0s autopkgtest [19:05:11]: starting date and time: 2025-02-03 19:05:11+0000 0s autopkgtest [19:05:11]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [19:05:11]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.k583tc72/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-testthat --apt-upgrade r-cran-msm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-2.secgroup --name adt-plucky-arm64-r-cran-msm-20250203-182335-juju-7f2275-prod-proposed-migration-environment-20-019af954-81bb-4fb4-9a3a-d46c9ade91b4 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 253s autopkgtest [19:09:24]: testbed dpkg architecture: arm64 254s autopkgtest [19:09:25]: testbed apt version: 2.9.18 255s autopkgtest [19:09:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup 255s autopkgtest [19:09:26]: testbed release detected to be: None 256s autopkgtest [19:09:27]: updating testbed package index (apt update) 257s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 257s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 257s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 258s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 258s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 258s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [884 kB] 263s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.4 kB] 264s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 265s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [829 kB] 271s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4536 B] 272s Fetched 2031 kB in 15s (135 kB/s) 272s Reading package lists... 273s Reading package lists... 274s Building dependency tree... 274s Reading state information... 274s Calculating upgrade... 275s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 275s Reading package lists... 275s Building dependency tree... 275s Reading state information... 276s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 276s autopkgtest [19:09:47]: upgrading testbed (apt dist-upgrade and autopurge) 276s Reading package lists... 276s Building dependency tree... 276s Reading state information... 277s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 277s Starting 2 pkgProblemResolver with broken count: 0 277s Done 277s Entering ResolveByKeep 278s 278s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 278s Reading package lists... 279s Building dependency tree... 279s Reading state information... 279s Starting pkgProblemResolver with broken count: 0 279s Starting 2 pkgProblemResolver with broken count: 0 279s Done 280s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 284s autopkgtest [19:09:55]: testbed running kernel: Linux 6.12.0-12-generic #12-Ubuntu SMP PREEMPT_DYNAMIC Thu Jan 23 07:24:57 UTC 2025 284s autopkgtest [19:09:55]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-msm 294s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (dsc) [2197 B] 294s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (tar) [996 kB] 294s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (diff) [4772 B] 294s gpgv: Signature made Wed Sep 25 23:42:54 2024 UTC 294s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 294s gpgv: issuer "plessy@debian.org" 294s gpgv: Can't check signature: No public key 294s dpkg-source: warning: cannot verify inline signature for ./r-cran-msm_1.8-1.dsc: no acceptable signature found 294s autopkgtest [19:10:05]: testing package r-cran-msm version 1.8-1 295s autopkgtest [19:10:06]: build not needed 298s autopkgtest [19:10:09]: test run-unit-test: preparing testbed 299s Reading package lists... 299s Building dependency tree... 299s Reading state information... 299s Starting pkgProblemResolver with broken count: 0 299s Starting 2 pkgProblemResolver with broken count: 0 299s Done 300s The following NEW packages will be installed: 300s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 300s fonts-glyphicons-halflings libblas3 libcairo2 libdatrie1 libdeflate0 300s libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 300s libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap liblapack3 liblerc4 300s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 300s libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 300s libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 300s libxss1 libxt6t64 littler node-html5shiv r-base-core r-cran-askpass 300s r-cran-brio r-cran-callr r-cran-cli r-cran-codetools r-cran-covr 300s r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj r-cran-digest 300s r-cran-doparallel r-cran-evaluate r-cran-expm r-cran-fansi r-cran-foreach 300s r-cran-fs r-cran-generics r-cran-glue r-cran-httr r-cran-iterators 300s r-cran-jsonlite r-cran-lattice r-cran-lazyeval r-cran-lifecycle 300s r-cran-littler r-cran-magrittr r-cran-matrix r-cran-mime r-cran-minqa 300s r-cran-msm r-cran-mvtnorm r-cran-numderiv r-cran-openssl r-cran-pillar 300s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 300s r-cran-praise r-cran-processx r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rex 300s r-cran-rlang r-cran-rprojroot r-cran-survival r-cran-sys r-cran-testthat 300s r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-waldo r-cran-withr r-cran-yaml 300s unzip x11-common xdg-utils zip 300s 0 upgraded, 104 newly installed, 0 to remove and 0 not upgraded. 300s Need to get 73.0 MB of archives. 300s After this operation, 142 MB of additional disk space will be used. 300s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 302s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 303s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 303s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 303s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 303s Get:6 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 303s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB] 303s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 303s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 304s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 304s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 304s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 304s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 304s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 304s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-13ubuntu1 [437 kB] 304s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-13ubuntu1 [145 kB] 304s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 304s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 304s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 304s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 304s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 304s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 304s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 304s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB] 305s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 305s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 305s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 305s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.1-1 [238 kB] 305s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.1-1 [49.6 kB] 305s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.1-1 [27.6 kB] 305s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 305s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 305s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 305s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 305s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 305s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 305s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 305s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 305s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 305s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 305s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 305s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 305s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 306s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 306s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 306s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.2-1build1 [28.4 MB] 307s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 307s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 307s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 307s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 307s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 307s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 307s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.8.1-1 [395 kB] 307s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 308s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.5-1 [354 kB] 308s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 308s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB] 308s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 308s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 308s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB] 308s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 308s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rex all 1.2.1-1 [129 kB] 308s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-curl arm64 6.1.0+dfsg-1 [194 kB] 308s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 308s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-openssl arm64 2.2.0+dfsg-1 [404 kB] 308s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 308s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 308s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 308s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 308s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 308s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 308s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 308s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-iterators all 1.0.14-1 [336 kB] 308s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-foreach all 1.5.2-1 [124 kB] 308s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-doparallel all 1.0.17-1 [189 kB] 308s Get:76 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 308s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 308s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-2-1 [4153 kB] 308s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-expm arm64 1.0-0-1 [225 kB] 308s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 308s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 308s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 308s Get:83 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 308s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB] 308s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 308s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 308s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 308s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 308s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-minqa arm64 1.2.8-1 [112 kB] 308s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 308s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mvtnorm arm64 1.3-3-1 [921 kB] 308s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 308s Get:93 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 308s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 308s Get:95 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 308s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 308s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-msm arm64 1.8-1 [1552 kB] 308s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 309s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 309s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB] 309s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB] 309s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 309s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-1 [150 kB] 309s Get:104 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 311s Preconfiguring packages ... 312s Fetched 73.0 MB in 11s (6769 kB/s) 312s Selecting previously unselected package fonts-dejavu-mono. 312s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116576 files and directories currently installed.) 312s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 312s Unpacking fonts-dejavu-mono (2.37-8) ... 312s Selecting previously unselected package fonts-dejavu-core. 312s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 312s Unpacking fonts-dejavu-core (2.37-8) ... 312s Selecting previously unselected package fontconfig-config. 312s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 312s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 312s Selecting previously unselected package libfontconfig1:arm64. 312s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 312s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 312s Selecting previously unselected package fontconfig. 312s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 312s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 312s Selecting previously unselected package fonts-glyphicons-halflings. 312s Preparing to unpack .../005-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 312s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 312s Selecting previously unselected package libblas3:arm64. 312s Preparing to unpack .../006-libblas3_3.12.0-4_arm64.deb ... 312s Unpacking libblas3:arm64 (3.12.0-4) ... 312s Selecting previously unselected package libpixman-1-0:arm64. 312s Preparing to unpack .../007-libpixman-1-0_0.44.0-3_arm64.deb ... 312s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 312s Selecting previously unselected package libxcb-render0:arm64. 312s Preparing to unpack .../008-libxcb-render0_1.17.0-2_arm64.deb ... 312s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 313s Selecting previously unselected package libxcb-shm0:arm64. 313s Preparing to unpack .../009-libxcb-shm0_1.17.0-2_arm64.deb ... 313s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 313s Selecting previously unselected package libxrender1:arm64. 313s Preparing to unpack .../010-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 313s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 313s Selecting previously unselected package libcairo2:arm64. 313s Preparing to unpack .../011-libcairo2_1.18.2-2_arm64.deb ... 313s Unpacking libcairo2:arm64 (1.18.2-2) ... 313s Selecting previously unselected package libdatrie1:arm64. 313s Preparing to unpack .../012-libdatrie1_0.2.13-3build1_arm64.deb ... 313s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 313s Selecting previously unselected package libdeflate0:arm64. 313s Preparing to unpack .../013-libdeflate0_1.23-1_arm64.deb ... 313s Unpacking libdeflate0:arm64 (1.23-1) ... 313s Selecting previously unselected package libgfortran5:arm64. 313s Preparing to unpack .../014-libgfortran5_14.2.0-13ubuntu1_arm64.deb ... 313s Unpacking libgfortran5:arm64 (14.2.0-13ubuntu1) ... 313s Selecting previously unselected package libgomp1:arm64. 313s Preparing to unpack .../015-libgomp1_14.2.0-13ubuntu1_arm64.deb ... 313s Unpacking libgomp1:arm64 (14.2.0-13ubuntu1) ... 313s Selecting previously unselected package libgraphite2-3:arm64. 313s Preparing to unpack .../016-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 313s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 313s Selecting previously unselected package libharfbuzz0b:arm64. 313s Preparing to unpack .../017-libharfbuzz0b_10.2.0-1_arm64.deb ... 313s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 313s Selecting previously unselected package x11-common. 313s Preparing to unpack .../018-x11-common_1%3a7.7+23ubuntu3_all.deb ... 313s Unpacking x11-common (1:7.7+23ubuntu3) ... 313s Selecting previously unselected package libice6:arm64. 313s Preparing to unpack .../019-libice6_2%3a1.1.1-1_arm64.deb ... 313s Unpacking libice6:arm64 (2:1.1.1-1) ... 313s Selecting previously unselected package libjpeg-turbo8:arm64. 313s Preparing to unpack .../020-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 313s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 313s Selecting previously unselected package libjpeg8:arm64. 313s Preparing to unpack .../021-libjpeg8_8c-2ubuntu11_arm64.deb ... 313s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 313s Selecting previously unselected package libjs-bootstrap. 313s Preparing to unpack .../022-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 313s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 313s Selecting previously unselected package liblapack3:arm64. 313s Preparing to unpack .../023-liblapack3_3.12.0-4_arm64.deb ... 313s Unpacking liblapack3:arm64 (3.12.0-4) ... 313s Selecting previously unselected package liblerc4:arm64. 313s Preparing to unpack .../024-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 313s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 313s Selecting previously unselected package libthai-data. 313s Preparing to unpack .../025-libthai-data_0.1.29-2build1_all.deb ... 313s Unpacking libthai-data (0.1.29-2build1) ... 313s Selecting previously unselected package libthai0:arm64. 313s Preparing to unpack .../026-libthai0_0.1.29-2build1_arm64.deb ... 313s Unpacking libthai0:arm64 (0.1.29-2build1) ... 313s Selecting previously unselected package libpango-1.0-0:arm64. 313s Preparing to unpack .../027-libpango-1.0-0_1.56.1-1_arm64.deb ... 313s Unpacking libpango-1.0-0:arm64 (1.56.1-1) ... 313s Selecting previously unselected package libpangoft2-1.0-0:arm64. 313s Preparing to unpack .../028-libpangoft2-1.0-0_1.56.1-1_arm64.deb ... 313s Unpacking libpangoft2-1.0-0:arm64 (1.56.1-1) ... 313s Selecting previously unselected package libpangocairo-1.0-0:arm64. 313s Preparing to unpack .../029-libpangocairo-1.0-0_1.56.1-1_arm64.deb ... 313s Unpacking libpangocairo-1.0-0:arm64 (1.56.1-1) ... 313s Selecting previously unselected package libpaper2:arm64. 313s Preparing to unpack .../030-libpaper2_2.2.5-0.3_arm64.deb ... 313s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 313s Selecting previously unselected package libpaper-utils. 313s Preparing to unpack .../031-libpaper-utils_2.2.5-0.3_arm64.deb ... 313s Unpacking libpaper-utils (2.2.5-0.3) ... 313s Selecting previously unselected package libsharpyuv0:arm64. 314s Preparing to unpack .../032-libsharpyuv0_1.5.0-0.1_arm64.deb ... 314s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 314s Selecting previously unselected package libsm6:arm64. 314s Preparing to unpack .../033-libsm6_2%3a1.2.4-1_arm64.deb ... 314s Unpacking libsm6:arm64 (2:1.2.4-1) ... 314s Selecting previously unselected package libtcl8.6:arm64. 314s Preparing to unpack .../034-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 314s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 314s Selecting previously unselected package libjbig0:arm64. 314s Preparing to unpack .../035-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 314s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 314s Selecting previously unselected package libwebp7:arm64. 314s Preparing to unpack .../036-libwebp7_1.5.0-0.1_arm64.deb ... 314s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 314s Selecting previously unselected package libtiff6:arm64. 314s Preparing to unpack .../037-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 314s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 314s Selecting previously unselected package libxft2:arm64. 314s Preparing to unpack .../038-libxft2_2.3.6-1build1_arm64.deb ... 314s Unpacking libxft2:arm64 (2.3.6-1build1) ... 314s Selecting previously unselected package libxss1:arm64. 314s Preparing to unpack .../039-libxss1_1%3a1.2.3-1build3_arm64.deb ... 314s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 314s Selecting previously unselected package libtk8.6:arm64. 314s Preparing to unpack .../040-libtk8.6_8.6.16-1_arm64.deb ... 314s Unpacking libtk8.6:arm64 (8.6.16-1) ... 314s Selecting previously unselected package libxt6t64:arm64. 314s Preparing to unpack .../041-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 314s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 314s Selecting previously unselected package zip. 314s Preparing to unpack .../042-zip_3.0-14ubuntu2_arm64.deb ... 314s Unpacking zip (3.0-14ubuntu2) ... 314s Selecting previously unselected package unzip. 314s Preparing to unpack .../043-unzip_6.0-28ubuntu6_arm64.deb ... 314s Unpacking unzip (6.0-28ubuntu6) ... 314s Selecting previously unselected package xdg-utils. 314s Preparing to unpack .../044-xdg-utils_1.2.1-0ubuntu1_all.deb ... 314s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 314s Selecting previously unselected package r-base-core. 314s Preparing to unpack .../045-r-base-core_4.4.2-1build1_arm64.deb ... 314s Unpacking r-base-core (4.4.2-1build1) ... 314s Selecting previously unselected package r-cran-littler. 314s Preparing to unpack .../046-r-cran-littler_0.3.20-2_arm64.deb ... 314s Unpacking r-cran-littler (0.3.20-2) ... 314s Selecting previously unselected package littler. 315s Preparing to unpack .../047-littler_0.3.20-2_all.deb ... 315s Unpacking littler (0.3.20-2) ... 315s Selecting previously unselected package node-html5shiv. 315s Preparing to unpack .../048-node-html5shiv_3.7.3+dfsg-5_all.deb ... 315s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 315s Selecting previously unselected package r-cran-sys. 315s Preparing to unpack .../049-r-cran-sys_3.4.3-1_arm64.deb ... 315s Unpacking r-cran-sys (3.4.3-1) ... 315s Selecting previously unselected package r-cran-askpass. 315s Preparing to unpack .../050-r-cran-askpass_1.2.1-1_arm64.deb ... 315s Unpacking r-cran-askpass (1.2.1-1) ... 315s Selecting previously unselected package r-cran-brio. 315s Preparing to unpack .../051-r-cran-brio_1.1.5-1_arm64.deb ... 315s Unpacking r-cran-brio (1.1.5-1) ... 315s Selecting previously unselected package r-cran-ps. 315s Preparing to unpack .../052-r-cran-ps_1.8.1-1_arm64.deb ... 315s Unpacking r-cran-ps (1.8.1-1) ... 315s Selecting previously unselected package r-cran-r6. 315s Preparing to unpack .../053-r-cran-r6_2.5.1-1_all.deb ... 315s Unpacking r-cran-r6 (2.5.1-1) ... 315s Selecting previously unselected package r-cran-processx. 315s Preparing to unpack .../054-r-cran-processx_3.8.5-1_arm64.deb ... 315s Unpacking r-cran-processx (3.8.5-1) ... 315s Selecting previously unselected package r-cran-callr. 315s Preparing to unpack .../055-r-cran-callr_3.7.6-1_all.deb ... 315s Unpacking r-cran-callr (3.7.6-1) ... 315s Selecting previously unselected package r-cran-cli. 315s Preparing to unpack .../056-r-cran-cli_3.6.3-1_arm64.deb ... 315s Unpacking r-cran-cli (3.6.3-1) ... 315s Selecting previously unselected package r-cran-codetools. 315s Preparing to unpack .../057-r-cran-codetools_0.2-20-1_all.deb ... 315s Unpacking r-cran-codetools (0.2-20-1) ... 315s Selecting previously unselected package r-cran-digest. 315s Preparing to unpack .../058-r-cran-digest_0.6.37-1_arm64.deb ... 315s Unpacking r-cran-digest (0.6.37-1) ... 315s Selecting previously unselected package r-cran-jsonlite. 315s Preparing to unpack .../059-r-cran-jsonlite_1.8.9+dfsg-1_arm64.deb ... 315s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 315s Selecting previously unselected package r-cran-lazyeval. 315s Preparing to unpack .../060-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 315s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 315s Selecting previously unselected package r-cran-rex. 315s Preparing to unpack .../061-r-cran-rex_1.2.1-1_all.deb ... 315s Unpacking r-cran-rex (1.2.1-1) ... 315s Selecting previously unselected package r-cran-curl. 315s Preparing to unpack .../062-r-cran-curl_6.1.0+dfsg-1_arm64.deb ... 315s Unpacking r-cran-curl (6.1.0+dfsg-1) ... 315s Selecting previously unselected package r-cran-mime. 315s Preparing to unpack .../063-r-cran-mime_0.12-2_arm64.deb ... 315s Unpacking r-cran-mime (0.12-2) ... 315s Selecting previously unselected package r-cran-openssl. 315s Preparing to unpack .../064-r-cran-openssl_2.2.0+dfsg-1_arm64.deb ... 315s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 315s Selecting previously unselected package r-cran-httr. 315s Preparing to unpack .../065-r-cran-httr_1.4.7+dfsg-1_all.deb ... 315s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 315s Selecting previously unselected package r-cran-crayon. 315s Preparing to unpack .../066-r-cran-crayon_1.5.3-1_all.deb ... 315s Unpacking r-cran-crayon (1.5.3-1) ... 315s Selecting previously unselected package r-cran-withr. 316s Preparing to unpack .../067-r-cran-withr_3.0.2+dfsg-1_all.deb ... 316s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 316s Selecting previously unselected package r-cran-yaml. 316s Preparing to unpack .../068-r-cran-yaml_2.3.10-1_arm64.deb ... 316s Unpacking r-cran-yaml (2.3.10-1) ... 316s Selecting previously unselected package r-cran-covr. 316s Preparing to unpack .../069-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 316s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 316s Selecting previously unselected package r-cran-desc. 316s Preparing to unpack .../070-r-cran-desc_1.4.3-1_all.deb ... 316s Unpacking r-cran-desc (1.4.3-1) ... 316s Selecting previously unselected package r-cran-diffobj. 316s Preparing to unpack .../071-r-cran-diffobj_0.3.5-1_arm64.deb ... 316s Unpacking r-cran-diffobj (0.3.5-1) ... 316s Selecting previously unselected package r-cran-iterators. 316s Preparing to unpack .../072-r-cran-iterators_1.0.14-1_all.deb ... 316s Unpacking r-cran-iterators (1.0.14-1) ... 316s Selecting previously unselected package r-cran-foreach. 316s Preparing to unpack .../073-r-cran-foreach_1.5.2-1_all.deb ... 316s Unpacking r-cran-foreach (1.5.2-1) ... 316s Selecting previously unselected package r-cran-doparallel. 316s Preparing to unpack .../074-r-cran-doparallel_1.0.17-1_all.deb ... 316s Unpacking r-cran-doparallel (1.0.17-1) ... 316s Selecting previously unselected package r-cran-evaluate. 316s Preparing to unpack .../075-r-cran-evaluate_1.0.3-1_all.deb ... 316s Unpacking r-cran-evaluate (1.0.3-1) ... 316s Selecting previously unselected package r-cran-lattice. 316s Preparing to unpack .../076-r-cran-lattice_0.22-6-1_arm64.deb ... 316s Unpacking r-cran-lattice (0.22-6-1) ... 316s Selecting previously unselected package r-cran-matrix. 316s Preparing to unpack .../077-r-cran-matrix_1.7-2-1_arm64.deb ... 316s Unpacking r-cran-matrix (1.7-2-1) ... 316s Selecting previously unselected package r-cran-expm. 316s Preparing to unpack .../078-r-cran-expm_1.0-0-1_arm64.deb ... 316s Unpacking r-cran-expm (1.0-0-1) ... 316s Selecting previously unselected package r-cran-fansi. 316s Preparing to unpack .../079-r-cran-fansi_1.0.5-1_arm64.deb ... 316s Unpacking r-cran-fansi (1.0.5-1) ... 316s Selecting previously unselected package r-cran-fs. 316s Preparing to unpack .../080-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 316s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 316s Selecting previously unselected package r-cran-generics. 316s Preparing to unpack .../081-r-cran-generics_0.1.3-1_all.deb ... 316s Unpacking r-cran-generics (0.1.3-1) ... 316s Selecting previously unselected package r-cran-glue. 316s Preparing to unpack .../082-r-cran-glue_1.8.0-1_arm64.deb ... 316s Unpacking r-cran-glue (1.8.0-1) ... 316s Selecting previously unselected package r-cran-rlang. 316s Preparing to unpack .../083-r-cran-rlang_1.1.5-1_arm64.deb ... 316s Unpacking r-cran-rlang (1.1.5-1) ... 316s Selecting previously unselected package r-cran-lifecycle. 316s Preparing to unpack .../084-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 316s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 316s Selecting previously unselected package r-cran-magrittr. 316s Preparing to unpack .../085-r-cran-magrittr_2.0.3-1_arm64.deb ... 316s Unpacking r-cran-magrittr (2.0.3-1) ... 316s Selecting previously unselected package r-cran-pkgkitten. 316s Preparing to unpack .../086-r-cran-pkgkitten_0.2.4-1_all.deb ... 316s Unpacking r-cran-pkgkitten (0.2.4-1) ... 317s Selecting previously unselected package r-cran-rcpp. 317s Preparing to unpack .../087-r-cran-rcpp_1.0.14-1_arm64.deb ... 317s Unpacking r-cran-rcpp (1.0.14-1) ... 317s Selecting previously unselected package r-cran-minqa. 317s Preparing to unpack .../088-r-cran-minqa_1.2.8-1_arm64.deb ... 317s Unpacking r-cran-minqa (1.2.8-1) ... 317s Selecting previously unselected package r-cran-survival. 317s Preparing to unpack .../089-r-cran-survival_3.8-3-1_arm64.deb ... 317s Unpacking r-cran-survival (3.8-3-1) ... 317s Selecting previously unselected package r-cran-mvtnorm. 317s Preparing to unpack .../090-r-cran-mvtnorm_1.3-3-1_arm64.deb ... 317s Unpacking r-cran-mvtnorm (1.3-3-1) ... 317s Selecting previously unselected package r-cran-utf8. 317s Preparing to unpack .../091-r-cran-utf8_1.2.4-1_arm64.deb ... 317s Unpacking r-cran-utf8 (1.2.4-1) ... 317s Selecting previously unselected package r-cran-vctrs. 317s Preparing to unpack .../092-r-cran-vctrs_0.6.5-1_arm64.deb ... 317s Unpacking r-cran-vctrs (0.6.5-1) ... 317s Selecting previously unselected package r-cran-pillar. 317s Preparing to unpack .../093-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 317s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 317s Selecting previously unselected package r-cran-pkgconfig. 317s Preparing to unpack .../094-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 317s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 317s Selecting previously unselected package r-cran-tibble. 317s Preparing to unpack .../095-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 317s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 317s Selecting previously unselected package r-cran-msm. 317s Preparing to unpack .../096-r-cran-msm_1.8-1_arm64.deb ... 317s Unpacking r-cran-msm (1.8-1) ... 317s Selecting previously unselected package r-cran-numderiv. 317s Preparing to unpack .../097-r-cran-numderiv_2016.8-1.1-3_all.deb ... 317s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 317s Selecting previously unselected package r-cran-pkgbuild. 317s Preparing to unpack .../098-r-cran-pkgbuild_1.4.6-1_all.deb ... 317s Unpacking r-cran-pkgbuild (1.4.6-1) ... 317s Selecting previously unselected package r-cran-rprojroot. 317s Preparing to unpack .../099-r-cran-rprojroot_2.0.4-2_all.deb ... 317s Unpacking r-cran-rprojroot (2.0.4-2) ... 317s Selecting previously unselected package r-cran-pkgload. 317s Preparing to unpack .../100-r-cran-pkgload_1.4.0-1_all.deb ... 317s Unpacking r-cran-pkgload (1.4.0-1) ... 317s Selecting previously unselected package r-cran-praise. 317s Preparing to unpack .../101-r-cran-praise_1.0.0-4build1_all.deb ... 317s Unpacking r-cran-praise (1.0.0-4build1) ... 317s Selecting previously unselected package r-cran-waldo. 317s Preparing to unpack .../102-r-cran-waldo_0.6.1-1_all.deb ... 317s Unpacking r-cran-waldo (0.6.1-1) ... 317s Selecting previously unselected package r-cran-testthat. 317s Preparing to unpack .../103-r-cran-testthat_3.2.3-1_arm64.deb ... 317s Unpacking r-cran-testthat (3.2.3-1) ... 318s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 318s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 318s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 318s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 318s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 318s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 318s Setting up libxcb-render0:arm64 (1.17.0-2) ... 318s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 318s Setting up unzip (6.0-28ubuntu6) ... 318s Setting up x11-common (1:7.7+23ubuntu3) ... 318s Setting up node-html5shiv (3.7.3+dfsg-5) ... 318s Setting up libdeflate0:arm64 (1.23-1) ... 318s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 318s Setting up libgomp1:arm64 (14.2.0-13ubuntu1) ... 318s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 318s Setting up zip (3.0-14ubuntu2) ... 318s Setting up libblas3:arm64 (3.12.0-4) ... 318s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 318s Setting up fonts-dejavu-mono (2.37-8) ... 318s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ... 318s Setting up fonts-dejavu-core (2.37-8) ... 318s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 318s Setting up libgfortran5:arm64 (14.2.0-13ubuntu1) ... 318s Setting up libwebp7:arm64 (1.5.0-0.1) ... 318s Setting up libharfbuzz0b:arm64 (10.2.0-1) ... 318s Setting up libthai-data (0.1.29-2build1) ... 318s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 318s Setting up libpaper2:arm64 (2.2.5-0.3) ... 318s Setting up xdg-utils (1.2.1-0ubuntu1) ... 318s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 318s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 318s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 318s Setting up libice6:arm64 (2:1.1.1-1) ... 318s Setting up liblapack3:arm64 (3.12.0-4) ... 318s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 318s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 318s Setting up libpaper-utils (2.2.5-0.3) ... 318s Setting up libthai0:arm64 (0.1.29-2build1) ... 318s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 318s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 318s Setting up libsm6:arm64 (2:1.2.4-1) ... 318s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 320s Regenerating fonts cache... done. 320s Setting up libxft2:arm64 (2.3.6-1build1) ... 320s Setting up libtk8.6:arm64 (8.6.16-1) ... 320s Setting up libpango-1.0-0:arm64 (1.56.1-1) ... 320s Setting up libcairo2:arm64 (1.18.2-2) ... 320s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 320s Setting up libpangoft2-1.0-0:arm64 (1.56.1-1) ... 320s Setting up libpangocairo-1.0-0:arm64 (1.56.1-1) ... 320s Setting up r-base-core (4.4.2-1build1) ... 320s Creating config file /etc/R/Renviron with new version 321s Setting up r-cran-crayon (1.5.3-1) ... 321s Setting up r-cran-lattice (0.22-6-1) ... 321s Setting up r-cran-ps (1.8.1-1) ... 321s Setting up r-cran-lazyeval (0.2.2-1build1) ... 321s Setting up r-cran-r6 (2.5.1-1) ... 321s Setting up r-cran-pkgkitten (0.2.4-1) ... 321s Setting up r-cran-numderiv (2016.8-1.1-3) ... 321s Setting up r-cran-magrittr (2.0.3-1) ... 321s Setting up r-cran-littler (0.3.20-2) ... 321s Setting up r-cran-fs (1.6.5+dfsg-1) ... 321s Setting up r-cran-rcpp (1.0.14-1) ... 321s Setting up r-cran-curl (6.1.0+dfsg-1) ... 321s Setting up r-cran-codetools (0.2-20-1) ... 321s Setting up r-cran-brio (1.1.5-1) ... 321s Setting up r-cran-diffobj (0.3.5-1) ... 321s Setting up r-cran-rlang (1.1.5-1) ... 321s Setting up littler (0.3.20-2) ... 321s Setting up r-cran-sys (3.4.3-1) ... 321s Setting up r-cran-withr (3.0.2+dfsg-1) ... 321s Setting up r-cran-processx (3.8.5-1) ... 321s Setting up r-cran-mime (0.12-2) ... 321s Setting up r-cran-praise (1.0.0-4build1) ... 321s Setting up r-cran-generics (0.1.3-1) ... 321s Setting up r-cran-iterators (1.0.14-1) ... 321s Setting up r-cran-digest (0.6.37-1) ... 321s Setting up r-cran-yaml (2.3.10-1) ... 321s Setting up r-cran-evaluate (1.0.3-1) ... 321s Setting up r-cran-foreach (1.5.2-1) ... 321s Setting up r-cran-fansi (1.0.5-1) ... 321s Setting up r-cran-glue (1.8.0-1) ... 321s Setting up r-cran-cli (3.6.3-1) ... 321s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 321s Setting up r-cran-rprojroot (2.0.4-2) ... 321s Setting up r-cran-askpass (1.2.1-1) ... 321s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ... 321s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 321s Setting up r-cran-utf8 (1.2.4-1) ... 321s Setting up r-cran-rex (1.2.1-1) ... 321s Setting up 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(7.1.1-1) ... 323s autopkgtest [19:10:34]: test run-unit-test: [----------------------- 324s 324s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 324s Copyright (C) 2024 The R Foundation for Statistical Computing 324s Platform: aarch64-unknown-linux-gnu 324s 324s R is free software and comes with ABSOLUTELY NO WARRANTY. 324s You are welcome to redistribute it under certain conditions. 324s Type 'license()' or 'licence()' for distribution details. 324s 324s R is a collaborative project with many contributors. 324s Type 'contributors()' for more information and 324s 'citation()' on how to cite R or R packages in publications. 324s 324s Type 'demo()' for some demos, 'help()' for on-line help, or 324s 'help.start()' for an HTML browser interface to help. 324s Type 'q()' to quit R. 324s 324s > library(testthat) 324s > Loading required package: msm 324s test_check("msm") 328s Error in stat(res) : Error 328s Error in solve.default(0.5 * hess) : 328s system is computationally singular: reciprocal condition number = 9.93401e-17 329s Error in stat(res) : Error 338s 338s Call: 338s msm(formula = fev ~ days, subject = ptnum, data = fev[1:500, ], qmatrix = three.q, hmodel = hmodel1, hcovariates = list(~acute, ~acute, NULL), hcovinits = list(-8, -8, NULL), hconstraint = list(acute = c(1, 1)), death = 3, center = FALSE) 338s 338s Maximum likelihood estimates 338s Baselines are with covariates set to 0 338s 338s Transition intensities 338s Baseline 338s State 1 - State 1 -6.381e-04 (-1.276e-03,-3.192e-04) 338s State 1 - State 2 6.373e-04 ( 3.183e-04, 1.276e-03) 338s State 1 - State 3 8.440e-07 ( 3.375e-21, 2.111e+08) 338s State 2 - State 2 -8.299e-04 (-1.749e-03,-3.938e-04) 338s State 2 - State 3 8.299e-04 ( 3.938e-04, 1.749e-03) 338s 338s Hidden Markov model, 3 states 338s State 1 - normal distribution 338s Parameters: 338s Estimate LCL UCL 338s mean 106.234293 103.83878 108.629802 338s sd 17.066749 15.54712 18.734914 338s acute -6.993605 -10.10295 -3.884258 338s 338s State 2 - normal distribution 338s Parameters: 338s Estimate LCL UCL 338s mean 63.790749 61.40091 66.180592 338s sd 14.166004 12.98525 15.454123 338s acute -6.993605 -10.10295 -3.884258 338s 338s State 3 - identity distribution 338s Parameters: 338s Estimate LCL UCL 338s which 999 NA NA 338s 338s 338s -2 * log-likelihood: 4269.772 339s Hidden Markov model binomial distribution 339s 339s Parameters: size = 40, prob = 0.2 339s Multivariate hidden Markov model with 2 outcomes: 339s Hidden Markov model binomial distribution 339s 339s Parameters: size = 40, prob = 0.3 339s Hidden Markov model binomial distribution 339s 339s Parameters: size = 40, prob = 0.3 339s 339s Call: 339s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = oneway4.q, ematrix = ematrix, deathexact = 4, fixedpars = TRUE) 339s 339s 339s -2 * log-likelihood: 4296.916 341s 341s Call: 341s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = oneway4.q, ematrix = ematrix, initprobs = c(0.8, 0.1, 0.1, 0), est.initprobs = TRUE, deathexact = 4, fixedpars = 1:9, method = "BFGS", control = list(fnscale = 4000, maxit = 10000)) 341s 341s Maximum likelihood estimates 341s 341s Transition intensities 341s Baseline 341s Well - Well -0.1651 341s Well - Mild 0.1480 341s Well - Death 0.0171 341s Mild - Mild -0.2830 341s Mild - Severe 0.2020 341s Mild - Death 0.0810 341s Severe - Severe -0.1260 (-0.126,-0.126) 341s Severe - Death 0.1260 341s 341s Misclassification probabilities 341s Baseline 341s Obs Well | Well 0.9 (0.9,0.9) 341s Obs Mild | Well 0.1 341s Obs Well | Mild 0.1 341s Obs Mild | Mild 0.8 341s Obs Severe | Mild 0.1 341s Obs Mild | Severe 0.1 341s Obs Severe | Severe 0.9 (0.9,0.9) 341s 341s Initial state occupancy probabilities 341s Estimate LCL UCL 341s State 1 0.9995418040 8.909606e-01 0.99998008 341s State 2 0.0001849772 4.097837e-07 0.07836076 341s State 3 0.0002732188 2.500337e-06 0.03221896 341s State 4 0.0000000000 0.000000e+00 0.00000000 341s 341s -2 * log-likelihood: 4297.466 341s 341s Observed numbers of individuals occupying states at each time 341s 341s State 1 State 2 State 3 State 4 Total 341s 0 622 0 0 0 622 341s 1.94602739726027 537 4 5 54 600 341s 3.89205479452054 356 35 24 87 502 341s 5.83808219178081 208 41 28 127 404 341s 7.78410958904108 122 44 27 158 351 341s 9.73013698630135 71 25 22 187 305 341s 11.6761643835616 31 11 13 218 273 341s 13.6221917808219 12 6 5 236 259 341s 15.5682191780822 5 1 3 244 253 341s 17.5142465753424 1 0 2 249 252 341s 19.4602739726027 0 0 0 251 251 341s 341s Expected numbers of individuals occupying states at each time 341s 341s Well Mild Severe Death Total 341s 0 454.060000 105.74000 62.20000 0.00000 622 341s 1.94602739726027 325.710210 142.31588 85.87563 46.09828 600 341s 3.89205479452054 201.519656 121.76444 94.55263 84.16327 502 341s 5.83808219178081 119.419915 89.03744 88.74180 106.80084 404 341s 7.78410958904108 76.147715 66.14910 82.14786 126.55532 351 341s 9.73013698630135 48.439143 47.43163 71.31882 137.81040 305 341s 11.6761643835616 31.676873 34.25326 60.87352 146.19635 273 341s 13.6221917808219 21.922294 25.83213 53.18927 158.05631 259 341s 15.5682191780822 15.602058 19.85855 46.59544 170.94396 253 341s 17.5142465753424 11.311456 15.46051 40.76362 184.46441 252 341s 19.4602739726027 8.194417 11.98037 35.07316 195.75205 251 341s 341s Observed prevalences of states (percentages of population at risk) 341s 341s State 1 State 2 State 3 State 4 341s 0 100.0000000 0.0000000 0.0000000 0.00000 341s 1.94602739726027 89.5000000 0.6666667 0.8333333 9.00000 341s 3.89205479452054 70.9163347 6.9721116 4.7808765 17.33068 341s 5.83808219178081 51.4851485 10.1485149 6.9306931 31.43564 341s 7.78410958904108 34.7578348 12.5356125 7.6923077 45.01425 341s 9.73013698630135 23.2786885 8.1967213 7.2131148 61.31148 341s 11.6761643835616 11.3553114 4.0293040 4.7619048 79.85348 341s 13.6221917808219 4.6332046 2.3166023 1.9305019 91.11969 341s 15.5682191780822 1.9762846 0.3952569 1.1857708 96.44269 341s 17.5142465753424 0.3968254 0.0000000 0.7936508 98.80952 341s 19.4602739726027 0.0000000 0.0000000 0.0000000 100.00000 341s 341s Expected prevalences of states (percentages of population at risk) 341s 341s Well Mild Severe Death 341s 0 73.000000 17.000000 10.00000 0.000000 341s 1.94602739726027 54.285035 23.719313 14.31260 7.683047 341s 3.89205479452054 40.143358 24.255864 18.83519 16.765592 341s 5.83808219178081 29.559385 22.038971 21.96579 26.435852 341s 7.78410958904108 21.694506 18.845898 23.40395 36.055648 341s 9.73013698630135 15.881686 15.551355 23.38322 45.183739 341s 11.6761643835616 11.603250 12.546980 22.29799 53.551777 341s 13.6221917808219 8.464206 9.973795 20.53640 61.025602 341s 15.5682191780822 6.166821 7.849229 18.41717 67.566782 341s 17.5142465753424 4.488673 6.135124 16.17604 73.200163 341s 19.4602739726027 3.264708 4.773057 13.97337 77.988863 342s 342s Call: 342s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = twoway4.q, deathexact = TRUE, fixedpars = TRUE, method = "BFGS", control = list(trace = 5, REPORT = 1)) 342s 342s 342s -2 * log-likelihood: 4908.817 342s 342s Call: 342s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = twoway4.q, deathexact = TRUE, fixedpars = TRUE, method = "BFGS", control = list(trace = 5, REPORT = 1)) 342s 342s -2 * log-likelihood: 4908.817 343s 343s Call: 343s msm(formula = state ~ months, subject = ptnum, data = psor, qmatrix = psor.q, covariates = ~ollwsdrt + hieffusn, constraint = list(hieffusn = c(1, 1, 1), ollwsdrt = c(1, 1, 2)), control = list(fnscale = 1)) 343s 343s Maximum likelihood estimates 343s Baselines are with covariates set to their means 343s 343s Transition intensities with hazard ratios for each covariate 343s Baseline ollwsdrt 343s State 1 - State 1 -0.09594 (-0.1216,-0.0757) 343s State 1 - State 2 0.09594 ( 0.0757, 0.1216) 0.5652 (0.3853,0.829) 343s State 2 - State 2 -0.16431 (-0.2076,-0.1300) 343s State 2 - State 3 0.16431 ( 0.1300, 0.2076) 0.5652 (0.3853,0.829) 343s State 3 - State 3 -0.25438 (-0.3396,-0.1905) 343s State 3 - State 4 0.25438 ( 0.1905, 0.3396) 1.6408 (0.8154,3.302) 343s hieffusn 343s State 1 - State 1 343s State 1 - State 2 1.646 (1.148,2.359) 343s State 2 - State 2 343s State 2 - State 3 1.646 (1.148,2.359) 343s State 3 - State 3 343s State 3 - State 4 1.646 (1.148,2.359) 343s 343s -2 * log-likelihood: 1114.899 343s 343s Call: 343s msm(formula = state ~ months, subject = ptnum, data = psor, qmatrix = psor.q, covariates = ~ollwsdrt + hieffusn, constraint = list(hieffusn = c(1, 1, 1), ollwsdrt = c(1, 1, 2)), control = list(fnscale = 1)) 343s 343s Maximum likelihood estimates: 343s Transition intensity matrix with covariates set to their means 343s 343s State 1 State 2 343s State 1 -0.09594 (-0.1216,-0.0757) 0.09594 ( 0.0757, 0.1216) 343s State 2 0 -0.16431 (-0.2076,-0.1300) 343s State 3 0 0 343s State 4 0 0 343s State 3 State 4 343s State 1 0 0 343s State 2 0.16431 ( 0.1300, 0.2076) 0 343s State 3 -0.25438 (-0.3396,-0.1905) 0.25438 ( 0.1905, 0.3396) 343s State 4 0 0 343s 343s Log-linear effects of ollwsdrt 343s 343s State 1 State 2 State 3 343s State 1 0 -0.5706 (-0.9536,-0.1876) 0 343s State 2 0 0 -0.5706 (-0.9536,-0.1876) 343s State 3 0 0 0 343s State 4 0 0 0 343s State 4 343s State 1 0 343s State 2 0 343s State 3 0.4952 (-0.2041, 1.1944) 343s State 4 0 343s 343s Log-linear effects of hieffusn 343s 343s State 1 State 2 State 3 343s State 1 0 0.4983 (0.1383,0.8584) 0 343s State 2 0 0 0.4983 (0.1383,0.8584) 343s State 3 0 0 0 343s State 4 0 0 0 343s State 4 343s State 1 0 343s State 2 0 343s State 3 0.4983 (0.1383,0.8584) 343s State 4 0 343s 343s -2 * log-likelihood: 1114.899 359s State 1 State 2 359s State 1 -0.09594 (-0.1216,-0.0757) 0.09594 ( 0.0757, 0.1216) 359s State 2 0 -0.16431 (-0.2076,-0.1300) 359s State 3 0 0 359s State 4 0 0 359s State 3 State 4 359s State 1 0 0 359s State 2 0.16431 ( 0.1300, 0.2076) 0 359s State 3 -0.25438 (-0.3396,-0.1905) 0.25438 ( 0.1905, 0.3396) 359s State 4 0 0 361s Imputing sampling times after deaths... 361s Calculating replicates of test statistics for imputations... 375s [ FAIL 0 | WARN 0 | SKIP 7 | PASS 597 ] 375s 375s ══ Skipped tests (7) ═══════════════════════════════════════════════════════════ 376s • On CRAN (7): 'test_draic.r:25:3', 'test_models_hmm.r:186:3', 376s 'test_models.r:780:3', 'test_pearson.R:24:3', 'test_phase.R:9:3', 376s 'test_simul.R:2:3', 'test_weights.R:42:3' 376s 376s [ FAIL 0 | WARN 0 | SKIP 7 | PASS 597 ] 376s > 376s autopkgtest [19:11:27]: test run-unit-test: -----------------------] 377s autopkgtest [19:11:28]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 377s run-unit-test PASS 377s autopkgtest [19:11:28]: test pkg-r-autopkgtest: preparing testbed 378s Reading package lists... 378s Building dependency tree... 378s Reading state information... 379s Starting pkgProblemResolver with broken count: 0 379s Starting 2 pkgProblemResolver with broken count: 0 379s Done 379s The following NEW packages will be installed: 379s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 379s dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 379s gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 379s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 379s libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 379s libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 379s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 379s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 379s libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev 379s libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev 379s zlib1g-dev 380s 0 upgraded, 54 newly installed, 0 to remove and 0 not upgraded. 380s Need to get 92.4 MB of archives. 380s After this operation, 333 MB of additional disk space will be used. 380s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 380s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 380s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [10.6 MB] 382s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-13ubuntu1 [1030 B] 382s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B] 382s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB] 382s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-13ubuntu1 [49.6 kB] 382s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-13ubuntu1 [27.8 kB] 382s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-13ubuntu1 [2893 kB] 382s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-13ubuntu1 [1283 kB] 382s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-13ubuntu1 [2686 kB] 382s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-13ubuntu1 [1152 kB] 382s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-13ubuntu1 [1598 kB] 382s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-13ubuntu1 [2596 kB] 382s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [20.9 MB] 383s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-13ubuntu1 [523 kB] 383s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B] 383s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B] 383s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-13ubuntu1 [2502 kB] 383s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [12.1 MB] 384s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-13ubuntu1 [21.1 kB] 384s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B] 384s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B] 384s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 384s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 384s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-13ubuntu1 [498 kB] 384s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [11.4 MB] 384s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-13ubuntu1 [13.2 kB] 384s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1022 B] 384s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.1.0-2ubuntu1 [1162 B] 384s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 384s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.0-4 [120 kB] 384s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 384s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 384s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 384s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 384s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 384s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 384s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.0-4 [4419 kB] 384s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5-2 [385 kB] 384s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB] 384s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu3 [187 kB] 384s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu3 [6704 B] 384s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.42-4ubuntu3 [694 kB] 385s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 385s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 385s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.44-3 [270 kB] 385s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 385s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.3-1 [180 kB] 385s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 385s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 385s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 385s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.2-1build1 [4342 B] 385s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 385s Fetched 92.4 MB in 5s (17.9 MB/s) 385s Selecting previously unselected package libisl23:arm64. 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 124879 files and directories currently installed.) 385s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ... 385s Unpacking libisl23:arm64 (0.27-1) ... 385s Selecting previously unselected package libmpc3:arm64. 385s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ... 385s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 385s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 385s Preparing to unpack .../02-cpp-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 385s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 385s Selecting previously unselected package cpp-14. 385s Preparing to unpack .../03-cpp-14_14.2.0-13ubuntu1_arm64.deb ... 385s Unpacking cpp-14 (14.2.0-13ubuntu1) ... 385s Selecting previously unselected package cpp-aarch64-linux-gnu. 385s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 385s Unpacking cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 385s Selecting previously unselected package cpp. 385s Preparing to unpack .../05-cpp_4%3a14.1.0-2ubuntu1_arm64.deb ... 385s Unpacking cpp (4:14.1.0-2ubuntu1) ... 385s Selecting previously unselected package libcc1-0:arm64. 385s Preparing to unpack .../06-libcc1-0_14.2.0-13ubuntu1_arm64.deb ... 385s Unpacking libcc1-0:arm64 (14.2.0-13ubuntu1) ... 385s Selecting previously unselected package libitm1:arm64. 385s Preparing to unpack .../07-libitm1_14.2.0-13ubuntu1_arm64.deb ... 385s Unpacking libitm1:arm64 (14.2.0-13ubuntu1) ... 385s Selecting previously unselected package libasan8:arm64. 386s Preparing to unpack .../08-libasan8_14.2.0-13ubuntu1_arm64.deb ... 386s Unpacking libasan8:arm64 (14.2.0-13ubuntu1) ... 386s Selecting previously unselected package liblsan0:arm64. 386s Preparing to unpack .../09-liblsan0_14.2.0-13ubuntu1_arm64.deb ... 386s Unpacking liblsan0:arm64 (14.2.0-13ubuntu1) ... 386s Selecting previously unselected package libtsan2:arm64. 386s Preparing to unpack .../10-libtsan2_14.2.0-13ubuntu1_arm64.deb ... 386s Unpacking libtsan2:arm64 (14.2.0-13ubuntu1) ... 386s Selecting previously unselected package libubsan1:arm64. 386s Preparing to unpack .../11-libubsan1_14.2.0-13ubuntu1_arm64.deb ... 386s Unpacking libubsan1:arm64 (14.2.0-13ubuntu1) ... 386s Selecting previously unselected package libhwasan0:arm64. 386s Preparing to unpack .../12-libhwasan0_14.2.0-13ubuntu1_arm64.deb ... 386s Unpacking libhwasan0:arm64 (14.2.0-13ubuntu1) ... 386s Selecting previously unselected package libgcc-14-dev:arm64. 386s Preparing to unpack .../13-libgcc-14-dev_14.2.0-13ubuntu1_arm64.deb ... 386s Unpacking libgcc-14-dev:arm64 (14.2.0-13ubuntu1) ... 386s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 386s Preparing to unpack .../14-gcc-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 386s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 386s Selecting previously unselected package gcc-14. 386s Preparing to unpack .../15-gcc-14_14.2.0-13ubuntu1_arm64.deb ... 386s Unpacking gcc-14 (14.2.0-13ubuntu1) ... 386s Selecting previously unselected package gcc-aarch64-linux-gnu. 386s Preparing to unpack .../16-gcc-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 386s Unpacking gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 386s Selecting previously unselected package gcc. 386s Preparing to unpack .../17-gcc_4%3a14.1.0-2ubuntu1_arm64.deb ... 386s Unpacking gcc (4:14.1.0-2ubuntu1) ... 386s Selecting previously unselected package libstdc++-14-dev:arm64. 387s Preparing to unpack .../18-libstdc++-14-dev_14.2.0-13ubuntu1_arm64.deb ... 387s Unpacking libstdc++-14-dev:arm64 (14.2.0-13ubuntu1) ... 387s Selecting previously unselected package g++-14-aarch64-linux-gnu. 387s Preparing to unpack .../19-g++-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 387s Unpacking g++-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 387s Selecting previously unselected package g++-14. 387s Preparing to unpack .../20-g++-14_14.2.0-13ubuntu1_arm64.deb ... 387s Unpacking g++-14 (14.2.0-13ubuntu1) ... 387s Selecting previously unselected package g++-aarch64-linux-gnu. 387s Preparing to unpack .../21-g++-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 387s Unpacking g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 387s Selecting previously unselected package g++. 387s Preparing to unpack .../22-g++_4%3a14.1.0-2ubuntu1_arm64.deb ... 387s Unpacking g++ (4:14.1.0-2ubuntu1) ... 387s Selecting previously unselected package build-essential. 387s Preparing to unpack .../23-build-essential_12.10ubuntu1_arm64.deb ... 387s Unpacking build-essential (12.10ubuntu1) ... 387s Selecting previously unselected package dctrl-tools. 387s Preparing to unpack .../24-dctrl-tools_2.24-3build3_arm64.deb ... 387s Unpacking dctrl-tools (2.24-3build3) ... 387s Selecting previously unselected package libgfortran-14-dev:arm64. 387s Preparing to unpack .../25-libgfortran-14-dev_14.2.0-13ubuntu1_arm64.deb ... 387s Unpacking libgfortran-14-dev:arm64 (14.2.0-13ubuntu1) ... 387s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 387s Preparing to unpack .../26-gfortran-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 387s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 387s Selecting previously unselected package gfortran-14. 387s Preparing to unpack .../27-gfortran-14_14.2.0-13ubuntu1_arm64.deb ... 387s Unpacking gfortran-14 (14.2.0-13ubuntu1) ... 387s Selecting previously unselected package gfortran-aarch64-linux-gnu. 388s Preparing to unpack .../28-gfortran-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 388s Unpacking gfortran-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 388s Selecting previously unselected package gfortran. 388s Preparing to unpack .../29-gfortran_4%3a14.1.0-2ubuntu1_arm64.deb ... 388s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 388s Selecting previously unselected package icu-devtools. 388s Preparing to unpack .../30-icu-devtools_76.1-1ubuntu2_arm64.deb ... 388s Unpacking icu-devtools (76.1-1ubuntu2) ... 388s Selecting previously unselected package libblas-dev:arm64. 388s Preparing to unpack .../31-libblas-dev_3.12.0-4_arm64.deb ... 388s Unpacking libblas-dev:arm64 (3.12.0-4) ... 388s Selecting previously unselected package libbz2-dev:arm64. 388s Preparing to unpack .../32-libbz2-dev_1.0.8-6_arm64.deb ... 388s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 388s Selecting previously unselected package libdeflate-dev:arm64. 388s Preparing to unpack .../33-libdeflate-dev_1.23-1_arm64.deb ... 388s Unpacking libdeflate-dev:arm64 (1.23-1) ... 388s Selecting previously unselected package libicu-dev:arm64. 388s Preparing to unpack .../34-libicu-dev_76.1-1ubuntu2_arm64.deb ... 388s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 388s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 388s Preparing to unpack .../35-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 388s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 388s Selecting previously unselected package libjpeg8-dev:arm64. 388s Preparing to unpack .../36-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 388s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 388s Selecting previously unselected package libjpeg-dev:arm64. 388s Preparing to unpack .../37-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 388s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 388s Selecting previously unselected package liblapack-dev:arm64. 388s Preparing to unpack .../38-liblapack-dev_3.12.0-4_arm64.deb ... 388s Unpacking liblapack-dev:arm64 (3.12.0-4) ... 388s Selecting previously unselected package libncurses-dev:arm64. 388s Preparing to unpack .../39-libncurses-dev_6.5-2_arm64.deb ... 388s Unpacking libncurses-dev:arm64 (6.5-2) ... 388s Selecting previously unselected package libpcre2-16-0:arm64. 388s Preparing to unpack .../40-libpcre2-16-0_10.42-4ubuntu3_arm64.deb ... 388s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu3) ... 388s Selecting previously unselected package libpcre2-32-0:arm64. 388s Preparing to unpack .../41-libpcre2-32-0_10.42-4ubuntu3_arm64.deb ... 388s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu3) ... 388s Selecting previously unselected package libpcre2-posix3:arm64. 388s Preparing to unpack .../42-libpcre2-posix3_10.42-4ubuntu3_arm64.deb ... 388s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu3) ... 388s Selecting previously unselected package libpcre2-dev:arm64. 388s Preparing to unpack .../43-libpcre2-dev_10.42-4ubuntu3_arm64.deb ... 388s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu3) ... 389s Selecting previously unselected package libpkgconf3:arm64. 389s Preparing to unpack .../44-libpkgconf3_1.8.1-4_arm64.deb ... 389s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 389s Selecting previously unselected package zlib1g-dev:arm64. 389s Preparing to unpack .../45-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 389s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 389s Selecting previously unselected package libpng-dev:arm64. 389s Preparing to unpack .../46-libpng-dev_1.6.44-3_arm64.deb ... 389s Unpacking libpng-dev:arm64 (1.6.44-3) ... 389s Selecting previously unselected package libreadline-dev:arm64. 389s Preparing to unpack .../47-libreadline-dev_8.2-6_arm64.deb ... 389s Unpacking libreadline-dev:arm64 (8.2-6) ... 389s Selecting previously unselected package liblzma-dev:arm64. 389s Preparing to unpack .../48-liblzma-dev_5.6.3-1_arm64.deb ... 389s Unpacking liblzma-dev:arm64 (5.6.3-1) ... 389s Selecting previously unselected package pkgconf-bin. 389s Preparing to unpack .../49-pkgconf-bin_1.8.1-4_arm64.deb ... 389s Unpacking pkgconf-bin (1.8.1-4) ... 389s Selecting previously unselected package pkgconf:arm64. 389s Preparing to unpack .../50-pkgconf_1.8.1-4_arm64.deb ... 389s Unpacking pkgconf:arm64 (1.8.1-4) ... 389s Selecting previously unselected package libtirpc-dev:arm64. 389s Preparing to unpack .../51-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 389s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 389s Selecting previously unselected package r-base-dev. 389s Preparing to unpack .../52-r-base-dev_4.4.2-1build1_all.deb ... 389s Unpacking r-base-dev (4.4.2-1build1) ... 389s Selecting previously unselected package pkg-r-autopkgtest. 389s Preparing to unpack .../53-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 389s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 389s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 389s Setting up libncurses-dev:arm64 (6.5-2) ... 389s Setting up libreadline-dev:arm64 (8.2-6) ... 389s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu3) ... 389s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu3) ... 389s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 389s Setting up libpkgconf3:arm64 (1.8.1-4) ... 389s Setting up libmpc3:arm64 (1.3.1-1build2) ... 389s Setting up icu-devtools (76.1-1ubuntu2) ... 389s Setting up pkgconf-bin (1.8.1-4) ... 389s Setting up liblzma-dev:arm64 (5.6.3-1) ... 389s Setting up libubsan1:arm64 (14.2.0-13ubuntu1) ... 389s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 389s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu3) ... 389s Setting up libhwasan0:arm64 (14.2.0-13ubuntu1) ... 389s Setting up libasan8:arm64 (14.2.0-13ubuntu1) ... 389s Setting up libtsan2:arm64 (14.2.0-13ubuntu1) ... 389s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 389s Setting up libisl23:arm64 (0.27-1) ... 389s Setting up libdeflate-dev:arm64 (1.23-1) ... 389s Setting up libicu-dev:arm64 (76.1-1ubuntu2) ... 389s Setting up libcc1-0:arm64 (14.2.0-13ubuntu1) ... 389s Setting up liblsan0:arm64 (14.2.0-13ubuntu1) ... 389s Setting up libblas-dev:arm64 (3.12.0-4) ... 389s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 389s Setting up dctrl-tools (2.24-3build3) ... 389s Setting up libitm1:arm64 (14.2.0-13ubuntu1) ... 389s Setting up libbz2-dev:arm64 (1.0.8-6) ... 389s Setting up libpcre2-dev:arm64 (10.42-4ubuntu3) ... 389s Setting up libpng-dev:arm64 (1.6.44-3) ... 389s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 389s Setting up pkgconf:arm64 (1.8.1-4) ... 389s Setting up liblapack-dev:arm64 (3.12.0-4) ... 389s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 389s Setting up cpp-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 389s Setting up libgcc-14-dev:arm64 (14.2.0-13ubuntu1) ... 389s Setting up libstdc++-14-dev:arm64 (14.2.0-13ubuntu1) ... 389s Setting up libgfortran-14-dev:arm64 (14.2.0-13ubuntu1) ... 389s Setting up cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 389s Setting up cpp-14 (14.2.0-13ubuntu1) ... 389s Setting up cpp (4:14.1.0-2ubuntu1) ... 389s Setting up gcc-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 389s Setting up gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 389s Setting up g++-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 389s Setting up gcc-14 (14.2.0-13ubuntu1) ... 389s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 389s Setting up g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 389s Setting up gfortran-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 389s Setting up g++-14 (14.2.0-13ubuntu1) ... 389s Setting up gfortran-14 (14.2.0-13ubuntu1) ... 389s Setting up gcc (4:14.1.0-2ubuntu1) ... 389s Setting up g++ (4:14.1.0-2ubuntu1) ... 389s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 389s Setting up build-essential (12.10ubuntu1) ... 389s Setting up gfortran (4:14.1.0-2ubuntu1) ... 389s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 389s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 389s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 389s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 389s Setting up r-base-dev (4.4.2-1build1) ... 389s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 389s Processing triggers for libc-bin (2.40-4ubuntu1) ... 389s Processing triggers for man-db (2.13.0-1) ... 390s Processing triggers for install-info (7.1.1-1) ... 391s autopkgtest [19:11:42]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 391s autopkgtest [19:11:42]: test pkg-r-autopkgtest: [----------------------- 392s Test: Try to load the R library msm 392s 392s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 392s Copyright (C) 2024 The R Foundation for Statistical Computing 392s Platform: aarch64-unknown-linux-gnu 392s 392s R is free software and comes with ABSOLUTELY NO WARRANTY. 392s You are welcome to redistribute it under certain conditions. 392s Type 'license()' or 'licence()' for distribution details. 392s 392s R is a collaborative project with many contributors. 392s Type 'contributors()' for more information and 392s 'citation()' on how to cite R or R packages in publications. 392s 392s Type 'demo()' for some demos, 'help()' for on-line help, or 392s 'help.start()' for an HTML browser interface to help. 392s Type 'q()' to quit R. 392s 392s > library('msm') 393s > 393s > 393s Other tests are currently unsupported! 393s They will be progressively added. 394s autopkgtest [19:11:45]: test pkg-r-autopkgtest: -----------------------] 394s pkg-r-autopkgtest PASS 394s autopkgtest [19:11:45]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 395s autopkgtest [19:11:46]: @@@@@@@@@@@@@@@@@@@@ summary 395s run-unit-test PASS 395s pkg-r-autopkgtest PASS 399s nova [W] Using flock in prodstack6-arm64 399s flock: timeout while waiting to get lock 399s Creating nova instance adt-plucky-arm64-r-cran-msm-20250203-182335-juju-7f2275-prod-proposed-migration-environment-20-019af954-81bb-4fb4-9a3a-d46c9ade91b4 from image adt/ubuntu-plucky-arm64-server-20250203.img (UUID fb7ca42f-38bc-45ee-b928-9b9fb089de0d)... 399s nova [W] Timed out waiting for dd00433b-431c-4f56-bb09-c2c3d8d47bfb to get deleted.