0s autopkgtest [15:39:55]: starting date and time: 2025-03-15 15:39:55+0000
  0s autopkgtest [15:39:55]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [15:39:55]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.hqymqe3w/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-maxstat --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-24.secgroup --name adt-plucky-arm64-r-cran-maxstat-20250315-153955-juju-7f2275-prod-proposed-migration-environment-20-32616d6e-9238-4bd6-a577-c725e400c86d --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
137s autopkgtest [15:42:12]: testbed dpkg architecture: arm64
138s autopkgtest [15:42:13]: testbed apt version: 2.9.33
138s autopkgtest [15:42:13]: @@@@@@@@@@@@@@@@@@@@ test bed setup
138s autopkgtest [15:42:13]: testbed release detected to be: None
139s autopkgtest [15:42:14]: updating testbed package index (apt update)
139s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
140s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
140s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
140s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
140s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
140s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
141s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
141s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB]
141s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1856 B]
141s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B]
141s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [324 kB]
141s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [14.7 kB]
141s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B]
141s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [268 B]
142s Fetched 1078 kB in 2s (492 kB/s)
143s Reading package lists...
144s Reading package lists...
144s Building dependency tree...
144s Reading state information...
145s Calculating upgrade...
146s Calculating upgrade...
147s The following packages will be upgraded:
147s   pinentry-curses python3-jinja2 strace
147s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
147s Need to get 647 kB of archives.
147s After this operation, 11.3 kB of additional disk space will be used.
147s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB]
148s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-2ubuntu3 [39.2 kB]
148s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
148s Fetched 647 kB in 1s (607 kB/s)
149s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 117701 files and directories currently installed.)
149s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ...
149s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
149s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_arm64.deb ...
149s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
149s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
149s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
149s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
149s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
150s Setting up strace (6.13+ds-1ubuntu1) ...
150s Processing triggers for man-db (2.13.0-1) ...
151s Reading package lists...
151s Building dependency tree...
151s Reading state information...
151s Solving dependencies...
152s The following packages will be REMOVED:
152s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
152s   libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
152s   linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic*
152s   linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic*
152s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded.
152s After this operation, 267 MB disk space will be freed.
152s (Reading database ... 
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(Reading database ... 85%
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 117701 files and directories currently installed.)
152s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
152s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
152s Removing libpython3.12t64:arm64 (3.12.9-1) ...
152s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ...
152s Removing libnsl2:arm64 (1.3.0-3build3) ...
152s Removing libpython3.12-minimal:arm64 (3.12.9-1) ...
153s Removing libunwind8:arm64 (1.6.2-3.1) ...
153s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
153s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
155s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ...
155s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic
155s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic
155s /etc/kernel/postrm.d/initramfs-tools:
155s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic
155s /etc/kernel/postrm.d/zz-flash-kernel:
155s flash-kernel: Kernel 6.11.0-8-generic has been removed.
155s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required.
155s /etc/kernel/postrm.d/zz-update-grub:
155s Sourcing file `/etc/default/grub'
155s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
156s Generating grub configuration file ...
156s Found linux image: /boot/vmlinuz-6.14.0-10-generic
156s Found initrd image: /boot/initrd.img-6.14.0-10-generic
156s Warning: os-prober will not be executed to detect other bootable partitions.
156s Systems on them will not be added to the GRUB boot configuration.
156s Check GRUB_DISABLE_OS_PROBER documentation entry.
156s Adding boot menu entry for UEFI Firmware Settings ...
156s done
156s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
156s Processing triggers for libc-bin (2.41-1ubuntu1) ...
157s (Reading database ... 
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(Reading database ... 100%
(Reading database ... 81650 files and directories currently installed.)
157s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ...
157s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ...
157s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
157s autopkgtest [15:42:32]: upgrading testbed (apt dist-upgrade and autopurge)
158s Reading package lists...
158s Building dependency tree...
158s Reading state information...
159s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
159s Starting 2 pkgProblemResolver with broken count: 0
159s Done
160s Entering ResolveByKeep
160s 
160s Calculating upgrade...
160s The following packages will be upgraded:
160s   libc-bin libc-dev-bin libc6 libc6-dev locales
161s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
161s Need to get 9530 kB of archives.
161s After this operation, 0 B of additional disk space will be used.
161s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB]
163s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB]
163s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB]
166s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB]
166s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB]
171s Preconfiguring packages ...
172s Fetched 9530 kB in 11s (907 kB/s)
172s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
172s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ...
172s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
172s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ...
172s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
172s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ...
172s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
172s Setting up libc6:arm64 (2.41-1ubuntu2) ...
173s (Reading database ... 
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(Reading database ... 70%
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(Reading database ... 80%
(Reading database ... 85%
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
173s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ...
173s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
173s Setting up libc-bin (2.41-1ubuntu2) ...
173s (Reading database ... 
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
173s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
173s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
173s Setting up locales (2.41-1ubuntu2) ...
174s Generating locales (this might take a while)...
176s   en_US.UTF-8... done
176s Generation complete.
176s Setting up libc-dev-bin (2.41-1ubuntu2) ...
176s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ...
176s Processing triggers for man-db (2.13.0-1) ...
177s Processing triggers for systemd (257.3-1ubuntu3) ...
177s Reading package lists...
178s Building dependency tree...
178s Reading state information...
178s Starting pkgProblemResolver with broken count: 0
178s Starting 2 pkgProblemResolver with broken count: 0
178s Done
179s Solving dependencies...
179s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
179s autopkgtest [15:42:54]: rebooting testbed after setup commands that affected boot
202s autopkgtest [15:43:17]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025
205s autopkgtest [15:43:20]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-maxstat
207s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-maxstat 0.7-25-2build1 (dsc) [2111 B]
207s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-maxstat 0.7-25-2build1 (tar) [111 kB]
207s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-maxstat 0.7-25-2build1 (diff) [2544 B]
207s gpgv: Signature made Sat May 30 14:17:33 2020 UTC
207s gpgv:                using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2
207s gpgv: Can't check signature: No public key
207s dpkg-source: warning: cannot verify inline signature for ./r-cran-maxstat_0.7-25-2build1.dsc: no acceptable signature found
207s autopkgtest [15:43:22]: testing package r-cran-maxstat version 0.7-25-2build1
208s autopkgtest [15:43:23]: build not needed
211s autopkgtest [15:43:26]: test run-unit-test: preparing testbed
211s Reading package lists...
211s Building dependency tree...
211s Reading state information...
212s Starting pkgProblemResolver with broken count: 0
212s Starting 2 pkgProblemResolver with broken count: 0
212s Done
212s The following NEW packages will be installed:
212s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
212s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1
212s   libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8
212s   liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
212s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
212s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
212s   libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-exactranktests
212s   r-cran-maxstat r-cran-mvtnorm unzip x11-common xdg-utils zip
213s 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded.
213s Need to get 39.6 MB of archives.
213s After this operation, 81.3 MB of additional disk space will be used.
213s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
213s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
214s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB]
214s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB]
214s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB]
215s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB]
215s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
215s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
215s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
215s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
215s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
216s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
216s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB]
216s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB]
216s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB]
217s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
217s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB]
217s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
217s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
217s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
218s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
218s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB]
220s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
220s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
221s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
221s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB]
221s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB]
221s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB]
221s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB]
221s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB]
221s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB]
221s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
221s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB]
222s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
222s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB]
222s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
223s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
223s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
223s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB]
223s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
224s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB]
224s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
224s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
224s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB]
258s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-exactranktests arm64 0.8-35-1 [163 kB]
258s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mvtnorm arm64 1.3-3-1 [921 kB]
260s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-maxstat arm64 0.7-25-2build1 [177 kB]
260s Preconfiguring packages ...
260s Fetched 39.6 MB in 47s (844 kB/s)
260s Selecting previously unselected package fonts-dejavu-mono.
261s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
261s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ...
261s Unpacking fonts-dejavu-mono (2.37-8) ...
261s Selecting previously unselected package fonts-dejavu-core.
261s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ...
261s Unpacking fonts-dejavu-core (2.37-8) ...
261s Selecting previously unselected package fontconfig-config.
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263s Setting up fonts-dejavu-core (2.37-8) ...
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264s Setting up xdg-utils (1.2.1-2ubuntu1) ...
264s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
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264s Setting up liblapack3:arm64 (3.12.1-2) ...
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266s Regenerating fonts cache... done.
266s Setting up libxft2:arm64 (2.3.6-1build1) ...
266s Setting up libtk8.6:arm64 (8.6.16-1) ...
266s Setting up libpango-1.0-0:arm64 (1.56.2-1) ...
266s Setting up libcairo2:arm64 (1.18.2-2) ...
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266s Setting up r-base-core (4.4.3-1) ...
266s Creating config file /etc/R/Renviron with new version
266s Setting up r-cran-exactranktests (0.8-35-1) ...
266s Setting up r-cran-mvtnorm (1.3-3-1) ...
266s Setting up r-cran-maxstat (0.7-25-2build1) ...
266s Processing triggers for man-db (2.13.0-1) ...
268s Processing triggers for install-info (7.1.1-1) ...
268s Processing triggers for libc-bin (2.41-1ubuntu2) ...
269s autopkgtest [15:44:24]: test run-unit-test: [-----------------------
269s BEGIN TEST maxstat-bugs.R
270s 
270s R version 4.4.3 (2025-02-28) -- "Trophy Case"
270s Copyright (C) 2025 The R Foundation for Statistical Computing
270s Platform: aarch64-unknown-linux-gnu
270s 
270s R is free software and comes with ABSOLUTELY NO WARRANTY.
270s You are welcome to redistribute it under certain conditions.
270s Type 'license()' or 'licence()' for distribution details.
270s 
270s R is a collaborative project with many contributors.
270s Type 'contributors()' for more information and
270s 'citation()' on how to cite R or R packages in publications.
270s 
270s Type 'demo()' for some demos, 'help()' for on-line help, or
270s 'help.start()' for an HTML browser interface to help.
270s Type 'q()' to quit R.
270s 
270s > 
270s > library("maxstat")
270s > library("exactRankTests")
270s  Package ‘exactRankTests’ is no longer under development.
270s  Please consider using package ‘coin’ instead.
270s 
270s > set.seed(290875)
270s > 
270s > # by Achim Zeileis, 13.09.2002
270s > y <- c(0.9, 1, 0.8, 0.8, 0.85, 0.3, 0.2, 0.2, 0.1, 0.2, 0.3)
270s > index <- 1:length(y)
270s > mydata <- data.frame(cbind(y, index))
270s > maxstat.test(y ~ index, data=mydata, smethod = "Wilcoxon", pmethod = "HL")
270s 
270s Maximally selected Wilcoxon statistics using HL
270s 
270s data:  y by index
270s M = 2.7767, p-value < 2.2e-16
270s sample estimates:
270s estimated cutpoint 
270s                  5 
270s 
270s > # this one failed: QUANT not known
270s > maxstat.test(y ~ index, data=mydata)
270s 
270s Maximally selected Wilcoxon statistics using none
270s 
270s data:  y by index
270s M = 2.7767, p-value = NA
270s sample estimates:
270s estimated cutpoint 
270s                  5 
270s 
270s > 
270s > # spotted and fixed 16.09.2002
270s > y <- rnorm(20)
270s > x <- factor(c(rep(0,10), rep(1,10)))
270s > mydata <- data.frame(cbind(y,x))
270s > a <- maxstat.test(y ~ x, data=mydata, smethod="Wilcoxon", pmethod="HL")
270s > b <- wilcox.exact(y ~ x, data=mydata)                                  
270s > stopifnot(all.equal(a$p.value, b$p.value))
270s > 
270s > # check new conditional Monte-Carlo p-values
270s > 
270s > set.seed(290875)
270s > a <- maxstat.test(y ~ x, data=mydata, smethod="Wilcoxon", pmethod="condMC", 
270s +              B = 9999)$p.value
270s > a
270s [1] 0.9150915
270s > set.seed(290875)
270s > b <- maxstat.test(y ~ x, data=mydata, smethod="Wilcoxon", pmethod="condMC", 
270s +              B = 9999, alpha = 0.9)$p.value
270s > b
270s [1] 0.9150915
270s > stopifnot(all.equal(a, b))
270s > 
270s > 
270s autopkgtest [15:44:25]: test run-unit-test: -----------------------]
271s run-unit-test        PASS
271s autopkgtest [15:44:26]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
271s autopkgtest [15:44:26]: test pkg-r-autopkgtest: preparing testbed
271s Reading package lists...
272s Building dependency tree...
272s Reading state information...
272s Starting pkgProblemResolver with broken count: 0
272s Starting 2 pkgProblemResolver with broken count: 0
272s Done
273s The following NEW packages will be installed:
273s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
273s   dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
273s   gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14
273s   gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools
273s   libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
273s   libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev
273s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3
273s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
273s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
273s   libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev
273s   r-cran-lattice r-cran-mass r-cran-matrix r-cran-survival r-cran-th.data
273s   zlib1g-dev
273s 0 upgraded, 59 newly installed, 0 to remove and 0 not upgraded.
273s Need to get 116 MB of archives.
273s After this operation, 364 MB of additional disk space will be used.
273s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
274s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
274s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB]
288s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B]
288s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B]
288s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB]
288s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB]
288s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB]
288s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB]
290s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB]
291s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB]
294s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB]
296s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB]
298s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB]
301s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB]
331s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB]
332s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B]
332s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B]
332s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB]
337s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB]
359s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB]
359s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B]
359s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B]
359s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
359s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB]
359s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB]
360s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB]
377s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB]
377s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B]
377s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B]
377s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB]
377s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB]
377s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB]
377s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB]
377s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB]
397s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB]
397s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
397s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
397s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB]
404s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB]
405s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB]
405s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB]
406s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B]
406s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB]
407s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB]
407s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
408s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB]
409s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB]
409s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB]
409s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB]
409s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB]
409s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB]
410s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B]
410s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
410s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB]
412s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-64-1 [1110 kB]
414s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB]
420s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB]
433s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-th.data all 1.1-3-1 [8723 kB]
446s Fetched 116 MB in 2min 53s (672 kB/s)
446s Selecting previously unselected package libisl23:arm64.
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446s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ...
446s Unpacking libisl23:arm64 (0.27-1) ...
446s Selecting previously unselected package libmpc3:arm64.
446s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ...
446s Unpacking libmpc3:arm64 (1.3.1-1build2) ...
446s Selecting previously unselected package cpp-14-aarch64-linux-gnu.
446s Preparing to unpack .../02-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
446s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
447s Selecting previously unselected package cpp-14.
447s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_arm64.deb ...
447s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
447s Selecting previously unselected package cpp-aarch64-linux-gnu.
447s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
447s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
447s Selecting previously unselected package cpp.
447s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ...
447s Unpacking cpp (4:14.2.0-1ubuntu1) ...
447s Selecting previously unselected package libcc1-0:arm64.
447s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_arm64.deb ...
447s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ...
447s Selecting previously unselected package libitm1:arm64.
447s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_arm64.deb ...
447s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ...
447s Selecting previously unselected package libasan8:arm64.
447s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_arm64.deb ...
447s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ...
447s Selecting previously unselected package liblsan0:arm64.
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447s Selecting previously unselected package libtsan2:arm64.
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447s Selecting previously unselected package libubsan1:arm64.
447s Preparing to unpack .../11-libubsan1_15-20250222-0ubuntu1_arm64.deb ...
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447s Selecting previously unselected package libhwasan0:arm64.
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448s Selecting previously unselected package libstdc++-14-dev:arm64.
448s Preparing to unpack .../18-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ...
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448s Selecting previously unselected package g++-14-aarch64-linux-gnu.
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449s Selecting previously unselected package g++-aarch64-linux-gnu.
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449s Selecting previously unselected package dctrl-tools.
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449s Selecting previously unselected package libgfortran-14-dev:arm64.
449s Preparing to unpack .../25-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ...
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449s Selecting previously unselected package gfortran-14-aarch64-linux-gnu.
449s Preparing to unpack .../26-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
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449s Selecting previously unselected package gfortran-14.
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449s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
449s Selecting previously unselected package gfortran-aarch64-linux-gnu.
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449s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
449s Selecting previously unselected package gfortran.
449s Preparing to unpack .../29-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ...
449s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
449s Selecting previously unselected package icu-devtools.
449s Preparing to unpack .../30-icu-devtools_76.1-1ubuntu2_arm64.deb ...
449s Unpacking icu-devtools (76.1-1ubuntu2) ...
450s Selecting previously unselected package libblas-dev:arm64.
450s Preparing to unpack .../31-libblas-dev_3.12.1-2_arm64.deb ...
450s Unpacking libblas-dev:arm64 (3.12.1-2) ...
450s Selecting previously unselected package libbz2-dev:arm64.
450s Preparing to unpack .../32-libbz2-dev_1.0.8-6_arm64.deb ...
450s Unpacking libbz2-dev:arm64 (1.0.8-6) ...
450s Selecting previously unselected package libdeflate-dev:arm64.
450s Preparing to unpack .../33-libdeflate-dev_1.23-1_arm64.deb ...
450s Unpacking libdeflate-dev:arm64 (1.23-1) ...
450s Selecting previously unselected package libicu-dev:arm64.
450s Preparing to unpack .../34-libicu-dev_76.1-1ubuntu2_arm64.deb ...
450s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ...
450s Selecting previously unselected package libjpeg-turbo8-dev:arm64.
450s Preparing to unpack .../35-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ...
450s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ...
450s Selecting previously unselected package libjpeg8-dev:arm64.
450s Preparing to unpack .../36-libjpeg8-dev_8c-2ubuntu11_arm64.deb ...
450s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ...
450s Selecting previously unselected package libjpeg-dev:arm64.
450s Preparing to unpack .../37-libjpeg-dev_8c-2ubuntu11_arm64.deb ...
450s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ...
450s Selecting previously unselected package liblapack-dev:arm64.
450s Preparing to unpack .../38-liblapack-dev_3.12.1-2_arm64.deb ...
450s Unpacking liblapack-dev:arm64 (3.12.1-2) ...
451s Selecting previously unselected package libncurses-dev:arm64.
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451s Selecting previously unselected package libpcre2-16-0:arm64.
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451s Selecting previously unselected package libpcre2-posix3:arm64.
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451s Selecting previously unselected package zlib1g-dev:arm64.
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451s Unpacking libpng-dev:arm64 (1.6.47-1) ...
451s Selecting previously unselected package libreadline-dev:arm64.
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451s Selecting previously unselected package liblzma-dev:arm64.
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451s Selecting previously unselected package libtirpc-dev:arm64.
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451s Selecting previously unselected package r-base-dev.
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451s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
451s Selecting previously unselected package r-cran-lattice.
451s Preparing to unpack .../54-r-cran-lattice_0.22-6-1_arm64.deb ...
451s Unpacking r-cran-lattice (0.22-6-1) ...
451s Selecting previously unselected package r-cran-mass.
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451s Unpacking r-cran-mass (7.3-64-1) ...
451s Selecting previously unselected package r-cran-matrix.
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451s Selecting previously unselected package r-cran-survival.
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451s Preparing to unpack .../58-r-cran-th.data_1.1-3-1_all.deb ...
451s Unpacking r-cran-th.data (1.1-3-1) ...
452s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ...
452s Setting up libncurses-dev:arm64 (6.5+20250216-2) ...
452s Setting up r-cran-mass (7.3-64-1) ...
452s Setting up libreadline-dev:arm64 (8.2-6) ...
452s Setting up libpcre2-16-0:arm64 (10.45-1) ...
452s Setting up libpcre2-32-0:arm64 (10.45-1) ...
452s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ...
452s Setting up libpkgconf3:arm64 (1.8.1-4) ...
452s Setting up libmpc3:arm64 (1.3.1-1build2) ...
452s Setting up icu-devtools (76.1-1ubuntu2) ...
452s Setting up pkgconf-bin (1.8.1-4) ...
452s Setting up r-cran-lattice (0.22-6-1) ...
452s Setting up liblzma-dev:arm64 (5.6.4-1) ...
452s Setting up libubsan1:arm64 (15-20250222-0ubuntu1) ...
452s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
452s Setting up libpcre2-posix3:arm64 (10.45-1) ...
452s Setting up libhwasan0:arm64 (15-20250222-0ubuntu1) ...
452s Setting up libasan8:arm64 (15-20250222-0ubuntu1) ...
452s Setting up libtsan2:arm64 (15-20250222-0ubuntu1) ...
452s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ...
452s Setting up libisl23:arm64 (0.27-1) ...
452s Setting up libdeflate-dev:arm64 (1.23-1) ...
452s Setting up libicu-dev:arm64 (76.1-1ubuntu2) ...
452s Setting up libcc1-0:arm64 (15-20250222-0ubuntu1) ...
452s Setting up liblsan0:arm64 (15-20250222-0ubuntu1) ...
452s Setting up libblas-dev:arm64 (3.12.1-2) ...
452s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
452s Setting up dctrl-tools (2.24-3build3) ...
452s Setting up libitm1:arm64 (15-20250222-0ubuntu1) ...
452s Setting up libbz2-dev:arm64 (1.0.8-6) ...
452s Setting up libpcre2-dev:arm64 (10.45-1) ...
452s Setting up libpng-dev:arm64 (1.6.47-1) ...
452s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ...
452s Setting up pkgconf:arm64 (1.8.1-4) ...
452s Setting up liblapack-dev:arm64 (3.12.1-2) ...
452s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
452s Setting up r-cran-matrix (1.7-3-1) ...
452s Setting up cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
452s Setting up libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ...
452s Setting up libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ...
452s Setting up libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ...
452s Setting up r-cran-survival (3.8-3-1) ...
452s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
452s Setting up r-cran-th.data (1.1-3-1) ...
452s Setting up cpp-14 (14.2.0-17ubuntu3) ...
452s Setting up cpp (4:14.2.0-1ubuntu1) ...
452s Setting up gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
452s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
452s Setting up g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
452s Setting up gcc-14 (14.2.0-17ubuntu3) ...
452s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
452s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
452s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
452s Setting up g++-14 (14.2.0-17ubuntu3) ...
452s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
452s Setting up gcc (4:14.2.0-1ubuntu1) ...
452s Setting up g++ (4:14.2.0-1ubuntu1) ...
452s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
452s Setting up build-essential (12.10ubuntu1) ...
452s Setting up gfortran (4:14.2.0-1ubuntu1) ...
452s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
452s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
452s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
452s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
452s Setting up r-base-dev (4.4.3-1) ...
452s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
452s Processing triggers for libc-bin (2.41-1ubuntu2) ...
452s Processing triggers for man-db (2.13.0-1) ...
453s Processing triggers for install-info (7.1.1-1) ...
455s autopkgtest [15:47:30]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
455s autopkgtest [15:47:30]: test pkg-r-autopkgtest: [-----------------------
455s Test: Try to load the R library maxstat
455s 
455s R version 4.4.3 (2025-02-28) -- "Trophy Case"
455s Copyright (C) 2025 The R Foundation for Statistical Computing
455s Platform: aarch64-unknown-linux-gnu
455s 
455s R is free software and comes with ABSOLUTELY NO WARRANTY.
455s You are welcome to redistribute it under certain conditions.
455s Type 'license()' or 'licence()' for distribution details.
455s 
455s R is a collaborative project with many contributors.
455s Type 'contributors()' for more information and
455s 'citation()' on how to cite R or R packages in publications.
455s 
455s Type 'demo()' for some demos, 'help()' for on-line help, or
455s 'help.start()' for an HTML browser interface to help.
455s Type 'q()' to quit R.
455s 
455s > library('maxstat')
455s > 
455s > 
455s Other tests are currently unsupported!
455s They will be progressively added.
456s autopkgtest [15:47:31]: test pkg-r-autopkgtest: -----------------------]
456s pkg-r-autopkgtest    PASS
456s autopkgtest [15:47:31]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
456s autopkgtest [15:47:31]: @@@@@@@@@@@@@@@@@@@@ summary
456s run-unit-test        PASS
456s pkg-r-autopkgtest    PASS
461s nova [W] Using flock in prodstack6-arm64
461s Creating nova instance adt-plucky-arm64-r-cran-maxstat-20250315-153955-juju-7f2275-prod-proposed-migration-environment-20-32616d6e-9238-4bd6-a577-c725e400c86d from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)...
461s nova [W] Timed out waiting for 34dd3748-c1fe-4895-af8e-f60cd221c990 to get deleted.