0s autopkgtest [15:44:39]: starting date and time: 2025-03-15 15:44:39+0000 0s autopkgtest [15:44:39]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:44:39]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.18323ph8/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-pcict --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-40.secgroup --name adt-plucky-arm64-r-cran-pcict-20250315-154439-juju-7f2275-prod-proposed-migration-environment-15-dd149de8-6d1f-4857-b8c5-4deda7829dd1 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 157s autopkgtest [15:47:16]: testbed dpkg architecture: arm64 158s autopkgtest [15:47:17]: testbed apt version: 2.9.33 158s autopkgtest [15:47:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup 158s autopkgtest [15:47:17]: testbed release detected to be: None 159s autopkgtest [15:47:18]: updating testbed package index (apt update) 160s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 160s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 160s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 160s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 160s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 160s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 161s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 161s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 161s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1856 B] 161s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 161s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [324 kB] 161s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [14.7 kB] 161s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 161s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [268 B] 161s Fetched 1078 kB in 2s (625 kB/s) 163s Reading package lists... 163s + lsb_release --codename --short 163s + RELEASE=plucky 163s + cat 163s + [ plucky != trusty ] 163s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 163s Reading package lists... 164s Building dependency tree... 164s Reading state information... 165s Calculating upgrade... 165s Calculating upgrade... 166s The following packages will be upgraded: 166s pinentry-curses python3-jinja2 strace 166s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 166s Need to get 647 kB of archives. 166s After this operation, 11.3 kB of additional disk space will be used. 166s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 167s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-2ubuntu3 [39.2 kB] 167s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 168s Fetched 647 kB in 1s (536 kB/s) 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 168s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 168s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 168s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_arm64.deb ... 168s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 168s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 168s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 169s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 169s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 169s Setting up strace (6.13+ds-1ubuntu1) ... 169s Processing triggers for man-db (2.13.0-1) ... 170s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 170s + /usr/lib/apt/apt-helper analyze-pattern ?true 170s + uname -r 170s + sed s/\./\\./g 170s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.* 170s + apt list ?obsolete 170s + tail -n+2 170s + cut -d/ -f1 170s + grep -v ^linux-.*6\.14\.0-10-generic.* 171s + obsolete_pkgs=linux-headers-6.11.0-8-generic 171s linux-headers-6.11.0-8 171s linux-image-6.11.0-8-generic 171s linux-modules-6.11.0-8-generic 171s linux-tools-6.11.0-8-generic 171s linux-tools-6.11.0-8 171s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 171s Reading package lists... 171s Building dependency tree... 171s Reading state information... 172s Solving dependencies... 172s The following packages will be REMOVED: 172s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 172s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 172s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 172s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 173s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 173s After this operation, 267 MB disk space will be freed. 173s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 173s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 173s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 173s Removing libpython3.12t64:arm64 (3.12.9-1) ... 173s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 173s Removing libnsl2:arm64 (1.3.0-3build3) ... 173s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 173s Removing libunwind8:arm64 (1.6.2-3.1) ... 173s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 174s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 175s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 176s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 176s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 176s /etc/kernel/postrm.d/initramfs-tools: 176s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 176s /etc/kernel/postrm.d/zz-flash-kernel: 176s flash-kernel: Kernel 6.11.0-8-generic has been removed. 176s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 176s /etc/kernel/postrm.d/zz-update-grub: 176s Sourcing file `/etc/default/grub' 176s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 176s Generating grub configuration file ... 177s Found linux image: /boot/vmlinuz-6.14.0-10-generic 177s Found initrd image: /boot/initrd.img-6.14.0-10-generic 177s Warning: os-prober will not be executed to detect other bootable partitions. 177s Systems on them will not be added to the GRUB boot configuration. 177s Check GRUB_DISABLE_OS_PROBER documentation entry. 177s Adding boot menu entry for UEFI Firmware Settings ... 177s done 177s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 177s Processing triggers for libc-bin (2.41-1ubuntu1) ... 178s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 178s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 178s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 178s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 178s + grep -q trusty /etc/lsb-release 178s + [ ! -d /usr/share/doc/unattended-upgrades ] 178s + [ ! -d /usr/share/doc/lxd ] 178s + [ ! -d /usr/share/doc/lxd-client ] 178s + [ ! -d /usr/share/doc/snapd ] 178s + type iptables 178s + cat 178s + chmod 755 /etc/rc.local 178s + . /etc/rc.local 178s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 178s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 178s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 178s + uname -m 178s + [ aarch64 = ppc64le ] 178s + [ -d /run/systemd/system ] 178s + systemd-detect-virt --quiet --vm 178s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 178s + cat 178s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 178s + echo COMPRESS=lz4 178s autopkgtest [15:47:37]: upgrading testbed (apt dist-upgrade and autopurge) 178s Reading package lists... 179s Building dependency tree... 179s Reading state information... 180s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 180s Starting 2 pkgProblemResolver with broken count: 0 180s Done 181s Entering ResolveByKeep 181s 182s Calculating upgrade... 182s The following packages will be upgraded: 182s libc-bin libc-dev-bin libc6 libc6-dev locales 182s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 182s Need to get 9530 kB of archives. 182s After this operation, 0 B of additional disk space will be used. 182s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 185s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 185s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 188s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 189s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 195s Preconfiguring packages ... 195s Fetched 9530 kB in 12s (801 kB/s) 195s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 195s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 195s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 195s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 195s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 195s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 196s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 196s Setting up libc6:arm64 (2.41-1ubuntu2) ... 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 196s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 196s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 196s Setting up libc-bin (2.41-1ubuntu2) ... 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 196s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 196s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 197s Setting up locales (2.41-1ubuntu2) ... 198s Generating locales (this might take a while)... 200s en_US.UTF-8... done 200s Generation complete. 200s Setting up libc-dev-bin (2.41-1ubuntu2) ... 200s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 200s Processing triggers for man-db (2.13.0-1) ... 201s Processing triggers for systemd (257.3-1ubuntu3) ... 202s Reading package lists... 203s Building dependency tree... 203s Reading state information... 204s Starting pkgProblemResolver with broken count: 0 204s Starting 2 pkgProblemResolver with broken count: 0 204s Done 204s Solving dependencies... 205s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 206s autopkgtest [15:48:05]: rebooting testbed after setup commands that affected boot 230s autopkgtest [15:48:29]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 233s autopkgtest [15:48:32]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-pcict 236s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-pcict 0.5-4.4-1 (dsc) [2086 B] 236s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-pcict 0.5-4.4-1 (tar) [29.2 kB] 236s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-pcict 0.5-4.4-1 (diff) [2512 B] 236s gpgv: Signature made Mon Feb 20 13:31:12 2023 UTC 236s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 236s gpgv: issuer "tille@debian.org" 236s gpgv: Can't check signature: No public key 236s dpkg-source: warning: cannot verify inline signature for ./r-cran-pcict_0.5-4.4-1.dsc: no acceptable signature found 236s autopkgtest [15:48:35]: testing package r-cran-pcict version 0.5-4.4-1 237s autopkgtest [15:48:36]: build not needed 242s autopkgtest [15:48:41]: test run-unit-test: preparing testbed 242s Reading package lists... 243s Building dependency tree... 243s Reading state information... 244s Starting pkgProblemResolver with broken count: 0 244s Starting 2 pkgProblemResolver with broken count: 0 244s Done 246s The following NEW packages will be installed: 246s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 246s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1 246s libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 246s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 246s libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 246s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 246s libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-pcict r-cran-runit 246s unzip x11-common xdg-utils zip 246s 0 upgraded, 46 newly installed, 0 to remove and 0 not upgraded. 246s Need to get 38.8 MB of archives. 246s After this operation, 80.1 MB of additional disk space will be used. 246s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 247s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 248s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 248s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 248s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 249s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 249s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 249s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 249s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 249s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 249s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 250s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 250s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 250s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 251s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 251s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 251s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 252s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 252s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 252s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 253s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 253s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 257s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 257s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 257s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 257s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB] 257s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB] 257s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB] 258s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 258s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 258s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 258s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 258s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 259s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 259s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 259s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 260s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 260s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 260s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 261s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 261s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 262s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 262s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 262s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 307s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pcict arm64 0.5-4.4-1 [94.0 kB] 307s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-runit all 0.4.33-1 [377 kB] 308s Preconfiguring packages ... 308s Fetched 38.8 MB in 1min 2s (629 kB/s) 308s Selecting previously unselected package fonts-dejavu-mono. 308s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 308s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 308s Unpacking fonts-dejavu-mono (2.37-8) ... 309s Selecting previously unselected package fonts-dejavu-core. 309s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 309s Unpacking fonts-dejavu-core (2.37-8) ... 309s Selecting previously unselected package fontconfig-config. 309s Preparing to unpack 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(7.1.1-1) ... 318s autopkgtest [15:49:57]: test run-unit-test: [----------------------- 318s BEGIN TEST bootstrap.R 319s 319s R version 4.4.3 (2025-02-28) -- "Trophy Case" 319s Copyright (C) 2025 The R Foundation for Statistical Computing 319s Platform: aarch64-unknown-linux-gnu 319s 319s R is free software and comes with ABSOLUTELY NO WARRANTY. 319s You are welcome to redistribute it under certain conditions. 319s Type 'license()' or 'licence()' for distribution details. 319s 319s R is a collaborative project with many contributors. 319s Type 'contributors()' for more information and 319s 'citation()' on how to cite R or R packages in publications. 319s 319s Type 'demo()' for some demos, 'help()' for on-line help, or 319s 'help.start()' for an HTML browser interface to help. 319s Type 'q()' to quit R. 319s 319s > 319s > if(require("RUnit", quietly=TRUE)) { 319s + ## Run all the tests 319s + wd <- getwd() 319s + testsuite <- defineTestSuite("PCICt", dirs=wd, testFileRegexp = "^test_functions.R$", testFuncRegexp = "^PCICt.test.+") 319s + PCICt.test.result <- runTestSuite(testsuite, useOwnErrorHandler=F) 319s + printTextProtocol(PCICt.test.result) 319s + } 319s 319s 319s Executing test function PCICt.test.as.PCICt ... Error in as.POSIXlt.character(x, tz, format, ...) : 319s character string is not in a standard unambiguous format 319s In addition: Warning messages: 319s 1: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) : 319s RNGkind: Marsaglia-Multicarry has poor statistical properties 319s 2: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) : 319s RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry 319s Error in as.POSIXlt.character(x, tz, format, ...) : 319s character string is not in a standard unambiguous format 319s Error in as.PCICt.default(gregorian.not.360, cal = "360") : 319s 'missing(res)' did not find an argument 319s Error in as.PCICt.default("your mom", cal = "360") : 319s 'missing(res)' did not find an argument 319s Error in as.POSIXlt.character(x, tz, format, ...) : 319s character string is not in a standard unambiguous format 319s done successfully. 319s 319s 319s 319s Executing test function PCICt.test.as.POSIXct ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.as.POSIXlt ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.c ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.cut ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.format ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.julian ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.operators ... Error in `-.PCICt`(test.365, test.greg) : 319s attr(e1, "cal") == attr(e2, "cal") is not TRUE 319s Error in `-.PCICt`(test.365, test.greg) : 319s attr(e1, "cal") == attr(e2, "cal") is not TRUE 319s done successfully. 319s 319s 319s 319s Executing test function PCICt.test.pretty ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.range ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.round ... Error in `[<-.PCICt`(`*tmp*`, 1:3, value = structure(c(1314144000, 1311292800, : 319s class(value) == class(x) & attr(x, "cal") == attr(value, "cal") is not TRUE 319s done successfully. 319s 319s 319s 319s Executing test function PCICt.test.seq ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.subset ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.summary ... done successfully. 319s 319s 319s 319s Executing test function PCICt.test.trunc ... done successfully. 319s 319s RUNIT TEST PROTOCOL -- Sat Mar 15 15:49:58 2025 319s *********************************************** 319s Number of test functions: 15 319s Number of errors: 0 319s Number of failures: 0 319s 319s 319s 1 Test Suite : 319s PCICt - 15 test functions, 0 errors, 0 failures 319s 319s 319s 319s Details 319s *************************** 319s Test Suite: PCICt 319s Test function regexp: ^PCICt.test.+ 319s Test file regexp: ^test_functions.R$ 319s Involved directory: 319s /tmp/autopkgtest.xVE2ea/autopkgtest_tmp 319s --------------------------- 319s Test file: /tmp/autopkgtest.xVE2ea/autopkgtest_tmp/test_functions.R 319s PCICt.test.as.PCICt: (102 checks) ... OK (0.09 seconds) 319s PCICt.test.as.POSIXct: (0 checks) ... OK (0 seconds) 319s PCICt.test.as.POSIXlt: (0 checks) ... OK (0 seconds) 319s PCICt.test.c: (0 checks) ... OK (0 seconds) 319s PCICt.test.cut: (0 checks) ... OK (0 seconds) 319s PCICt.test.format: (0 checks) ... OK (0 seconds) 319s PCICt.test.julian: (0 checks) ... OK (0 seconds) 319s PCICt.test.operators: (8 checks) ... OK (0.01 seconds) 319s PCICt.test.pretty: (0 checks) ... OK (0 seconds) 319s PCICt.test.range: (0 checks) ... OK (0 seconds) 319s PCICt.test.round: (12 checks) ... OK (0.01 seconds) 319s PCICt.test.seq: (6 checks) ... OK (0.01 seconds) 319s PCICt.test.subset: (5 checks) ... OK (0 seconds) 319s PCICt.test.summary: (0 checks) ... OK (0 seconds) 319s PCICt.test.trunc: (12 checks) ... OK (0.01 seconds) 319s > 319s BEGIN TEST test_functions.R 319s 319s R version 4.4.3 (2025-02-28) -- "Trophy Case" 319s Copyright (C) 2025 The R Foundation for Statistical Computing 319s Platform: aarch64-unknown-linux-gnu 319s 319s R is free software and comes with ABSOLUTELY NO WARRANTY. 319s You are welcome to redistribute it under certain conditions. 319s Type 'license()' or 'licence()' for distribution details. 319s 319s R is a collaborative project with many contributors. 319s Type 'contributors()' for more information and 319s 'citation()' on how to cite R or R packages in publications. 319s 319s Type 'demo()' for some demos, 'help()' for on-line help, or 319s 'help.start()' for an HTML browser interface to help. 319s Type 'q()' to quit R. 319s 319s > library(PCICt) 319s > library(RUnit) 319s > 319s > test.values <- c("1850-01-01", "2012-04-01 00:10:00", "2012-02-28", "1599-01-01", "1582-10-04", "1582-10-03", "900-02-28", "900-03-01", "200-03-01", "1-01-01", "0-01-01") 319s > 319s > ## Tests as.pcict functions 319s > PCICt.test.as.PCICt <- function() { 319s + test.calendars <- c("360", "365", "gregorian", "proleptic_gregorian") 319s + cal.360.only <- c("2011-02-30") 319s + gregorian.not.365 <- c("2012-02-29") 319s + gregorian.not.360 <- c("2011-01-31") 319s + 319s + ## Check that valid input produces valid output for all calendar types 319s + for(cal in test.calendars) { 319s + for(i in seq_along(test.values)) { 319s + checkEquals(as.character(as.PCICt(test.values[i], cal=cal)), test.values[i]) 319s + 319s + ## Check that as.PCICt.POSIXlt works as expected 319s + checkEquals(as.character(as.PCICt(as.POSIXlt(test.values[i]), cal=cal)), test.values[i]) 319s + 319s + ## Check that as.PCICt.POSIXct works as expected 319s + ##checkEquals(as.character(as.PCICt(as.POSIXct(test.values[i]), cal=cal)), test.values[i]) 319s + } 319s + } 319s + 319s + ## Check factor case 319s + checkEquals(as.PCICt(as.factor(gregorian.not.365), cal="360"), as.PCICt(gregorian.not.365, cal="360")) 319s + 319s + ## Check that invalid input triggers errors 319s + checkException(as.PCICt(cal.360.only, cal="365")) 319s + checkException(as.PCICt(cal.360.only, cal="gregorian")) 319s + 319s + ## Should fail but doesn't; not sure how to hack it other than to pass in month lengths to the so-called "360" funcs. 319s + ##checkException(as.PCICt(gregorian.not.365, cal="365")) 319s + 319s + checkException(as.PCICt(gregorian.not.360, cal="360")) 319s + checkException(as.PCICt("your mom", cal="360")) 319s + checkException(as.PCICt("your mom", cal="365")) 319s + 319s + ## Check that NAs are passed through properly 319s + checkTrue(is.na(as.PCICt(NA, cal="360"))) 319s + checkTrue(is.na(as.PCICt(NA, cal="365"))) 319s + 319s + ## Check numeric input... 319s + checkEquals(as.PCICt(86400, origin="1961-01-01", cal="360"), as.PCICt("1961-01-02", cal="360")) 319s + 319s + ## Check several cases for the 360 sub-second string formatting 319s + date.360 <- as.PCICt("2012-02-28 12:34:56.7", cal="360") 319s + checkEquals(as.character(date.360, "%M:%OS1"), "34:56.7") 319s + checkEquals(as.character(date.360, "%M:%OS2"), "34:56.70") 319s + checkEquals(as.character(date.360, "%M:%OS6"), "34:56.700000") 319s + checkEquals(as.character(date.360, "%M:%OS7"), "34:56.700000") 319s + checkEquals(as.character(date.360, "%M:%OSx"), "34:56x") 319s + } 319s > 319s > ## Tests subset operators 319s > PCICt.test.subset <- function() { 319s + dat <- as.PCICt(test.values, cal="365") 319s + dat2 <- dat[2:4] 319s + dat3 <- dat 319s + dat3[1:2] <- dat[2:3] 319s + 319s + ## Check that subset operator works as expected 319s + checkEquals(as.character(dat[2:4]), as.character(dat)[2:4]) 319s + 319s + ## Check that subset operator preserves attributes properly 319s + checkEquals(attr(dat2, "cal"), attr(dat, "cal")) 319s + checkEquals(attr(dat3, "cal"), attr(dat, "cal")) 319s + 319s + ## Check assignment 319s + checkEquals(dat3[1:4], dat[c(2, 3, 3, 4)]) 319s + 319s + ## Check exception handling 319s + dat.360 <- as.PCICt(test.values, cal="360") 319s + checkException(dat3[1:3] <- dat.360[2:4]) 319s + } 319s > 319s > ## Tests arithmetic operators (+, -) 319s > PCICt.test.operators <- function() { 319s + test.365 <- as.PCICt(test.values, cal="365") 319s + test.greg <- as.PCICt(test.values, cal="gregorian") 319s + 319s + ## Check edge cases for each calendar for addition (isn't February a great month?) 319s + checkEquals(as.character(as.PCICt("2012-02-28", cal="365") + 86400), "2012-03-01") 319s + checkEquals(as.character(as.PCICt("2011-02-28", cal="360") + 2 * 86400), "2011-02-30") 319s + checkEquals(as.character(as.PCICt("2012-02-28", cal="gregorian") + 86400), "2012-02-29") 319s + 319s + ## FIXME: CHECK THAT SUBTRACTION GIVES A DIFFTIME OBJECT 319s + checkException(test.365 - test.greg) 319s + checkException(test.365 - test.greg) 319s + 319s + ## Check edge cases for each calendar for subtraction 319s + checkEquals(as.numeric(as.PCICt("2012-03-01", cal="365") - as.PCICt("2012-02-28", cal="365"), units="secs"), as.numeric(as.difftime("24:00:00"), units="secs")) 319s + checkEquals(as.numeric(as.PCICt("2011-03-01", cal="360") - as.PCICt("2011-02-30", cal="360"), units="secs"), as.numeric(as.difftime("24:00:00"), units="secs")) 319s + checkEquals(as.numeric(as.PCICt("2012-03-01", cal="gregorian") - as.PCICt("2012-02-29", cal="gregorian"), units="secs"), as.numeric(as.difftime("24:00:00"), units="secs")) 319s + } 319s > 319s > ## Tests the truncate function 319s > PCICt.test.trunc <- function() { 319s + date.360 <- as.PCICt("2012-02-28 12:34:56.7", cal="360") 319s + date.365 <- as.PCICt("2012-02-28 12:34:56.7", cal="365") 319s + date.gregorian <- as.PCICt("2012-02-28 12:34:56.7", cal="gregorian") 319s + 319s + results <- c("2012-02-28 12:34:56", "2012-02-28 12:34:00", "2012-02-28 12:00:00", "2012-02-28") 319s + round.to <- c("secs", "mins", "hours", "days") 319s + 319s + for(i in 1:length(results)) { 319s + checkEquals(as.character(trunc(date.360, round.to[i])), results[i]) 319s + checkEquals(as.character(trunc(date.365, round.to[i])), results[i]) 319s + checkEquals(as.character(trunc(date.gregorian, round.to[i])), results[i]) 319s + } 319s + } 319s > 319s > ## Tests the round function 319s > PCICt.test.round <- function() { 319s + date.360 <- as.PCICt("2012-02-28 12:34:56.7", cal="360") 319s + date.365 <- as.PCICt("2012-02-28 12:34:56.7", cal="365") 319s + date.gregorian <- as.PCICt("2012-02-28 12:34:56.7", cal="gregorian") 319s + 319s + results <- c("2012-02-28 12:34:57", "2012-02-28 12:35:00", "2012-02-28 13:00:00") 319s + results.days <- c("2012-02-29", "2012-03-01", "2012-02-29") 319s + round.to <- c("secs", "mins", "hours") 319s + 319s + for(i in 1:length(results)) { 319s + checkEquals(as.character(round(date.360, round.to[i])), results[i]) 319s + checkEquals(as.character(round(date.365, round.to[i])), results[i]) 319s + checkEquals(as.character(round(date.gregorian, round.to[i])), results[i]) 319s + } 319s + checkEquals(as.character(round(date.360, "days")), results.days[1]) 319s + checkEquals(as.character(round(date.365, "days")), results.days[2]) 319s + checkEquals(as.character(round(date.gregorian, "days")), results.days[3]) 319s + } 319s > 319s > ## Tests the cut function 319s > PCICt.test.cut <- function() { 319s + } 319s > 319s > PCICt.test.summary <- function() { 319s + } 319s > 319s > PCICt.test.format <- function() { 319s + } 319s > 319s > PCICt.test.as.POSIXlt <- function() { 319s + } 319s > 319s > PCICt.test.as.POSIXct <- function() { 319s + } 319s > 319s > PCICt.test.julian <- function() { 319s + } 319s > 319s > PCICt.test.range <- function() { 319s + } 319s > 319s > PCICt.test.pretty <- function() { 319s + } 319s > 319s > PCICt.test.c <- function() { 319s + } 319s > 319s > PCICt.test.seq <- function() { 319s + ## Check that sequences work as expected 319s + checkEquals(seq(as.PCICt("2011-02-30", cal="360"), as.PCICt("2012-04-01 00:10:00", cal="360"), by="years"), as.PCICt(c("2011-02-30", "2012-02-30"), cal="360")) 319s + checkEquals(seq(as.PCICt("2011-02-28", cal="365"), as.PCICt("2012-04-01 00:10:00", cal="365"), by="years"), as.PCICt(c("2011-02-28", "2012-02-28"), cal="365")) 319s + checkEquals(seq(as.PCICt("2011-02-28", cal="gregorian"), as.PCICt("2012-04-01 00:10:00", cal="gregorian"), by="years"), as.PCICt(c("2011-02-28", "2012-02-28"), cal="gregorian")) 319s + 319s + checkEquals(seq(as.PCICt("2011-02-30", cal="360"), as.PCICt("2011-03-03 00:10:00", cal="360"), by="days"), as.PCICt(c("2011-02-30", "2011-03-01", "2011-03-02", "2011-03-03"), cal="360")) 319s + checkEquals(seq(as.PCICt("2012-02-28", cal="365"), as.PCICt("2012-03-03 00:10:00", cal="365"), by="days"), as.PCICt(c("2012-02-28", "2012-03-01", "2012-03-02", "2012-03-03"), cal="365")) 319s + checkEquals(seq(as.PCICt("2012-02-28", cal="gregorian"), as.PCICt("2012-03-03 00:10:00", cal="gregorian"), by="days"), as.PCICt(c("2012-02-28", "2012-02-29", "2012-03-01", "2012-03-02", "2012-03-03"), cal="gregorian")) 319s + 319s + } 319s > 320s autopkgtest [15:49:59]: test run-unit-test: -----------------------] 320s autopkgtest [15:49:59]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 320s run-unit-test PASS 321s autopkgtest [15:50:00]: test pkg-r-autopkgtest: preparing testbed 321s Reading package lists... 322s Building dependency tree... 322s Reading state information... 322s Starting pkgProblemResolver with broken count: 0 323s Starting 2 pkgProblemResolver with broken count: 0 323s Done 324s The following NEW packages will be installed: 324s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 324s dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 324s gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 324s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 324s libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 324s libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 324s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 324s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 324s libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev 324s libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev 324s zlib1g-dev 324s 0 upgraded, 54 newly installed, 0 to remove and 0 not upgraded. 324s Need to get 92.7 MB of archives. 324s After this operation, 334 MB of additional disk space will be used. 324s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 325s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 325s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB] 338s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B] 338s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 338s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 338s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB] 338s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB] 338s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB] 342s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB] 343s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB] 347s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB] 348s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB] 350s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB] 353s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB] 376s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB] 377s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 377s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 377s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB] 379s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB] 393s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB] 393s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 393s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 393s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 393s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 393s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB] 394s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB] 407s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB] 407s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 407s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 407s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 408s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 408s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 408s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 408s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 424s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 424s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 424s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 424s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 430s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 430s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 430s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 430s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 430s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 431s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 431s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 432s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB] 433s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 433s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB] 433s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 433s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 433s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 433s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B] 433s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 434s Fetched 92.7 MB in 1min 49s (849 kB/s) 434s Selecting previously unselected package libisl23:arm64. 434s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83899 files and directories currently installed.) 434s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ... 434s Unpacking libisl23:arm64 (0.27-1) ... 434s Selecting previously unselected package libmpc3:arm64. 434s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ... 434s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 434s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 434s Preparing to unpack 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... 437s Selecting previously unselected package build-essential. 437s Preparing to unpack .../23-build-essential_12.10ubuntu1_arm64.deb ... 437s Unpacking build-essential (12.10ubuntu1) ... 437s Selecting previously unselected package dctrl-tools. 437s Preparing to unpack .../24-dctrl-tools_2.24-3build3_arm64.deb ... 437s Unpacking dctrl-tools (2.24-3build3) ... 437s Selecting previously unselected package libgfortran-14-dev:arm64. 437s Preparing to unpack .../25-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ... 437s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 437s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 437s Preparing to unpack .../26-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 437s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 437s Selecting previously unselected package gfortran-14. 437s Preparing to unpack .../27-gfortran-14_14.2.0-17ubuntu3_arm64.deb ... 437s Unpacking gfortran-14 (14.2.0-17ubuntu3) 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libdeflate-dev:arm64. 438s Preparing to unpack .../33-libdeflate-dev_1.23-1_arm64.deb ... 438s Unpacking libdeflate-dev:arm64 (1.23-1) ... 438s Selecting previously unselected package libicu-dev:arm64. 438s Preparing to unpack .../34-libicu-dev_76.1-1ubuntu2_arm64.deb ... 438s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 438s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 438s Preparing to unpack .../35-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 438s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 438s Selecting previously unselected package libjpeg8-dev:arm64. 439s Preparing to unpack .../36-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 439s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 439s Selecting previously unselected package libjpeg-dev:arm64. 439s Preparing to unpack .../37-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 439s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 439s Selecting previously unselected package liblapack-dev:arm64. 439s Preparing to 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libreadline-dev:arm64 (8.2-6) ... 440s Setting up libpcre2-16-0:arm64 (10.45-1) ... 440s Setting up libpcre2-32-0:arm64 (10.45-1) ... 440s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 440s Setting up libpkgconf3:arm64 (1.8.1-4) ... 440s Setting up libmpc3:arm64 (1.3.1-1build2) ... 440s Setting up icu-devtools (76.1-1ubuntu2) ... 440s Setting up pkgconf-bin (1.8.1-4) ... 440s Setting up liblzma-dev:arm64 (5.6.4-1) ... 440s Setting up libubsan1:arm64 (15-20250222-0ubuntu1) ... 440s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 440s Setting up libpcre2-posix3:arm64 (10.45-1) ... 440s Setting up libhwasan0:arm64 (15-20250222-0ubuntu1) ... 440s Setting up libasan8:arm64 (15-20250222-0ubuntu1) ... 440s Setting up libtsan2:arm64 (15-20250222-0ubuntu1) ... 440s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 440s Setting up libisl23:arm64 (0.27-1) ... 440s Setting up libdeflate-dev:arm64 (1.23-1) ... 440s Setting up libicu-dev:arm64 (76.1-1ubuntu2) ... 440s Setting up libcc1-0:arm64 (15-20250222-0ubuntu1) ... 440s Setting up liblsan0:arm64 (15-20250222-0ubuntu1) ... 440s Setting up libblas-dev:arm64 (3.12.1-2) ... 440s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 440s Setting up dctrl-tools (2.24-3build3) ... 440s Setting up libitm1:arm64 (15-20250222-0ubuntu1) ... 440s Setting up libbz2-dev:arm64 (1.0.8-6) ... 440s Setting up libpcre2-dev:arm64 (10.45-1) ... 440s Setting up libpng-dev:arm64 (1.6.47-1) ... 440s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 440s Setting up pkgconf:arm64 (1.8.1-4) ... 440s Setting up liblapack-dev:arm64 (3.12.1-2) ... 440s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 440s Setting up cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 440s Setting up libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 440s Setting up libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 440s Setting up libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 440s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 440s Setting up cpp-14 (14.2.0-17ubuntu3) ... 440s Setting up cpp (4:14.2.0-1ubuntu1) ... 440s Setting up gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 440s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 440s Setting up g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 440s Setting up gcc-14 (14.2.0-17ubuntu3) ... 440s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 440s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 440s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 440s Setting up g++-14 (14.2.0-17ubuntu3) ... 440s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 440s Setting up gcc (4:14.2.0-1ubuntu1) ... 440s Setting up g++ (4:14.2.0-1ubuntu1) ... 440s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 440s Setting up build-essential (12.10ubuntu1) ... 440s Setting up gfortran (4:14.2.0-1ubuntu1) ... 440s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 440s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 440s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 440s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 440s Setting up r-base-dev (4.4.3-1) ... 440s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 440s Processing triggers for libc-bin (2.41-1ubuntu2) ... 440s Processing triggers for man-db (2.13.0-1) ... 441s Processing triggers for install-info (7.1.1-1) ... 442s autopkgtest [15:52:01]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 442s autopkgtest [15:52:01]: test pkg-r-autopkgtest: [----------------------- 443s Test: Try to load the R library PCICt 443s 443s R version 4.4.3 (2025-02-28) -- "Trophy Case" 443s Copyright (C) 2025 The R Foundation for Statistical Computing 443s Platform: aarch64-unknown-linux-gnu 443s 443s R is free software and comes with ABSOLUTELY NO WARRANTY. 443s You are welcome to redistribute it under certain conditions. 443s Type 'license()' or 'licence()' for distribution details. 443s 443s R is a collaborative project with many contributors. 443s Type 'contributors()' for more information and 443s 'citation()' on how to cite R or R packages in publications. 443s 443s Type 'demo()' for some demos, 'help()' for on-line help, or 443s 'help.start()' for an HTML browser interface to help. 443s Type 'q()' to quit R. 443s 443s > library('PCICt') 443s > 443s > 443s Other tests are currently unsupported! 443s They will be progressively added. 443s autopkgtest [15:52:02]: test pkg-r-autopkgtest: -----------------------] 444s pkg-r-autopkgtest PASS 444s autopkgtest [15:52:03]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 444s autopkgtest [15:52:03]: @@@@@@@@@@@@@@@@@@@@ summary 444s run-unit-test PASS 444s pkg-r-autopkgtest PASS 465s nova [W] Using flock in prodstack6-arm64 465s Creating nova instance adt-plucky-arm64-r-cran-pcict-20250315-154439-juju-7f2275-prod-proposed-migration-environment-15-dd149de8-6d1f-4857-b8c5-4deda7829dd1 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 465s nova [W] Timed out waiting for d2a2d757-2614-4aa3-8ffd-3919ea53b08e to get deleted.