0s autopkgtest [15:40:30]: starting date and time: 2025-03-15 15:40:30+0000
  0s autopkgtest [15:40:30]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [15:40:30]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.hh_ogs1v/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-mda --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-11.secgroup --name adt-plucky-arm64-r-cran-mda-20250315-154030-juju-7f2275-prod-proposed-migration-environment-2-49fefe40-2fa5-43a9-a4be-5eb8df2487e9 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
145s autopkgtest [15:42:55]: testbed dpkg architecture: arm64
146s autopkgtest [15:42:56]: testbed apt version: 2.9.33
146s autopkgtest [15:42:56]: @@@@@@@@@@@@@@@@@@@@ test bed setup
146s autopkgtest [15:42:56]: testbed release detected to be: None
147s autopkgtest [15:42:57]: updating testbed package index (apt update)
148s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
148s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
148s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
148s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
148s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
149s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
149s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
149s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB]
150s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1856 B]
150s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B]
150s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [324 kB]
150s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [14.7 kB]
150s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B]
150s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [268 B]
151s Fetched 1078 kB in 3s (353 kB/s)
152s Reading package lists...
153s Reading package lists...
153s Building dependency tree...
153s Reading state information...
154s Calculating upgrade...
154s Calculating upgrade...
154s The following packages will be upgraded:
154s   pinentry-curses python3-jinja2 strace
155s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
155s Need to get 647 kB of archives.
155s After this operation, 11.3 kB of additional disk space will be used.
155s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB]
156s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-2ubuntu3 [39.2 kB]
156s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
157s Fetched 647 kB in 1s (456 kB/s)
157s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 117701 files and directories currently installed.)
157s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ...
157s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
157s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_arm64.deb ...
157s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
157s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
157s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
157s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
157s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
158s Setting up strace (6.13+ds-1ubuntu1) ...
158s Processing triggers for man-db (2.13.0-1) ...
158s Reading package lists...
159s Building dependency tree...
159s Reading state information...
159s Solving dependencies...
160s The following packages will be REMOVED:
160s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
160s   libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
160s   linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic*
160s   linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic*
160s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded.
160s After this operation, 267 MB disk space will be freed.
160s (Reading database ... 
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(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 117701 files and directories currently installed.)
160s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
160s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
160s Removing libpython3.12t64:arm64 (3.12.9-1) ...
160s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ...
160s Removing libnsl2:arm64 (1.3.0-3build3) ...
160s Removing libpython3.12-minimal:arm64 (3.12.9-1) ...
161s Removing libunwind8:arm64 (1.6.2-3.1) ...
161s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
161s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
163s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ...
163s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic
163s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic
163s /etc/kernel/postrm.d/initramfs-tools:
163s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic
163s /etc/kernel/postrm.d/zz-flash-kernel:
163s flash-kernel: Kernel 6.11.0-8-generic has been removed.
163s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required.
164s /etc/kernel/postrm.d/zz-update-grub:
164s Sourcing file `/etc/default/grub'
164s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
164s Generating grub configuration file ...
164s Found linux image: /boot/vmlinuz-6.14.0-10-generic
164s Found initrd image: /boot/initrd.img-6.14.0-10-generic
165s Warning: os-prober will not be executed to detect other bootable partitions.
165s Systems on them will not be added to the GRUB boot configuration.
165s Check GRUB_DISABLE_OS_PROBER documentation entry.
165s Adding boot menu entry for UEFI Firmware Settings ...
165s done
165s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
165s Processing triggers for libc-bin (2.41-1ubuntu1) ...
165s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81650 files and directories currently installed.)
165s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ...
165s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ...
165s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
166s autopkgtest [15:43:16]: upgrading testbed (apt dist-upgrade and autopurge)
166s Reading package lists...
166s Building dependency tree...
166s Reading state information...
168s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
168s Starting 2 pkgProblemResolver with broken count: 0
168s Done
170s Entering ResolveByKeep
170s 
171s Calculating upgrade...
172s The following packages will be upgraded:
172s   libc-bin libc-dev-bin libc6 libc6-dev locales
172s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
172s Need to get 9530 kB of archives.
172s After this operation, 0 B of additional disk space will be used.
172s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB]
175s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB]
175s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB]
179s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB]
180s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB]
187s Preconfiguring packages ...
187s Fetched 9530 kB in 15s (655 kB/s)
187s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
187s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ...
187s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
188s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ...
188s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
188s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ...
188s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
188s Setting up libc6:arm64 (2.41-1ubuntu2) ...
188s (Reading database ... 
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
188s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ...
188s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
189s Setting up libc-bin (2.41-1ubuntu2) ...
189s (Reading database ... 
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(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
189s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
189s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
189s Setting up locales (2.41-1ubuntu2) ...
190s Generating locales (this might take a while)...
193s   en_US.UTF-8... done
193s Generation complete.
193s Setting up libc-dev-bin (2.41-1ubuntu2) ...
193s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ...
193s Processing triggers for man-db (2.13.0-1) ...
194s Processing triggers for systemd (257.3-1ubuntu3) ...
195s Reading package lists...
196s Building dependency tree...
196s Reading state information...
196s Starting pkgProblemResolver with broken count: 0
197s Starting 2 pkgProblemResolver with broken count: 0
197s Done
198s Solving dependencies...
199s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
199s autopkgtest [15:43:49]: rebooting testbed after setup commands that affected boot
222s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
229s autopkgtest [15:44:19]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025
232s autopkgtest [15:44:22]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-mda
236s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-mda 0.5-5-1 (dsc) [2082 B]
236s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-mda 0.5-5-1 (tar) [783 kB]
236s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-mda 0.5-5-1 (diff) [2500 B]
236s gpgv: Signature made Mon Jan 27 06:26:51 2025 UTC
236s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
236s gpgv:                issuer "plessy@debian.org"
236s gpgv: Can't check signature: No public key
236s dpkg-source: warning: cannot verify inline signature for ./r-cran-mda_0.5-5-1.dsc: no acceptable signature found
236s autopkgtest [15:44:26]: testing package r-cran-mda version 0.5-5-1
237s autopkgtest [15:44:27]: build not needed
239s autopkgtest [15:44:29]: test run-unit-test: preparing testbed
239s Reading package lists...
240s Building dependency tree...
240s Reading state information...
240s Starting pkgProblemResolver with broken count: 0
240s Starting 2 pkgProblemResolver with broken count: 0
240s Done
242s The following NEW packages will be installed:
242s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
242s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1
242s   libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8
242s   liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
242s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
242s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
242s   libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-brio r-cran-callr
242s   r-cran-class r-cran-cli r-cran-crayon r-cran-desc r-cran-diffobj
242s   r-cran-digest r-cran-earth r-cran-evaluate r-cran-formula r-cran-fs
242s   r-cran-glue r-cran-jsonlite r-cran-lifecycle r-cran-magrittr r-cran-mass
242s   r-cran-mda r-cran-pkgbuild r-cran-pkgload r-cran-plotmo r-cran-plotrix
242s   r-cran-praise r-cran-processx r-cran-ps r-cran-r6 r-cran-rlang
242s   r-cran-rprojroot r-cran-testthat r-cran-waldo r-cran-withr unzip x11-common
242s   xdg-utils zip
242s 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded.
242s Need to get 55.2 MB of archives.
242s After this operation, 108 MB of additional disk space will be used.
242s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
243s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
244s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB]
244s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB]
244s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB]
244s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB]
244s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
245s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
245s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
245s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
245s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
245s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
245s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB]
245s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB]
246s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB]
246s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
246s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB]
247s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
247s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
247s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
247s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
247s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB]
249s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
249s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
250s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
250s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB]
250s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB]
250s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB]
250s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB]
250s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB]
250s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB]
250s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
250s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB]
251s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
251s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB]
252s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
252s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
252s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
252s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB]
253s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
253s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB]
253s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
253s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
254s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB]
286s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB]
286s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB]
286s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB]
286s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB]
287s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB]
287s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-64-1 [1110 kB]
288s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB]
289s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB]
290s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB]
290s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB]
290s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB]
292s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB]
292s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formula all 1.2-5-1 [158 kB]
292s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plotrix all 3.8-4-1 [1120 kB]
293s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plotmo all 3.6.4-1 [1482 kB]
295s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-earth arm64 5.3.4-1 [1982 kB]
297s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB]
297s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB]
297s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB]
298s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB]
298s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB]
300s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
300s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
300s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mda arm64 0.5-5-1 [729 kB]
301s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB]
301s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB]
301s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
301s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB]
302s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB]
302s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-2 [150 kB]
302s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB]
304s Preconfiguring packages ...
304s Fetched 55.2 MB in 1min 2s (890 kB/s)
304s Selecting previously unselected package fonts-dejavu-mono.
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305s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ...
305s Unpacking fonts-dejavu-mono (2.37-8) ...
305s Selecting previously unselected package fonts-dejavu-core.
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305s Unpacking fonts-dejavu-core (2.37-8) ...
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305s Selecting previously unselected package libfontconfig1:arm64.
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306s Selecting previously unselected package libblas3:arm64.
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306s Selecting previously unselected package libice6:arm64.
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307s Selecting previously unselected package libpangocairo-1.0-0:arm64.
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309s Selecting previously unselected package r-cran-plotrix.
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309s Selecting previously unselected package r-cran-plotmo.
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309s Selecting previously unselected package r-cran-earth.
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310s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
310s Selecting previously unselected package r-cran-rlang.
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310s Unpacking r-cran-rlang (1.1.5-1) ...
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310s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
310s Selecting previously unselected package r-cran-magrittr.
310s Preparing to unpack .../66-r-cran-magrittr_2.0.3-1_arm64.deb ...
310s Unpacking r-cran-magrittr (2.0.3-1) ...
310s Selecting previously unselected package r-cran-mda.
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310s Unpacking r-cran-mda (0.5-5-1) ...
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310s Preparing to unpack .../68-r-cran-pkgbuild_1.4.6-1_all.deb ...
310s Unpacking r-cran-pkgbuild (1.4.6-1) ...
310s Selecting previously unselected package r-cran-rprojroot.
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310s Unpacking r-cran-rprojroot (2.0.4-2) ...
310s Selecting previously unselected package r-cran-withr.
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310s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
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310s Unpacking r-cran-pkgload (1.4.0-1) ...
310s Selecting previously unselected package r-cran-praise.
310s Preparing to unpack .../72-r-cran-praise_1.0.0-4build1_all.deb ...
310s Unpacking r-cran-praise (1.0.0-4build1) ...
310s Selecting previously unselected package r-cran-waldo.
310s Preparing to unpack .../73-r-cran-waldo_0.6.1-2_all.deb ...
310s Unpacking r-cran-waldo (0.6.1-2) ...
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310s Unpacking r-cran-testthat (3.2.3-1) ...
310s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
310s Setting up libpixman-1-0:arm64 (0.44.0-3) ...
310s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ...
310s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
310s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ...
310s Setting up libdatrie1:arm64 (0.2.13-3build1) ...
310s Setting up libxcb-render0:arm64 (1.17.0-2) ...
310s Setting up unzip (6.0-28ubuntu6) ...
310s Setting up x11-common (1:7.7+23ubuntu3) ...
311s Setting up libdeflate0:arm64 (1.23-1) ...
311s Setting up libxcb-shm0:arm64 (1.17.0-2) ...
311s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ...
311s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ...
311s Setting up zip (3.0-14ubuntu2) ...
311s Setting up libblas3:arm64 (3.12.1-2) ...
311s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
311s Setting up fonts-dejavu-mono (2.37-8) ...
311s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ...
311s Setting up fonts-dejavu-core (2.37-8) ...
311s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
311s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ...
311s Setting up libwebp7:arm64 (1.5.0-0.1) ...
311s Setting up libharfbuzz0b:arm64 (10.2.0-1) ...
311s Setting up libthai-data (0.1.29-2build1) ...
311s Setting up libxss1:arm64 (1:1.2.3-1build3) ...
311s Setting up libpaper2:arm64 (2.2.5-0.3) ...
311s Setting up xdg-utils (1.2.1-2ubuntu1) ...
311s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
311s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
311s Setting up libice6:arm64 (2:1.1.1-1) ...
311s Setting up liblapack3:arm64 (3.12.1-2) ...
311s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
311s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
312s Setting up libpaper-utils (2.2.5-0.3) ...
312s Setting up libthai0:arm64 (0.1.29-2build1) ...
312s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
312s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ...
312s Setting up libsm6:arm64 (2:1.2.4-1) ...
312s Setting up fontconfig (2.15.0-2ubuntu1) ...
314s Regenerating fonts cache... done.
314s Setting up libxft2:arm64 (2.3.6-1build1) ...
314s Setting up libtk8.6:arm64 (8.6.16-1) ...
314s Setting up libpango-1.0-0:arm64 (1.56.2-1) ...
314s Setting up libcairo2:arm64 (1.18.2-2) ...
314s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ...
314s Setting up libpangoft2-1.0-0:arm64 (1.56.2-1) ...
314s Setting up libpangocairo-1.0-0:arm64 (1.56.2-1) ...
314s Setting up r-base-core (4.4.3-1) ...
314s Creating config file /etc/R/Renviron with new version
314s Setting up r-cran-crayon (1.5.3-1) ...
314s Setting up r-cran-ps (1.9.0-1) ...
314s Setting up r-cran-formula (1.2-5-1) ...
314s Setting up r-cran-r6 (2.6.1-1) ...
314s Setting up r-cran-magrittr (2.0.3-1) ...
314s Setting up r-cran-fs (1.6.5+dfsg-1) ...
314s Setting up r-cran-brio (1.1.5-1) ...
314s Setting up r-cran-diffobj (0.3.5-1) ...
314s Setting up r-cran-rlang (1.1.5-1) ...
314s Setting up r-cran-withr (3.0.2+dfsg-1) ...
314s Setting up r-cran-processx (3.8.6-1) ...
314s Setting up r-cran-praise (1.0.0-4build1) ...
314s Setting up r-cran-digest (0.6.37-1) ...
314s Setting up r-cran-evaluate (1.0.3-1) ...
314s Setting up r-cran-mass (7.3-64-1) ...
314s Setting up r-cran-glue (1.8.0-1) ...
314s Setting up r-cran-cli (3.6.4-1) ...
314s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
314s Setting up r-cran-rprojroot (2.0.4-2) ...
314s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
314s Setting up r-cran-plotrix (3.8-4-1) ...
314s Setting up r-cran-waldo (0.6.1-2) ...
314s Setting up r-cran-plotmo (3.6.4-1) ...
314s Setting up r-cran-class (7.3-23-1) ...
314s Setting up r-cran-callr (3.7.6-1) ...
314s Setting up r-cran-desc (1.4.3-1) ...
314s Setting up r-cran-mda (0.5-5-1) ...
314s Setting up r-cran-earth (5.3.4-1) ...
314s Setting up r-cran-pkgbuild (1.4.6-1) ...
314s Setting up r-cran-pkgload (1.4.0-1) ...
314s Setting up r-cran-testthat (3.2.3-1) ...
314s Processing triggers for libc-bin (2.41-1ubuntu2) ...
314s Processing triggers for man-db (2.13.0-1) ...
315s Processing triggers for install-info (7.1.1-1) ...
317s autopkgtest [15:45:47]: test run-unit-test: [-----------------------
317s BEGIN TEST testthat.R
317s 
317s R version 4.4.3 (2025-02-28) -- "Trophy Case"
317s Copyright (C) 2025 The R Foundation for Statistical Computing
317s Platform: aarch64-unknown-linux-gnu
317s 
317s R is free software and comes with ABSOLUTELY NO WARRANTY.
317s You are welcome to redistribute it under certain conditions.
317s Type 'license()' or 'licence()' for distribution details.
317s 
317s R is a collaborative project with many contributors.
317s Type 'contributors()' for more information and
317s 'citation()' on how to cite R or R packages in publications.
317s 
317s Type 'demo()' for some demos, 'help()' for on-line help, or
317s 'help.start()' for an HTML browser interface to help.
317s Type 'q()' to quit R.
317s 
317s > library(testthat)
318s > library(mda)
318s Loading required package: class
318s Loaded mda 0.5-5
318s 
318s > 
318s > test_check("mda")
318s                 [,1]
318s Intercept -0.7540653
318s x1        -0.0998547
318s x2         1.1010589
318s                 [,1]       [,2]
318s Intercept  0.5443088  1.7225482
318s x1        -1.2475196 -0.7814268
318s x2         0.5748352 -1.4674081
318s   [1] 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0
318s  [38] 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0
318s  [75] 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 1 0 0 1 0 0 0 1 1 1 1
318s [112] 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1
318s [149] 1 1 1 1 1 0 1 1 0 0 1 1 1 0 1 1 1 0 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
318s [186] 1 1 1 0 1 1 1 1 1 0 1 1 1 1 0
318s Levels: 0 1
318s          true
318s predicted  0  1
318s         0 80 13
318s         1 20 87
318s          true
318s predicted  0  1
318s         0 80 19
318s         1 20 81
318s Testing fda.fit
318s Testing mda.fit
318s Testing fitb
318s Testing fitm
318s Testing fitb.confusion
318s Testing fitm.confusion
318s Testing mda.ppred
318s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
318s > 
318s autopkgtest [15:45:48]: test run-unit-test: -----------------------]
319s run-unit-test        PASS
319s autopkgtest [15:45:49]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
319s autopkgtest [15:45:49]: test pkg-r-autopkgtest: preparing testbed
319s Reading package lists...
320s Building dependency tree...
320s Reading state information...
321s Starting pkgProblemResolver with broken count: 0
321s Starting 2 pkgProblemResolver with broken count: 0
321s Done
322s The following NEW packages will be installed:
322s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
322s   dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
322s   gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14
322s   gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools
322s   libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
322s   libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev
322s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3
322s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
322s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
322s   libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev
322s   zlib1g-dev
322s 0 upgraded, 54 newly installed, 0 to remove and 0 not upgraded.
322s Need to get 92.7 MB of archives.
322s After this operation, 334 MB of additional disk space will be used.
322s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
323s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
323s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB]
336s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B]
336s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B]
336s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB]
336s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB]
337s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB]
337s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB]
340s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB]
341s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB]
344s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB]
346s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB]
348s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB]
350s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB]
375s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB]
375s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B]
375s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B]
376s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB]
379s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB]
392s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB]
392s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B]
392s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B]
392s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
392s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB]
393s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB]
393s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB]
406s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB]
406s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B]
406s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B]
406s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB]
406s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB]
406s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB]
407s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB]
407s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB]
420s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB]
420s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
420s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
420s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB]
426s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB]
427s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB]
427s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB]
427s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B]
427s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB]
428s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB]
428s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
429s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB]
430s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB]
430s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB]
430s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB]
430s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB]
431s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB]
431s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B]
431s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
432s Fetched 92.7 MB in 1min 49s (851 kB/s)
432s Selecting previously unselected package libisl23:arm64.
432s (Reading database ... 
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(Reading database ... 86912 files and directories currently installed.)
432s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ...
432s Unpacking libisl23:arm64 (0.27-1) ...
432s Selecting previously unselected package libmpc3:arm64.
432s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ...
432s Unpacking libmpc3:arm64 (1.3.1-1build2) ...
432s Selecting previously unselected package cpp-14-aarch64-linux-gnu.
432s Preparing to unpack .../02-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
432s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
432s Selecting previously unselected package cpp-14.
432s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_arm64.deb ...
432s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
432s Selecting previously unselected package cpp-aarch64-linux-gnu.
432s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
432s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
432s Selecting previously unselected package cpp.
432s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ...
432s Unpacking cpp (4:14.2.0-1ubuntu1) ...
432s Selecting previously unselected package libcc1-0:arm64.
432s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_arm64.deb ...
432s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ...
432s Selecting previously unselected package libitm1:arm64.
432s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_arm64.deb ...
432s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ...
432s Selecting previously unselected package libasan8:arm64.
433s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_arm64.deb ...
433s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ...
433s Selecting previously unselected package liblsan0:arm64.
433s Preparing to unpack .../09-liblsan0_15-20250222-0ubuntu1_arm64.deb ...
433s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ...
433s Selecting previously unselected package libtsan2:arm64.
433s Preparing to unpack .../10-libtsan2_15-20250222-0ubuntu1_arm64.deb ...
433s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ...
433s Selecting previously unselected package libubsan1:arm64.
433s Preparing to unpack .../11-libubsan1_15-20250222-0ubuntu1_arm64.deb ...
433s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ...
433s Selecting previously unselected package libhwasan0:arm64.
433s Preparing to unpack .../12-libhwasan0_15-20250222-0ubuntu1_arm64.deb ...
433s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ...
433s Selecting previously unselected package libgcc-14-dev:arm64.
433s Preparing to unpack .../13-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ...
433s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ...
433s Selecting previously unselected package gcc-14-aarch64-linux-gnu.
433s Preparing to unpack .../14-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
433s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
434s Selecting previously unselected package gcc-14.
434s Preparing to unpack .../15-gcc-14_14.2.0-17ubuntu3_arm64.deb ...
434s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
434s Selecting previously unselected package gcc-aarch64-linux-gnu.
434s Preparing to unpack .../16-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
434s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
434s Selecting previously unselected package gcc.
434s Preparing to unpack .../17-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ...
434s Unpacking gcc (4:14.2.0-1ubuntu1) ...
434s Selecting previously unselected package libstdc++-14-dev:arm64.
434s Preparing to unpack .../18-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ...
434s Unpacking libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ...
434s Selecting previously unselected package g++-14-aarch64-linux-gnu.
434s Preparing to unpack .../19-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
434s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
435s Selecting previously unselected package g++-14.
435s Preparing to unpack .../20-g++-14_14.2.0-17ubuntu3_arm64.deb ...
435s Unpacking g++-14 (14.2.0-17ubuntu3) ...
435s Selecting previously unselected package g++-aarch64-linux-gnu.
435s Preparing to unpack .../21-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
435s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
435s Selecting previously unselected package g++.
435s Preparing to unpack .../22-g++_4%3a14.2.0-1ubuntu1_arm64.deb ...
435s Unpacking g++ (4:14.2.0-1ubuntu1) ...
435s Selecting previously unselected package build-essential.
435s Preparing to unpack .../23-build-essential_12.10ubuntu1_arm64.deb ...
435s Unpacking build-essential (12.10ubuntu1) ...
435s Selecting previously unselected package dctrl-tools.
435s Preparing to unpack .../24-dctrl-tools_2.24-3build3_arm64.deb ...
435s Unpacking dctrl-tools (2.24-3build3) ...
435s Selecting previously unselected package libgfortran-14-dev:arm64.
435s Preparing to unpack .../25-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ...
435s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ...
435s Selecting previously unselected package gfortran-14-aarch64-linux-gnu.
435s Preparing to unpack .../26-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
435s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
436s Selecting previously unselected package gfortran-14.
436s Preparing to unpack .../27-gfortran-14_14.2.0-17ubuntu3_arm64.deb ...
436s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
436s Selecting previously unselected package gfortran-aarch64-linux-gnu.
436s Preparing to unpack .../28-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
436s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
436s Selecting previously unselected package gfortran.
436s Preparing to unpack .../29-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ...
436s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
436s Selecting previously unselected package icu-devtools.
436s Preparing to unpack .../30-icu-devtools_76.1-1ubuntu2_arm64.deb ...
436s Unpacking icu-devtools (76.1-1ubuntu2) ...
436s Selecting previously unselected package libblas-dev:arm64.
436s Preparing to unpack .../31-libblas-dev_3.12.1-2_arm64.deb ...
436s Unpacking libblas-dev:arm64 (3.12.1-2) ...
436s Selecting previously unselected package libbz2-dev:arm64.
436s Preparing to unpack .../32-libbz2-dev_1.0.8-6_arm64.deb ...
436s Unpacking libbz2-dev:arm64 (1.0.8-6) ...
436s Selecting previously unselected package libdeflate-dev:arm64.
436s Preparing to unpack .../33-libdeflate-dev_1.23-1_arm64.deb ...
436s Unpacking libdeflate-dev:arm64 (1.23-1) ...
436s Selecting previously unselected package libicu-dev:arm64.
436s Preparing to unpack .../34-libicu-dev_76.1-1ubuntu2_arm64.deb ...
436s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ...
436s Selecting previously unselected package libjpeg-turbo8-dev:arm64.
436s Preparing to unpack .../35-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ...
436s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ...
436s Selecting previously unselected package libjpeg8-dev:arm64.
437s Preparing to unpack .../36-libjpeg8-dev_8c-2ubuntu11_arm64.deb ...
437s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ...
437s Selecting previously unselected package libjpeg-dev:arm64.
437s Preparing to unpack .../37-libjpeg-dev_8c-2ubuntu11_arm64.deb ...
437s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ...
437s Selecting previously unselected package liblapack-dev:arm64.
437s Preparing to unpack .../38-liblapack-dev_3.12.1-2_arm64.deb ...
437s Unpacking liblapack-dev:arm64 (3.12.1-2) ...
437s Selecting previously unselected package libncurses-dev:arm64.
437s Preparing to unpack .../39-libncurses-dev_6.5+20250216-2_arm64.deb ...
437s Unpacking libncurses-dev:arm64 (6.5+20250216-2) ...
437s Selecting previously unselected package libpcre2-16-0:arm64.
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439s Processing triggers for install-info (7.1.1-1) ...
441s autopkgtest [15:47:51]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
441s autopkgtest [15:47:51]: test pkg-r-autopkgtest: [-----------------------
441s Test: Try to load the R library mda
441s 
441s R version 4.4.3 (2025-02-28) -- "Trophy Case"
441s Copyright (C) 2025 The R Foundation for Statistical Computing
441s Platform: aarch64-unknown-linux-gnu
441s 
441s R is free software and comes with ABSOLUTELY NO WARRANTY.
441s You are welcome to redistribute it under certain conditions.
441s Type 'license()' or 'licence()' for distribution details.
441s 
441s R is a collaborative project with many contributors.
441s Type 'contributors()' for more information and
441s 'citation()' on how to cite R or R packages in publications.
441s 
441s Type 'demo()' for some demos, 'help()' for on-line help, or
441s 'help.start()' for an HTML browser interface to help.
441s Type 'q()' to quit R.
441s 
441s > library('mda')
441s Loading required package: class
441s Loaded mda 0.5-5
441s 
441s > 
441s > 
441s Other tests are currently unsupported!
441s They will be progressively added.
442s autopkgtest [15:47:52]: test pkg-r-autopkgtest: -----------------------]
442s autopkgtest [15:47:52]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
442s pkg-r-autopkgtest    PASS
443s autopkgtest [15:47:53]: @@@@@@@@@@@@@@@@@@@@ summary
443s run-unit-test        PASS
443s pkg-r-autopkgtest    PASS
461s nova [W] Using flock in prodstack6-arm64
461s Creating nova instance adt-plucky-arm64-r-cran-mda-20250315-154030-juju-7f2275-prod-proposed-migration-environment-2-49fefe40-2fa5-43a9-a4be-5eb8df2487e9 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)...
461s nova [W] Timed out waiting for 19a1d307-1bb2-44cf-b859-178b66016663 to get deleted.