-biobase : Depends: r-api-bioc-3.19 163s r-bioc-delayedarray : Depends: r-api-bioc-3.19 163s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 163s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 163s Depends: r-bioc-sparsearray (>= 1.4.8) but it is not going to be installed 163s r-bioc-deseq2 : Depends: r-api-bioc-3.19 163s Depends: r-bioc-biocparallel (>= 1.38.0) but it is not going to be installed 163s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 163s r-bioc-genomeinfodb : Depends: r-api-bioc-3.19 163s Depends: r-bioc-ucsc.utils (> 1.0.0+ds-1) but it is not going to be installed 163s r-bioc-genomicranges : Depends: r-api-bioc-3.19 163s Depends: r-bioc-xvector (>= 0.29.2) but it is not going to be installed 163s r-bioc-iranges : Depends: r-api-bioc-3.19 163s r-bioc-monocle : Depends: r-api-bioc-3.19 163s Depends: r-bioc-hsmmsinglecell (>= 0.101.5) but it is not going to be installed 163s Depends: r-bioc-biocviews but it is not going to be installed 163s r-bioc-multtest : Depends: r-api-bioc-3.19 163s r-bioc-rtracklayer : Depends: r-api-bioc-3.19 163s Depends: r-bioc-xvector (>= 0.44.0) but it is not going to be installed 163s Depends: r-bioc-biostrings (>= 2.72.1) but it is not going to be installed 163s Depends: r-bioc-zlibbioc (>= 1.50.0) but it is not going to be installed 163s Depends: r-bioc-rsamtools (>= 2.20.0) but it is not going to be installed 163s Depends: r-bioc-genomicalignments (>= 1.40.0) but it is not going to be installed 163s Depends: r-bioc-biocio (>= 1.14.0) but it is not going to be installed 163s r-bioc-s4vectors : Depends: r-api-bioc-3.19 163s r-bioc-singlecellexperiment : Depends: r-api-bioc-3.19 163s r-bioc-summarizedexperiment : Depends: r-api-bioc-3.19 163s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 163s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 163s E: Unable to correct problems, you have held broken packages. 163s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 164s Reading package lists... 164s Building dependency tree... 164s Reading state information... 165s Starting pkgProblemResolver with broken count: 0 165s Starting 2 pkgProblemResolver with broken count: 0 165s Done 165s The following NEW packages will be installed: 166s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 166s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax 166s javascript-common libaec0 libamd3 libasan8 libblas3 libboost-dev 166s libboost1.83-dev libcairo2 libcolamd3 libdatrie1 libdeflate0 166s libfftw3-double3 libfontconfig1 libgcc-14-dev libgfortran5 libglpk40 166s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 166s libhwasan0 libice6 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 166s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 166s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 166s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 166s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 166s liblerc4 liblsan0 libltdl7 liblua5.4-0 libpango-1.0-0 libpangocairo-1.0-0 166s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 166s libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 libthai-data 166s libthai0 libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 166s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 166s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 166s r-base-core r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio 166s r-bioc-biocparallel r-bioc-biocviews r-bioc-biostrings r-bioc-delayedarray 166s r-bioc-deseq2 r-bioc-genomeinfodb r-bioc-genomeinfodbdata 166s r-bioc-genomicalignments r-bioc-genomicranges r-bioc-graph 166s r-bioc-hsmmsinglecell r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics 166s r-bioc-monocle r-bioc-multtest r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools 166s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 166s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-summarizedexperiment 166s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 166s r-cran-askpass r-cran-base64enc r-cran-beeswarm r-cran-bh r-cran-biocmanager 166s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem 166s r-cran-cairo r-cran-callr r-cran-caret r-cran-catools r-cran-class 166s r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools r-cran-colorspace 166s r-cran-colourpicker r-cran-combinat r-cran-commonmark r-cran-conquer 166s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 166s r-cran-data.table r-cran-ddrtree r-cran-deldir r-cran-deoptimr r-cran-desc 166s r-cran-diagram r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr 166s r-cran-dqrng r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver 166s r-cran-fastdummies r-cran-fastica r-cran-fastmap r-cran-fitdistrplus 166s r-cran-fnn r-cran-fontawesome r-cran-foreach r-cran-formatr r-cran-fs 166s r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply 166s r-cran-gdata r-cran-generics r-cran-ggbeeswarm r-cran-ggplot2 r-cran-ggrastr 166s r-cran-ggrepel r-cran-ggridges r-cran-globals r-cran-glue r-cran-goftest 166s r-cran-gower r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools 166s r-cran-hardhat r-cran-hdf5r r-cran-here r-cran-highr r-cran-htmltools 166s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica r-cran-igraph 166s r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators r-cran-jquerylib 166s r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth r-cran-knitr 166s r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lava 166s r-cran-lazyeval r-cran-leiden r-cran-leidenbase r-cran-lifecycle 166s r-cran-listenv r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate 166s r-cran-magrittr r-cran-mass r-cran-mathjaxr r-cran-matrix 166s r-cran-matrixmodels r-cran-matrixstats r-cran-memoise r-cran-metap 166s r-cran-mgcv r-cran-mime r-cran-miniui r-cran-mixtools r-cran-mnormt 166s r-cran-modelmetrics r-cran-multcomp r-cran-munsell r-cran-mutoss 166s r-cran-mvtnorm r-cran-nlme r-cran-nnet r-cran-numderiv r-cran-openssl 166s r-cran-parallelly r-cran-patchwork r-cran-pbapply r-cran-pheatmap 166s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 166s r-cran-pkgload r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png 166s r-cran-polyclip r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim 166s r-cran-progressr r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr 166s r-cran-qqconf r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils 166s r-cran-r6 r-cran-ragg r-cran-rann r-cran-rappdirs r-cran-rbibutils 166s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcpparmadillo 166s r-cran-rcppeigen r-cran-rcpphnsw r-cran-rcppprogress r-cran-rcpptoml 166s r-cran-rcurl r-cran-rdpack r-cran-recipes r-cran-reshape2 r-cran-restfulr 166s r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown 166s r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra 166s r-cran-rsvd r-cran-rtsne r-cran-runit r-cran-sandwich r-cran-sass 166s r-cran-scales r-cran-scattermore r-cran-sctransform r-cran-segmented 166s r-cran-seurat r-cran-seuratobject r-cran-shape r-cran-shiny r-cran-shinyjs 166s r-cran-sitmo r-cran-slam r-cran-sn r-cran-snow r-cran-sourcetools r-cran-sp 166s r-cran-spam r-cran-sparsem r-cran-spatstat.data r-cran-spatstat.explore 166s r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.sparse 166s r-cran-spatstat.utils r-cran-squarem r-cran-statmod r-cran-stringi 166s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 166s r-cran-testthat r-cran-textshaping r-cran-tfisher r-cran-th.data 166s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange 166s r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-uwot 166s r-cran-vctrs r-cran-vgam r-cran-vipor r-cran-viridis r-cran-viridislite 166s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml 166s r-cran-zoo unzip x11-common xdg-utils zip zlib1g-dev 166s The following packages will be upgraded: 166s gcc-14-base libatomic1 libgcc-s1 libstdc++6 166s 4 upgraded, 370 newly installed, 0 to remove and 127 not upgraded. 166s Need to get 410 MB of archives. 166s After this operation, 1102 MB of additional disk space will be used. 166s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 gcc-14-base arm64 14.2.0-13ubuntu1 [53.0 kB] 166s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libstdc++6 arm64 14.2.0-13ubuntu1 [748 kB] 166s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libatomic1 arm64 14.2.0-13ubuntu1 [11.5 kB] 166s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libgcc-s1 arm64 14.2.0-13ubuntu1 [61.8 kB] 166s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 166s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 167s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 167s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 167s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 167s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 167s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 167s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 167s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 11+nmu1 [5936 B] 167s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 167s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libgomp1 arm64 14.2.0-13ubuntu1 [145 kB] 167s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libsuitesparseconfig7 arm64 1:7.8.3+dfsg-2 [13.1 kB] 167s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd3 arm64 1:7.8.3+dfsg-2 [26.1 kB] 167s Get:18 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libasan8 arm64 14.2.0-13ubuntu1 [2893 kB] 167s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB] 167s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libitm1 arm64 14.2.0-13ubuntu1 [27.8 kB] 167s Get:21 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 liblsan0 arm64 14.2.0-13ubuntu1 [1283 kB] 168s Get:22 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libtsan2 arm64 14.2.0-13ubuntu1 [2686 kB] 168s Get:23 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libubsan1 arm64 14.2.0-13ubuntu1 [1152 kB] 168s Get:24 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libhwasan0 arm64 14.2.0-13ubuntu1 [1598 kB] 168s Get:25 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libgcc-14-dev arm64 14.2.0-13ubuntu1 [2596 kB] 168s Get:26 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libstdc++-14-dev arm64 14.2.0-13ubuntu1 [2502 kB] 168s Get:27 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libboost1.83-dev arm64 1.83.0-4ubuntu2 [10.7 MB] 169s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost-dev arm64 1.83.0.2ubuntu1 [4468 B] 169s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 169s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 169s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 169s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 169s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 169s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolamd3 arm64 1:7.8.3+dfsg-2 [18.2 kB] 169s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 169s Get:36 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 169s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libfftw3-double3 arm64 3.3.10-2fakesync1build1 [392 kB] 169s Get:38 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libgfortran5 arm64 14.2.0-13ubuntu1 [437 kB] 169s Get:39 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libltdl7 arm64 2.5.4-2 [42.8 kB] 169s Get:40 http://ftpmaster.internal/ubuntu plucky/universe arm64 libglpk40 arm64 5.0-1build2 [337 kB] 169s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 169s Get:42 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 169s Get:43 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 169s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-5ubuntu1 [1210 kB] 169s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-5ubuntu1 [56.9 kB] 169s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 169s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 169s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 169s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 169s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 169s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 169s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 169s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 169s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 169s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 169s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 169s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 169s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 169s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 169s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 169s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 169s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 169s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 169s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB] 169s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 169s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 169s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 169s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 169s Get:69 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpango-1.0-0 arm64 1.56.0-3 [237 kB] 169s Get:70 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpangoft2-1.0-0 arm64 1.56.0-3 [49.6 kB] 169s Get:71 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpangocairo-1.0-0 arm64 1.56.0-3 [27.6 kB] 169s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 169s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 169s Get:74 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 169s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 169s Get:76 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 170s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 170s Get:78 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 170s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 170s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 170s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 170s Get:82 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 170s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 170s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu1 [172 kB] 170s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 170s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 170s Get:87 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-base-core arm64 4.4.2-1build1 [28.4 MB] 170s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 170s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 170s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 170s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 170s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 170s Get:93 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 171s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 171s Get:95 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 171s Get:96 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 171s Get:97 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 171s Get:98 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 171s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 171s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 171s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 172s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 172s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 172s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 172s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 172s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cpp11 all 0.5.0-1 [221 kB] 172s Get:107 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 172s Get:108 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-graph arm64 1.84.1-1 [1297 kB] 172s Get:109 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-rbgl arm64 1.82.0+dfsg-2 [562 kB] 172s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xml arm64 3.99-0.18-1 [1745 kB] 172s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bitops arm64 1.0-8-1 [30.1 kB] 172s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcurl arm64 1.98-1.16+dfsg-1 [806 kB] 172s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-runit all 0.4.33-1 [377 kB] 172s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 172s Get:115 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biocviews all 1.74.0-2 [670 kB] 172s Get:116 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-iranges arm64 2.40.1-2 [2303 kB] 172s Get:117 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 172s Get:118 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 172s Get:119 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 172s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-curl arm64 5.2.3+dfsg-1ubuntu1 [180 kB] 172s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB] 172s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 172s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 172s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 172s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-openssl arm64 2.2.0+dfsg-1 [404 kB] 172s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 172s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 173s Get:128 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 173s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 173s Get:130 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-genomeinfodb all 1.42.1+dfsg-2 [3883 kB] 173s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 173s Get:132 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 174s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 174s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-1-1 [4138 kB] 174s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrixstats arm64 1.4.1-1 [503 kB] 174s Get:136 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-matrixgenerics all 1.18.0-2 [446 kB] 174s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 174s Get:138 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 174s Get:139 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-sparsearray arm64 1.6.0+dfsg-2 [1369 kB] 174s Get:140 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 174s Get:141 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 174s Get:142 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 174s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-locfit arm64 1.5-9.10-1 [516 kB] 174s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB] 174s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 174s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.4-1 [1707 kB] 174s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 174s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 174s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 174s Get:150 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-mass arm64 7.3-64-1 [1110 kB] 174s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.166-1 [2312 kB] 174s Get:152 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 174s Get:153 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 174s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 174s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 175s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 175s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 175s Get:158 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 175s Get:159 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 175s Get:160 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 175s Get:161 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 175s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 175s Get:163 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 175s Get:164 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 175s Get:165 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 175s Get:166 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 175s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 175s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 175s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 175s Get:170 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 175s Get:171 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpparmadillo arm64 14.2.2-1-1 [843 kB] 175s Get:172 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-deseq2 arm64 1.46.0+dfsg-2 [1237 kB] 175s Get:173 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-rhtslib arm64 3.2.0+dfsg-2 [1429 kB] 175s Get:174 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-rsamtools arm64 2.22.0+dfsg-2 [3668 kB] 175s Get:175 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-genomicalignments arm64 1.42.0-2 [2164 kB] 175s Get:176 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-hsmmsinglecell all 1.26.0-2 [16.7 MB] 176s Get:177 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB] 176s Get:178 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-limma arm64 3.62.2+dfsg-1 [1968 kB] 176s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vgam arm64 1.1-11-1 [7722 kB] 176s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-irlba arm64 2.3.5.1-4 [295 kB] 176s Get:181 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 176s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ddrtree arm64 0.1.5-2 [138 kB] 176s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-igraph arm64 2.0.3-1 [5020 kB] 176s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plyr arm64 1.8.9-1 [831 kB] 176s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cluster arm64 2.1.8-1 [568 kB] 176s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-combinat all 0.0-8-7build1 [43.1 kB] 176s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastica arm64 1.2-7-1 [43.4 kB] 176s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rtsne arm64 0.17-1 [105 kB] 176s Get:189 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-stringi arm64 1.8.4-1build1 [902 kB] 176s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 177s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-reshape2 arm64 1.4.4-2build1 [110 kB] 177s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-leidenbase arm64 0.1.27-1 [2299 kB] 177s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 177s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 177s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 177s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 177s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 177s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-slam arm64 0.1-55-1 [187 kB] 177s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 177s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 177s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rann arm64 2.6.2-1 [46.2 kB] 177s Get:202 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-monocle arm64 2.34.0-2 [1518 kB] 177s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 178s Get:204 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-multtest arm64 2.62.0-2 [842 kB] 178s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rjson arm64 0.2.23-1 [104 kB] 178s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 178s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 178s Get:208 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-rtracklayer arm64 1.66.0-2 [5218 kB] 178s Get:209 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB] 178s Get:210 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 178s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ape arm64 5.8-1 [2917 kB] 178s Get:212 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 178s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-beeswarm arm64 0.4.0-1 [82.0 kB] 178s Get:214 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 178s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 178s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 178s Get:217 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 178s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 178s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 178s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 178s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 178s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.4+dfsg-1 [244 kB] 178s Get:223 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 178s Get:224 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 178s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 178s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cairo arm64 1.6-2-1 [89.0 kB] 178s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.8.0-1 [395 kB] 178s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.4-1 [352 kB] 178s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 178s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB] 178s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-e1071 arm64 1.7-16-1 [563 kB] 178s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-iterators all 1.0.14-1 [336 kB] 178s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-foreach all 1.5.2-1 [124 kB] 178s Get:234 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-data.table arm64 1.16.4+dfsg-1 [1996 kB] 179s Get:235 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-modelmetrics arm64 1.2.2.2-1build1 [121 kB] 179s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-proc arm64 1.18.5-1 [963 kB] 179s Get:237 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tzdb arm64 0.4.0-2 [512 kB] 179s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-clock arm64 0.7.1-1 [1792 kB] 179s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gower arm64 1.0.1-1 [206 kB] 179s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 179s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rpart arm64 4.1.24-1 [665 kB] 179s Get:242 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nnet arm64 7.3-20-1 [113 kB] 179s Get:243 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shape all 1.4.6.1-1 [749 kB] 179s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diagram all 1.6.5-2 [656 kB] 179s Get:245 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-kernsmooth arm64 2.23-26-1 [93.3 kB] 179s Get:246 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-globals all 0.16.3-1 [120 kB] 179s Get:247 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 179s Get:248 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-parallelly arm64 1.38.0-1 [385 kB] 179s Get:249 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 179s Get:250 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] 179s Get:251 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 179s Get:252 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-progressr all 0.14.0-1 [338 kB] 179s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-squarem all 2021.1-1 [179 kB] 179s Get:254 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lava all 1.7.3+dfsg-1 [2166 kB] 179s Get:255 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-prodlim arm64 2024.06.25-1 [415 kB] 179s Get:256 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ipred arm64 0.9-15-1 [386 kB] 179s Get:257 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-timechange arm64 0.3.0-1 [172 kB] 179s Get:258 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lubridate arm64 1.9.3+dfsg-1 [1010 kB] 179s Get:259 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 179s Get:260 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 179s Get:261 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-timedate arm64 4041.110-1 [1210 kB] 179s Get:262 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 179s Get:263 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-caret arm64 6.0-94+dfsg-1 [3434 kB] 179s Get:264 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-catools arm64 1.18.2-1 [200 kB] 179s Get:265 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.0-1 [111 kB] 179s Get:266 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.49+dfsg-1 [544 kB] 179s Get:267 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 179s Get:268 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 179s Get:269 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 179s Get:270 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 179s Get:271 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.53-1 [145 kB] 179s Get:272 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 179s Get:273 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 179s Get:274 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.0+dfsg-1 [286 kB] 179s Get:275 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 179s Get:276 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 179s Get:277 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 180s Get:278 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB] 180s Get:279 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 180s Get:280 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 180s Get:281 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB] 180s Get:282 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 180s Get:283 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 180s Get:284 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shinyjs all 2.1.0-1 [967 kB] 180s Get:285 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 180s Get:286 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-conquer arm64 1.3.3-1 [440 kB] 180s Get:287 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 180s Get:288 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 180s Get:289 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 180s Get:290 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 180s Get:291 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 180s Get:292 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 180s Get:293 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 180s Get:294 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dotcall64 arm64 1.1-1-1 [38.5 kB] 180s Get:295 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sitmo arm64 2.0.2-1 [129 kB] 180s Get:296 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dqrng arm64 0.3.2+dfsg-1 [157 kB] 180s Get:297 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastdummies all 1.7.4-1 [49.7 kB] 180s Get:298 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fitdistrplus all 1.2-1-1 [2038 kB] 180s Get:299 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fnn arm64 1.1.4.1-1 [125 kB] 180s Get:300 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtools arm64 3.9.5-1 [340 kB] 180s Get:301 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gdata all 3.0.1-1 [491 kB] 180s Get:302 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vipor all 0.4.7-1 [4624 kB] 180s Get:303 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggbeeswarm all 0.7.2-1 [1732 kB] 181s Get:304 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB] 181s Get:305 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-systemfonts arm64 1.1.0-1 [236 kB] 181s Get:306 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-textshaping arm64 0.3.7-2 [91.8 kB] 181s Get:307 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ragg arm64 1.3.3-1 [496 kB] 181s Get:308 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggrastr all 1.0.2-1 [2566 kB] 181s Get:309 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggrepel arm64 0.9.5-2 [251 kB] 181s Get:310 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggridges all 0.5.6-1 [2195 kB] 181s Get:311 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-goftest arm64 1.2-3-1 [60.2 kB] 181s Get:312 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gplots all 3.2.0-1 [484 kB] 181s Get:313 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-hdf5r arm64 1.3.11+dfsg-1 [1974 kB] 182s Get:314 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 182s Get:315 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-here all 1.0.1-2 [50.3 kB] 182s Get:316 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ica all 1.0-3-1 [85.4 kB] 182s Get:317 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-kernlab arm64 0.9-33-1 [1945 kB] 182s Get:318 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpptoml arm64 0.2.2+dfsg-1 [106 kB] 182s Get:319 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-reticulate arm64 1.39.0+dfsg-1 [1224 kB] 182s Get:320 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 182s Get:321 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-zoo arm64 1.8-12-2 [984 kB] 182s Get:322 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lmtest arm64 0.9.40-1 [396 kB] 182s Get:323 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 182s Get:324 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 182s Get:325 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB] 182s Get:326 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rdpack all 2.6.2-1 [757 kB] 182s Get:327 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mnormt arm64 2.1.1-2 [170 kB] 182s Get:328 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sparsem arm64 1.84-2-1 [812 kB] 182s Get:329 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-quantreg arm64 5.99.1-1 [1437 kB] 182s Get:330 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sn all 2.1.1-2 [1815 kB] 182s Get:331 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-mvtnorm arm64 1.3-3-1 [921 kB] 182s Get:332 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 182s Get:333 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plotrix all 3.8-4-1 [1120 kB] 182s Get:334 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-th.data all 1.1-2-2 [8794 kB] 183s Get:335 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB] 183s Get:336 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-multcomp all 1.4-26-2 [699 kB] 183s Get:337 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mutoss all 0.1-13-1 [1123 kB] 183s Get:338 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-robustbase arm64 0.99-4-1-1 [3035 kB] 183s Get:339 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-qqconf arm64 1.3.2+dfsg-1 [155 kB] 183s Get:340 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-metap all 1.11-1 [570 kB] 183s Get:341 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 184s Get:342 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-segmented all 2.1-3-1 [1366 kB] 184s Get:343 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mixtools arm64 2.0.0-1 [1400 kB] 184s Get:344 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-patchwork all 1.3.0-1 [3220 kB] 184s Get:345 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 184s Get:346 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 184s Get:347 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB] 184s Get:348 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-polyclip arm64 1.10-7-1 [113 kB] 184s Get:349 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 184s Get:350 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 184s Get:351 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r.oo all 1.26.0-1 [955 kB] 184s Get:352 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r.utils all 2.12.3-1 [1386 kB] 184s Get:353 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppannoy arm64 0.0.22-1 [231 kB] 184s Get:354 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpphnsw arm64 0.5.0+ds-1 [168 kB] 184s Get:355 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 184s Get:356 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rocr all 1.0-11-3 [456 kB] 184s Get:357 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rspectra arm64 0.16-2-1 [429 kB] 184s Get:358 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rsvd all 1.0.5-1 [3589 kB] 184s Get:359 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scattermore arm64 1.2-1 [329 kB] 184s Get:360 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sctransform arm64 0.4.1-1 [496 kB] 184s Get:361 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sp arm64 1:2.1-4+dfsg-1 [1472 kB] 184s Get:362 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spam arm64 2.11-0-1 [2754 kB] 184s Get:363 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-seuratobject arm64 5.0.2-1 [1740 kB] 185s Get:364 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.utils arm64 3.1-0-1 [380 kB] 185s Get:365 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.data all 3.1-2-1 [4039 kB] 185s Get:366 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.geom arm64 3.2-9-2 [3939 kB] 185s Get:367 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.random arm64 3.2-3-1 [1157 kB] 185s Get:368 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tensor all 1.5-4 [15.7 kB] 185s Get:369 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.sparse arm64 3.0-3-1 [214 kB] 185s Get:370 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.explore arm64 3.2-7-1 [3413 kB] 185s Get:371 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-uwot arm64 0.2.2-1 [915 kB] 185s Get:372 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-seurat arm64 5.1.0-1 [3247 kB] 185s Get:373 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-1 [150 kB] 185s Get:374 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.1.1-1 [1629 kB] 186s Preconfiguring packages ... 187s Fetched 410 MB in 20s (20.5 MB/s) 187s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 187s Preparing to unpack .../gcc-14-base_14.2.0-13ubuntu1_arm64.deb ... 187s Unpacking gcc-14-base:arm64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 187s Setting up gcc-14-base:arm64 (14.2.0-13ubuntu1) ... 187s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 187s Preparing to unpack .../libstdc++6_14.2.0-13ubuntu1_arm64.deb ... 187s Unpacking libstdc++6:arm64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 187s Setting up libstdc++6:arm64 (14.2.0-13ubuntu1) ... 187s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 187s Preparing to unpack .../libatomic1_14.2.0-13ubuntu1_arm64.deb ... 187s Unpacking libatomic1:arm64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 187s Preparing to unpack .../libgcc-s1_14.2.0-13ubuntu1_arm64.deb ... 187s Unpacking libgcc-s1:arm64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 187s Setting up libgcc-s1:arm64 (14.2.0-13ubuntu1) ... 187s Selecting previously unselected package fonts-dejavu-mono. 187s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 187s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 187s Unpacking fonts-dejavu-mono (2.37-8) ... 187s Selecting previously unselected package fonts-dejavu-core. 187s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 187s Unpacking fonts-dejavu-core (2.37-8) ... 187s Selecting previously unselected package fontconfig-config. 187s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 187s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 187s Selecting previously unselected package libfontconfig1:arm64. 187s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 187s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 187s Selecting previously unselected package fontconfig. 188s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 188s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 188s Selecting previously unselected package fonts-font-awesome. 188s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 188s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 188s Selecting previously unselected package fonts-glyphicons-halflings. 188s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 188s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 188s Selecting previously unselected package fonts-mathjax. 188s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 188s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 188s Selecting previously unselected package javascript-common. 188s Preparing to unpack .../008-javascript-common_11+nmu1_all.deb ... 188s Unpacking javascript-common (11+nmu1) ... 188s Selecting previously unselected package libaec0:arm64. 188s Preparing to unpack .../009-libaec0_1.1.3-1_arm64.deb ... 188s Unpacking libaec0:arm64 (1.1.3-1) ... 188s Selecting previously unselected package libgomp1:arm64. 188s Preparing to unpack .../010-libgomp1_14.2.0-13ubuntu1_arm64.deb ... 188s Unpacking libgomp1:arm64 (14.2.0-13ubuntu1) ... 188s Selecting previously unselected package libsuitesparseconfig7:arm64. 188s Preparing to unpack .../011-libsuitesparseconfig7_1%3a7.8.3+dfsg-2_arm64.deb ... 188s Unpacking libsuitesparseconfig7:arm64 (1:7.8.3+dfsg-2) ... 188s Selecting previously unselected package libamd3:arm64. 188s Preparing to unpack .../012-libamd3_1%3a7.8.3+dfsg-2_arm64.deb ... 188s Unpacking libamd3:arm64 (1:7.8.3+dfsg-2) ... 188s Selecting previously unselected package libasan8:arm64. 188s Preparing to unpack .../013-libasan8_14.2.0-13ubuntu1_arm64.deb ... 188s Unpacking libasan8:arm64 (14.2.0-13ubuntu1) ... 188s Selecting previously unselected package libblas3:arm64. 188s Preparing to unpack .../014-libblas3_3.12.0-4_arm64.deb ... 188s Unpacking libblas3:arm64 (3.12.0-4) ... 188s Selecting previously unselected package libitm1:arm64. 188s Preparing to unpack .../015-libitm1_14.2.0-13ubuntu1_arm64.deb ... 188s Unpacking libitm1:arm64 (14.2.0-13ubuntu1) ... 188s Selecting previously unselected package liblsan0:arm64. 188s Preparing to unpack .../016-liblsan0_14.2.0-13ubuntu1_arm64.deb ... 188s Unpacking liblsan0:arm64 (14.2.0-13ubuntu1) ... 188s Selecting previously unselected package libtsan2:arm64. 188s Preparing to unpack .../017-libtsan2_14.2.0-13ubuntu1_arm64.deb ... 188s Unpacking libtsan2:arm64 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libboost1.83-dev:arm64 (1.83.0-4ubuntu2) ... 191s Selecting previously unselected package libboost-dev:arm64. 191s Preparing to unpack .../023-libboost-dev_1.83.0.2ubuntu1_arm64.deb ... 191s Unpacking libboost-dev:arm64 (1.83.0.2ubuntu1) ... 191s Selecting previously unselected package libpixman-1-0:arm64. 191s Preparing to unpack .../024-libpixman-1-0_0.44.0-3_arm64.deb ... 191s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 191s Selecting previously unselected package libxcb-render0:arm64. 191s Preparing to unpack .../025-libxcb-render0_1.17.0-2_arm64.deb ... 191s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 191s Selecting previously unselected package libxcb-shm0:arm64. 191s Preparing to unpack .../026-libxcb-shm0_1.17.0-2_arm64.deb ... 191s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 191s Selecting previously unselected package libxrender1:arm64. 191s Preparing to unpack .../027-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 191s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 191s Selecting previously unselected package libcairo2:arm64. 191s Preparing to unpack .../028-libcairo2_1.18.2-2_arm64.deb ... 191s Unpacking libcairo2:arm64 (1.18.2-2) ... 191s Selecting previously unselected package libcolamd3:arm64. 191s Preparing to unpack .../029-libcolamd3_1%3a7.8.3+dfsg-2_arm64.deb ... 191s Unpacking libcolamd3:arm64 (1:7.8.3+dfsg-2) ... 191s Selecting previously unselected package libdatrie1:arm64. 191s Preparing to unpack .../030-libdatrie1_0.2.13-3build1_arm64.deb ... 191s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 191s Selecting previously unselected package libdeflate0:arm64. 191s Preparing to unpack .../031-libdeflate0_1.23-1_arm64.deb ... 191s Unpacking libdeflate0:arm64 (1.23-1) ... 191s Selecting previously unselected package libfftw3-double3:arm64. 191s Preparing to unpack .../032-libfftw3-double3_3.3.10-2fakesync1build1_arm64.deb ... 191s Unpacking libfftw3-double3:arm64 (3.3.10-2fakesync1build1) ... 191s Selecting previously unselected package libgfortran5:arm64. 191s Preparing to unpack .../033-libgfortran5_14.2.0-13ubuntu1_arm64.deb ... 191s Unpacking libgfortran5:arm64 (14.2.0-13ubuntu1) ... 191s Selecting previously unselected package libltdl7:arm64. 191s Preparing to unpack .../034-libltdl7_2.5.4-2_arm64.deb ... 191s Unpacking libltdl7:arm64 (2.5.4-2) ... 191s Selecting previously unselected package libglpk40:arm64. 191s Preparing to unpack .../035-libglpk40_5.0-1build2_arm64.deb ... 191s Unpacking libglpk40:arm64 (5.0-1build2) ... 191s Selecting previously unselected package libgraphite2-3:arm64. 191s Preparing to unpack .../036-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 191s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 191s Selecting previously unselected package libharfbuzz0b:arm64. 191s Preparing to unpack .../037-libharfbuzz0b_10.2.0-1_arm64.deb ... 191s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 191s Selecting previously unselected package libsz2:arm64. 191s Preparing to unpack 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previously unselected package libjs-microplugin.js. 192s Preparing to unpack .../054-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 192s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 192s Selecting previously unselected package libjs-jquery-selectize.js. 192s Preparing to unpack .../055-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 192s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 192s Selecting previously unselected package libjs-jquery-ui. 192s Preparing to unpack .../056-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 192s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 192s Selecting previously unselected package libjs-json. 192s Preparing to unpack .../057-libjs-json_0~20221030+~1.0.8-1_all.deb ... 192s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 192s Selecting previously unselected package libjs-prettify. 192s Preparing to unpack .../058-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 192s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 192s Selecting previously unselected package liblapack3:arm64. 192s Preparing to unpack .../059-liblapack3_3.12.0-4_arm64.deb ... 192s Unpacking liblapack3:arm64 (3.12.0-4) ... 192s Selecting previously unselected package liblerc4:arm64. 192s Preparing to unpack .../060-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 192s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 192s Selecting previously unselected package liblua5.4-0:arm64. 192s Preparing to unpack .../061-liblua5.4-0_5.4.7-1_arm64.deb ... 192s Unpacking liblua5.4-0:arm64 (5.4.7-1) ... 192s Selecting previously unselected package libthai-data. 192s Preparing to unpack .../062-libthai-data_0.1.29-2build1_all.deb ... 192s Unpacking libthai-data (0.1.29-2build1) ... 192s Selecting previously unselected package libthai0:arm64. 192s Preparing to unpack .../063-libthai0_0.1.29-2build1_arm64.deb ... 192s Unpacking libthai0:arm64 (0.1.29-2build1) ... 192s Selecting previously unselected package libpango-1.0-0:arm64. 192s Preparing to unpack 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Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 193s Selecting previously unselected package libsm6:arm64. 193s Preparing to unpack .../070-libsm6_2%3a1.2.4-1_arm64.deb ... 193s Unpacking libsm6:arm64 (2:1.2.4-1) ... 193s Selecting previously unselected package libtcl8.6:arm64. 193s Preparing to unpack .../071-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 193s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 193s Selecting previously unselected package libjbig0:arm64. 193s Preparing to unpack .../072-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 193s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 193s Selecting previously unselected package libwebp7:arm64. 193s Preparing to unpack .../073-libwebp7_1.5.0-0.1_arm64.deb ... 193s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 193s Selecting previously unselected package libtiff6:arm64. 193s Preparing to unpack .../074-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 193s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 193s Selecting previously unselected package libxft2:arm64. 193s Preparing to unpack .../075-libxft2_2.3.6-1build1_arm64.deb ... 193s Unpacking libxft2:arm64 (2.3.6-1build1) ... 193s Selecting previously unselected package libxss1:arm64. 193s Preparing to unpack .../076-libxss1_1%3a1.2.3-1build3_arm64.deb ... 193s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 193s Selecting previously unselected package libtk8.6:arm64. 193s Preparing to unpack .../077-libtk8.6_8.6.16-1_arm64.deb ... 193s Unpacking libtk8.6:arm64 (8.6.16-1) ... 193s Selecting previously unselected package libxt6t64:arm64. 193s Preparing to unpack .../078-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 193s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 193s Selecting previously unselected package zip. 193s Preparing to unpack .../079-zip_3.0-14ubuntu1_arm64.deb ... 193s Unpacking zip (3.0-14ubuntu1) ... 193s Selecting previously unselected package unzip. 193s Preparing to unpack .../080-unzip_6.0-28ubuntu6_arm64.deb ... 193s Unpacking unzip (6.0-28ubuntu6) ... 193s Selecting previously unselected package xdg-utils. 193s Preparing to unpack .../081-xdg-utils_1.2.1-0ubuntu1_all.deb ... 193s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 193s Selecting previously unselected package r-base-core. 193s Preparing to unpack .../082-r-base-core_4.4.2-1build1_arm64.deb ... 193s Unpacking r-base-core (4.4.2-1build1) ... 194s Selecting previously unselected package r-cran-littler. 194s Preparing to unpack .../083-r-cran-littler_0.3.20-2_arm64.deb ... 194s Unpacking r-cran-littler (0.3.20-2) ... 194s Selecting previously unselected package littler. 194s Preparing to unpack .../084-littler_0.3.20-2_all.deb ... 194s Unpacking littler (0.3.20-2) ... 194s Selecting previously unselected package node-bootstrap-sass. 194s Preparing to unpack .../085-node-bootstrap-sass_3.4.3-2_all.deb ... 194s Unpacking node-bootstrap-sass (3.4.3-2) ... 194s Selecting previously unselected package node-html5shiv. 194s Preparing to unpack .../086-node-html5shiv_3.7.3+dfsg-5_all.deb ... 194s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 194s Selecting previously unselected package node-normalize.css. 194s Preparing to unpack .../087-node-normalize.css_8.0.1-5_all.deb ... 194s Unpacking node-normalize.css (8.0.1-5) ... 194s Selecting previously unselected package pandoc-data. 194s Preparing to unpack .../088-pandoc-data_3.1.11.1-3build1_all.deb ... 194s Unpacking pandoc-data (3.1.11.1-3build1) ... 194s Selecting previously unselected package pandoc. 194s Preparing to unpack .../089-pandoc_3.1.11.1+ds-2_arm64.deb ... 194s Unpacking pandoc (3.1.11.1+ds-2) ... 195s Selecting previously unselected package r-bioc-biocgenerics. 195s Preparing to unpack .../090-r-bioc-biocgenerics_0.52.0-2_all.deb ... 195s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 195s Selecting previously unselected package r-bioc-biobase. 195s Preparing to unpack .../091-r-bioc-biobase_2.66.0-2_arm64.deb ... 195s Unpacking r-bioc-biobase (2.66.0-2) ... 195s Selecting previously unselected package r-bioc-s4vectors. 195s Preparing to unpack .../092-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 195s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 195s Selecting previously unselected package r-bioc-biocio. 195s Preparing to unpack .../093-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 195s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 196s Selecting previously unselected package r-cran-formatr. 196s Preparing to unpack .../094-r-cran-formatr_1.14-2_all.deb ... 196s Unpacking r-cran-formatr (1.14-2) ... 196s Selecting previously unselected package r-cran-lambda.r. 196s Preparing to unpack .../095-r-cran-lambda.r_1.2.4-2build1_all.deb ... 196s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 196s Selecting previously unselected package r-cran-futile.options. 196s Preparing to unpack .../096-r-cran-futile.options_1.0.1-3build1_all.deb ... 196s Unpacking r-cran-futile.options (1.0.1-3build1) ... 196s Selecting previously unselected package r-cran-futile.logger. 196s Preparing to unpack .../097-r-cran-futile.logger_1.4.3-4build1_all.deb ... 196s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 196s Selecting previously unselected package r-cran-snow. 196s Preparing to unpack .../098-r-cran-snow_1%3a0.4.4-2_all.deb ... 196s Unpacking r-cran-snow (1:0.4.4-2) ... 196s Selecting previously unselected package r-cran-codetools. 196s Preparing to unpack .../099-r-cran-codetools_0.2-20-1_all.deb ... 196s Unpacking r-cran-codetools (0.2-20-1) ... 196s Selecting previously unselected package r-cran-bh. 196s Preparing to unpack .../100-r-cran-bh_1.84.0-1_all.deb ... 196s Unpacking r-cran-bh (1.84.0-1) ... 196s Selecting previously unselected package r-cran-cpp11. 196s Preparing to unpack .../101-r-cran-cpp11_0.5.0-1_all.deb ... 196s Unpacking r-cran-cpp11 (0.5.0-1) ... 196s Selecting previously unselected package r-bioc-biocparallel. 196s Preparing to unpack .../102-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 196s Unpacking r-bioc-biocparallel (1.40.0-2) ... 196s Selecting previously unselected package r-bioc-graph. 196s Preparing to unpack .../103-r-bioc-graph_1.84.1-1_arm64.deb ... 196s Unpacking r-bioc-graph (1.84.1-1) ... 196s Selecting previously unselected package r-bioc-rbgl. 196s Preparing to unpack .../104-r-bioc-rbgl_1.82.0+dfsg-2_arm64.deb ... 196s Unpacking r-bioc-rbgl (1.82.0+dfsg-2) ... 196s Selecting previously unselected package r-cran-xml. 196s Preparing to unpack .../105-r-cran-xml_3.99-0.18-1_arm64.deb ... 196s Unpacking r-cran-xml (3.99-0.18-1) ... 196s Selecting previously unselected package r-cran-bitops. 197s Preparing to unpack .../106-r-cran-bitops_1.0-8-1_arm64.deb ... 197s Unpacking r-cran-bitops (1.0-8-1) ... 197s Selecting previously unselected package r-cran-rcurl. 197s Preparing to unpack .../107-r-cran-rcurl_1.98-1.16+dfsg-1_arm64.deb ... 197s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 197s Selecting previously unselected package r-cran-runit. 197s Preparing to unpack .../108-r-cran-runit_0.4.33-1_all.deb ... 197s Unpacking r-cran-runit (0.4.33-1) ... 197s Selecting previously unselected package r-cran-biocmanager. 197s Preparing to unpack .../109-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 197s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 197s Selecting previously unselected package r-bioc-biocviews. 197s Preparing to unpack .../110-r-bioc-biocviews_1.74.0-2_all.deb ... 197s Unpacking r-bioc-biocviews (1.74.0-2) ... 197s Selecting previously unselected package r-bioc-iranges. 197s Preparing to unpack .../111-r-bioc-iranges_2.40.1-2_arm64.deb ... 197s Unpacking r-bioc-iranges (2.40.1-2) ... 197s Selecting previously unselected package zlib1g-dev:arm64. 197s Preparing to unpack .../112-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 197s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 197s Selecting previously unselected package r-bioc-zlibbioc. 197s Preparing to unpack .../113-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 197s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 197s Selecting previously unselected package r-bioc-xvector. 197s Preparing to unpack .../114-r-bioc-xvector_0.46.0-2_arm64.deb ... 197s Unpacking r-bioc-xvector (0.46.0-2) ... 197s Selecting previously unselected package r-cran-curl. 197s Preparing to unpack .../115-r-cran-curl_5.2.3+dfsg-1ubuntu1_arm64.deb ... 197s Unpacking r-cran-curl (5.2.3+dfsg-1ubuntu1) ... 197s Selecting previously unselected package r-cran-jsonlite. 197s Preparing to unpack .../116-r-cran-jsonlite_1.8.9+dfsg-1_arm64.deb ... 197s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 197s Selecting previously unselected package r-cran-mime. 197s Preparing to unpack .../117-r-cran-mime_0.12-2_arm64.deb ... 197s Unpacking r-cran-mime (0.12-2) ... 197s Selecting previously unselected package r-cran-sys. 197s Preparing to unpack .../118-r-cran-sys_3.4.3-1_arm64.deb ... 197s Unpacking r-cran-sys (3.4.3-1) ... 197s Selecting previously unselected package r-cran-askpass. 197s Preparing to unpack .../119-r-cran-askpass_1.2.1-1_arm64.deb ... 197s Unpacking r-cran-askpass (1.2.1-1) ... 198s Selecting previously unselected package r-cran-openssl. 198s Preparing to unpack .../120-r-cran-openssl_2.2.0+dfsg-1_arm64.deb ... 198s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 198s Selecting previously unselected package r-cran-r6. 198s Preparing to unpack .../121-r-cran-r6_2.5.1-1_all.deb ... 198s Unpacking r-cran-r6 (2.5.1-1) ... 198s Selecting previously unselected package r-cran-httr. 198s Preparing to unpack .../122-r-cran-httr_1.4.7+dfsg-1_all.deb ... 198s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 198s Selecting previously unselected package r-bioc-ucsc.utils. 198s Preparing to unpack .../123-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 198s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 198s Selecting previously unselected package r-bioc-genomeinfodbdata. 198s Preparing to unpack .../124-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 198s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 198s Selecting previously unselected package r-bioc-genomeinfodb. 198s Preparing to unpack .../125-r-bioc-genomeinfodb_1.42.1+dfsg-2_all.deb ... 198s Unpacking r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 198s Selecting previously unselected package r-cran-crayon. 198s Preparing to unpack .../126-r-cran-crayon_1.5.2-1_all.deb ... 198s Unpacking r-cran-crayon (1.5.2-1) ... 198s Selecting previously unselected package r-bioc-biostrings. 198s Preparing to unpack .../127-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 198s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 198s Selecting previously unselected package r-cran-lattice. 198s Preparing to unpack .../128-r-cran-lattice_0.22-6-1_arm64.deb ... 198s Unpacking r-cran-lattice (0.22-6-1) ... 198s Selecting previously unselected package r-cran-matrix. 198s Preparing to unpack .../129-r-cran-matrix_1.7-1-1_arm64.deb ... 198s Unpacking r-cran-matrix (1.7-1-1) ... 198s Selecting previously unselected package r-cran-matrixstats. 198s Preparing to unpack .../130-r-cran-matrixstats_1.4.1-1_arm64.deb ... 198s Unpacking r-cran-matrixstats (1.4.1-1) ... 198s Selecting previously unselected package r-bioc-matrixgenerics. 198s Preparing to unpack .../131-r-bioc-matrixgenerics_1.18.0-2_all.deb ... 198s Unpacking r-bioc-matrixgenerics (1.18.0-2) ... 198s Selecting previously unselected package r-cran-abind. 198s Preparing to unpack .../132-r-cran-abind_1.4-8-1_all.deb ... 198s Unpacking r-cran-abind (1.4-8-1) ... 198s Selecting previously unselected package r-bioc-s4arrays. 198s Preparing to unpack .../133-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 198s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 199s Selecting previously unselected package r-bioc-sparsearray. 199s Preparing to unpack .../134-r-bioc-sparsearray_1.6.0+dfsg-2_arm64.deb ... 199s Unpacking r-bioc-sparsearray (1.6.0+dfsg-2) ... 199s Selecting previously unselected package r-bioc-delayedarray. 199s Preparing to unpack .../135-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 199s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 199s Selecting previously unselected package r-bioc-genomicranges. 199s Preparing to unpack .../136-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 199s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 199s Selecting previously unselected package r-bioc-summarizedexperiment. 199s Preparing to unpack .../137-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 199s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 199s Selecting previously unselected package r-cran-locfit. 199s Preparing to unpack .../138-r-cran-locfit_1.5-9.10-1_arm64.deb ... 199s Unpacking r-cran-locfit (1.5-9.10-1) ... 199s Selecting previously unselected package r-cran-cli. 199s Preparing to unpack .../139-r-cran-cli_3.6.3-1_arm64.deb ... 199s Unpacking r-cran-cli (3.6.3-1) ... 199s Selecting previously unselected package r-cran-glue. 199s Preparing to unpack .../140-r-cran-glue_1.8.0-1_arm64.deb ... 199s Unpacking r-cran-glue (1.8.0-1) ... 199s Selecting previously unselected package r-cran-rlang. 199s Preparing to unpack .../141-r-cran-rlang_1.1.4-1_arm64.deb ... 199s Unpacking r-cran-rlang (1.1.4-1) ... 199s Selecting previously unselected package r-cran-lifecycle. 199s Preparing to unpack .../142-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 199s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 199s Selecting previously unselected package r-cran-gtable. 199s Preparing to unpack .../143-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 199s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 199s Selecting previously unselected package r-cran-isoband. 199s Preparing to unpack .../144-r-cran-isoband_0.2.7-1_arm64.deb ... 199s Unpacking r-cran-isoband (0.2.7-1) ... 199s Selecting previously unselected package r-cran-mass. 199s Preparing to unpack .../145-r-cran-mass_7.3-64-1_arm64.deb ... 199s Unpacking r-cran-mass (7.3-64-1) ... 199s Selecting previously unselected package r-cran-nlme. 199s Preparing to unpack .../146-r-cran-nlme_3.1.166-1_arm64.deb ... 199s Unpacking r-cran-nlme (3.1.166-1) ... 199s Selecting previously unselected package r-cran-mgcv. 199s Preparing to unpack .../147-r-cran-mgcv_1.9-1-1_arm64.deb ... 199s Unpacking r-cran-mgcv (1.9-1-1) ... 199s Selecting previously unselected package r-cran-farver. 199s Preparing to unpack .../148-r-cran-farver_2.1.2-1_arm64.deb ... 199s Unpacking r-cran-farver (2.1.2-1) ... 199s Selecting previously unselected package r-cran-labeling. 199s Preparing to unpack .../149-r-cran-labeling_0.4.3-1_all.deb ... 199s Unpacking r-cran-labeling (0.4.3-1) ... 199s Selecting previously unselected package r-cran-colorspace. 199s Preparing to unpack .../150-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 199s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 199s Selecting previously unselected package r-cran-munsell. 199s Preparing to unpack .../151-r-cran-munsell_0.5.1-1_all.deb ... 199s Unpacking r-cran-munsell (0.5.1-1) ... 200s Selecting previously unselected package r-cran-rcolorbrewer. 200s Preparing to unpack .../152-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 200s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 200s Selecting previously unselected package r-cran-viridislite. 200s Preparing to unpack .../153-r-cran-viridislite_0.4.2-2_all.deb ... 200s Unpacking r-cran-viridislite (0.4.2-2) ... 200s Selecting previously unselected package r-cran-scales. 200s Preparing to unpack .../154-r-cran-scales_1.3.0-1_all.deb ... 200s Unpacking r-cran-scales (1.3.0-1) ... 200s Selecting previously unselected package r-cran-fansi. 200s Preparing to unpack .../155-r-cran-fansi_1.0.5-1_arm64.deb ... 200s Unpacking r-cran-fansi (1.0.5-1) ... 200s Selecting previously unselected package r-cran-magrittr. 200s Preparing to unpack .../156-r-cran-magrittr_2.0.3-1_arm64.deb ... 200s Unpacking r-cran-magrittr (2.0.3-1) ... 200s Selecting previously unselected package r-cran-utf8. 200s Preparing to unpack .../157-r-cran-utf8_1.2.4-1_arm64.deb ... 200s Unpacking r-cran-utf8 (1.2.4-1) ... 200s Selecting previously unselected package r-cran-vctrs. 200s Preparing to unpack .../158-r-cran-vctrs_0.6.5-1_arm64.deb ... 200s Unpacking r-cran-vctrs (0.6.5-1) ... 200s Selecting previously unselected package r-cran-pillar. 200s Preparing to unpack .../159-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 200s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 200s Selecting previously unselected package r-cran-pkgconfig. 200s Preparing to unpack .../160-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 200s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 200s Selecting previously unselected package r-cran-tibble. 200s Preparing to unpack .../161-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 200s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 200s Selecting previously unselected package r-cran-withr. 200s Preparing to unpack .../162-r-cran-withr_3.0.2+dfsg-1_all.deb ... 200s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 200s Selecting previously unselected package r-cran-ggplot2. 200s Preparing to unpack .../163-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 200s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 200s Selecting previously unselected package r-cran-pkgkitten. 200s Preparing to unpack .../164-r-cran-pkgkitten_0.2.4-1_all.deb ... 200s Unpacking r-cran-pkgkitten (0.2.4-1) ... 200s Selecting previously unselected package r-cran-rcpp. 200s Preparing to unpack .../165-r-cran-rcpp_1.0.14-1_arm64.deb ... 200s Unpacking r-cran-rcpp (1.0.14-1) ... 200s Selecting previously unselected package r-cran-rcpparmadillo. 200s Preparing to unpack .../166-r-cran-rcpparmadillo_14.2.2-1-1_arm64.deb ... 200s Unpacking r-cran-rcpparmadillo (14.2.2-1-1) ... 200s Selecting previously unselected package r-bioc-deseq2. 200s Preparing to unpack .../167-r-bioc-deseq2_1.46.0+dfsg-2_arm64.deb ... 200s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 201s Selecting previously unselected package r-bioc-rhtslib. 201s Preparing to unpack .../168-r-bioc-rhtslib_3.2.0+dfsg-2_arm64.deb ... 201s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 201s Selecting previously unselected package r-bioc-rsamtools. 201s Preparing to unpack .../169-r-bioc-rsamtools_2.22.0+dfsg-2_arm64.deb ... 201s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 201s Selecting previously unselected package r-bioc-genomicalignments. 201s Preparing to unpack .../170-r-bioc-genomicalignments_1.42.0-2_arm64.deb ... 201s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 201s Selecting previously unselected package r-bioc-hsmmsinglecell. 201s Preparing to unpack .../171-r-bioc-hsmmsinglecell_1.26.0-2_all.deb ... 201s Unpacking r-bioc-hsmmsinglecell (1.26.0-2) ... 201s Selecting previously unselected package r-cran-statmod. 201s Preparing to unpack .../172-r-cran-statmod_1.5.0-1_arm64.deb ... 201s Unpacking r-cran-statmod (1.5.0-1) ... 201s Selecting previously unselected package r-bioc-limma. 201s Preparing to unpack .../173-r-bioc-limma_3.62.2+dfsg-1_arm64.deb ... 201s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 201s Selecting previously unselected package r-cran-vgam. 201s Preparing to unpack .../174-r-cran-vgam_1.1-11-1_arm64.deb ... 201s Unpacking r-cran-vgam (1.1-11-1) ... 201s Selecting previously unselected package r-cran-irlba. 201s Preparing to unpack .../175-r-cran-irlba_2.3.5.1-4_arm64.deb ... 201s Unpacking r-cran-irlba (2.3.5.1-4) ... 201s Selecting previously unselected package r-cran-rcppeigen. 201s Preparing to unpack .../176-r-cran-rcppeigen_0.3.4.0.2-1_arm64.deb ... 201s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 201s Selecting previously unselected package r-cran-ddrtree. 201s Preparing to unpack .../177-r-cran-ddrtree_0.1.5-2_arm64.deb ... 201s Unpacking r-cran-ddrtree (0.1.5-2) ... 201s Selecting previously unselected package r-cran-igraph. 201s Preparing to unpack .../178-r-cran-igraph_2.0.3-1_arm64.deb ... 201s Unpacking r-cran-igraph (2.0.3-1) ... 201s Selecting previously unselected package r-cran-plyr. 201s Preparing to unpack .../179-r-cran-plyr_1.8.9-1_arm64.deb ... 201s Unpacking r-cran-plyr (1.8.9-1) ... 201s Selecting previously unselected package r-cran-cluster. 202s Preparing to unpack .../180-r-cran-cluster_2.1.8-1_arm64.deb ... 202s Unpacking r-cran-cluster (2.1.8-1) ... 202s Selecting previously unselected package r-cran-combinat. 202s Preparing to unpack .../181-r-cran-combinat_0.0-8-7build1_all.deb ... 202s Unpacking r-cran-combinat (0.0-8-7build1) ... 202s Selecting previously unselected package r-cran-fastica. 202s Preparing to unpack .../182-r-cran-fastica_1.2-7-1_arm64.deb ... 202s Unpacking r-cran-fastica (1.2-7-1) ... 202s Selecting previously unselected package r-cran-rtsne. 202s Preparing to unpack .../183-r-cran-rtsne_0.17-1_arm64.deb ... 202s Unpacking r-cran-rtsne (0.17-1) ... 202s Selecting previously unselected package r-cran-stringi. 202s Preparing to unpack .../184-r-cran-stringi_1.8.4-1build1_arm64.deb ... 202s Unpacking r-cran-stringi (1.8.4-1build1) ... 202s Selecting previously unselected package r-cran-stringr. 202s Preparing to unpack .../185-r-cran-stringr_1.5.1-1_all.deb ... 202s Unpacking r-cran-stringr (1.5.1-1) ... 202s Selecting previously unselected package r-cran-reshape2. 202s Preparing to unpack .../186-r-cran-reshape2_1.4.4-2build1_arm64.deb ... 202s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 202s Selecting previously unselected package r-cran-leidenbase. 202s Preparing to unpack .../187-r-cran-leidenbase_0.1.27-1_arm64.deb ... 202s Unpacking r-cran-leidenbase (0.1.27-1) ... 202s Selecting previously unselected package r-cran-generics. 202s Preparing to unpack .../188-r-cran-generics_0.1.3-1_all.deb ... 202s Unpacking r-cran-generics (0.1.3-1) ... 202s Selecting previously unselected package r-cran-tidyselect. 202s Preparing to unpack .../189-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 202s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 202s Selecting previously unselected package r-cran-dplyr. 202s Preparing to unpack .../190-r-cran-dplyr_1.1.4-4_arm64.deb ... 202s Unpacking r-cran-dplyr (1.1.4-4) ... 202s Selecting previously unselected package r-cran-pheatmap. 202s Preparing to unpack .../191-r-cran-pheatmap_1.0.12-2build1_all.deb ... 202s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 202s Selecting previously unselected package r-cran-proxy. 202s Preparing to unpack .../192-r-cran-proxy_0.4-27-1_arm64.deb ... 202s Unpacking r-cran-proxy (0.4-27-1) ... 202s Selecting previously unselected package r-cran-slam. 202s Preparing to unpack .../193-r-cran-slam_0.1-55-1_arm64.deb ... 202s Unpacking r-cran-slam (0.1-55-1) ... 202s Selecting previously unselected package r-cran-gridextra. 202s Preparing to unpack .../194-r-cran-gridextra_2.3-3build1_all.deb ... 202s Unpacking r-cran-gridextra (2.3-3build1) ... 202s Selecting previously unselected package r-cran-viridis. 202s Preparing to unpack .../195-r-cran-viridis_0.6.5-1_all.deb ... 202s Unpacking r-cran-viridis (0.6.5-1) ... 202s Selecting previously unselected package r-cran-rann. 202s Preparing to unpack .../196-r-cran-rann_2.6.2-1_arm64.deb ... 202s Unpacking r-cran-rann (2.6.2-1) ... 202s Selecting previously unselected package r-bioc-monocle. 202s Preparing to unpack .../197-r-bioc-monocle_2.34.0-2_arm64.deb ... 202s Unpacking r-bioc-monocle (2.34.0-2) ... 202s Selecting previously unselected package r-cran-survival. 203s Preparing to unpack .../198-r-cran-survival_3.8-3-1_arm64.deb ... 203s Unpacking r-cran-survival (3.8-3-1) ... 203s Selecting previously unselected package r-bioc-multtest. 203s Preparing to unpack .../199-r-bioc-multtest_2.62.0-2_arm64.deb ... 203s Unpacking r-bioc-multtest (2.62.0-2) ... 203s Selecting previously unselected package r-cran-rjson. 203s Preparing to unpack .../200-r-cran-rjson_0.2.23-1_arm64.deb ... 203s Unpacking r-cran-rjson (0.2.23-1) ... 203s Selecting previously unselected package r-cran-yaml. 203s Preparing to unpack .../201-r-cran-yaml_2.3.10-1_arm64.deb ... 203s Unpacking r-cran-yaml (2.3.10-1) ... 203s Selecting previously unselected package r-cran-restfulr. 203s Preparing to unpack .../202-r-cran-restfulr_0.0.15-1_arm64.deb ... 203s Unpacking r-cran-restfulr (0.0.15-1) ... 203s Selecting previously unselected package r-bioc-rtracklayer. 203s Preparing to unpack .../203-r-bioc-rtracklayer_1.66.0-2_arm64.deb ... 203s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 203s Selecting previously unselected package r-bioc-singlecellexperiment. 203s Preparing to unpack .../204-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ... 203s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ... 203s Selecting previously unselected package r-cran-digest. 203s Preparing to unpack .../205-r-cran-digest_0.6.37-1_arm64.deb ... 203s Unpacking r-cran-digest (0.6.37-1) ... 203s Selecting previously unselected package r-cran-ape. 203s Preparing to unpack .../206-r-cran-ape_5.8-1_arm64.deb ... 203s Unpacking r-cran-ape (5.8-1) ... 203s Selecting previously unselected package r-cran-base64enc. 203s Preparing to unpack .../207-r-cran-base64enc_0.1-3-3_arm64.deb ... 203s Unpacking r-cran-base64enc (0.1-3-3) ... 203s Selecting previously unselected package r-cran-beeswarm. 203s Preparing to unpack .../208-r-cran-beeswarm_0.4.0-1_arm64.deb ... 203s Unpacking r-cran-beeswarm (0.4.0-1) ... 203s Selecting previously unselected package r-cran-bit. 203s Preparing to unpack .../209-r-cran-bit_4.0.5-1_arm64.deb ... 203s Unpacking r-cran-bit (4.0.5-1) ... 203s Selecting previously unselected package r-cran-bit64. 203s Preparing to unpack .../210-r-cran-bit64_4.0.5-1_arm64.deb ... 203s Unpacking r-cran-bit64 (4.0.5-1) ... 203s Selecting previously unselected package r-cran-brio. 203s Preparing to unpack .../211-r-cran-brio_1.1.5-1_arm64.deb ... 203s Unpacking r-cran-brio (1.1.5-1) ... 203s Selecting previously unselected package r-cran-fastmap. 203s Preparing to unpack .../212-r-cran-fastmap_1.2.0-1_arm64.deb ... 203s Unpacking r-cran-fastmap (1.2.0-1) ... 203s Selecting previously unselected package r-cran-cachem. 203s Preparing to unpack .../213-r-cran-cachem_1.1.0-1_arm64.deb ... 203s Unpacking r-cran-cachem (1.1.0-1) ... 203s Selecting previously unselected package r-cran-htmltools. 203s Preparing to unpack .../214-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 203s Unpacking r-cran-htmltools (0.5.8.1-1) ... 204s Selecting previously unselected package r-cran-jquerylib. 204s Preparing to unpack .../215-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 204s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 204s Selecting previously unselected package r-cran-memoise. 204s Preparing to unpack .../216-r-cran-memoise_2.0.1-1_all.deb ... 204s Unpacking r-cran-memoise (2.0.1-1) ... 204s Selecting previously unselected package r-cran-fs. 204s Preparing to unpack .../217-r-cran-fs_1.6.4+dfsg-1_arm64.deb ... 204s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 204s Selecting previously unselected package r-cran-rappdirs. 204s Preparing to unpack .../218-r-cran-rappdirs_0.3.3-1_arm64.deb ... 204s Unpacking r-cran-rappdirs (0.3.3-1) ... 204s Selecting previously unselected package r-cran-sass. 204s Preparing to unpack .../219-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 204s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 204s Selecting previously unselected package r-cran-bslib. 204s Preparing to unpack .../220-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 204s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 204s Selecting previously unselected package r-cran-cairo. 204s Preparing to unpack .../221-r-cran-cairo_1.6-2-1_arm64.deb ... 204s Unpacking r-cran-cairo (1.6-2-1) ... 204s Selecting previously unselected package r-cran-ps. 204s Preparing to unpack .../222-r-cran-ps_1.8.0-1_arm64.deb ... 204s Unpacking r-cran-ps (1.8.0-1) ... 204s Selecting previously unselected package r-cran-processx. 204s Preparing to unpack .../223-r-cran-processx_3.8.4-1_arm64.deb ... 204s Unpacking r-cran-processx (3.8.4-1) ... 204s Selecting previously unselected package r-cran-callr. 204s Preparing to unpack .../224-r-cran-callr_3.7.6-1_all.deb ... 204s Unpacking r-cran-callr (3.7.6-1) ... 204s Selecting previously unselected package r-cran-class. 204s Preparing to unpack .../225-r-cran-class_7.3-23-1_arm64.deb ... 204s Unpacking r-cran-class (7.3-23-1) ... 204s Selecting previously unselected package r-cran-e1071. 204s Preparing to unpack .../226-r-cran-e1071_1.7-16-1_arm64.deb ... 204s Unpacking r-cran-e1071 (1.7-16-1) ... 204s Selecting previously unselected package r-cran-iterators. 204s Preparing to unpack .../227-r-cran-iterators_1.0.14-1_all.deb ... 204s Unpacking r-cran-iterators (1.0.14-1) ... 204s Selecting previously unselected package r-cran-foreach. 204s Preparing to unpack .../228-r-cran-foreach_1.5.2-1_all.deb ... 204s Unpacking r-cran-foreach (1.5.2-1) ... 204s Selecting previously unselected package r-cran-data.table. 204s Preparing to unpack .../229-r-cran-data.table_1.16.4+dfsg-1_arm64.deb ... 204s Unpacking r-cran-data.table (1.16.4+dfsg-1) ... 204s Selecting previously unselected package r-cran-modelmetrics. 205s Preparing to unpack .../230-r-cran-modelmetrics_1.2.2.2-1build1_arm64.deb ... 205s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 205s Selecting previously unselected package r-cran-proc. 205s Preparing to unpack .../231-r-cran-proc_1.18.5-1_arm64.deb ... 205s Unpacking r-cran-proc (1.18.5-1) ... 205s Selecting previously unselected package r-cran-tzdb. 205s Preparing to unpack .../232-r-cran-tzdb_0.4.0-2_arm64.deb ... 205s Unpacking r-cran-tzdb (0.4.0-2) ... 205s Selecting previously unselected package r-cran-clock. 205s Preparing to unpack .../233-r-cran-clock_0.7.1-1_arm64.deb ... 205s Unpacking r-cran-clock (0.7.1-1) ... 205s Selecting previously unselected package r-cran-gower. 205s Preparing to unpack .../234-r-cran-gower_1.0.1-1_arm64.deb ... 205s Unpacking r-cran-gower (1.0.1-1) ... 205s Selecting previously unselected package r-cran-hardhat. 205s Preparing to unpack .../235-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 205s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 205s Selecting previously unselected package r-cran-rpart. 205s Preparing to unpack .../236-r-cran-rpart_4.1.24-1_arm64.deb ... 205s Unpacking r-cran-rpart (4.1.24-1) ... 205s Selecting previously unselected package r-cran-nnet. 205s Preparing to unpack .../237-r-cran-nnet_7.3-20-1_arm64.deb ... 205s Unpacking r-cran-nnet (7.3-20-1) ... 205s Selecting previously unselected package r-cran-shape. 205s Preparing to unpack .../238-r-cran-shape_1.4.6.1-1_all.deb ... 205s Unpacking r-cran-shape (1.4.6.1-1) ... 205s Selecting previously unselected package r-cran-diagram. 205s Preparing to unpack .../239-r-cran-diagram_1.6.5-2_all.deb ... 205s Unpacking r-cran-diagram (1.6.5-2) ... 205s Selecting previously unselected package r-cran-kernsmooth. 205s Preparing to unpack .../240-r-cran-kernsmooth_2.23-26-1_arm64.deb ... 205s Unpacking r-cran-kernsmooth (2.23-26-1) ... 205s Selecting previously unselected package r-cran-globals. 205s Preparing to unpack .../241-r-cran-globals_0.16.3-1_all.deb ... 205s Unpacking r-cran-globals (0.16.3-1) ... 205s Selecting previously unselected package r-cran-listenv. 205s Preparing to unpack .../242-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 205s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 205s Selecting previously unselected package r-cran-parallelly. 205s Preparing to unpack .../243-r-cran-parallelly_1.38.0-1_arm64.deb ... 205s Unpacking r-cran-parallelly (1.38.0-1) ... 205s Selecting previously unselected package r-cran-future. 205s Preparing to unpack .../244-r-cran-future_1.34.0+dfsg-1_all.deb ... 205s Unpacking r-cran-future (1.34.0+dfsg-1) ... 205s Selecting previously unselected package r-cran-future.apply. 205s Preparing to unpack .../245-r-cran-future.apply_1.11.2+dfsg-1_all.deb ... 205s Unpacking r-cran-future.apply (1.11.2+dfsg-1) ... 205s Selecting previously unselected package r-cran-numderiv. 205s Preparing to unpack .../246-r-cran-numderiv_2016.8-1.1-3_all.deb ... 205s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 205s Selecting previously unselected package r-cran-progressr. 205s Preparing to unpack .../247-r-cran-progressr_0.14.0-1_all.deb ... 205s Unpacking r-cran-progressr (0.14.0-1) ... 205s Selecting previously unselected package r-cran-squarem. 205s Preparing to unpack .../248-r-cran-squarem_2021.1-1_all.deb ... 205s Unpacking r-cran-squarem (2021.1-1) ... 206s Selecting previously unselected package r-cran-lava. 206s Preparing to unpack .../249-r-cran-lava_1.7.3+dfsg-1_all.deb ... 206s Unpacking r-cran-lava (1.7.3+dfsg-1) ... 206s Selecting previously unselected package r-cran-prodlim. 206s Preparing to unpack .../250-r-cran-prodlim_2024.06.25-1_arm64.deb ... 206s Unpacking r-cran-prodlim (2024.06.25-1) ... 206s Selecting previously unselected package r-cran-ipred. 206s Preparing to unpack .../251-r-cran-ipred_0.9-15-1_arm64.deb ... 206s Unpacking r-cran-ipred (0.9-15-1) ... 206s Selecting previously unselected package r-cran-timechange. 206s Preparing to unpack .../252-r-cran-timechange_0.3.0-1_arm64.deb ... 206s Unpacking r-cran-timechange (0.3.0-1) ... 206s Selecting previously unselected package r-cran-lubridate. 206s Preparing to unpack .../253-r-cran-lubridate_1.9.3+dfsg-1_arm64.deb ... 206s Unpacking r-cran-lubridate (1.9.3+dfsg-1) ... 206s Selecting previously unselected package r-cran-purrr. 206s Preparing to unpack .../254-r-cran-purrr_1.0.2-1_arm64.deb ... 206s Unpacking r-cran-purrr (1.0.2-1) ... 206s Selecting previously unselected package r-cran-tidyr. 206s Preparing to unpack .../255-r-cran-tidyr_1.3.1-1_arm64.deb ... 206s Unpacking r-cran-tidyr (1.3.1-1) ... 206s Selecting previously unselected package r-cran-timedate. 206s Preparing to unpack .../256-r-cran-timedate_4041.110-1_arm64.deb ... 206s Unpacking r-cran-timedate (4041.110-1) ... 206s Selecting previously unselected package r-cran-recipes. 206s Preparing to unpack .../257-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 206s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 206s Selecting previously unselected package r-cran-caret. 206s Preparing to unpack .../258-r-cran-caret_6.0-94+dfsg-1_arm64.deb ... 206s Unpacking r-cran-caret (6.0-94+dfsg-1) ... 206s Selecting previously unselected package r-cran-catools. 206s Preparing to unpack .../259-r-cran-catools_1.18.2-1_arm64.deb ... 206s Unpacking r-cran-catools (1.18.2-1) ... 206s Selecting previously unselected package r-cran-evaluate. 206s Preparing to unpack .../260-r-cran-evaluate_1.0.0-1_all.deb ... 206s Unpacking r-cran-evaluate (1.0.0-1) ... 206s Selecting previously unselected package r-cran-xfun. 206s Preparing to unpack .../261-r-cran-xfun_0.49+dfsg-1_arm64.deb ... 206s Unpacking r-cran-xfun (0.49+dfsg-1) ... 206s Selecting previously unselected package r-cran-highr. 206s Preparing to unpack .../262-r-cran-highr_0.11+dfsg-1_all.deb ... 206s Unpacking r-cran-highr (0.11+dfsg-1) ... 206s Selecting previously unselected package libjs-mathjax. 206s Preparing to unpack .../263-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 206s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 207s Selecting previously unselected package r-cran-knitr. 207s Preparing to unpack .../264-r-cran-knitr_1.49+dfsg-1_all.deb ... 207s Unpacking r-cran-knitr (1.49+dfsg-1) ... 207s Selecting previously unselected package r-cran-fontawesome. 207s Preparing to unpack .../265-r-cran-fontawesome_0.5.2-1_all.deb ... 207s Unpacking r-cran-fontawesome (0.5.2-1) ... 207s Selecting previously unselected package r-cran-tinytex. 207s Preparing to unpack .../266-r-cran-tinytex_0.53-1_all.deb ... 207s Unpacking r-cran-tinytex (0.53-1) ... 207s Selecting previously unselected package libjs-modernizr. 207s Preparing to unpack .../267-libjs-modernizr_3.13.0-0.1_all.deb ... 207s Unpacking libjs-modernizr (3.13.0-0.1) ... 207s Selecting previously unselected package r-cran-later. 207s Preparing to unpack .../268-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 207s Unpacking r-cran-later (1.3.2+dfsg-1) ... 207s Selecting previously unselected package r-cran-promises. 207s Preparing to unpack .../269-r-cran-promises_1.3.0+dfsg-1_arm64.deb ... 207s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 208s Selecting previously unselected package r-cran-httpuv. 208s Preparing to unpack .../270-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 208s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 208s Selecting previously unselected package r-cran-xtable. 208s Preparing to unpack .../271-r-cran-xtable_1%3a1.8-4-2_all.deb ... 208s Unpacking r-cran-xtable (1:1.8-4-2) ... 208s Selecting previously unselected package r-cran-sourcetools. 208s Preparing to unpack .../272-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 208s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 208s Selecting previously unselected package r-cran-commonmark. 208s Preparing to unpack .../273-r-cran-commonmark_1.9.2-2_arm64.deb ... 208s Unpacking r-cran-commonmark (1.9.2-2) ... 208s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 208s Preparing to unpack .../274-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 208s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 208s Selecting previously unselected package r-cran-shiny. 208s Preparing to unpack .../275-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 208s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 208s Selecting previously unselected package r-cran-rmarkdown. 208s Preparing to unpack .../276-r-cran-rmarkdown_2.28+dfsg-1_all.deb ... 208s Unpacking r-cran-rmarkdown (2.28+dfsg-1) ... 208s Selecting previously unselected package r-cran-htmlwidgets. 208s Preparing to unpack .../277-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 208s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 208s Selecting previously unselected package r-cran-miniui. 208s Preparing to unpack .../278-r-cran-miniui_0.1.1.1-3build1_all.deb ... 208s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 208s Selecting previously unselected package r-cran-shinyjs. 208s Preparing to unpack .../279-r-cran-shinyjs_2.1.0-1_all.deb ... 208s Unpacking r-cran-shinyjs (2.1.0-1) ... 208s Selecting previously unselected package r-cran-colourpicker. 208s Preparing to unpack .../280-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 208s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 208s Selecting previously unselected package r-cran-conquer. 208s Preparing to unpack .../281-r-cran-conquer_1.3.3-1_arm64.deb ... 208s Unpacking r-cran-conquer (1.3.3-1) ... 208s Selecting previously unselected package r-cran-cowplot. 208s Preparing to unpack .../282-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 208s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 208s Selecting previously unselected package r-cran-lazyeval. 208s Preparing to unpack .../283-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 208s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 208s Selecting previously unselected package r-cran-crosstalk. 208s Preparing to unpack .../284-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 208s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 208s Selecting previously unselected package r-cran-deldir. 208s Preparing to unpack .../285-r-cran-deldir_2.0-4-1build1_arm64.deb ... 208s Unpacking r-cran-deldir (2.0-4-1build1) ... 209s Selecting previously unselected package r-cran-deoptimr. 209s Preparing to unpack .../286-r-cran-deoptimr_1.1-3-1-1_all.deb ... 209s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 209s Selecting previously unselected package r-cran-desc. 209s Preparing to unpack .../287-r-cran-desc_1.4.3-1_all.deb ... 209s Unpacking r-cran-desc (1.4.3-1) ... 209s Selecting previously unselected package r-cran-diffobj. 209s Preparing to unpack .../288-r-cran-diffobj_0.3.5-1_arm64.deb ... 209s Unpacking r-cran-diffobj (0.3.5-1) ... 209s Selecting previously unselected package r-cran-dotcall64. 209s Preparing to unpack .../289-r-cran-dotcall64_1.1-1-1_arm64.deb ... 209s Unpacking r-cran-dotcall64 (1.1-1-1) ... 209s Selecting previously unselected package r-cran-sitmo. 209s Preparing to unpack .../290-r-cran-sitmo_2.0.2-1_arm64.deb ... 209s Unpacking r-cran-sitmo (2.0.2-1) ... 209s Selecting previously unselected package r-cran-dqrng. 209s Preparing to unpack .../291-r-cran-dqrng_0.3.2+dfsg-1_arm64.deb ... 209s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 209s Selecting previously unselected package r-cran-fastdummies. 209s Preparing to unpack .../292-r-cran-fastdummies_1.7.4-1_all.deb ... 209s Unpacking r-cran-fastdummies (1.7.4-1) ... 209s Selecting previously unselected package r-cran-fitdistrplus. 209s Preparing to unpack .../293-r-cran-fitdistrplus_1.2-1-1_all.deb ... 209s Unpacking r-cran-fitdistrplus (1.2-1-1) ... 209s Selecting previously unselected package r-cran-fnn. 209s Preparing to unpack .../294-r-cran-fnn_1.1.4.1-1_arm64.deb ... 209s Unpacking r-cran-fnn (1.1.4.1-1) ... 209s Selecting previously unselected package r-cran-gtools. 209s Preparing to unpack .../295-r-cran-gtools_3.9.5-1_arm64.deb ... 209s Unpacking r-cran-gtools (3.9.5-1) ... 209s Selecting previously unselected package r-cran-gdata. 209s Preparing to unpack .../296-r-cran-gdata_3.0.1-1_all.deb ... 209s Unpacking r-cran-gdata (3.0.1-1) ... 209s Selecting previously unselected package r-cran-vipor. 209s Preparing to unpack .../297-r-cran-vipor_0.4.7-1_all.deb ... 209s Unpacking r-cran-vipor (0.4.7-1) ... 209s Selecting previously unselected package r-cran-ggbeeswarm. 209s Preparing to unpack .../298-r-cran-ggbeeswarm_0.7.2-1_all.deb ... 209s Unpacking r-cran-ggbeeswarm (0.7.2-1) ... 209s Selecting previously unselected package r-cran-png. 209s Preparing to unpack .../299-r-cran-png_0.1-8-1build2_arm64.deb ... 209s Unpacking r-cran-png (0.1-8-1build2) ... 209s Selecting previously unselected package r-cran-systemfonts. 209s Preparing to unpack .../300-r-cran-systemfonts_1.1.0-1_arm64.deb ... 209s Unpacking r-cran-systemfonts (1.1.0-1) ... 209s Selecting previously unselected package r-cran-textshaping. 209s Preparing to unpack .../301-r-cran-textshaping_0.3.7-2_arm64.deb ... 209s Unpacking r-cran-textshaping (0.3.7-2) ... 209s Selecting previously unselected package r-cran-ragg. 209s Preparing to unpack .../302-r-cran-ragg_1.3.3-1_arm64.deb ... 209s Unpacking r-cran-ragg (1.3.3-1) ... 209s Selecting previously unselected package r-cran-ggrastr. 210s Preparing to unpack .../303-r-cran-ggrastr_1.0.2-1_all.deb ... 210s Unpacking r-cran-ggrastr (1.0.2-1) ... 210s Selecting previously unselected package r-cran-ggrepel. 210s Preparing to unpack .../304-r-cran-ggrepel_0.9.5-2_arm64.deb ... 210s Unpacking r-cran-ggrepel (0.9.5-2) ... 210s Selecting previously unselected package r-cran-ggridges. 210s Preparing to unpack .../305-r-cran-ggridges_0.5.6-1_all.deb ... 210s Unpacking r-cran-ggridges (0.5.6-1) ... 210s Selecting previously unselected package r-cran-goftest. 210s Preparing to unpack .../306-r-cran-goftest_1.2-3-1_arm64.deb ... 210s Unpacking r-cran-goftest (1.2-3-1) ... 210s Selecting previously unselected package r-cran-gplots. 210s Preparing to unpack .../307-r-cran-gplots_3.2.0-1_all.deb ... 210s Unpacking r-cran-gplots (3.2.0-1) ... 210s Selecting previously unselected package r-cran-hdf5r. 210s Preparing to unpack .../308-r-cran-hdf5r_1.3.11+dfsg-1_arm64.deb ... 210s Unpacking r-cran-hdf5r (1.3.11+dfsg-1) ... 210s Selecting previously unselected package r-cran-rprojroot. 210s Preparing to unpack .../309-r-cran-rprojroot_2.0.4-1_all.deb ... 210s Unpacking r-cran-rprojroot (2.0.4-1) ... 210s Selecting previously unselected package r-cran-here. 210s Preparing to unpack .../310-r-cran-here_1.0.1-2_all.deb ... 210s Unpacking r-cran-here (1.0.1-2) ... 210s Selecting previously unselected package r-cran-ica. 210s Preparing to unpack .../311-r-cran-ica_1.0-3-1_all.deb ... 210s Unpacking r-cran-ica (1.0-3-1) ... 210s Selecting previously unselected package r-cran-kernlab. 210s Preparing to unpack .../312-r-cran-kernlab_0.9-33-1_arm64.deb ... 210s Unpacking r-cran-kernlab (0.9-33-1) ... 210s Selecting previously unselected package r-cran-rcpptoml. 210s Preparing to unpack .../313-r-cran-rcpptoml_0.2.2+dfsg-1_arm64.deb ... 210s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 210s Selecting previously unselected package r-cran-reticulate. 210s Preparing to unpack .../314-r-cran-reticulate_1.39.0+dfsg-1_arm64.deb ... 210s Unpacking r-cran-reticulate (1.39.0+dfsg-1) ... 210s Selecting previously unselected package r-cran-leiden. 210s Preparing to unpack .../315-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 210s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 210s Selecting previously unselected package r-cran-zoo. 210s Preparing to unpack .../316-r-cran-zoo_1.8-12-2_arm64.deb ... 210s Unpacking r-cran-zoo (1.8-12-2) ... 210s Selecting previously unselected package r-cran-lmtest. 210s Preparing to unpack .../317-r-cran-lmtest_0.9.40-1_arm64.deb ... 210s Unpacking r-cran-lmtest (0.9.40-1) ... 210s Selecting previously unselected package r-cran-mathjaxr. 210s Preparing to unpack .../318-r-cran-mathjaxr_1.6-0-1_all.deb ... 210s 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(1.42.1+dfsg-2) ... 217s Setting up r-cran-bslib (0.7.0+dfsg-1) ... 217s Setting up r-cran-ragg (1.3.3-1) ... 217s Setting up r-cran-spatstat.explore (3.2-7-1) ... 217s Setting up r-cran-ggrepel (0.9.5-2) ... 217s Setting up r-cran-tidyr (1.3.1-1) ... 217s Setting up r-cran-recipes (1.1.0+dfsg-1) ... 217s Setting up r-cran-mutoss (0.1-13-1) ... 217s Setting up r-cran-ggridges (0.5.6-1) ... 217s Setting up r-cran-ggbeeswarm (0.7.2-1) ... 217s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 217s Setting up r-cran-cowplot (1.1.3+dfsg-1) ... 217s Setting up r-cran-sctransform (0.4.1-1) ... 217s Setting up r-cran-patchwork (1.3.0-1) ... 217s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 217s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 217s Setting up r-cran-caret (6.0-94+dfsg-1) ... 217s Setting up r-cran-shiny (1.9.1+dfsg-1) ... 217s Setting up r-bioc-monocle (2.34.0-2) ... 217s Setting up r-cran-shinyjs (2.1.0-1) ... 217s Setting up r-cran-miniui (0.1.1.1-3build1) ... 217s Setting up r-cran-ggrastr (1.0.2-1) ... 217s Setting up r-cran-rmarkdown (2.28+dfsg-1) ... 217s Setting up r-cran-conquer (1.3.3-1) ... 217s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 217s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 217s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 217s Setting up r-cran-quantreg (5.99.1-1) ... 217s Setting up r-cran-sn (2.1.1-2) ... 217s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... 217s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 217s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 217s Setting up r-cran-tfisher (0.2.0-3) ... 217s Setting up r-bioc-genomicalignments (1.42.0-2) ... 217s Setting up r-cran-metap (1.11-1) ... 217s Setting up r-bioc-rtracklayer (1.66.0-2) ... 217s Setting up r-bioc-singlecellexperiment (1.28.1+ds-2) ... 217s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 217s Setting up r-cran-mixtools (2.0.0-1) ... 217s Setting up r-cran-seurat (5.1.0-1) ... 217s Processing triggers for man-db (2.13.0-1) ... 218s Processing triggers for install-info (7.1.1-1) ... 218s Processing triggers for libc-bin (2.40-4ubuntu1) ... 219s autopkgtest [12:03:01]: test run-unit-test: [----------------------- 220s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 220s BEGIN TEST testthat.R 220s 220s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 220s Copyright (C) 2024 The R Foundation for Statistical Computing 220s Platform: aarch64-unknown-linux-gnu 220s 220s R is free software and comes with ABSOLUTELY NO WARRANTY. 220s You are welcome to redistribute it under certain conditions. 220s Type 'license()' or 'licence()' for distribution details. 220s 220s R is a collaborative project with many contributors. 220s Type 'contributors()' for more information and 220s 'citation()' on how to cite R or R packages in publications. 220s 220s Type 'demo()' for some demos, 'help()' for on-line help, or 220s 'help.start()' for an HTML browser interface to help. 220s Type 'q()' to quit R. 220s 220s > library(testthat) 220s > library(Seurat) 220s Loading required package: SeuratObject 220s Loading required package: sp 222s ‘SeuratObject’ was built under R 4.4.1 but the current version is 222s 4.4.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI 222s for R may have changed 222s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current 222s version is 1.7.1; it is recomended that you reinstall ‘SeuratObject’ as 222s the ABI for ‘Matrix’ may have changed 222s 222s Attaching package: ‘SeuratObject’ 222s 222s The following objects are masked from ‘package:base’: 222s 222s intersect, t 222s 224s > # 224s > # # Run tests for 'v3' 224s > # message('Run tests for v3 assay') 224s > # options(Seurat.object.assay.version = 'v3') 224s > # test_check("Seurat") 224s > 224s > # Run tests for 'v5' 224s > message('Run tests for v5 assay') 224s > options(Seurat.object.assay.version = 'v5') 224s > test_check("Seurat") 224s Run tests for v5 assay 225s | | | 0% | |======================================================================| 100% 296s Performing log-normalization 296s 0% 10 20 30 40 50 60 70 80 90 100% 296s [----|----|----|----|----|----|----|----|----|----| 296s **************************************************| 296s Performing log-normalization 296s 0% 10 20 30 40 50 60 70 80 90 100% 296s [----|----|----|----|----|----|----|----|----|----| 296s **************************************************| 297s Performing log-normalization 297s 0% 10 20 30 40 50 60 70 80 90 100% 297s [----|----|----|----|----|----|----|----|----|----| 297s **************************************************| 306s | | | 0% | |======================================================================| 100% 308s | | | 0% | |======================================================================| 100% 308s | | | 0% | |======================================================================| 100% 340s Performing log-normalization 340s 0% 10 20 30 40 50 60 70 80 90 100% 340s [----|----|----|----|----|----|----|----|----|----| 340s **************************************************| 340s Calculating gene variances 340s 0% 10 20 30 40 50 60 70 80 90 100% 340s [----|----|----|----|----|----|----|----|----|----| 341s **************************************************| 341s Calculating feature variances of standardized and clipped values 341s 0% 10 20 30 40 50 60 70 80 90 100% 341s [----|----|----|----|----|----|----|----|----|----| 341s **************************************************| 341s | | | 0% | |======================================================================| 100% 341s Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck 341s 341s Number of nodes: 80 341s Number of edges: 2045 341s 341s Running Louvain algorithm... 341s 0% 10 20 30 40 50 60 70 80 90 100% 341s [----|----|----|----|----|----|----|----|----|----| 341s **************************************************| 341s Maximum modularity in 10 random starts: -0.0613 341s Number of communities: 64 341s Elapsed time: 0 seconds 341s Performing log-normalization 341s 0% 10 20 30 40 50 60 70 80 90 100% 341s [----|----|----|----|----|----|----|----|----|----| 341s **************************************************| 342s | | | 0% | |======================================================================| 100% 342s | | | 0% | |======================================================================| 100% 343s | | | 0% | |======================================================================| 100% 345s | | | 0% | |======================================================================| 100% 346s | | | 0% | |======================================================================| 100% 346s [ FAIL 0 | WARN 210 | SKIP 32 | PASS 661 ] 346s 346s ══ Skipped tests (32) ══════════════════════════════════════════════════════════ 347s • arrow cannot be loaded (1): 'test_load_10X.R:179:3' 347s • On CRAN (29): 'test_differential_expression.R:307:3', 347s 'test_differential_expression.R:349:3', 347s 'test_differential_expression.R:446:3', 'test_dimensional_reduction.R:55:3', 347s 'test_integratedata.R:111:3', 'test_integration.R:74:3', 347s 'test_integration.R:105:3', 'test_integration.R:136:3', 347s 'test_integration.R:170:3', 'test_integration.R:202:3', 347s 'test_integration.R:234:3', 'test_integration.R:264:3', 347s 'test_integration.R:306:3', 'test_integration.R:335:3', 347s 'test_integration.R:365:3', 'test_integration5.R:38:3', 347s 'test_integration5.R:219:3', 'test_objects.R:6:3', 347s 'test_preprocessing.R:140:3', 'test_preprocessing.R:158:3', 347s 'test_preprocessing.R:433:3', 'test_preprocessing.R:554:3', 347s 'test_read_mtx.R:4:3', 'test_read_mtx.R:18:3', 'test_transferdata.R:65:3', 347s 'test_transferdata.R:88:3', 'test_transferdata.R:100:3', 347s 'test_transferdata.R:112:3', 'test_transferdata.R:128:3' 347s • sf cannot be loaded (2): 'test_spatial.R:115:3', 'test_spatial.R:266:3' 347s 347s [ FAIL 0 | WARN 210 | SKIP 32 | PASS 661 ] 347s > 347s > 347s > 347s autopkgtest [12:05:09]: test run-unit-test: -----------------------] 348s run-unit-test PASS 348s autopkgtest [12:05:10]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 348s autopkgtest [12:05:10]: test pkg-r-autopkgtest: preparing testbed 482s autopkgtest [12:07:24]: testbed dpkg architecture: arm64 483s autopkgtest [12:07:25]: testbed apt version: 2.9.18 483s autopkgtest [12:07:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 483s autopkgtest [12:07:25]: testbed release detected to be: plucky 484s autopkgtest [12:07:26]: updating testbed package index (apt update) 484s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 485s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 485s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 485s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 485s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [877 kB] 485s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.7 kB] 485s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 485s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [177 kB] 485s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [316 kB] 485s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [57.8 kB] 485s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [1078 kB] 485s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [11.2 kB] 485s Fetched 2616 kB in 1s (2541 kB/s) 487s Reading package lists... 487s Reading package lists... 488s Building dependency tree... 488s Reading state information... 489s Calculating upgrade... 490s The following packages will be upgraded: 490s libgudev-1.0-0 usb.ids 490s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 490s Need to get 238 kB of archives. 490s After this operation, 1024 B of additional disk space will be used. 490s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 usb.ids all 2025.01.14-1 [223 kB] 491s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgudev-1.0-0 arm64 1:238-6 [14.9 kB] 491s Fetched 238 kB in 0s (488 kB/s) 492s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 492s Preparing to unpack .../usb.ids_2025.01.14-1_all.deb ... 492s Unpacking usb.ids (2025.01.14-1) over (2024.12.04-1) ... 492s Preparing to unpack .../libgudev-1.0-0_1%3a238-6_arm64.deb ... 492s Unpacking libgudev-1.0-0:arm64 (1:238-6) over (1:238-5ubuntu1) ... 492s Setting up usb.ids (2025.01.14-1) ... 492s Setting up libgudev-1.0-0:arm64 (1:238-6) ... 492s Processing triggers for libc-bin (2.40-4ubuntu1) ... 492s Reading package lists... 492s Building dependency tree... 492s Reading state information... 493s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 493s autopkgtest [12:07:35]: upgrading testbed (apt dist-upgrade and autopurge) 493s Reading package lists... 494s Building dependency tree... 494s Reading state information... 495s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 495s Starting 2 pkgProblemResolver with broken count: 0 495s Done 496s Entering ResolveByKeep 496s 497s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 497s Reading package lists... 498s Building dependency tree... 498s Reading state information... 498s Starting pkgProblemResolver with broken count: 0 498s Starting 2 pkgProblemResolver with broken count: 0 498s Done 499s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 502s Reading package lists... 503s Building dependency tree... 503s Reading state information... 504s Starting pkgProblemResolver with broken count: 10 504s Starting 2 pkgProblemResolver with broken count: 10 504s Investigating (0) r-bioc-s4vectors:arm64 < none -> 0.42.1+dfsg-2 @un puN Ib > 504s Broken r-bioc-s4vectors:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 504s Considering r-bioc-biocgenerics:arm64 45 as a solution to r-bioc-s4vectors:arm64 29 504s Re-Instated r-bioc-biocgenerics:arm64 504s Investigating (0) r-bioc-iranges:arm64 < none -> 2.38.1-1 @un puN Ib > 504s Broken r-bioc-iranges:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 504s Considering r-bioc-biocgenerics:arm64 29 as a solution to r-bioc-iranges:arm64 21 504s Investigating (0) r-bioc-genomeinfodb:arm64 < none -> 1.40.1+dfsg-1 @un puN Ib > 504s Broken r-bioc-genomeinfodb:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 504s Considering r-bioc-biocgenerics:arm64 29 as a solution to r-bioc-genomeinfodb:arm64 11 504s Broken r-bioc-genomeinfodb:arm64 Depends on r-bioc-ucsc.utils:arm64 < none | 1.0.0+ds-2 @un uH > (> 1.0.0+ds-1) 504s Considering r-bioc-ucsc.utils:arm64 0 as a solution to r-bioc-genomeinfodb:arm64 11 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-ucsc.utils:arm64 0 as a solution to r-bioc-genomeinfodb:arm64 11 504s Broken r-bioc-genomeinfodb:arm64 Depends on r-bioc-genomeinfodbdata:arm64 < none | 1.2.13-2 @un uH > (>= 1.2.12) 504s Considering r-bioc-genomeinfodbdata:arm64 0 as a solution to r-bioc-genomeinfodb:arm64 11 504s Re-Instated r-bioc-genomeinfodbdata:arm64 504s Investigating (0) r-bioc-genomicranges:arm64 < none -> 1.56.2+dfsg-1 @un puN Ib > 504s Broken r-bioc-genomicranges:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 504s Considering r-bioc-biocgenerics:arm64 29 as a solution to r-bioc-genomicranges:arm64 8 504s Broken r-bioc-genomicranges:arm64 Depends on r-bioc-xvector:arm64 < none | 0.44.0-1 @un uH > (>= 0.29.2) 504s Considering r-bioc-xvector:arm64 0 as a solution to r-bioc-genomicranges:arm64 8 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-xvector:arm64 0 as a solution to r-bioc-genomicranges:arm64 8 504s Investigating (0) r-bioc-biobase:arm64 < none -> 2.64.0-4 @un puN Ib > 504s Broken r-bioc-biobase:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 504s Considering r-bioc-biocgenerics:arm64 29 as a solution to r-bioc-biobase:arm64 7 504s Investigating (0) r-bioc-delayedarray:arm64 < none -> 0.30.1+dfsg-1 @un puN Ib > 504s Broken r-bioc-delayedarray:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 504s Considering r-bioc-biocgenerics:arm64 29 as a solution to r-bioc-delayedarray:arm64 4 504s Broken r-bioc-delayedarray:arm64 Depends on r-bioc-matrixgenerics:arm64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 504s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-delayedarray:arm64 4 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-delayedarray:arm64 4 504s Broken r-bioc-delayedarray:arm64 Depends on r-bioc-s4arrays:arm64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 504s Considering r-bioc-s4arrays:arm64 0 as a solution to r-bioc-delayedarray:arm64 4 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-s4arrays:arm64 0 as a solution to r-bioc-delayedarray:arm64 4 504s Broken r-bioc-delayedarray:arm64 Depends on r-bioc-sparsearray:arm64 < none | 1.4.8+dfsg-1 @un uH > (>= 1.4.8) 504s Considering r-bioc-sparsearray:arm64 0 as a solution to r-bioc-delayedarray:arm64 4 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-sparsearray:arm64 0 as a solution to r-bioc-delayedarray:arm64 4 504s Investigating (0) r-bioc-summarizedexperiment:arm64 < none -> 1.34.0+dfsg-1 @un puN Ib > 504s Broken r-bioc-summarizedexperiment:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 504s Considering r-bioc-biocgenerics:arm64 29 as a solution to r-bioc-summarizedexperiment:arm64 3 504s Broken r-bioc-summarizedexperiment:arm64 Depends on r-bioc-matrixgenerics:arm64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 504s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-summarizedexperiment:arm64 3 504s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-summarizedexperiment:arm64 3 504s Broken r-bioc-summarizedexperiment:arm64 Depends on r-bioc-s4arrays:arm64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 504s Considering r-bioc-s4arrays:arm64 0 as a solution to r-bioc-summarizedexperiment:arm64 3 504s Considering r-bioc-s4arrays:arm64 0 as a solution to r-bioc-summarizedexperiment:arm64 3 504s Investigating (0) r-bioc-rtracklayer:arm64 < none -> 1.64.0-1 @un puN Ib > 504s Broken r-bioc-rtracklayer:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 504s Considering r-bioc-biocgenerics:arm64 29 as a solution to r-bioc-rtracklayer:arm64 1 504s Broken r-bioc-rtracklayer:arm64 Depends on r-cran-xml:arm64 < none | 3.99-0.18-1 @un uH > (>= 1.98-0) 504s Considering r-cran-xml:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Re-Instated r-cran-xml:arm64 504s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-xvector:arm64 < none | 0.44.0-1 @un uH > (>= 0.44.0) 504s Considering r-bioc-xvector:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Considering r-bioc-xvector:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-biostrings:arm64 < none | 2.72.1+dfsg-1 @un uH > (>= 2.72.1) 504s Considering r-bioc-biostrings:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-biostrings:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-zlibbioc:arm64 < none | 1.50.0+dfsg-2 @un uH > (>= 1.50.0) 504s Considering r-bioc-zlibbioc:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-zlibbioc:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-rsamtools:arm64 < none | 2.20.0+dfsg-1 @un uH > (>= 2.20.0) 504s Considering r-bioc-rsamtools:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-rsamtools:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-genomicalignments:arm64 < none | 1.40.0-1 @un uH > (>= 1.40.0) 504s Considering r-bioc-genomicalignments:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-genomicalignments:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Broken r-bioc-rtracklayer:arm64 Depends on r-bioc-biocio:arm64 < none | 1.14.0+dfsg-1 @un uH > (>= 1.14.0) 504s Considering r-bioc-biocio:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-biocio:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Broken r-bioc-rtracklayer:arm64 Depends on r-cran-restfulr:arm64 < none | 0.0.15-1 @un uH > (>= 0.0.13) 504s Considering r-cran-restfulr:arm64 0 as a solution to r-bioc-rtracklayer:arm64 1 504s Re-Instated r-cran-rcurl:arm64 504s Re-Instated r-cran-rjson:arm64 504s Re-Instated r-cran-restfulr:arm64 504s Investigating (0) r-bioc-deseq2:arm64 < none -> 1.44.0+dfsg-1 @un puN Ib > 504s Broken r-bioc-deseq2:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 504s Considering r-bioc-biocgenerics:arm64 29 as a solution to r-bioc-deseq2:arm64 1 504s Broken r-bioc-deseq2:arm64 Depends on r-bioc-biocparallel:arm64 < none | 1.38.0-2 @un uH > (>= 1.38.0) 504s Considering r-bioc-biocparallel:arm64 0 as a solution to r-bioc-deseq2:arm64 1 504s Reinst Failed because of protected r-bioc-biocgenerics:arm64 504s Considering r-bioc-biocparallel:arm64 0 as a solution to r-bioc-deseq2:arm64 1 504s Broken r-bioc-deseq2:arm64 Depends on r-cran-locfit:arm64 < none | 1.5-9.10-1 @un uH > 504s Considering r-cran-locfit:arm64 2 as a solution to r-bioc-deseq2:arm64 1 504s Re-Instated r-cran-locfit:arm64 504s Broken r-bioc-deseq2:arm64 Depends on r-bioc-matrixgenerics:arm64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 504s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-deseq2:arm64 1 504s Considering r-bioc-matrixgenerics:arm64 0 as a solution to r-bioc-deseq2:arm64 1 504s Investigating (0) r-bioc-multtest:arm64 < none -> 2.60.0-1 @un puN Ib > 504s Broken r-bioc-multtest:arm64 Depends on r-api-bioc-3.19:arm64 < none @un H > 504s Considering r-bioc-biocgenerics:arm64 29 as a solution to r-bioc-multtest:arm64 0 504s Done 504s Some packages could not be installed. This may mean that you have 504s requested an impossible situation or if you are using the unstable 504s distribution that some required packages have not yet been created 504s or been moved out of Incoming. 504s The following information may help to resolve the situation: 504s 504s The following packages have unmet dependencies: 505s r-bioc-biobase : Depends: r-api-bioc-3.19 505s r-bioc-delayedarray : Depends: r-api-bioc-3.19 505s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 505s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 505s Depends: r-bioc-sparsearray (>= 1.4.8) but it is not going to be installed 505s r-bioc-deseq2 : Depends: r-api-bioc-3.19 505s Depends: r-bioc-biocparallel (>= 1.38.0) but it is not going to be installed 505s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 505s r-bioc-genomeinfodb : Depends: r-api-bioc-3.19 505s Depends: r-bioc-ucsc.utils (> 1.0.0+ds-1) but it is not going to be installed 505s r-bioc-genomicranges : Depends: r-api-bioc-3.19 505s Depends: r-bioc-xvector (>= 0.29.2) but it is not going to be installed 505s r-bioc-iranges : Depends: r-api-bioc-3.19 505s r-bioc-multtest : Depends: r-api-bioc-3.19 505s r-bioc-rtracklayer : Depends: r-api-bioc-3.19 505s Depends: r-bioc-xvector (>= 0.44.0) but it is not going to be installed 505s Depends: r-bioc-biostrings (>= 2.72.1) but it is not going to be installed 505s Depends: r-bioc-zlibbioc (>= 1.50.0) but it is not going to be installed 505s Depends: r-bioc-rsamtools (>= 2.20.0) but it is not going to be installed 505s Depends: r-bioc-genomicalignments (>= 1.40.0) but it is not going to be installed 505s Depends: r-bioc-biocio (>= 1.14.0) but it is not going to be installed 505s r-bioc-s4vectors : Depends: r-api-bioc-3.19 505s r-bioc-summarizedexperiment : Depends: r-api-bioc-3.19 505s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 505s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 505s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 505s E: Unable to correct problems, you have held broken packages. 506s Reading package lists... 506s Building dependency tree... 506s Reading state information... 507s Starting pkgProblemResolver with broken count: 0 507s Starting 2 pkgProblemResolver with broken count: 0 507s Done 509s The following NEW packages will be installed: 509s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 509s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 509s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 509s g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 509s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 509s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 509s javascript-common libamd3 libasan8 libblas-dev libblas3 libboost-dev 509s libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 libdatrie1 509s libdeflate-dev libdeflate0 libfftw3-double3 libfontconfig1 libgcc-14-dev 509s libgfortran-14-dev libgfortran5 libglpk40 libgomp1 libgraphite2-3 509s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 509s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 509s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 509s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 509s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 509s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 509s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 509s liblsan0 libltdl7 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 509s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 509s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 509s libpixman-1-0 libpkgconf3 libpng-dev libreadline-dev libsharpyuv0 libsm6 509s libstdc++-14-dev libsuitesparseconfig7 libtcl8.6 libthai-data libthai0 509s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 509s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 509s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 509s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-biobase 509s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biostrings 509s r-bioc-delayedarray r-bioc-deseq2 r-bioc-genomeinfodb 509s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicranges 509s r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics r-bioc-multtest 509s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 509s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 509s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 509s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-bitops r-cran-brio 509s r-cran-bslib r-cran-cachem r-cran-callr r-cran-caret r-cran-catools 509s r-cran-class r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools 509s r-cran-colorspace r-cran-colourpicker r-cran-commonmark r-cran-conquer 509s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 509s r-cran-data.table r-cran-deldir r-cran-deoptimr r-cran-desc r-cran-diagram 509s r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr r-cran-dqrng 509s r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastdummies 509s r-cran-fastmap r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome 509s r-cran-foreach r-cran-formatr r-cran-fs r-cran-futile.logger 509s r-cran-futile.options r-cran-future r-cran-future.apply r-cran-gdata 509s r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges r-cran-globals 509s r-cran-glue r-cran-goftest r-cran-gower r-cran-gplots r-cran-gridextra 509s r-cran-gtable r-cran-gtools r-cran-hardhat r-cran-here r-cran-highr 509s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica 509s r-cran-igraph r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators 509s r-cran-jquerylib r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth 509s r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice 509s r-cran-lava r-cran-lazyeval r-cran-leiden r-cran-lifecycle r-cran-listenv 509s r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate r-cran-magrittr 509s r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels 509s r-cran-matrixstats r-cran-memoise r-cran-metap r-cran-mgcv r-cran-mime 509s r-cran-miniui r-cran-mixtools r-cran-mnormt r-cran-modelmetrics 509s r-cran-multcomp r-cran-munsell r-cran-mutoss r-cran-mvtnorm r-cran-nlme 509s r-cran-nnet r-cran-numderiv r-cran-openssl r-cran-parallelly 509s r-cran-patchwork r-cran-pbapply r-cran-pillar r-cran-pkgbuild 509s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plotly 509s r-cran-plotrix r-cran-plyr r-cran-png r-cran-polyclip r-cran-praise 509s r-cran-proc r-cran-processx r-cran-prodlim r-cran-progressr r-cran-promises 509s r-cran-proxy r-cran-ps r-cran-purrr r-cran-qqconf r-cran-quantreg 509s r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rann 509s r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 509s r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw 509s r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl r-cran-rdpack 509s r-cran-recipes r-cran-reshape2 r-cran-restfulr r-cran-reticulate 509s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-robustbase r-cran-rocr 509s r-cran-rpart r-cran-rprojroot r-cran-rspectra r-cran-rsvd r-cran-rtsne 509s r-cran-sandwich r-cran-sass r-cran-scales r-cran-scattermore 509s r-cran-sctransform r-cran-segmented r-cran-seurat r-cran-seuratobject 509s r-cran-shape r-cran-shiny r-cran-shinyjs r-cran-sitmo r-cran-sn r-cran-snow 509s r-cran-sourcetools r-cran-sp r-cran-spam r-cran-sparsem r-cran-spatstat.data 509s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random 509s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-squarem r-cran-statmod 509s r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys r-cran-tensor 509s r-cran-testthat r-cran-tfisher r-cran-th.data r-cran-tibble r-cran-tidyr 509s r-cran-tidyselect r-cran-timechange r-cran-timedate r-cran-tinytex 509s r-cran-tzdb r-cran-utf8 r-cran-uwot r-cran-vctrs r-cran-vgam 509s r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml 509s r-cran-xtable r-cran-yaml r-cran-zoo unzip x11-common xdg-utils zip 509s zlib1g-dev 509s The following packages will be upgraded: 509s gcc-14-base libatomic1 libgcc-s1 libpng16-16t64 libstdc++6 509s 5 upgraded, 385 newly installed, 0 to remove and 126 not upgraded. 509s Need to get 444 MB of archives. 509s After this operation, 1299 MB of additional disk space will be used. 509s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 gcc-14-base arm64 14.2.0-13ubuntu1 [53.0 kB] 510s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libstdc++6 arm64 14.2.0-13ubuntu1 [748 kB] 510s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libatomic1 arm64 14.2.0-13ubuntu1 [11.5 kB] 510s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libgcc-s1 arm64 14.2.0-13ubuntu1 [61.8 kB] 510s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpng16-16t64 arm64 1.6.45-1 [186 kB] 510s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 510s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 510s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [10.6 MB] 510s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 cpp-14 arm64 14.2.0-13ubuntu1 [1030 B] 510s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B] 510s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB] 510s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libcc1-0 arm64 14.2.0-13ubuntu1 [49.6 kB] 510s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libgomp1 arm64 14.2.0-13ubuntu1 [145 kB] 510s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libitm1 arm64 14.2.0-13ubuntu1 [27.8 kB] 510s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libasan8 arm64 14.2.0-13ubuntu1 [2893 kB] 510s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 liblsan0 arm64 14.2.0-13ubuntu1 [1283 kB] 510s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libtsan2 arm64 14.2.0-13ubuntu1 [2686 kB] 510s Get:18 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libubsan1 arm64 14.2.0-13ubuntu1 [1152 kB] 510s Get:19 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libhwasan0 arm64 14.2.0-13ubuntu1 [1598 kB] 510s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libgcc-14-dev arm64 14.2.0-13ubuntu1 [2596 kB] 510s Get:21 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [20.9 MB] 511s Get:22 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 gcc-14 arm64 14.2.0-13ubuntu1 [523 kB] 511s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B] 511s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B] 511s Get:25 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libstdc++-14-dev arm64 14.2.0-13ubuntu1 [2502 kB] 511s Get:26 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [12.1 MB] 511s Get:27 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 g++-14 arm64 14.2.0-13ubuntu1 [21.1 kB] 511s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B] 511s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B] 511s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 511s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 511s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 511s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 511s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 511s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 511s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 511s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 511s Get:38 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 511s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 511s Get:40 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libgfortran5 arm64 14.2.0-13ubuntu1 [437 kB] 511s Get:41 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libgfortran-14-dev arm64 14.2.0-13ubuntu1 [498 kB] 511s Get:42 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [11.4 MB] 512s Get:43 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 gfortran-14 arm64 14.2.0-13ubuntu1 [13.2 kB] 512s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1022 B] 512s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.1.0-2ubuntu1 [1162 B] 512s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 512s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 11+nmu1 [5936 B] 512s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libsuitesparseconfig7 arm64 1:7.8.3+dfsg-2 [13.1 kB] 512s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd3 arm64 1:7.8.3+dfsg-2 [26.1 kB] 512s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB] 512s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.0-4 [120 kB] 512s Get:52 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libboost1.83-dev arm64 1.83.0-4ubuntu2 [10.7 MB] 512s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost-dev arm64 1.83.0.2ubuntu1 [4468 B] 512s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 512s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 512s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 512s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 512s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 512s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 512s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolamd3 arm64 1:7.8.3+dfsg-2 [18.2 kB] 512s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 512s Get:62 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 512s Get:63 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 512s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libfftw3-double3 arm64 3.3.10-2fakesync1build1 [392 kB] 512s Get:65 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libltdl7 arm64 2.5.4-2 [42.8 kB] 512s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 libglpk40 arm64 5.0-1build2 [337 kB] 512s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 512s Get:68 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 512s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 512s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 512s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 512s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 512s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 512s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 512s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 512s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 512s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 512s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 512s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 512s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 513s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 513s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 513s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 513s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 513s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 513s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 513s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 513s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 513s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 513s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 513s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB] 513s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.0-4 [4419 kB] 513s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 513s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 513s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5-2 [385 kB] 513s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 513s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 513s Get:98 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpango-1.0-0 arm64 1.56.0-3 [237 kB] 513s Get:99 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpangoft2-1.0-0 arm64 1.56.0-3 [49.6 kB] 513s Get:100 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpangocairo-1.0-0 arm64 1.56.0-3 [27.6 kB] 513s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 513s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 513s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB] 513s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu3 [187 kB] 513s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu3 [6704 B] 513s Get:106 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.42-4ubuntu3 [694 kB] 514s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 514s Get:108 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 514s Get:109 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpng-dev arm64 1.6.45-1 [271 kB] 514s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 514s Get:111 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 514s Get:112 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 514s Get:113 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 514s Get:114 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 514s Get:115 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 514s Get:116 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 514s Get:117 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 514s Get:118 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 514s Get:119 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 514s Get:120 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 514s Get:121 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu1 [172 kB] 514s Get:122 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 514s Get:123 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 514s Get:124 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-base-core arm64 4.4.2-1build1 [28.4 MB] 515s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 515s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 515s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 515s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 515s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 515s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 515s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 516s Get:132 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.3-1 [180 kB] 516s Get:133 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 516s Get:134 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 516s Get:135 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 516s Get:136 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-base-dev all 4.4.2-1build1 [4342 B] 516s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 516s Get:138 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 516s Get:139 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 516s Get:140 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 516s Get:141 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 516s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 516s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 516s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 516s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 516s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 516s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 516s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 516s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cpp11 all 0.5.0-1 [221 kB] 516s Get:150 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 516s Get:151 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-iranges arm64 2.40.1-2 [2303 kB] 516s Get:152 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 516s Get:153 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 516s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-curl arm64 5.2.3+dfsg-1ubuntu1 [180 kB] 516s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB] 516s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 516s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 516s Get:158 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 516s Get:159 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-openssl arm64 2.2.0+dfsg-1 [404 kB] 516s Get:160 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 516s Get:161 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 516s Get:162 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 516s Get:163 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 517s Get:164 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-genomeinfodb all 1.42.1+dfsg-2 [3883 kB] 517s Get:165 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 517s Get:166 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 517s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 517s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-1-1 [4138 kB] 517s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrixstats arm64 1.4.1-1 [503 kB] 517s Get:170 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-matrixgenerics all 1.18.0-2 [446 kB] 517s Get:171 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 517s Get:172 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 518s Get:173 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-sparsearray arm64 1.6.0+dfsg-2 [1369 kB] 518s Get:174 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 518s Get:175 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 518s Get:176 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 518s Get:177 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-locfit arm64 1.5-9.10-1 [516 kB] 518s Get:178 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB] 518s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 518s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.4-1 [1707 kB] 518s Get:181 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 518s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 518s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 518s Get:184 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-mass arm64 7.3-64-1 [1110 kB] 518s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.166-1 [2312 kB] 518s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 518s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 518s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 518s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 518s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 518s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 518s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 518s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 518s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 518s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 518s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 518s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 518s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 518s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 518s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 518s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 518s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 519s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 519s Get:204 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 519s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpparmadillo arm64 14.2.2-1-1 [843 kB] 519s Get:206 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-deseq2 arm64 1.46.0+dfsg-2 [1237 kB] 519s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bitops arm64 1.0-8-1 [30.1 kB] 519s Get:208 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-rhtslib arm64 3.2.0+dfsg-2 [1429 kB] 519s Get:209 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-rsamtools arm64 2.22.0+dfsg-2 [3668 kB] 520s Get:210 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-genomicalignments arm64 1.42.0-2 [2164 kB] 520s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB] 520s Get:212 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-limma arm64 3.62.2+dfsg-1 [1968 kB] 520s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 520s Get:214 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-multtest arm64 2.62.0-2 [842 kB] 520s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xml arm64 3.99-0.18-1 [1745 kB] 520s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcurl arm64 1.98-1.16+dfsg-1 [806 kB] 520s Get:217 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rjson arm64 0.2.23-1 [104 kB] 520s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 520s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 520s Get:220 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-bioc-rtracklayer arm64 1.66.0-2 [5218 kB] 520s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 520s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ape arm64 5.8-1 [2917 kB] 520s Get:223 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 520s Get:224 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 520s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 520s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 520s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 520s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 520s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 520s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.4+dfsg-1 [244 kB] 520s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 520s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 520s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 521s Get:234 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.8.0-1 [395 kB] 521s Get:235 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.4-1 [352 kB] 521s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 521s Get:237 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB] 521s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 521s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-e1071 arm64 1.7-16-1 [563 kB] 521s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-iterators all 1.0.14-1 [336 kB] 521s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-foreach all 1.5.2-1 [124 kB] 521s Get:242 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-data.table arm64 1.16.4+dfsg-1 [1996 kB] 521s Get:243 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-modelmetrics arm64 1.2.2.2-1build1 [121 kB] 521s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plyr arm64 1.8.9-1 [831 kB] 521s Get:245 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-proc arm64 1.18.5-1 [963 kB] 521s Get:246 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 521s Get:247 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 521s Get:248 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 521s Get:249 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tzdb arm64 0.4.0-2 [512 kB] 521s Get:250 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-clock arm64 0.7.1-1 [1792 kB] 521s Get:251 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gower arm64 1.0.1-1 [206 kB] 521s Get:252 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 521s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rpart arm64 4.1.24-1 [665 kB] 521s Get:254 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nnet arm64 7.3-20-1 [113 kB] 521s Get:255 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shape all 1.4.6.1-1 [749 kB] 521s Get:256 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diagram all 1.6.5-2 [656 kB] 521s Get:257 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-kernsmooth arm64 2.23-26-1 [93.3 kB] 521s Get:258 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-globals all 0.16.3-1 [120 kB] 521s Get:259 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 521s Get:260 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-parallelly arm64 1.38.0-1 [385 kB] 521s Get:261 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 521s Get:262 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] 521s Get:263 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 521s Get:264 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-progressr all 0.14.0-1 [338 kB] 521s Get:265 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-squarem all 2021.1-1 [179 kB] 521s Get:266 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lava all 1.7.3+dfsg-1 [2166 kB] 521s Get:267 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-prodlim arm64 2024.06.25-1 [415 kB] 521s Get:268 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ipred arm64 0.9-15-1 [386 kB] 521s Get:269 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-timechange arm64 0.3.0-1 [172 kB] 521s Get:270 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lubridate arm64 1.9.3+dfsg-1 [1010 kB] 521s Get:271 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 521s Get:272 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-stringi arm64 1.8.4-1build1 [902 kB] 521s Get:273 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 521s Get:274 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 521s Get:275 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-timedate arm64 4041.110-1 [1210 kB] 521s Get:276 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 521s Get:277 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-reshape2 arm64 1.4.4-2build1 [110 kB] 521s Get:278 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-caret arm64 6.0-94+dfsg-1 [3434 kB] 521s Get:279 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-catools arm64 1.18.2-1 [200 kB] 521s Get:280 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cluster arm64 2.1.8-1 [568 kB] 521s Get:281 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.0-1 [111 kB] 521s Get:282 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.49+dfsg-1 [544 kB] 521s Get:283 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 521s Get:284 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 522s Get:285 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 522s Get:286 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 522s Get:287 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.53-1 [145 kB] 522s Get:288 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 522s Get:289 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 522s Get:290 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.0+dfsg-1 [286 kB] 522s Get:291 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 522s Get:292 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 522s Get:293 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 522s Get:294 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB] 522s Get:295 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 522s Get:296 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 522s Get:297 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB] 522s Get:298 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 522s Get:299 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 522s Get:300 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shinyjs all 2.1.0-1 [967 kB] 522s Get:301 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 522s Get:302 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-conquer arm64 1.3.3-1 [440 kB] 522s Get:303 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 522s Get:304 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 522s Get:305 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 522s Get:306 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 522s Get:307 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 522s Get:308 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 523s Get:309 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 523s Get:310 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dotcall64 arm64 1.1-1-1 [38.5 kB] 523s Get:311 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sitmo arm64 2.0.2-1 [129 kB] 523s Get:312 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dqrng arm64 0.3.2+dfsg-1 [157 kB] 523s Get:313 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastdummies all 1.7.4-1 [49.7 kB] 523s Get:314 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fitdistrplus all 1.2-1-1 [2038 kB] 523s Get:315 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fnn arm64 1.1.4.1-1 [125 kB] 523s Get:316 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtools arm64 3.9.5-1 [340 kB] 523s Get:317 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gdata all 3.0.1-1 [491 kB] 523s Get:318 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggrepel arm64 0.9.5-2 [251 kB] 523s Get:319 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggridges all 0.5.6-1 [2195 kB] 523s Get:320 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-goftest arm64 1.2-3-1 [60.2 kB] 523s Get:321 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gplots all 3.2.0-1 [484 kB] 523s Get:322 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 523s Get:323 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 523s Get:324 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-here all 1.0.1-2 [50.3 kB] 523s Get:325 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ica all 1.0-3-1 [85.4 kB] 523s Get:326 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-igraph arm64 2.0.3-1 [5020 kB] 523s Get:327 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-irlba arm64 2.3.5.1-4 [295 kB] 523s Get:328 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-kernlab arm64 0.9-33-1 [1945 kB] 523s Get:329 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpptoml arm64 0.2.2+dfsg-1 [106 kB] 523s Get:330 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB] 523s Get:331 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-reticulate arm64 1.39.0+dfsg-1 [1224 kB] 523s Get:332 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 523s Get:333 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-zoo arm64 1.8-12-2 [984 kB] 523s Get:334 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lmtest arm64 0.9.40-1 [396 kB] 523s Get:335 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 523s Get:336 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 523s Get:337 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB] 523s Get:338 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rdpack all 2.6.2-1 [757 kB] 523s Get:339 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mnormt arm64 2.1.1-2 [170 kB] 523s Get:340 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sparsem arm64 1.84-2-1 [812 kB] 523s Get:341 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-quantreg arm64 5.99.1-1 [1437 kB] 523s Get:342 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sn all 2.1.1-2 [1815 kB] 523s Get:343 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-mvtnorm arm64 1.3-3-1 [921 kB] 524s Get:344 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 524s Get:345 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plotrix all 3.8-4-1 [1120 kB] 524s Get:346 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-th.data all 1.1-2-2 [8794 kB] 524s Get:347 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB] 524s Get:348 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-multcomp all 1.4-26-2 [699 kB] 524s Get:349 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mutoss all 0.1-13-1 [1123 kB] 524s Get:350 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-robustbase arm64 0.99-4-1-1 [3035 kB] 524s Get:351 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-qqconf arm64 1.3.2+dfsg-1 [155 kB] 524s Get:352 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-metap all 1.11-1 [570 kB] 524s Get:353 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 524s Get:354 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-segmented all 2.1-3-1 [1366 kB] 524s Get:355 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mixtools arm64 2.0.0-1 [1400 kB] 524s Get:356 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-patchwork all 1.3.0-1 [3220 kB] 524s Get:357 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 524s Get:358 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 524s Get:359 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB] 524s Get:360 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-polyclip arm64 1.10-7-1 [113 kB] 524s Get:361 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 524s Get:362 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 524s Get:363 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r.oo all 1.26.0-1 [955 kB] 524s Get:364 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r.utils all 2.12.3-1 [1386 kB] 525s Get:365 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rann arm64 2.6.2-1 [46.2 kB] 525s Get:366 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppannoy arm64 0.0.22-1 [231 kB] 525s Get:367 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 525s Get:368 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpphnsw arm64 0.5.0+ds-1 [168 kB] 525s Get:369 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 525s Get:370 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rocr all 1.0-11-3 [456 kB] 525s Get:371 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rspectra arm64 0.16-2-1 [429 kB] 525s Get:372 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rsvd all 1.0.5-1 [3589 kB] 525s Get:373 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rtsne arm64 0.17-1 [105 kB] 525s Get:374 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scattermore arm64 1.2-1 [329 kB] 525s Get:375 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sctransform arm64 0.4.1-1 [496 kB] 525s Get:376 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sp arm64 1:2.1-4+dfsg-1 [1472 kB] 525s Get:377 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spam arm64 2.11-0-1 [2754 kB] 525s Get:378 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-seuratobject arm64 5.0.2-1 [1740 kB] 525s Get:379 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.utils arm64 3.1-0-1 [380 kB] 525s Get:380 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.data all 3.1-2-1 [4039 kB] 525s Get:381 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.geom arm64 3.2-9-2 [3939 kB] 525s Get:382 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.random arm64 3.2-3-1 [1157 kB] 525s Get:383 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tensor all 1.5-4 [15.7 kB] 525s Get:384 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.sparse arm64 3.0-3-1 [214 kB] 525s Get:385 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spatstat.explore arm64 3.2-7-1 [3413 kB] 525s Get:386 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-uwot arm64 0.2.2-1 [915 kB] 526s Get:387 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-seurat arm64 5.1.0-1 [3247 kB] 526s Get:388 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-1 [150 kB] 526s Get:389 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.1.1-1 [1629 kB] 526s Get:390 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vgam arm64 1.1-11-1 [7722 kB] 527s Preconfiguring packages ... 527s Fetched 444 MB in 17s (26.4 MB/s) 527s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 527s Preparing to unpack .../gcc-14-base_14.2.0-13ubuntu1_arm64.deb ... 527s Unpacking gcc-14-base:arm64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 527s Setting up gcc-14-base:arm64 (14.2.0-13ubuntu1) ... 528s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 528s Preparing to unpack .../libstdc++6_14.2.0-13ubuntu1_arm64.deb ... 528s Unpacking libstdc++6:arm64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 528s Setting up libstdc++6:arm64 (14.2.0-13ubuntu1) ... 528s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 528s Preparing to unpack .../libatomic1_14.2.0-13ubuntu1_arm64.deb ... 528s Unpacking libatomic1:arm64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 528s Preparing to unpack .../libgcc-s1_14.2.0-13ubuntu1_arm64.deb ... 528s Unpacking libgcc-s1:arm64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 528s Setting up libgcc-s1:arm64 (14.2.0-13ubuntu1) ... 528s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 528s Preparing to unpack .../000-libpng16-16t64_1.6.45-1_arm64.deb ... 528s Unpacking libpng16-16t64:arm64 (1.6.45-1) over (1.6.44-3) ... 528s Selecting previously unselected package libisl23:arm64. 528s Preparing to unpack .../001-libisl23_0.27-1_arm64.deb ... 528s Unpacking libisl23:arm64 (0.27-1) ... 528s Selecting previously unselected package libmpc3:arm64. 528s Preparing to unpack .../002-libmpc3_1.3.1-1build2_arm64.deb ... 528s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 528s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 528s Preparing to unpack .../003-cpp-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 528s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 528s Selecting previously unselected package cpp-14. 528s Preparing to unpack .../004-cpp-14_14.2.0-13ubuntu1_arm64.deb ... 528s Unpacking cpp-14 (14.2.0-13ubuntu1) ... 529s Selecting previously unselected package cpp-aarch64-linux-gnu. 529s Preparing to unpack .../005-cpp-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 529s Unpacking cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 529s Selecting previously unselected package cpp. 529s Preparing to unpack .../006-cpp_4%3a14.1.0-2ubuntu1_arm64.deb ... 529s Unpacking cpp (4:14.1.0-2ubuntu1) ... 529s Selecting previously unselected package libcc1-0:arm64. 529s Preparing to unpack .../007-libcc1-0_14.2.0-13ubuntu1_arm64.deb ... 529s Unpacking libcc1-0:arm64 (14.2.0-13ubuntu1) ... 529s Selecting previously unselected package libgomp1:arm64. 529s Preparing to unpack .../008-libgomp1_14.2.0-13ubuntu1_arm64.deb ... 529s Unpacking libgomp1:arm64 (14.2.0-13ubuntu1) ... 529s Selecting previously unselected package libitm1:arm64. 529s Preparing to unpack .../009-libitm1_14.2.0-13ubuntu1_arm64.deb ... 529s Unpacking libitm1:arm64 (14.2.0-13ubuntu1) ... 529s Selecting previously unselected package libasan8:arm64. 529s Preparing to unpack .../010-libasan8_14.2.0-13ubuntu1_arm64.deb ... 529s Unpacking libasan8:arm64 (14.2.0-13ubuntu1) ... 529s Selecting previously unselected package liblsan0:arm64. 529s Preparing to unpack .../011-liblsan0_14.2.0-13ubuntu1_arm64.deb ... 529s Unpacking liblsan0:arm64 (14.2.0-13ubuntu1) ... 529s Selecting previously unselected package libtsan2:arm64. 529s Preparing to unpack .../012-libtsan2_14.2.0-13ubuntu1_arm64.deb ... 529s Unpacking libtsan2:arm64 (14.2.0-13ubuntu1) ... 529s Selecting previously unselected package libubsan1:arm64. 529s Preparing to unpack .../013-libubsan1_14.2.0-13ubuntu1_arm64.deb ... 529s Unpacking libubsan1:arm64 (14.2.0-13ubuntu1) ... 529s Selecting previously unselected package libhwasan0:arm64. 529s Preparing to unpack .../014-libhwasan0_14.2.0-13ubuntu1_arm64.deb ... 529s Unpacking libhwasan0:arm64 (14.2.0-13ubuntu1) ... 529s Selecting previously unselected package libgcc-14-dev:arm64. 529s Preparing to unpack .../015-libgcc-14-dev_14.2.0-13ubuntu1_arm64.deb ... 529s Unpacking libgcc-14-dev:arm64 (14.2.0-13ubuntu1) ... 529s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 529s Preparing to unpack .../016-gcc-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 529s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 530s Selecting previously unselected package gcc-14. 530s Preparing to unpack .../017-gcc-14_14.2.0-13ubuntu1_arm64.deb ... 530s Unpacking gcc-14 (14.2.0-13ubuntu1) ... 530s Selecting previously unselected package gcc-aarch64-linux-gnu. 530s Preparing to unpack .../018-gcc-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 530s Unpacking gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 530s Selecting previously unselected package gcc. 530s Preparing to unpack .../019-gcc_4%3a14.1.0-2ubuntu1_arm64.deb ... 530s Unpacking gcc (4:14.1.0-2ubuntu1) ... 530s Selecting previously unselected package libstdc++-14-dev:arm64. 530s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-13ubuntu1_arm64.deb ... 530s Unpacking libstdc++-14-dev:arm64 (14.2.0-13ubuntu1) ... 531s Selecting previously unselected package g++-14-aarch64-linux-gnu. 531s Preparing to unpack .../021-g++-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 531s Unpacking g++-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 531s Selecting previously unselected package g++-14. 531s Preparing to unpack .../022-g++-14_14.2.0-13ubuntu1_arm64.deb ... 531s Unpacking g++-14 (14.2.0-13ubuntu1) ... 531s Selecting previously unselected package g++-aarch64-linux-gnu. 531s Preparing to unpack .../023-g++-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 531s Unpacking g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 531s Selecting previously unselected package g++. 531s Preparing to unpack .../024-g++_4%3a14.1.0-2ubuntu1_arm64.deb ... 531s Unpacking g++ (4:14.1.0-2ubuntu1) ... 531s Selecting previously unselected package build-essential. 531s Preparing to unpack .../025-build-essential_12.10ubuntu1_arm64.deb ... 531s Unpacking build-essential (12.10ubuntu1) ... 531s Selecting previously unselected package dctrl-tools. 531s Preparing to unpack .../026-dctrl-tools_2.24-3build3_arm64.deb ... 531s Unpacking dctrl-tools (2.24-3build3) ... 531s Selecting previously unselected package fonts-dejavu-mono. 531s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 531s Unpacking fonts-dejavu-mono (2.37-8) ... 531s Selecting previously unselected package fonts-dejavu-core. 531s Preparing to unpack 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unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 532s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 532s Selecting previously unselected package fonts-mathjax. 532s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 532s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 532s Selecting previously unselected package libgfortran5:arm64. 532s Preparing to unpack .../035-libgfortran5_14.2.0-13ubuntu1_arm64.deb ... 532s Unpacking libgfortran5:arm64 (14.2.0-13ubuntu1) ... 532s Selecting previously unselected package libgfortran-14-dev:arm64. 532s Preparing to unpack .../036-libgfortran-14-dev_14.2.0-13ubuntu1_arm64.deb ... 532s Unpacking libgfortran-14-dev:arm64 (14.2.0-13ubuntu1) ... 532s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 532s Preparing to unpack .../037-gfortran-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 532s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 533s Selecting previously unselected package gfortran-14. 533s Preparing to unpack .../038-gfortran-14_14.2.0-13ubuntu1_arm64.deb ... 533s Unpacking gfortran-14 (14.2.0-13ubuntu1) ... 533s Selecting previously unselected package gfortran-aarch64-linux-gnu. 533s Preparing to unpack .../039-gfortran-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 533s Unpacking gfortran-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 533s Selecting previously unselected package gfortran. 533s Preparing to unpack .../040-gfortran_4%3a14.1.0-2ubuntu1_arm64.deb ... 533s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 533s Selecting previously unselected package icu-devtools. 533s Preparing to unpack .../041-icu-devtools_76.1-1ubuntu2_arm64.deb ... 533s Unpacking icu-devtools (76.1-1ubuntu2) ... 533s Selecting previously unselected package javascript-common. 533s Preparing to unpack .../042-javascript-common_11+nmu1_all.deb ... 533s Unpacking javascript-common (11+nmu1) ... 533s Selecting previously unselected package libsuitesparseconfig7:arm64. 533s Preparing to unpack .../043-libsuitesparseconfig7_1%3a7.8.3+dfsg-2_arm64.deb ... 533s Unpacking libsuitesparseconfig7:arm64 (1:7.8.3+dfsg-2) ... 533s Selecting previously unselected package libamd3:arm64. 533s Preparing to unpack .../044-libamd3_1%3a7.8.3+dfsg-2_arm64.deb ... 533s Unpacking libamd3:arm64 (1:7.8.3+dfsg-2) ... 533s Selecting previously unselected package libblas3:arm64. 533s Preparing to unpack .../045-libblas3_3.12.0-4_arm64.deb ... 533s Unpacking libblas3:arm64 (3.12.0-4) ... 533s Selecting previously unselected package libblas-dev:arm64. 533s Preparing to unpack .../046-libblas-dev_3.12.0-4_arm64.deb ... 533s Unpacking libblas-dev:arm64 (3.12.0-4) ... 533s Selecting previously unselected package libboost1.83-dev:arm64. 533s Preparing to unpack .../047-libboost1.83-dev_1.83.0-4ubuntu2_arm64.deb ... 533s Unpacking libboost1.83-dev:arm64 (1.83.0-4ubuntu2) ... 536s Selecting previously unselected package libboost-dev:arm64. 536s Preparing to unpack .../048-libboost-dev_1.83.0.2ubuntu1_arm64.deb ... 536s Unpacking libboost-dev:arm64 (1.83.0.2ubuntu1) ... 536s Selecting previously unselected package libbz2-dev:arm64. 536s Preparing to unpack .../049-libbz2-dev_1.0.8-6_arm64.deb ... 536s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 536s Selecting previously unselected package libpixman-1-0:arm64. 536s Preparing to unpack .../050-libpixman-1-0_0.44.0-3_arm64.deb ... 536s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 536s Selecting previously unselected package libxcb-render0:arm64. 536s Preparing to unpack .../051-libxcb-render0_1.17.0-2_arm64.deb ... 536s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 536s Selecting previously unselected package libxcb-shm0:arm64. 536s Preparing to unpack .../052-libxcb-shm0_1.17.0-2_arm64.deb ... 536s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 536s Selecting previously unselected package libxrender1:arm64. 536s Preparing to unpack .../053-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 536s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 536s Selecting previously unselected package libcairo2:arm64. 536s Preparing to unpack .../054-libcairo2_1.18.2-2_arm64.deb ... 536s Unpacking libcairo2:arm64 (1.18.2-2) ... 536s Selecting previously unselected package libcolamd3:arm64. 536s Preparing to unpack .../055-libcolamd3_1%3a7.8.3+dfsg-2_arm64.deb ... 536s Unpacking libcolamd3:arm64 (1:7.8.3+dfsg-2) ... 536s Selecting previously unselected package libdatrie1:arm64. 536s Preparing to unpack .../056-libdatrie1_0.2.13-3build1_arm64.deb ... 536s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 536s Selecting previously unselected package libdeflate0:arm64. 536s Preparing to unpack .../057-libdeflate0_1.23-1_arm64.deb ... 536s Unpacking libdeflate0:arm64 (1.23-1) ... 536s Selecting previously unselected package libdeflate-dev:arm64. 536s Preparing to unpack .../058-libdeflate-dev_1.23-1_arm64.deb ... 536s Unpacking libdeflate-dev:arm64 (1.23-1) ... 536s Selecting previously unselected package libfftw3-double3:arm64. 536s Preparing to unpack .../059-libfftw3-double3_3.3.10-2fakesync1build1_arm64.deb ... 536s Unpacking libfftw3-double3:arm64 (3.3.10-2fakesync1build1) ... 536s Selecting previously unselected package libltdl7:arm64. 536s Preparing to unpack .../060-libltdl7_2.5.4-2_arm64.deb ... 536s Unpacking libltdl7:arm64 (2.5.4-2) ... 536s Selecting previously unselected package libglpk40:arm64. 536s Preparing to unpack .../061-libglpk40_5.0-1build2_arm64.deb ... 536s Unpacking libglpk40:arm64 (5.0-1build2) ... 536s Selecting previously unselected package libgraphite2-3:arm64. 536s Preparing to unpack .../062-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 536s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 536s Selecting previously unselected package libharfbuzz0b:arm64. 536s Preparing to unpack .../063-libharfbuzz0b_10.2.0-1_arm64.deb ... 536s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 537s Selecting previously unselected package x11-common. 537s Preparing to unpack .../064-x11-common_1%3a7.7+23ubuntu3_all.deb ... 537s Unpacking x11-common (1:7.7+23ubuntu3) ... 537s Selecting previously unselected package libice6:arm64. 537s Preparing to unpack .../065-libice6_2%3a1.1.1-1_arm64.deb ... 537s Unpacking libice6:arm64 (2:1.1.1-1) ... 537s Selecting previously unselected package libicu-dev:arm64. 537s Preparing to unpack .../066-libicu-dev_76.1-1ubuntu2_arm64.deb ... 537s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 537s Selecting previously unselected package libjpeg-turbo8:arm64. 537s Preparing to unpack .../067-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 537s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 537s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 537s Preparing to unpack .../068-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 537s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 537s Selecting previously unselected package libjpeg8:arm64. 537s Preparing to unpack .../069-libjpeg8_8c-2ubuntu11_arm64.deb ... 537s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 537s Selecting previously unselected package libjpeg8-dev:arm64. 537s Preparing to unpack .../070-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 537s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 537s Selecting previously unselected package libjpeg-dev:arm64. 537s Preparing to unpack .../071-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 537s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 537s Selecting previously unselected package libjs-bootstrap. 537s Preparing to unpack .../072-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 537s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 538s Selecting previously unselected package libjs-popper.js. 538s Preparing to unpack .../073-libjs-popper.js_1.16.1+ds-6_all.deb ... 538s Unpacking libjs-popper.js (1.16.1+ds-6) ... 538s Selecting previously unselected package libjs-bootstrap4. 538s Preparing to unpack .../074-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 538s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 538s Selecting previously unselected package libjs-d3. 538s Preparing to unpack .../075-libjs-d3_3.5.17-4_all.deb ... 538s Unpacking libjs-d3 (3.5.17-4) ... 538s Selecting previously unselected package libjs-es5-shim. 538s Preparing to unpack .../076-libjs-es5-shim_4.6.7-2_all.deb ... 538s Unpacking libjs-es5-shim (4.6.7-2) ... 538s Selecting previously unselected package libjs-highlight.js. 538s Preparing to unpack .../077-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 538s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 538s Selecting previously unselected package libjs-jquery. 538s Preparing to unpack .../078-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 538s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 538s Selecting previously unselected package libjs-jquery-datatables. 538s Preparing to unpack .../079-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 538s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 538s Selecting previously unselected package libjs-sifter.js. 538s Preparing to unpack .../080-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 538s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 538s Selecting previously unselected package libjs-microplugin.js. 538s Preparing to unpack .../081-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 538s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 538s Selecting previously unselected package libjs-jquery-selectize.js. 538s Preparing to unpack .../082-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 538s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 538s Selecting previously unselected package libjs-jquery-ui. 538s Preparing to unpack .../083-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 538s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 538s Selecting previously unselected package libjs-json. 538s Preparing to unpack .../084-libjs-json_0~20221030+~1.0.8-1_all.deb ... 538s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 539s Selecting previously unselected package libjs-prettify. 539s Preparing to unpack .../085-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 539s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 539s Selecting previously unselected package liblapack3:arm64. 539s Preparing to unpack .../086-liblapack3_3.12.0-4_arm64.deb ... 539s Unpacking liblapack3:arm64 (3.12.0-4) ... 539s Selecting previously unselected package liblapack-dev:arm64. 539s Preparing to unpack .../087-liblapack-dev_3.12.0-4_arm64.deb ... 539s Unpacking liblapack-dev:arm64 (3.12.0-4) ... 539s Selecting previously unselected package liblerc4:arm64. 539s Preparing to unpack .../088-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 539s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 539s Selecting previously unselected package liblua5.4-0:arm64. 539s Preparing to unpack .../089-liblua5.4-0_5.4.7-1_arm64.deb ... 539s Unpacking liblua5.4-0:arm64 (5.4.7-1) ... 539s Selecting previously unselected package libncurses-dev:arm64. 539s Preparing to unpack .../090-libncurses-dev_6.5-2_arm64.deb ... 539s Unpacking libncurses-dev:arm64 (6.5-2) ... 539s Selecting previously unselected package libthai-data. 539s Preparing to unpack .../091-libthai-data_0.1.29-2build1_all.deb ... 539s Unpacking libthai-data (0.1.29-2build1) ... 539s Selecting previously unselected package libthai0:arm64. 539s Preparing to unpack .../092-libthai0_0.1.29-2build1_arm64.deb ... 539s Unpacking libthai0:arm64 (0.1.29-2build1) ... 539s Selecting previously unselected package libpango-1.0-0:arm64. 539s Preparing to unpack .../093-libpango-1.0-0_1.56.0-3_arm64.deb ... 539s Unpacking libpango-1.0-0:arm64 (1.56.0-3) ... 539s Selecting previously unselected package libpangoft2-1.0-0:arm64. 539s Preparing to unpack .../094-libpangoft2-1.0-0_1.56.0-3_arm64.deb ... 539s Unpacking libpangoft2-1.0-0:arm64 (1.56.0-3) ... 539s Selecting previously unselected package libpangocairo-1.0-0:arm64. 540s Preparing to unpack .../095-libpangocairo-1.0-0_1.56.0-3_arm64.deb ... 540s Unpacking libpangocairo-1.0-0:arm64 (1.56.0-3) ... 540s Selecting previously unselected package libpaper2:arm64. 540s Preparing to unpack .../096-libpaper2_2.2.5-0.3_arm64.deb ... 540s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 540s Selecting previously unselected package libpaper-utils. 540s Preparing to unpack .../097-libpaper-utils_2.2.5-0.3_arm64.deb ... 540s Unpacking libpaper-utils (2.2.5-0.3) ... 540s Selecting previously unselected package libpcre2-16-0:arm64. 540s Preparing to unpack .../098-libpcre2-16-0_10.42-4ubuntu3_arm64.deb ... 540s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu3) ... 540s Selecting previously unselected package libpcre2-32-0:arm64. 540s Preparing to unpack .../099-libpcre2-32-0_10.42-4ubuntu3_arm64.deb ... 540s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu3) ... 540s Selecting previously unselected package libpcre2-posix3:arm64. 540s Preparing to unpack .../100-libpcre2-posix3_10.42-4ubuntu3_arm64.deb ... 540s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu3) ... 540s Selecting previously unselected package libpcre2-dev:arm64. 540s Preparing to unpack .../101-libpcre2-dev_10.42-4ubuntu3_arm64.deb ... 540s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu3) ... 540s Selecting previously unselected package libpkgconf3:arm64. 540s Preparing to unpack .../102-libpkgconf3_1.8.1-4_arm64.deb ... 540s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 540s Selecting previously unselected package zlib1g-dev:arm64. 540s Preparing to unpack .../103-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 540s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 540s Selecting previously unselected package libpng-dev:arm64. 540s Preparing to unpack .../104-libpng-dev_1.6.45-1_arm64.deb ... 540s Unpacking libpng-dev:arm64 (1.6.45-1) ... 540s Selecting previously unselected package libreadline-dev:arm64. 540s Preparing to unpack .../105-libreadline-dev_8.2-6_arm64.deb ... 540s Unpacking libreadline-dev:arm64 (8.2-6) ... 540s Selecting previously unselected package libsharpyuv0:arm64. 540s Preparing to unpack .../106-libsharpyuv0_1.5.0-0.1_arm64.deb ... 540s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 540s Selecting previously unselected package libsm6:arm64. 540s Preparing to unpack .../107-libsm6_2%3a1.2.4-1_arm64.deb ... 540s Unpacking libsm6:arm64 (2:1.2.4-1) ... 540s Selecting previously unselected package libtcl8.6:arm64. 540s Preparing to unpack .../108-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 540s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 540s Selecting previously unselected package libjbig0:arm64. 540s Preparing to unpack .../109-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 540s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 541s Selecting previously unselected package libwebp7:arm64. 541s Preparing to unpack .../110-libwebp7_1.5.0-0.1_arm64.deb ... 541s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 541s Selecting previously unselected package libtiff6:arm64. 541s Preparing to unpack .../111-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 541s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 541s Selecting previously unselected package libxft2:arm64. 541s Preparing to unpack .../112-libxft2_2.3.6-1build1_arm64.deb ... 541s Unpacking libxft2:arm64 (2.3.6-1build1) ... 541s Selecting previously unselected package libxss1:arm64. 541s Preparing to unpack .../113-libxss1_1%3a1.2.3-1build3_arm64.deb ... 541s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 541s Selecting previously unselected package libtk8.6:arm64. 541s Preparing to unpack .../114-libtk8.6_8.6.16-1_arm64.deb ... 541s Unpacking libtk8.6:arm64 (8.6.16-1) ... 541s Selecting previously unselected package libxt6t64:arm64. 541s Preparing to unpack .../115-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 541s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 541s Selecting previously unselected package zip. 541s Preparing to unpack .../116-zip_3.0-14ubuntu1_arm64.deb ... 541s Unpacking zip (3.0-14ubuntu1) ... 541s Selecting previously unselected package unzip. 541s Preparing to unpack .../117-unzip_6.0-28ubuntu6_arm64.deb ... 541s Unpacking unzip (6.0-28ubuntu6) ... 541s Selecting previously unselected package xdg-utils. 541s Preparing to unpack .../118-xdg-utils_1.2.1-0ubuntu1_all.deb ... 541s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 541s Selecting previously unselected package r-base-core. 541s Preparing to unpack .../119-r-base-core_4.4.2-1build1_arm64.deb ... 541s Unpacking r-base-core (4.4.2-1build1) ... 542s Selecting previously unselected package r-cran-littler. 542s Preparing to unpack .../120-r-cran-littler_0.3.20-2_arm64.deb ... 542s Unpacking r-cran-littler (0.3.20-2) ... 542s Selecting previously unselected package littler. 542s Preparing to unpack .../121-littler_0.3.20-2_all.deb ... 542s Unpacking littler (0.3.20-2) ... 542s Selecting previously unselected package node-bootstrap-sass. 542s Preparing to unpack .../122-node-bootstrap-sass_3.4.3-2_all.deb ... 542s Unpacking node-bootstrap-sass (3.4.3-2) ... 542s Selecting previously unselected package node-html5shiv. 542s Preparing to unpack .../123-node-html5shiv_3.7.3+dfsg-5_all.deb ... 542s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 542s Selecting previously unselected package node-normalize.css. 542s Preparing to unpack .../124-node-normalize.css_8.0.1-5_all.deb ... 542s Unpacking node-normalize.css (8.0.1-5) ... 542s Selecting previously unselected package pandoc-data. 542s Preparing to unpack .../125-pandoc-data_3.1.11.1-3build1_all.deb ... 542s Unpacking pandoc-data (3.1.11.1-3build1) ... 542s Selecting previously unselected package pandoc. 542s Preparing to unpack .../126-pandoc_3.1.11.1+ds-2_arm64.deb ... 542s Unpacking pandoc (3.1.11.1+ds-2) ... 544s Selecting previously unselected package liblzma-dev:arm64. 544s Preparing to unpack .../127-liblzma-dev_5.6.3-1_arm64.deb ... 544s Unpacking liblzma-dev:arm64 (5.6.3-1) ... 544s Selecting previously unselected package pkgconf-bin. 544s Preparing to unpack .../128-pkgconf-bin_1.8.1-4_arm64.deb ... 544s Unpacking pkgconf-bin (1.8.1-4) ... 544s Selecting previously unselected package pkgconf:arm64. 544s Preparing to unpack .../129-pkgconf_1.8.1-4_arm64.deb ... 544s Unpacking pkgconf:arm64 (1.8.1-4) ... 544s Selecting previously unselected package libtirpc-dev:arm64. 544s Preparing to unpack .../130-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 544s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 544s Selecting previously unselected package r-base-dev. 544s Preparing to unpack .../131-r-base-dev_4.4.2-1build1_all.deb ... 544s Unpacking r-base-dev (4.4.2-1build1) ... 544s Selecting previously unselected package pkg-r-autopkgtest. 544s Preparing to unpack .../132-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 544s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 544s Selecting previously unselected package r-bioc-biocgenerics. 544s Preparing to unpack .../133-r-bioc-biocgenerics_0.52.0-2_all.deb ... 544s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 544s Selecting previously unselected package r-bioc-biobase. 544s Preparing to unpack .../134-r-bioc-biobase_2.66.0-2_arm64.deb ... 544s Unpacking r-bioc-biobase (2.66.0-2) ... 544s Selecting previously unselected package r-bioc-s4vectors. 544s Preparing to unpack .../135-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 544s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 544s Selecting previously unselected package r-bioc-biocio. 544s Preparing to unpack .../136-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 544s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 544s Selecting previously unselected package r-cran-formatr. 544s Preparing to unpack .../137-r-cran-formatr_1.14-2_all.deb ... 544s Unpacking r-cran-formatr (1.14-2) ... 544s Selecting previously unselected package r-cran-lambda.r. 544s Preparing to unpack .../138-r-cran-lambda.r_1.2.4-2build1_all.deb ... 544s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 544s Selecting previously unselected package r-cran-futile.options. 545s Preparing to unpack .../139-r-cran-futile.options_1.0.1-3build1_all.deb ... 545s Unpacking r-cran-futile.options (1.0.1-3build1) ... 545s Selecting previously unselected package r-cran-futile.logger. 545s Preparing to unpack .../140-r-cran-futile.logger_1.4.3-4build1_all.deb ... 545s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 545s Selecting previously unselected package r-cran-snow. 545s Preparing to unpack .../141-r-cran-snow_1%3a0.4.4-2_all.deb ... 545s Unpacking r-cran-snow (1:0.4.4-2) ... 545s Selecting previously unselected package r-cran-codetools. 545s Preparing to unpack .../142-r-cran-codetools_0.2-20-1_all.deb ... 545s Unpacking r-cran-codetools (0.2-20-1) ... 545s Selecting previously unselected package r-cran-bh. 545s Preparing to unpack .../143-r-cran-bh_1.84.0-1_all.deb ... 545s Unpacking r-cran-bh (1.84.0-1) ... 545s Selecting previously unselected package r-cran-cpp11. 545s Preparing to unpack .../144-r-cran-cpp11_0.5.0-1_all.deb ... 545s Unpacking r-cran-cpp11 (0.5.0-1) ... 545s Selecting previously unselected package r-bioc-biocparallel. 545s Preparing to unpack .../145-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 545s Unpacking r-bioc-biocparallel (1.40.0-2) ... 545s Selecting previously unselected package r-bioc-iranges. 545s Preparing to unpack .../146-r-bioc-iranges_2.40.1-2_arm64.deb ... 545s Unpacking r-bioc-iranges (2.40.1-2) ... 545s Selecting previously unselected package r-bioc-zlibbioc. 545s Preparing to unpack .../147-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 545s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 545s Selecting previously unselected package r-bioc-xvector. 545s Preparing to unpack .../148-r-bioc-xvector_0.46.0-2_arm64.deb ... 545s Unpacking r-bioc-xvector (0.46.0-2) ... 545s Selecting previously unselected package r-cran-curl. 545s Preparing to unpack .../149-r-cran-curl_5.2.3+dfsg-1ubuntu1_arm64.deb ... 545s Unpacking r-cran-curl (5.2.3+dfsg-1ubuntu1) ... 545s Selecting previously unselected package r-cran-jsonlite. 545s Preparing to unpack .../150-r-cran-jsonlite_1.8.9+dfsg-1_arm64.deb ... 545s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 545s Selecting previously unselected package r-cran-mime. 545s Preparing to unpack .../151-r-cran-mime_0.12-2_arm64.deb ... 545s Unpacking r-cran-mime (0.12-2) ... 545s Selecting previously unselected package r-cran-sys. 545s Preparing to unpack .../152-r-cran-sys_3.4.3-1_arm64.deb ... 545s Unpacking r-cran-sys (3.4.3-1) ... 546s Selecting previously unselected package r-cran-askpass. 546s Preparing to unpack .../153-r-cran-askpass_1.2.1-1_arm64.deb ... 546s Unpacking r-cran-askpass (1.2.1-1) ... 546s Selecting previously unselected package r-cran-openssl. 546s Preparing to unpack .../154-r-cran-openssl_2.2.0+dfsg-1_arm64.deb ... 546s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 546s Selecting previously unselected package r-cran-r6. 546s Preparing to unpack .../155-r-cran-r6_2.5.1-1_all.deb ... 546s Unpacking r-cran-r6 (2.5.1-1) ... 546s Selecting previously unselected package r-cran-httr. 546s Preparing to unpack .../156-r-cran-httr_1.4.7+dfsg-1_all.deb ... 546s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 546s Selecting previously unselected package r-bioc-ucsc.utils. 546s Preparing to unpack .../157-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 546s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 546s Selecting previously unselected package r-bioc-genomeinfodbdata. 546s Preparing to unpack .../158-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 546s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 546s Selecting previously unselected package r-bioc-genomeinfodb. 546s Preparing to unpack .../159-r-bioc-genomeinfodb_1.42.1+dfsg-2_all.deb ... 546s Unpacking r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 546s Selecting previously unselected package r-cran-crayon. 546s Preparing to unpack .../160-r-cran-crayon_1.5.2-1_all.deb ... 546s Unpacking r-cran-crayon (1.5.2-1) ... 546s Selecting previously unselected package r-bioc-biostrings. 546s Preparing to unpack .../161-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 546s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 546s Selecting previously unselected package r-cran-lattice. 546s Preparing to unpack .../162-r-cran-lattice_0.22-6-1_arm64.deb ... 546s Unpacking r-cran-lattice (0.22-6-1) ... 546s Selecting previously unselected package r-cran-matrix. 546s Preparing to unpack .../163-r-cran-matrix_1.7-1-1_arm64.deb ... 546s Unpacking r-cran-matrix (1.7-1-1) ... 547s Selecting previously unselected package r-cran-matrixstats. 547s Preparing to unpack .../164-r-cran-matrixstats_1.4.1-1_arm64.deb ... 547s Unpacking r-cran-matrixstats (1.4.1-1) ... 547s Selecting previously unselected package r-bioc-matrixgenerics. 547s Preparing to unpack .../165-r-bioc-matrixgenerics_1.18.0-2_all.deb ... 547s Unpacking r-bioc-matrixgenerics (1.18.0-2) ... 547s Selecting previously unselected package r-cran-abind. 547s Preparing to unpack .../166-r-cran-abind_1.4-8-1_all.deb ... 547s Unpacking r-cran-abind (1.4-8-1) ... 547s Selecting previously unselected package r-bioc-s4arrays. 547s Preparing to unpack .../167-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 547s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 547s Selecting previously unselected package r-bioc-sparsearray. 547s Preparing to unpack .../168-r-bioc-sparsearray_1.6.0+dfsg-2_arm64.deb ... 547s Unpacking r-bioc-sparsearray (1.6.0+dfsg-2) ... 547s Selecting previously unselected package r-bioc-delayedarray. 547s Preparing to unpack .../169-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 547s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 547s Selecting previously unselected package r-bioc-genomicranges. 547s Preparing to unpack .../170-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 547s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 547s Selecting previously unselected package r-bioc-summarizedexperiment. 547s Preparing to unpack .../171-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 547s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 547s Selecting previously unselected package r-cran-locfit. 547s Preparing to unpack .../172-r-cran-locfit_1.5-9.10-1_arm64.deb ... 547s Unpacking r-cran-locfit (1.5-9.10-1) ... 547s Selecting previously unselected package r-cran-cli. 547s Preparing to unpack .../173-r-cran-cli_3.6.3-1_arm64.deb ... 547s Unpacking r-cran-cli (3.6.3-1) ... 547s Selecting previously unselected package r-cran-glue. 547s Preparing to unpack .../174-r-cran-glue_1.8.0-1_arm64.deb ... 547s Unpacking r-cran-glue (1.8.0-1) ... 547s Selecting previously unselected package r-cran-rlang. 547s Preparing to unpack .../175-r-cran-rlang_1.1.4-1_arm64.deb ... 547s Unpacking r-cran-rlang (1.1.4-1) ... 548s Selecting previously unselected package r-cran-lifecycle. 548s Preparing to unpack .../176-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 548s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 548s Selecting previously unselected package r-cran-gtable. 548s Preparing to unpack .../177-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 548s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 548s Selecting previously unselected package r-cran-isoband. 548s Preparing to unpack .../178-r-cran-isoband_0.2.7-1_arm64.deb ... 548s Unpacking r-cran-isoband (0.2.7-1) ... 548s Selecting previously unselected package r-cran-mass. 548s Preparing to unpack .../179-r-cran-mass_7.3-64-1_arm64.deb ... 548s Unpacking r-cran-mass (7.3-64-1) ... 548s Selecting previously unselected package r-cran-nlme. 548s Preparing to unpack .../180-r-cran-nlme_3.1.166-1_arm64.deb ... 548s Unpacking r-cran-nlme (3.1.166-1) ... 548s Selecting previously unselected package r-cran-mgcv. 548s Preparing to unpack .../181-r-cran-mgcv_1.9-1-1_arm64.deb ... 548s Unpacking r-cran-mgcv (1.9-1-1) ... 548s Selecting previously unselected package r-cran-farver. 548s Preparing to unpack .../182-r-cran-farver_2.1.2-1_arm64.deb ... 548s Unpacking r-cran-farver (2.1.2-1) ... 548s Selecting previously unselected package r-cran-labeling. 548s Preparing to unpack .../183-r-cran-labeling_0.4.3-1_all.deb ... 548s Unpacking r-cran-labeling (0.4.3-1) ... 548s Selecting previously unselected package r-cran-colorspace. 548s Preparing to unpack .../184-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 548s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 548s Selecting previously unselected package r-cran-munsell. 548s Preparing to unpack .../185-r-cran-munsell_0.5.1-1_all.deb ... 548s Unpacking r-cran-munsell (0.5.1-1) ... 548s Selecting previously unselected package r-cran-rcolorbrewer. 548s Preparing to unpack .../186-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 548s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 548s Selecting previously unselected package r-cran-viridislite. 548s Preparing to unpack .../187-r-cran-viridislite_0.4.2-2_all.deb ... 548s Unpacking r-cran-viridislite (0.4.2-2) ... 549s Selecting previously unselected package r-cran-scales. 549s Preparing to unpack .../188-r-cran-scales_1.3.0-1_all.deb ... 549s Unpacking r-cran-scales (1.3.0-1) ... 549s Selecting previously unselected package r-cran-fansi. 549s Preparing to unpack .../189-r-cran-fansi_1.0.5-1_arm64.deb ... 549s Unpacking r-cran-fansi (1.0.5-1) ... 549s Selecting previously unselected package r-cran-magrittr. 549s Preparing to unpack .../190-r-cran-magrittr_2.0.3-1_arm64.deb ... 549s Unpacking r-cran-magrittr (2.0.3-1) ... 549s Selecting previously unselected package r-cran-utf8. 549s Preparing to unpack .../191-r-cran-utf8_1.2.4-1_arm64.deb ... 549s Unpacking r-cran-utf8 (1.2.4-1) ... 549s Selecting previously unselected package r-cran-vctrs. 549s Preparing to unpack .../192-r-cran-vctrs_0.6.5-1_arm64.deb ... 549s Unpacking r-cran-vctrs (0.6.5-1) ... 549s Selecting previously unselected package r-cran-pillar. 549s Preparing to unpack .../193-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 549s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 549s Selecting previously unselected package r-cran-pkgconfig. 549s Preparing to unpack .../194-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 549s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 549s Selecting previously unselected package r-cran-tibble. 549s Preparing to unpack .../195-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 549s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 549s Selecting previously unselected package r-cran-withr. 549s Preparing to unpack .../196-r-cran-withr_3.0.2+dfsg-1_all.deb ... 549s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 549s Selecting previously unselected package r-cran-ggplot2. 549s Preparing to unpack .../197-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 549s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 549s Selecting previously unselected package r-cran-pkgkitten. 549s Preparing to unpack .../198-r-cran-pkgkitten_0.2.4-1_all.deb ... 549s Unpacking r-cran-pkgkitten (0.2.4-1) ... 549s Selecting previously unselected package r-cran-rcpp. 549s Preparing to unpack .../199-r-cran-rcpp_1.0.14-1_arm64.deb ... 549s Unpacking r-cran-rcpp (1.0.14-1) ... 550s Selecting previously unselected package r-cran-rcpparmadillo. 550s Preparing to unpack .../200-r-cran-rcpparmadillo_14.2.2-1-1_arm64.deb ... 550s Unpacking r-cran-rcpparmadillo (14.2.2-1-1) ... 550s Selecting previously unselected package r-bioc-deseq2. 550s Preparing to unpack .../201-r-bioc-deseq2_1.46.0+dfsg-2_arm64.deb ... 550s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 550s Selecting previously unselected package r-cran-bitops. 550s Preparing to unpack .../202-r-cran-bitops_1.0-8-1_arm64.deb ... 550s Unpacking r-cran-bitops (1.0-8-1) ... 550s Selecting previously unselected package r-bioc-rhtslib. 550s Preparing to unpack .../203-r-bioc-rhtslib_3.2.0+dfsg-2_arm64.deb ... 550s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 550s Selecting previously unselected package r-bioc-rsamtools. 550s Preparing to unpack .../204-r-bioc-rsamtools_2.22.0+dfsg-2_arm64.deb ... 550s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 550s Selecting previously unselected package r-bioc-genomicalignments. 550s Preparing to unpack .../205-r-bioc-genomicalignments_1.42.0-2_arm64.deb ... 550s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 550s Selecting previously unselected package r-cran-statmod. 550s Preparing to unpack .../206-r-cran-statmod_1.5.0-1_arm64.deb ... 550s Unpacking r-cran-statmod (1.5.0-1) ... 550s Selecting previously unselected package r-bioc-limma. 550s Preparing to unpack .../207-r-bioc-limma_3.62.2+dfsg-1_arm64.deb ... 550s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 550s Selecting previously unselected package r-cran-survival. 551s Preparing to unpack .../208-r-cran-survival_3.8-3-1_arm64.deb ... 551s Unpacking r-cran-survival (3.8-3-1) ... 551s Selecting previously unselected package r-bioc-multtest. 551s Preparing to unpack .../209-r-bioc-multtest_2.62.0-2_arm64.deb ... 551s Unpacking r-bioc-multtest (2.62.0-2) ... 551s Selecting previously unselected package r-cran-xml. 551s Preparing to unpack .../210-r-cran-xml_3.99-0.18-1_arm64.deb ... 551s Unpacking r-cran-xml (3.99-0.18-1) ... 551s Selecting previously unselected package r-cran-rcurl. 551s Preparing to unpack .../211-r-cran-rcurl_1.98-1.16+dfsg-1_arm64.deb ... 551s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 551s Selecting previously unselected package r-cran-rjson. 551s Preparing to unpack .../212-r-cran-rjson_0.2.23-1_arm64.deb ... 551s Unpacking r-cran-rjson (0.2.23-1) ... 551s Selecting previously unselected package r-cran-yaml. 551s Preparing to unpack .../213-r-cran-yaml_2.3.10-1_arm64.deb ... 551s Unpacking r-cran-yaml (2.3.10-1) ... 551s Selecting previously unselected package r-cran-restfulr. 551s Preparing to unpack .../214-r-cran-restfulr_0.0.15-1_arm64.deb ... 551s Unpacking r-cran-restfulr (0.0.15-1) ... 551s Selecting previously unselected package r-bioc-rtracklayer. 551s Preparing to unpack .../215-r-bioc-rtracklayer_1.66.0-2_arm64.deb ... 551s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 551s Selecting previously unselected package r-cran-digest. 551s Preparing to unpack .../216-r-cran-digest_0.6.37-1_arm64.deb ... 551s Unpacking r-cran-digest (0.6.37-1) ... 551s Selecting previously unselected package r-cran-ape. 551s Preparing to unpack .../217-r-cran-ape_5.8-1_arm64.deb ... 551s Unpacking r-cran-ape (5.8-1) ... 551s Selecting previously unselected package r-cran-base64enc. 551s Preparing to unpack .../218-r-cran-base64enc_0.1-3-3_arm64.deb ... 551s Unpacking r-cran-base64enc (0.1-3-3) ... 552s Selecting previously unselected package r-cran-brio. 552s Preparing to unpack .../219-r-cran-brio_1.1.5-1_arm64.deb ... 552s Unpacking r-cran-brio (1.1.5-1) ... 552s Selecting previously unselected package r-cran-fastmap. 552s Preparing to unpack .../220-r-cran-fastmap_1.2.0-1_arm64.deb ... 552s Unpacking r-cran-fastmap (1.2.0-1) ... 552s Selecting previously unselected package r-cran-cachem. 552s Preparing to unpack .../221-r-cran-cachem_1.1.0-1_arm64.deb ... 552s Unpacking r-cran-cachem (1.1.0-1) ... 552s Selecting previously unselected package r-cran-htmltools. 552s Preparing to unpack .../222-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 552s Unpacking r-cran-htmltools (0.5.8.1-1) ... 552s Selecting previously unselected package r-cran-jquerylib. 552s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 552s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 552s Selecting previously unselected package r-cran-memoise. 552s Preparing to unpack .../224-r-cran-memoise_2.0.1-1_all.deb ... 552s Unpacking r-cran-memoise (2.0.1-1) ... 552s Selecting previously unselected package r-cran-fs. 552s Preparing to unpack .../225-r-cran-fs_1.6.4+dfsg-1_arm64.deb ... 552s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 552s Selecting previously unselected package r-cran-rappdirs. 552s Preparing to unpack .../226-r-cran-rappdirs_0.3.3-1_arm64.deb ... 552s Unpacking r-cran-rappdirs (0.3.3-1) ... 552s Selecting previously unselected package r-cran-sass. 552s Preparing to unpack .../227-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 552s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 552s Selecting previously unselected package r-cran-bslib. 552s Preparing to unpack .../228-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 552s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 552s Selecting previously unselected package r-cran-ps. 552s Preparing to unpack .../229-r-cran-ps_1.8.0-1_arm64.deb ... 552s Unpacking r-cran-ps (1.8.0-1) ... 552s Selecting previously unselected package r-cran-processx. 553s Preparing to unpack .../230-r-cran-processx_3.8.4-1_arm64.deb ... 553s Unpacking r-cran-processx (3.8.4-1) ... 553s Selecting previously unselected package r-cran-callr. 553s Preparing to unpack .../231-r-cran-callr_3.7.6-1_all.deb ... 553s Unpacking r-cran-callr (3.7.6-1) ... 553s Selecting previously unselected package r-cran-class. 553s Preparing to unpack .../232-r-cran-class_7.3-23-1_arm64.deb ... 553s Unpacking r-cran-class (7.3-23-1) ... 553s Selecting previously unselected package r-cran-proxy. 553s Preparing to unpack .../233-r-cran-proxy_0.4-27-1_arm64.deb ... 553s Unpacking r-cran-proxy (0.4-27-1) ... 553s Selecting previously unselected package r-cran-e1071. 553s Preparing to unpack .../234-r-cran-e1071_1.7-16-1_arm64.deb ... 553s Unpacking r-cran-e1071 (1.7-16-1) ... 553s Selecting previously unselected package r-cran-iterators. 553s Preparing to unpack .../235-r-cran-iterators_1.0.14-1_all.deb ... 553s Unpacking r-cran-iterators (1.0.14-1) ... 553s Selecting previously unselected package r-cran-foreach. 553s Preparing to unpack .../236-r-cran-foreach_1.5.2-1_all.deb ... 553s Unpacking r-cran-foreach (1.5.2-1) ... 553s Selecting previously unselected package r-cran-data.table. 553s Preparing to unpack .../237-r-cran-data.table_1.16.4+dfsg-1_arm64.deb ... 553s Unpacking r-cran-data.table (1.16.4+dfsg-1) ... 553s Selecting previously unselected package r-cran-modelmetrics. 553s Preparing to unpack .../238-r-cran-modelmetrics_1.2.2.2-1build1_arm64.deb ... 553s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 553s Selecting previously unselected package r-cran-plyr. 553s Preparing to unpack .../239-r-cran-plyr_1.8.9-1_arm64.deb ... 553s Unpacking r-cran-plyr (1.8.9-1) ... 553s Selecting previously unselected package r-cran-proc. 553s Preparing to unpack .../240-r-cran-proc_1.18.5-1_arm64.deb ... 553s Unpacking r-cran-proc (1.18.5-1) ... 553s Selecting previously unselected package r-cran-generics. 553s Preparing to unpack .../241-r-cran-generics_0.1.3-1_all.deb ... 553s Unpacking r-cran-generics (0.1.3-1) ... 553s Selecting previously unselected package r-cran-tidyselect. 554s Preparing to unpack .../242-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 554s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 554s Selecting previously unselected package r-cran-dplyr. 554s Preparing to unpack .../243-r-cran-dplyr_1.1.4-4_arm64.deb ... 554s Unpacking r-cran-dplyr (1.1.4-4) ... 554s Selecting previously unselected package r-cran-tzdb. 554s Preparing to unpack .../244-r-cran-tzdb_0.4.0-2_arm64.deb ... 554s Unpacking r-cran-tzdb (0.4.0-2) ... 554s Selecting previously unselected package r-cran-clock. 554s Preparing to unpack .../245-r-cran-clock_0.7.1-1_arm64.deb ... 554s Unpacking r-cran-clock (0.7.1-1) ... 554s Selecting previously unselected package r-cran-gower. 554s Preparing to unpack .../246-r-cran-gower_1.0.1-1_arm64.deb ... 554s Unpacking r-cran-gower (1.0.1-1) ... 554s Selecting previously unselected package r-cran-hardhat. 554s Preparing to unpack .../247-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 554s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 554s Selecting previously unselected package r-cran-rpart. 554s Preparing to unpack .../248-r-cran-rpart_4.1.24-1_arm64.deb ... 554s Unpacking r-cran-rpart (4.1.24-1) ... 554s Selecting previously unselected package r-cran-nnet. 554s Preparing to unpack .../249-r-cran-nnet_7.3-20-1_arm64.deb ... 554s Unpacking r-cran-nnet (7.3-20-1) ... 554s Selecting previously unselected package r-cran-shape. 554s Preparing to unpack .../250-r-cran-shape_1.4.6.1-1_all.deb ... 554s Unpacking r-cran-shape (1.4.6.1-1) ... 555s Selecting previously unselected package r-cran-diagram. 555s Preparing to unpack .../251-r-cran-diagram_1.6.5-2_all.deb ... 555s Unpacking r-cran-diagram (1.6.5-2) ... 555s Selecting previously unselected package r-cran-kernsmooth. 555s Preparing to unpack .../252-r-cran-kernsmooth_2.23-26-1_arm64.deb ... 555s Unpacking r-cran-kernsmooth (2.23-26-1) ... 555s Selecting previously unselected package r-cran-globals. 555s Preparing to unpack .../253-r-cran-globals_0.16.3-1_all.deb ... 555s Unpacking r-cran-globals (0.16.3-1) ... 555s Selecting previously unselected package r-cran-listenv. 555s Preparing to unpack .../254-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 555s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 555s Selecting previously unselected package r-cran-parallelly. 555s Preparing to unpack .../255-r-cran-parallelly_1.38.0-1_arm64.deb ... 555s Unpacking r-cran-parallelly (1.38.0-1) ... 555s Selecting previously unselected package r-cran-future. 555s Preparing to unpack .../256-r-cran-future_1.34.0+dfsg-1_all.deb ... 555s Unpacking r-cran-future (1.34.0+dfsg-1) ... 555s Selecting previously unselected package r-cran-future.apply. 555s Preparing to unpack .../257-r-cran-future.apply_1.11.2+dfsg-1_all.deb ... 555s Unpacking r-cran-future.apply (1.11.2+dfsg-1) ... 555s Selecting previously unselected package r-cran-numderiv. 555s Preparing to unpack .../258-r-cran-numderiv_2016.8-1.1-3_all.deb ... 555s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 555s Selecting previously unselected package r-cran-progressr. 555s Preparing to unpack .../259-r-cran-progressr_0.14.0-1_all.deb ... 555s Unpacking r-cran-progressr (0.14.0-1) ... 555s Selecting previously unselected package r-cran-squarem. 555s Preparing to unpack .../260-r-cran-squarem_2021.1-1_all.deb ... 555s Unpacking r-cran-squarem (2021.1-1) ... 555s Selecting previously unselected package r-cran-lava. 556s Preparing to unpack .../261-r-cran-lava_1.7.3+dfsg-1_all.deb ... 556s Unpacking r-cran-lava (1.7.3+dfsg-1) ... 556s Selecting previously unselected package r-cran-prodlim. 556s Preparing to unpack .../262-r-cran-prodlim_2024.06.25-1_arm64.deb ... 556s Unpacking r-cran-prodlim (2024.06.25-1) ... 556s Selecting previously unselected package r-cran-ipred. 556s Preparing to unpack .../263-r-cran-ipred_0.9-15-1_arm64.deb ... 556s Unpacking r-cran-ipred (0.9-15-1) ... 556s Selecting previously unselected package r-cran-timechange. 556s Preparing to unpack .../264-r-cran-timechange_0.3.0-1_arm64.deb ... 556s Unpacking r-cran-timechange (0.3.0-1) ... 556s Selecting previously unselected package r-cran-lubridate. 556s Preparing to unpack .../265-r-cran-lubridate_1.9.3+dfsg-1_arm64.deb ... 556s Unpacking r-cran-lubridate (1.9.3+dfsg-1) ... 556s Selecting previously unselected package r-cran-purrr. 556s Preparing to unpack .../266-r-cran-purrr_1.0.2-1_arm64.deb ... 556s Unpacking r-cran-purrr (1.0.2-1) ... 556s Selecting previously unselected package r-cran-stringi. 556s Preparing to unpack .../267-r-cran-stringi_1.8.4-1build1_arm64.deb ... 556s Unpacking r-cran-stringi (1.8.4-1build1) ... 556s Selecting previously unselected package r-cran-stringr. 556s Preparing to unpack .../268-r-cran-stringr_1.5.1-1_all.deb ... 556s Unpacking r-cran-stringr (1.5.1-1) ... 556s Selecting previously unselected package r-cran-tidyr. 556s Preparing to unpack .../269-r-cran-tidyr_1.3.1-1_arm64.deb ... 556s Unpacking r-cran-tidyr (1.3.1-1) ... 556s Selecting previously unselected package r-cran-timedate. 556s Preparing to unpack .../270-r-cran-timedate_4041.110-1_arm64.deb ... 556s Unpacking r-cran-timedate (4041.110-1) ... 556s Selecting previously unselected package r-cran-recipes. 556s Preparing to unpack .../271-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 556s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 556s Selecting previously unselected package r-cran-reshape2. 557s Preparing to unpack .../272-r-cran-reshape2_1.4.4-2build1_arm64.deb ... 557s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 557s Selecting previously unselected package r-cran-caret. 557s Preparing to unpack .../273-r-cran-caret_6.0-94+dfsg-1_arm64.deb ... 557s Unpacking r-cran-caret (6.0-94+dfsg-1) ... 557s Selecting previously unselected package r-cran-catools. 557s Preparing to unpack .../274-r-cran-catools_1.18.2-1_arm64.deb ... 557s Unpacking r-cran-catools (1.18.2-1) ... 557s Selecting previously unselected package r-cran-cluster. 557s Preparing to unpack .../275-r-cran-cluster_2.1.8-1_arm64.deb ... 557s Unpacking r-cran-cluster (2.1.8-1) ... 557s Selecting previously unselected package r-cran-evaluate. 557s Preparing to unpack .../276-r-cran-evaluate_1.0.0-1_all.deb ... 557s Unpacking r-cran-evaluate (1.0.0-1) ... 557s Selecting previously unselected package r-cran-xfun. 557s Preparing to unpack .../277-r-cran-xfun_0.49+dfsg-1_arm64.deb ... 557s Unpacking r-cran-xfun (0.49+dfsg-1) ... 557s Selecting previously unselected package r-cran-highr. 557s Preparing to unpack .../278-r-cran-highr_0.11+dfsg-1_all.deb ... 557s Unpacking r-cran-highr (0.11+dfsg-1) ... 557s Selecting previously unselected package libjs-mathjax. 557s Preparing to unpack .../279-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 557s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 558s Selecting previously unselected package r-cran-knitr. 558s Preparing to unpack .../280-r-cran-knitr_1.49+dfsg-1_all.deb ... 558s Unpacking r-cran-knitr (1.49+dfsg-1) ... 558s Selecting previously unselected package r-cran-fontawesome. 558s Preparing to unpack .../281-r-cran-fontawesome_0.5.2-1_all.deb ... 558s Unpacking r-cran-fontawesome (0.5.2-1) ... 558s Selecting previously unselected package r-cran-tinytex. 558s Preparing to unpack .../282-r-cran-tinytex_0.53-1_all.deb ... 558s Unpacking r-cran-tinytex (0.53-1) ... 558s Selecting previously unselected package libjs-modernizr. 558s Preparing to unpack .../283-libjs-modernizr_3.13.0-0.1_all.deb ... 558s Unpacking libjs-modernizr (3.13.0-0.1) ... 558s Selecting previously unselected package r-cran-later. 558s Preparing to unpack .../284-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 558s Unpacking r-cran-later (1.3.2+dfsg-1) ... 558s Selecting previously unselected package r-cran-promises. 558s Preparing to unpack .../285-r-cran-promises_1.3.0+dfsg-1_arm64.deb ... 558s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 558s Selecting previously unselected package r-cran-httpuv. 558s Preparing to unpack .../286-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 558s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 558s Selecting previously unselected package r-cran-xtable. 559s Preparing to unpack .../287-r-cran-xtable_1%3a1.8-4-2_all.deb ... 559s Unpacking r-cran-xtable (1:1.8-4-2) ... 559s Selecting previously unselected package r-cran-sourcetools. 559s Preparing to unpack .../288-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 559s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 559s Selecting previously unselected package r-cran-commonmark. 559s Preparing to unpack .../289-r-cran-commonmark_1.9.2-2_arm64.deb ... 559s Unpacking r-cran-commonmark (1.9.2-2) ... 559s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 559s Preparing to unpack .../290-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 559s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 559s Selecting previously unselected package r-cran-shiny. 559s Preparing to unpack .../291-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 559s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 559s Selecting previously unselected package r-cran-rmarkdown. 559s Preparing to unpack .../292-r-cran-rmarkdown_2.28+dfsg-1_all.deb ... 559s Unpacking r-cran-rmarkdown (2.28+dfsg-1) ... 559s Selecting previously unselected package r-cran-htmlwidgets. 559s Preparing to unpack .../293-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 559s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 559s Selecting previously unselected package r-cran-miniui. 559s Preparing to unpack .../294-r-cran-miniui_0.1.1.1-3build1_all.deb ... 559s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 559s Selecting previously unselected package r-cran-shinyjs. 559s Preparing to unpack .../295-r-cran-shinyjs_2.1.0-1_all.deb ... 559s Unpacking r-cran-shinyjs (2.1.0-1) ... 559s Selecting previously unselected package r-cran-colourpicker. 559s Preparing to unpack .../296-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 559s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 559s Selecting previously unselected package r-cran-conquer. 560s Preparing to unpack .../297-r-cran-conquer_1.3.3-1_arm64.deb ... 560s Unpacking r-cran-conquer (1.3.3-1) ... 560s Selecting previously unselected package r-cran-cowplot. 560s Preparing to unpack .../298-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 560s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 560s Selecting previously unselected package r-cran-lazyeval. 560s Preparing to unpack .../299-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 560s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 560s Selecting previously unselected package r-cran-crosstalk. 560s Preparing to unpack .../300-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 560s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 560s Selecting previously unselected package r-cran-deldir. 560s Preparing to unpack .../301-r-cran-deldir_2.0-4-1build1_arm64.deb ... 560s Unpacking r-cran-deldir (2.0-4-1build1) ... 560s Selecting previously unselected package r-cran-deoptimr. 560s Preparing to unpack .../302-r-cran-deoptimr_1.1-3-1-1_all.deb ... 560s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 560s Selecting previously unselected package r-cran-desc. 560s Preparing to unpack .../303-r-cran-desc_1.4.3-1_all.deb ... 560s Unpacking r-cran-desc (1.4.3-1) ... 560s Selecting previously unselected package r-cran-diffobj. 560s Preparing to unpack .../304-r-cran-diffobj_0.3.5-1_arm64.deb ... 560s Unpacking r-cran-diffobj (0.3.5-1) ... 562s Selecting previously unselected package r-cran-dotcall64. 562s Preparing to unpack .../305-r-cran-dotcall64_1.1-1-1_arm64.deb ... 562s Unpacking r-cran-dotcall64 (1.1-1-1) ... 562s Selecting previously unselected package r-cran-sitmo. 562s Preparing to unpack .../306-r-cran-sitmo_2.0.2-1_arm64.deb ... 562s Unpacking r-cran-sitmo (2.0.2-1) ... 562s Selecting previously unselected package r-cran-dqrng. 562s Preparing to unpack .../307-r-cran-dqrng_0.3.2+dfsg-1_arm64.deb ... 562s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 562s Selecting previously unselected package r-cran-fastdummies. 562s Preparing to unpack .../308-r-cran-fastdummies_1.7.4-1_all.deb ... 562s Unpacking r-cran-fastdummies (1.7.4-1) ... 562s Selecting previously unselected package r-cran-fitdistrplus. 562s Preparing to unpack .../309-r-cran-fitdistrplus_1.2-1-1_all.deb ... 562s Unpacking r-cran-fitdistrplus (1.2-1-1) ... 562s Selecting previously unselected package r-cran-fnn. 562s Preparing to unpack .../310-r-cran-fnn_1.1.4.1-1_arm64.deb ... 562s Unpacking r-cran-fnn (1.1.4.1-1) ... 562s Selecting previously unselected package r-cran-gtools. 562s Preparing to unpack .../311-r-cran-gtools_3.9.5-1_arm64.deb ... 562s Unpacking r-cran-gtools (3.9.5-1) ... 562s Selecting previously unselected package r-cran-gdata. 562s Preparing to unpack .../312-r-cran-gdata_3.0.1-1_all.deb ... 562s Unpacking r-cran-gdata (3.0.1-1) ... 562s Selecting previously unselected package r-cran-ggrepel. 562s Preparing to unpack .../313-r-cran-ggrepel_0.9.5-2_arm64.deb ... 562s Unpacking r-cran-ggrepel (0.9.5-2) ... 562s Selecting previously unselected package r-cran-ggridges. 562s Preparing to unpack .../314-r-cran-ggridges_0.5.6-1_all.deb ... 562s Unpacking r-cran-ggridges (0.5.6-1) ... 562s Selecting previously unselected package r-cran-goftest. 562s Preparing to unpack .../315-r-cran-goftest_1.2-3-1_arm64.deb ... 562s Unpacking r-cran-goftest (1.2-3-1) ... 562s Selecting previously unselected package r-cran-gplots. 562s Preparing to unpack .../316-r-cran-gplots_3.2.0-1_all.deb ... 562s Unpacking r-cran-gplots (3.2.0-1) ... 562s Selecting previously unselected package r-cran-gridextra. 562s Preparing to unpack .../317-r-cran-gridextra_2.3-3build1_all.deb ... 562s Unpacking r-cran-gridextra (2.3-3build1) ... 562s Selecting previously unselected package r-cran-rprojroot. 562s Preparing to unpack .../318-r-cran-rprojroot_2.0.4-1_all.deb ... 562s Unpacking r-cran-rprojroot (2.0.4-1) ... 562s Selecting previously unselected package r-cran-here. 562s Preparing to unpack .../319-r-cran-here_1.0.1-2_all.deb ... 562s Unpacking r-cran-here (1.0.1-2) ... 562s Selecting previously unselected package r-cran-ica. 562s Preparing to unpack .../320-r-cran-ica_1.0-3-1_all.deb ... 562s Unpacking r-cran-ica (1.0-3-1) ... 562s Selecting previously unselected package r-cran-igraph. 562s Preparing to unpack .../321-r-cran-igraph_2.0.3-1_arm64.deb ... 562s Unpacking r-cran-igraph (2.0.3-1) ... 562s Selecting previously unselected package r-cran-irlba. 562s Preparing to unpack .../322-r-cran-irlba_2.3.5.1-4_arm64.deb ... 562s Unpacking r-cran-irlba (2.3.5.1-4) ... 562s Selecting previously unselected package r-cran-kernlab. 562s Preparing to unpack .../323-r-cran-kernlab_0.9-33-1_arm64.deb ... 562s Unpacking r-cran-kernlab (0.9-33-1) ... 562s Selecting previously unselected package r-cran-rcpptoml. 562s Preparing to unpack .../324-r-cran-rcpptoml_0.2.2+dfsg-1_arm64.deb ... 562s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 562s Selecting previously unselected package r-cran-png. 562s Preparing to unpack .../325-r-cran-png_0.1-8-1build2_arm64.deb ... 562s Unpacking r-cran-png (0.1-8-1build2) ... 562s Selecting previously unselected package r-cran-reticulate. 562s Preparing to unpack .../326-r-cran-reticulate_1.39.0+dfsg-1_arm64.deb ... 562s Unpacking r-cran-reticulate (1.39.0+dfsg-1) ... 562s Selecting previously unselected package r-cran-leiden. 562s Preparing to unpack .../327-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 562s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 562s Selecting previously unselected package r-cran-zoo. 562s Preparing to unpack .../328-r-cran-zoo_1.8-12-2_arm64.deb ... 562s Unpacking r-cran-zoo (1.8-12-2) ... 562s Selecting previously unselected package r-cran-lmtest. 562s Preparing to unpack .../329-r-cran-lmtest_0.9.40-1_arm64.deb ... 562s Unpacking r-cran-lmtest (0.9.40-1) ... 562s Selecting previously unselected package r-cran-mathjaxr. 562s Preparing to unpack .../330-r-cran-mathjaxr_1.6-0-1_all.deb ... 562s Unpacking r-cran-mathjaxr (1.6-0-1) ... 563s Selecting previously unselected package r-cran-matrixmodels. 563s Preparing to unpack .../331-r-cran-matrixmodels_0.5-3-1_all.deb ... 563s Unpacking r-cran-matrixmodels (0.5-3-1) ... 563s Selecting previously unselected package r-cran-rbibutils. 563s Preparing to unpack .../332-r-cran-rbibutils_2.3-1_arm64.deb ... 563s Unpacking r-cran-rbibutils (2.3-1) ... 563s Selecting previously unselected package r-cran-rdpack. 563s Preparing to unpack .../333-r-cran-rdpack_2.6.2-1_all.deb ... 563s Unpacking r-cran-rdpack (2.6.2-1) ... 563s Selecting previously unselected package r-cran-mnormt. 563s Preparing to unpack .../334-r-cran-mnormt_2.1.1-2_arm64.deb ... 563s Unpacking r-cran-mnormt (2.1.1-2) ... 563s Selecting previously unselected package r-cran-sparsem. 563s Preparing to unpack .../335-r-cran-sparsem_1.84-2-1_arm64.deb ... 563s Unpacking r-cran-sparsem (1.84-2-1) ... 563s Selecting previously unselected package r-cran-quantreg. 563s Preparing to unpack .../336-r-cran-quantreg_5.99.1-1_arm64.deb ... 563s Unpacking r-cran-quantreg (5.99.1-1) ... 563s Selecting previously unselected package r-cran-sn. 563s Preparing to unpack .../337-r-cran-sn_2.1.1-2_all.deb ... 563s Unpacking r-cran-sn (2.1.1-2) ... 563s Selecting previously unselected package r-cran-mvtnorm. 563s Preparing to unpack .../338-r-cran-mvtnorm_1.3-3-1_arm64.deb ... 563s Unpacking r-cran-mvtnorm (1.3-3-1) ... 563s Selecting previously unselected package r-cran-tfisher. 563s Preparing to unpack .../339-r-cran-tfisher_0.2.0-3_all.deb ... 563s Unpacking r-cran-tfisher (0.2.0-3) ... 563s Selecting previously unselected package r-cran-plotrix. 563s Preparing to unpack .../340-r-cran-plotrix_3.8-4-1_all.deb ... 563s Unpacking r-cran-plotrix (3.8-4-1) ... 563s Selecting previously unselected package r-cran-th.data. 563s Preparing to unpack .../341-r-cran-th.data_1.1-2-2_all.deb ... 563s Unpacking r-cran-th.data (1.1-2-2) ... 564s Selecting previously unselected package r-cran-sandwich. 564s Preparing to unpack .../342-r-cran-sandwich_3.1-1-1_all.deb ... 564s Unpacking r-cran-sandwich (3.1-1-1) ... 564s Selecting previously unselected package r-cran-multcomp. 564s Preparing to unpack .../343-r-cran-multcomp_1.4-26-2_all.deb ... 564s Unpacking r-cran-multcomp (1.4-26-2) ... 564s Selecting previously unselected package r-cran-mutoss. 564s Preparing to unpack .../344-r-cran-mutoss_0.1-13-1_all.deb ... 564s Unpacking r-cran-mutoss (0.1-13-1) ... 564s Selecting previously unselected package r-cran-robustbase. 564s Preparing to unpack .../345-r-cran-robustbase_0.99-4-1-1_arm64.deb ... 564s Unpacking r-cran-robustbase (0.99-4-1-1) ... 564s Selecting previously unselected package r-cran-qqconf. 564s Preparing to unpack .../346-r-cran-qqconf_1.3.2+dfsg-1_arm64.deb ... 564s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ... 564s Selecting previously unselected package r-cran-metap. 564s Preparing to unpack .../347-r-cran-metap_1.11-1_all.deb ... 564s Unpacking r-cran-metap (1.11-1) ... 564s Selecting previously unselected package r-cran-plotly. 564s Preparing to unpack .../348-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 564s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 564s Selecting previously unselected package r-cran-segmented. 564s Preparing to unpack .../349-r-cran-segmented_2.1-3-1_all.deb ... 564s Unpacking r-cran-segmented (2.1-3-1) ... 564s Selecting previously unselected package r-cran-mixtools. 565s Preparing to unpack .../350-r-cran-mixtools_2.0.0-1_arm64.deb ... 565s Unpacking r-cran-mixtools (2.0.0-1) ... 565s Selecting previously unselected package r-cran-patchwork. 565s Preparing to unpack .../351-r-cran-patchwork_1.3.0-1_all.deb ... 565s Unpacking r-cran-patchwork (1.3.0-1) ... 565s Selecting previously unselected package r-cran-pbapply. 565s Preparing to unpack .../352-r-cran-pbapply_1.7-2-1_all.deb ... 565s Unpacking r-cran-pbapply (1.7-2-1) ... 565s Selecting previously unselected package r-cran-pkgbuild. 565s Preparing to unpack .../353-r-cran-pkgbuild_1.4.4-1_all.deb ... 565s Unpacking r-cran-pkgbuild (1.4.4-1) ... 565s Selecting previously unselected package r-cran-pkgload. 565s Preparing to unpack .../354-r-cran-pkgload_1.4.0-1_all.deb ... 565s Unpacking r-cran-pkgload (1.4.0-1) ... 565s Selecting previously unselected package r-cran-polyclip. 565s Preparing to unpack .../355-r-cran-polyclip_1.10-7-1_arm64.deb ... 565s Unpacking r-cran-polyclip (1.10-7-1) ... 565s Selecting previously unselected package r-cran-praise. 565s Preparing to unpack .../356-r-cran-praise_1.0.0-4build1_all.deb ... 565s Unpacking r-cran-praise (1.0.0-4build1) ... 565s Selecting previously unselected package r-cran-r.methodss3. 565s Preparing to unpack .../357-r-cran-r.methodss3_1.8.2-1_all.deb ... 565s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 565s Selecting previously unselected package r-cran-r.oo. 565s Preparing to unpack .../358-r-cran-r.oo_1.26.0-1_all.deb ... 565s Unpacking r-cran-r.oo (1.26.0-1) ... 565s Selecting previously unselected package r-cran-r.utils. 565s Preparing to unpack .../359-r-cran-r.utils_2.12.3-1_all.deb ... 565s Unpacking r-cran-r.utils (2.12.3-1) ... 565s Selecting previously unselected package r-cran-rann. 565s Preparing to unpack .../360-r-cran-rann_2.6.2-1_arm64.deb ... 565s Unpacking r-cran-rann (2.6.2-1) ... 565s Selecting previously unselected package r-cran-rcppannoy. 565s Preparing to unpack .../361-r-cran-rcppannoy_0.0.22-1_arm64.deb ... 565s Unpacking r-cran-rcppannoy (0.0.22-1) ... 566s Selecting previously unselected package r-cran-rcppeigen. 566s Preparing to unpack .../362-r-cran-rcppeigen_0.3.4.0.2-1_arm64.deb ... 566s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 566s Selecting previously unselected package r-cran-rcpphnsw. 566s Preparing to unpack .../363-r-cran-rcpphnsw_0.5.0+ds-1_arm64.deb ... 566s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ... 566s Selecting previously unselected package r-cran-rcppprogress. 566s Preparing to unpack .../364-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 566s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 566s Selecting previously unselected package r-cran-rocr. 566s Preparing to unpack .../365-r-cran-rocr_1.0-11-3_all.deb ... 566s Unpacking r-cran-rocr (1.0-11-3) ... 566s Selecting previously unselected package r-cran-rspectra. 566s Preparing to unpack .../366-r-cran-rspectra_0.16-2-1_arm64.deb ... 566s Unpacking r-cran-rspectra (0.16-2-1) ... 566s Selecting previously unselected package r-cran-rsvd. 566s Preparing to unpack .../367-r-cran-rsvd_1.0.5-1_all.deb ... 566s Unpacking r-cran-rsvd (1.0.5-1) ... 566s Selecting previously unselected package r-cran-rtsne. 566s Preparing to unpack .../368-r-cran-rtsne_0.17-1_arm64.deb ... 566s Unpacking r-cran-rtsne (0.17-1) ... 566s Selecting previously unselected package r-cran-scattermore. 566s Preparing to unpack .../369-r-cran-scattermore_1.2-1_arm64.deb ... 566s Unpacking r-cran-scattermore (1.2-1) ... 566s Selecting previously unselected package r-cran-sctransform. 566s Preparing to unpack .../370-r-cran-sctransform_0.4.1-1_arm64.deb ... 566s Unpacking r-cran-sctransform (0.4.1-1) ... 566s Selecting previously unselected package r-cran-sp. 567s Preparing to unpack .../371-r-cran-sp_1%3a2.1-4+dfsg-1_arm64.deb ... 567s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 567s Selecting previously unselected package r-cran-spam. 567s Preparing to unpack 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r-cran-patchwork (1.3.0-1) ... 572s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 572s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 572s Setting up r-cran-caret (6.0-94+dfsg-1) ... 572s Setting up r-cran-shiny (1.9.1+dfsg-1) ... 572s Setting up r-cran-shinyjs (2.1.0-1) ... 572s Setting up r-cran-miniui (0.1.1.1-3build1) ... 572s Setting up r-cran-rmarkdown (2.28+dfsg-1) ... 572s Setting up r-cran-conquer (1.3.3-1) ... 572s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 572s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 572s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 572s Setting up r-cran-quantreg (5.99.1-1) ... 572s Setting up r-cran-sn (2.1.1-2) ... 572s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... 572s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 572s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 572s Setting up r-cran-tfisher (0.2.0-3) ... 572s Setting up r-bioc-genomicalignments (1.42.0-2) ... 572s Setting up r-cran-metap (1.11-1) ... 572s Setting up r-bioc-rtracklayer (1.66.0-2) ... 572s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 572s Setting up r-cran-mixtools (2.0.0-1) ... 572s Setting up r-cran-seurat (5.1.0-1) ... 572s Processing triggers for man-db (2.13.0-1) ... 574s Processing triggers for install-info (7.1.1-1) ... 574s Processing triggers for libc-bin (2.40-4ubuntu1) ... 577s autopkgtest [12:08:59]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 577s autopkgtest [12:08:59]: test pkg-r-autopkgtest: [----------------------- 577s Test: Try to load the R library Seurat 577s 577s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 577s Copyright (C) 2024 The R Foundation for Statistical Computing 577s Platform: aarch64-unknown-linux-gnu 577s 577s R is free software and comes with ABSOLUTELY NO WARRANTY. 577s You are welcome to redistribute it under certain conditions. 577s Type 'license()' or 'licence()' for distribution details. 577s 577s R is a collaborative project with many contributors. 577s Type 'contributors()' for more information and 577s 'citation()' on how to cite R or R packages in publications. 577s 577s Type 'demo()' for some demos, 'help()' for on-line help, or 577s 'help.start()' for an HTML browser interface to help. 577s Type 'q()' to quit R. 577s 577s > library('Seurat') 577s Loading required package: SeuratObject 577s Loading required package: sp 580s ‘SeuratObject’ was built under R 4.4.1 but the current version is 580s 4.4.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI 580s for R may have changed 580s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current 580s version is 1.7.1; it is recomended that you reinstall ‘SeuratObject’ as 580s the ABI for ‘Matrix’ may have changed 580s 580s Attaching package: ‘SeuratObject’ 580s 580s The following objects are masked from ‘package:base’: 580s 580s intersect, t 580s 583s > 583s > 583s Other tests are currently unsupported! 583s They will be progressively added. 583s autopkgtest [12:09:05]: test pkg-r-autopkgtest: -----------------------] 584s pkg-r-autopkgtest PASS 584s autopkgtest [12:09:06]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 584s autopkgtest [12:09:06]: @@@@@@@@@@@@@@@@@@@@ summary 584s run-unit-test PASS 584s pkg-r-autopkgtest PASS 615s nova [W] Using flock in prodstack6-arm64 615s flock: timeout while waiting to get lock 615s Creating nova instance adt-plucky-arm64-r-cran-seurat-20250117-115921-juju-7f2275-prod-proposed-migration-environment-15-37298764-ddcd-47a2-b6bd-1cc3ee64b52c from image adt/ubuntu-plucky-arm64-server-20250117.img (UUID 16a981e8-12f4-4912-806e-ebb4c2361146)... 615s nova [W] Timed out waiting for f63c9de3-f33d-4ca7-9cb0-043f7f0fd40e to get deleted. 615s nova [W] Using flock in prodstack6-arm64 615s Creating nova instance adt-plucky-arm64-r-cran-seurat-20250117-115921-juju-7f2275-prod-proposed-migration-environment-15-37298764-ddcd-47a2-b6bd-1cc3ee64b52c from image adt/ubuntu-plucky-arm64-server-20250117.img (UUID 16a981e8-12f4-4912-806e-ebb4c2361146)... 615s nova [W] Timed out waiting for e789eca7-d92c-48b2-9ec0-a8faad804daf to get deleted.