0s autopkgtest [20:40:38]: starting date and time: 2024-11-23 20:40:38+0000
  0s autopkgtest [20:40:38]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky
  0s autopkgtest [20:40:38]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.nttkj44h/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-sf --apt-upgrade r-cran-lwgeom --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-sf/1.0-17+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-32.secgroup --name adt-plucky-arm64-r-cran-lwgeom-20241123-204038-juju-7f2275-prod-proposed-migration-environment-20-6cc3afaf-9791-4b9f-a149-e972cd8804a9 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 97s autopkgtest [20:42:15]: testbed dpkg architecture: arm64
 97s autopkgtest [20:42:15]: testbed apt version: 2.9.8
 97s autopkgtest [20:42:15]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 98s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
 98s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9704 B]
 98s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [53.2 kB]
 98s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [925 kB]
 98s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.6 kB]
 98s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [85.2 kB]
 98s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [57.8 kB]
 98s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [790 kB]
 98s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [19.3 kB]
 99s Fetched 2028 kB in 1s (2145 kB/s)
 99s Reading package lists...
101s Reading package lists...
102s Building dependency tree...
102s Reading state information...
102s Calculating upgrade...
103s The following package was automatically installed and is no longer required:
103s   libsgutils2-1.46-2
103s Use 'sudo apt autoremove' to remove it.
103s The following NEW packages will be installed:
103s   libsgutils2-1.48
103s The following packages will be upgraded:
103s   bash bpftrace curl debconf debconf-i18n distro-info dracut-install
103s   fwupd-signed gir1.2-girepository-2.0 gir1.2-glib-2.0 hostname
103s   libaudit-common libaudit1 libcurl3t64-gnutls libcurl4t64
103s   libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libpam-modules
103s   libpam-modules-bin libpam-runtime libpam0g libplymouth5 libselinux1
103s   libsemanage-common libsemanage2 linux-base lxd-installer openssh-client
103s   openssh-server openssh-sftp-server pinentry-curses plymouth
103s   plymouth-theme-ubuntu-text python3-blinker python3-dbus python3-debconf
103s   python3-gi python3-jsonschema-specifications python3-rpds-py python3-yaml
103s   sg3-utils sg3-utils-udev vim-common vim-tiny xxd
103s 46 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
103s Need to get 11.7 MB of archives.
103s After this operation, 2984 kB of additional disk space will be used.
103s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 bash arm64 5.2.32-1ubuntu2 [791 kB]
104s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 hostname arm64 3.25 [11.0 kB]
104s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libaudit-common all 1:4.0.2-2ubuntu1 [6578 B]
104s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libaudit1 arm64 1:4.0.2-2ubuntu1 [54.2 kB]
104s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 debconf-i18n all 1.5.87ubuntu1 [204 kB]
104s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-debconf all 1.5.87ubuntu1 [4156 B]
104s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 debconf all 1.5.87ubuntu1 [124 kB]
104s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam0g arm64 1.5.3-7ubuntu4 [68.6 kB]
104s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libselinux1 arm64 3.7-3ubuntu1 [81.6 kB]
104s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam-modules-bin arm64 1.5.3-7ubuntu4 [50.4 kB]
104s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam-modules arm64 1.5.3-7ubuntu4 [285 kB]
104s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 openssh-sftp-server arm64 1:9.9p1-3ubuntu2 [36.8 kB]
104s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 openssh-server arm64 1:9.9p1-3ubuntu2 [524 kB]
104s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 openssh-client arm64 1:9.9p1-3ubuntu2 [920 kB]
104s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libpam-runtime all 1.5.3-7ubuntu4 [40.8 kB]
104s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libsemanage-common all 3.7-2build1 [7186 B]
104s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libsemanage2 arm64 3.7-2build1 [92.2 kB]
104s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 distro-info arm64 1.12 [19.4 kB]
104s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gir1.2-girepository-2.0 arm64 1.82.0-2 [25.2 kB]
104s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 gir1.2-glib-2.0 arm64 2.82.2-3 [182 kB]
104s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1560 kB]
104s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libgirepository-1.0-1 arm64 1.82.0-2 [83.0 kB]
104s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libglib2.0-data all 2.82.2-3 [51.7 kB]
104s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dbus arm64 1.3.2-5build4 [109 kB]
104s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-gi arm64 3.50.0-3build1 [279 kB]
104s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-yaml arm64 6.0.2-1build1 [164 kB]
104s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 vim-tiny arm64 2:9.1.0861-1ubuntu1 [805 kB]
104s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 vim-common all 2:9.1.0861-1ubuntu1 [395 kB]
104s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 xxd arm64 2:9.1.0861-1ubuntu1 [67.3 kB]
104s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libplymouth5 arm64 24.004.60-2ubuntu3 [141 kB]
104s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 plymouth-theme-ubuntu-text arm64 24.004.60-2ubuntu3 [9914 B]
104s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 plymouth arm64 24.004.60-2ubuntu3 [135 kB]
104s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 bpftrace arm64 0.21.2-2ubuntu3 [1854 kB]
104s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 curl arm64 8.9.1-2ubuntu3 [235 kB]
104s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libcurl4t64 arm64 8.9.1-2ubuntu3 [365 kB]
104s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 dracut-install arm64 105-2ubuntu2 [34.7 kB]
104s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 fwupd-signed arm64 1.55+1.7-1 [30.9 kB]
104s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libcurl3t64-gnutls arm64 8.9.1-2ubuntu3 [359 kB]
104s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libsgutils2-1.48 arm64 1.48-0ubuntu1 [118 kB]
104s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 linux-base all 4.10.1ubuntu1 [34.8 kB]
104s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 lxd-installer all 10 [5264 B]
104s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-0ubuntu2 [38.5 kB]
104s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-blinker all 1.9.0-1 [10.7 kB]
104s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-rpds-py arm64 0.21.0-2ubuntu1 [302 kB]
104s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jsonschema-specifications all 2023.12.1-2 [9116 B]
104s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 sg3-utils arm64 1.48-0ubuntu1 [999 kB]
104s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 sg3-utils-udev all 1.48-0ubuntu1 [6608 B]
105s Preconfiguring packages ...
105s Fetched 11.7 MB in 1s (9230 kB/s)
106s (Reading database ... 
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106s Preparing to unpack .../bash_5.2.32-1ubuntu2_arm64.deb ...
106s Unpacking bash (5.2.32-1ubuntu2) over (5.2.32-1ubuntu1) ...
106s Setting up bash (5.2.32-1ubuntu2) ...
106s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode
106s (Reading database ... 
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106s Preparing to unpack .../hostname_3.25_arm64.deb ...
106s Unpacking hostname (3.25) over (3.23+nmu2ubuntu2) ...
106s Setting up hostname (3.25) ...
106s (Reading database ... 
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106s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu1_all.deb ...
106s Unpacking libaudit-common (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ...
106s Setting up libaudit-common (1:4.0.2-2ubuntu1) ...
106s (Reading database ... 
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106s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu1_arm64.deb ...
106s Unpacking libaudit1:arm64 (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ...
106s Setting up libaudit1:arm64 (1:4.0.2-2ubuntu1) ...
107s (Reading database ... 
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107s Preparing to unpack .../debconf-i18n_1.5.87ubuntu1_all.deb ...
107s Unpacking debconf-i18n (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
107s Preparing to unpack .../python3-debconf_1.5.87ubuntu1_all.deb ...
107s Unpacking python3-debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
107s Preparing to unpack .../debconf_1.5.87ubuntu1_all.deb ...
107s Unpacking debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
107s Setting up debconf (1.5.87ubuntu1) ...
107s (Reading database ... 
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107s Preparing to unpack .../libpam0g_1.5.3-7ubuntu4_arm64.deb ...
107s Unpacking libpam0g:arm64 (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
107s Setting up libpam0g:arm64 (1.5.3-7ubuntu4) ...
108s (Reading database ... 
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108s Preparing to unpack .../libselinux1_3.7-3ubuntu1_arm64.deb ...
108s Unpacking libselinux1:arm64 (3.7-3ubuntu1) over (3.5-2ubuntu5) ...
108s Setting up libselinux1:arm64 (3.7-3ubuntu1) ...
108s (Reading database ... 
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108s Preparing to unpack .../libpam-modules-bin_1.5.3-7ubuntu4_arm64.deb ...
108s Unpacking libpam-modules-bin (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
108s Setting up libpam-modules-bin (1.5.3-7ubuntu4) ...
108s pam_namespace.service is a disabled or a static unit not running, not starting it.
108s (Reading database ... 
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108s Preparing to unpack .../libpam-modules_1.5.3-7ubuntu4_arm64.deb ...
109s Unpacking libpam-modules:arm64 (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
109s Setting up libpam-modules:arm64 (1.5.3-7ubuntu4) ...
109s (Reading database ... 
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109s Preparing to unpack .../openssh-sftp-server_1%3a9.9p1-3ubuntu2_arm64.deb ...
109s Unpacking openssh-sftp-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
109s Preparing to unpack .../openssh-server_1%3a9.9p1-3ubuntu2_arm64.deb ...
109s Unpacking openssh-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
109s Preparing to unpack .../openssh-client_1%3a9.9p1-3ubuntu2_arm64.deb ...
109s Unpacking openssh-client (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
109s Preparing to unpack .../libpam-runtime_1.5.3-7ubuntu4_all.deb ...
109s Unpacking libpam-runtime (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
109s Setting up libpam-runtime (1.5.3-7ubuntu4) ...
110s (Reading database ... 
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110s Preparing to unpack .../libsemanage-common_3.7-2build1_all.deb ...
110s Unpacking libsemanage-common (3.7-2build1) over (3.5-1build6) ...
110s Setting up libsemanage-common (3.7-2build1) ...
110s (Reading database ... 
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110s Preparing to unpack .../libsemanage2_3.7-2build1_arm64.deb ...
110s Unpacking libsemanage2:arm64 (3.7-2build1) over (3.5-1build6) ...
110s Setting up libsemanage2:arm64 (3.7-2build1) ...
110s (Reading database ... 
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110s Preparing to unpack .../00-distro-info_1.12_arm64.deb ...
110s Unpacking distro-info (1.12) over (1.9) ...
110s Preparing to unpack .../01-gir1.2-girepository-2.0_1.82.0-2_arm64.deb ...
110s Unpacking gir1.2-girepository-2.0:arm64 (1.82.0-2) over (1.80.1-4) ...
110s Preparing to unpack .../02-gir1.2-glib-2.0_2.82.2-3_arm64.deb ...
110s Unpacking gir1.2-glib-2.0:arm64 (2.82.2-3) over (2.82.1-0ubuntu1) ...
110s Preparing to unpack .../03-libglib2.0-0t64_2.82.2-3_arm64.deb ...
110s Unpacking libglib2.0-0t64:arm64 (2.82.2-3) over (2.82.1-0ubuntu1) ...
110s Preparing to unpack .../04-libgirepository-1.0-1_1.82.0-2_arm64.deb ...
110s Unpacking libgirepository-1.0-1:arm64 (1.82.0-2) over (1.80.1-4) ...
110s Preparing to unpack .../05-libglib2.0-data_2.82.2-3_all.deb ...
110s Unpacking libglib2.0-data (2.82.2-3) over (2.82.1-0ubuntu1) ...
110s Preparing to unpack .../06-python3-dbus_1.3.2-5build4_arm64.deb ...
110s Unpacking python3-dbus (1.3.2-5build4) over (1.3.2-5build3) ...
111s Preparing to unpack .../07-python3-gi_3.50.0-3build1_arm64.deb ...
111s Unpacking python3-gi (3.50.0-3build1) over (3.50.0-3) ...
111s Preparing to unpack .../08-python3-yaml_6.0.2-1build1_arm64.deb ...
111s Unpacking python3-yaml (6.0.2-1build1) over (6.0.2-1) ...
111s Preparing to unpack .../09-vim-tiny_2%3a9.1.0861-1ubuntu1_arm64.deb ...
111s Unpacking vim-tiny (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ...
111s Preparing to unpack .../10-vim-common_2%3a9.1.0861-1ubuntu1_all.deb ...
111s Unpacking vim-common (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ...
111s Preparing to unpack .../11-xxd_2%3a9.1.0861-1ubuntu1_arm64.deb ...
111s Unpacking xxd (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ...
111s Preparing to unpack .../12-libplymouth5_24.004.60-2ubuntu3_arm64.deb ...
111s Unpacking libplymouth5:arm64 (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ...
111s Preparing to unpack .../13-plymouth-theme-ubuntu-text_24.004.60-2ubuntu3_arm64.deb ...
111s Unpacking plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ...
111s Preparing to unpack .../14-plymouth_24.004.60-2ubuntu3_arm64.deb ...
111s Unpacking plymouth (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ...
111s Preparing to unpack .../15-bpftrace_0.21.2-2ubuntu3_arm64.deb ...
111s Unpacking bpftrace (0.21.2-2ubuntu3) over (0.21.2-2ubuntu2) ...
112s Preparing to unpack .../16-curl_8.9.1-2ubuntu3_arm64.deb ...
112s Unpacking curl (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ...
112s Preparing to unpack .../17-libcurl4t64_8.9.1-2ubuntu3_arm64.deb ...
112s Unpacking libcurl4t64:arm64 (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ...
112s Preparing to unpack .../18-dracut-install_105-2ubuntu2_arm64.deb ...
112s Unpacking dracut-install (105-2ubuntu2) over (105-1ubuntu1) ...
112s Preparing to unpack .../19-fwupd-signed_1.55+1.7-1_arm64.deb ...
112s Unpacking fwupd-signed (1.55+1.7-1) over (1.54+1.6-1build1) ...
112s Preparing to unpack .../20-libcurl3t64-gnutls_8.9.1-2ubuntu3_arm64.deb ...
112s Unpacking libcurl3t64-gnutls:arm64 (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ...
112s Selecting previously unselected package libsgutils2-1.48:arm64.
112s Preparing to unpack .../21-libsgutils2-1.48_1.48-0ubuntu1_arm64.deb ...
112s Unpacking libsgutils2-1.48:arm64 (1.48-0ubuntu1) ...
112s Preparing to unpack .../22-linux-base_4.10.1ubuntu1_all.deb ...
112s Unpacking linux-base (4.10.1ubuntu1) over (4.5ubuntu9) ...
112s Preparing to unpack .../23-lxd-installer_10_all.deb ...
112s Unpacking lxd-installer (10) over (9) ...
112s Preparing to unpack .../24-pinentry-curses_1.3.1-0ubuntu2_arm64.deb ...
112s Unpacking pinentry-curses (1.3.1-0ubuntu2) over (1.2.1-3ubuntu5) ...
112s Preparing to unpack .../25-python3-blinker_1.9.0-1_all.deb ...
112s Unpacking python3-blinker (1.9.0-1) over (1.8.2-1) ...
113s Preparing to unpack .../26-python3-rpds-py_0.21.0-2ubuntu1_arm64.deb ...
113s Unpacking python3-rpds-py (0.21.0-2ubuntu1) over (0.20.0-0ubuntu3) ...
113s Preparing to unpack .../27-python3-jsonschema-specifications_2023.12.1-2_all.deb ...
113s Unpacking python3-jsonschema-specifications (2023.12.1-2) over (2023.12.1-1ubuntu1) ...
113s Preparing to unpack .../28-sg3-utils_1.48-0ubuntu1_arm64.deb ...
113s Unpacking sg3-utils (1.48-0ubuntu1) over (1.46-3ubuntu5) ...
113s Preparing to unpack .../29-sg3-utils-udev_1.48-0ubuntu1_all.deb ...
113s Unpacking sg3-utils-udev (1.48-0ubuntu1) over (1.46-3ubuntu5) ...
113s Setting up pinentry-curses (1.3.1-0ubuntu2) ...
113s Setting up distro-info (1.12) ...
113s Setting up linux-base (4.10.1ubuntu1) ...
113s Setting up libcurl4t64:arm64 (8.9.1-2ubuntu3) ...
113s Setting up bpftrace (0.21.2-2ubuntu3) ...
113s Setting up openssh-client (1:9.9p1-3ubuntu2) ...
113s Setting up python3-debconf (1.5.87ubuntu1) ...
114s Setting up libcurl3t64-gnutls:arm64 (8.9.1-2ubuntu3) ...
114s Setting up fwupd-signed (1.55+1.7-1) ...
114s Setting up libsgutils2-1.48:arm64 (1.48-0ubuntu1) ...
114s Setting up python3-yaml (6.0.2-1build1) ...
114s Setting up debconf-i18n (1.5.87ubuntu1) ...
114s Setting up xxd (2:9.1.0861-1ubuntu1) ...
114s Setting up libglib2.0-0t64:arm64 (2.82.2-3) ...
114s No schema files found: doing nothing.
114s Setting up libglib2.0-data (2.82.2-3) ...
114s Setting up vim-common (2:9.1.0861-1ubuntu1) ...
114s Setting up gir1.2-glib-2.0:arm64 (2.82.2-3) ...
114s Setting up lxd-installer (10) ...
115s Setting up python3-rpds-py (0.21.0-2ubuntu1) ...
115s Setting up dracut-install (105-2ubuntu2) ...
115s Setting up libplymouth5:arm64 (24.004.60-2ubuntu3) ...
115s Setting up libgirepository-1.0-1:arm64 (1.82.0-2) ...
115s Setting up curl (8.9.1-2ubuntu3) ...
115s Setting up python3-jsonschema-specifications (2023.12.1-2) ...
115s Setting up sg3-utils (1.48-0ubuntu1) ...
115s Setting up python3-blinker (1.9.0-1) ...
115s Setting up openssh-sftp-server (1:9.9p1-3ubuntu2) ...
115s Setting up python3-dbus (1.3.2-5build4) ...
116s Setting up openssh-server (1:9.9p1-3ubuntu2) ...
116s Installing new version of config file /etc/ssh/moduli ...
116s Replacing config file /etc/ssh/sshd_config with new version
117s Setting up plymouth (24.004.60-2ubuntu3) ...
117s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
117s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
137s flash-kernel: deferring update (trigger activated)
137s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
137s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
137s Setting up vim-tiny (2:9.1.0861-1ubuntu1) ...
137s Setting up sg3-utils-udev (1.48-0ubuntu1) ...
137s update-initramfs: deferring update (trigger activated)
137s Setting up plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) ...
137s update-initramfs: deferring update (trigger activated)
137s Setting up gir1.2-girepository-2.0:arm64 (1.82.0-2) ...
137s Setting up python3-gi (3.50.0-3build1) ...
138s Processing triggers for install-info (7.1.1-1) ...
138s Processing triggers for initramfs-tools (0.142ubuntu35) ...
138s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
138s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
158s System running in EFI mode, skipping.
158s Processing triggers for libc-bin (2.40-1ubuntu3) ...
159s Processing triggers for ufw (0.36.2-8) ...
159s Processing triggers for man-db (2.13.0-1) ...
160s Processing triggers for debianutils (5.21) ...
160s Processing triggers for flash-kernel (3.107ubuntu13) ...
161s System running in EFI mode, skipping.
161s Reading package lists...
161s Building dependency tree...
161s Reading state information...
162s The following packages will be REMOVED:
162s   libsgutils2-1.46-2*
163s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
163s After this operation, 314 kB disk space will be freed.
163s (Reading database ... 
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(Reading database ... 80037 files and directories currently installed.)
163s Removing libsgutils2-1.46-2:arm64 (1.46-3ubuntu5) ...
163s Processing triggers for libc-bin (2.40-1ubuntu3) ...
164s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
164s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
164s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
164s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
165s Reading package lists...
165s Reading package lists...
166s Building dependency tree...
166s Reading state information...
166s Calculating upgrade...
167s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
167s Reading package lists...
167s Building dependency tree...
167s Reading state information...
168s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
168s autopkgtest [20:43:26]: rebooting testbed after setup commands that affected boot
172s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
194s autopkgtest [20:43:52]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024
197s autopkgtest [20:43:55]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-lwgeom
199s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-lwgeom 0.2-13-3build2 (dsc) [2591 B]
199s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-lwgeom 0.2-13-3build2 (tar) [475 kB]
199s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-lwgeom 0.2-13-3build2 (diff) [4332 B]
200s gpgv: Signature made Mon Apr  1 07:22:26 2024 UTC
200s gpgv:                using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984
200s gpgv: Can't check signature: No public key
200s dpkg-source: warning: cannot verify inline signature for ./r-cran-lwgeom_0.2-13-3build2.dsc: no acceptable signature found
200s autopkgtest [20:43:58]: testing package r-cran-lwgeom version 0.2-13-3build2
200s autopkgtest [20:43:58]: build not needed
202s autopkgtest [20:44:00]: test run-unit-test: preparing testbed
205s Reading package lists...
205s Building dependency tree...
205s Reading state information...
205s Starting pkgProblemResolver with broken count: 0
205s Starting 2 pkgProblemResolver with broken count: 0
205s Done
206s The following additional packages will be installed:
206s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
206s   fonts-glyphicons-halflings gdal-data gdal-plugins libaec0 libaom3
206s   libarmadillo14 libarpack2t64 libblas3 libblosc1 libcairo2 libcfitsio10t64
206s   libdatrie1 libde265-0 libdeflate0 libfontconfig1 libfreexl1 libfyba0t64
206s   libgdal35 libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran5 libgif7
206s   libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b libhdf4-0-alt
206s   libhdf5-103-1t64 libhdf5-hl-100t64 libheif-plugin-aomdec
206s   libheif-plugin-libde265 libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8
206s   libjs-bootstrap libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack3
206s   liblcms2-2 liblerc4 libltdl7 libminizip1t64 libmysqlclient21 libnetcdf19t64
206s   libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7 libpango-1.0-0
206s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0
206s   libpoppler140 libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6
206s   libsnappy1v5 libspatialite8t64 libsz2 libtcl8.6 libthai-data libthai0
206s   libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7
206s   libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1
206s   libxt6t64 littler mysql-common node-html5shiv proj-data r-base-core
206s   r-cran-askpass r-cran-brio r-cran-callr r-cran-class r-cran-classint
206s   r-cran-cli r-cran-covr r-cran-crayon r-cran-curl r-cran-dbi r-cran-desc
206s   r-cran-diffobj r-cran-digest r-cran-e1071 r-cran-evaluate r-cran-fansi
206s   r-cran-fs r-cran-geosphere r-cran-glue r-cran-httr r-cran-jsonlite
206s   r-cran-kernsmooth r-cran-lattice r-cran-lazyeval r-cran-lifecycle
206s   r-cran-littler r-cran-lwgeom r-cran-magrittr r-cran-mass r-cran-mime
206s   r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig
206s   r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx r-cran-proxy
206s   r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rematch2 r-cran-rex r-cran-rlang
206s   r-cran-rprojroot r-cran-s2 r-cran-sf r-cran-sp r-cran-sys r-cran-testthat
206s   r-cran-tibble r-cran-units r-cran-utf8 r-cran-vctrs r-cran-waldo
206s   r-cran-withr r-cran-wk r-cran-yaml unixodbc-common unzip x11-common
206s   xdg-utils zip
206s Suggested packages:
206s   geotiff-bin gdal-bin libgeotiff-epsg libhdf4-alt-dev hdf4-tools
206s   libheif-plugin-x265 libheif-plugin-ffmpegdec libheif-plugin-jpegdec
206s   libheif-plugin-jpegenc libheif-plugin-j2kdec libheif-plugin-j2kenc
206s   libheif-plugin-kvazaar libheif-plugin-rav1e libheif-plugin-svtenc
206s   liblcms2-utils odbc-postgresql tdsodbc ogdi-bin proj-bin tcl8.6 tk8.6 nodejs
206s   elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-rstudioapi
206s   r-cran-rmysql r-cran-knitr r-cran-rmarkdown r-cran-getopt r-cran-bit64
206s   r-cran-dplyr r-cran-formattable r-cran-ggplot2 r-cran-nanotime
206s   r-cran-palmerpenguins r-cran-scales r-cran-stringi r-cran-survival
206s   r-cran-vdiffr r-cran-inline r-cran-hmisc r-cran-roxygen2 r-cran-rvest
206s   r-cran-stringr r-cran-bench r-cran-blob r-cran-here r-cran-hms
206s   r-cran-htmltools r-cran-purrr r-cran-tidyr
206s Recommended packages:
206s   proj-bin libheif-plugin-aomenc poppler-data r-recommended r-base-dev
206s   r-doc-html r-cran-mockery r-cran-spelling r-cran-spdata r-cran-knitr
206s   r-cran-rmarkdown r-cran-tinytest r-cran-htmltools r-cran-htmlwidgets
206s   r-cran-rstudioapi r-cran-whoami r-cran-dt r-cran-xml2 r-cran-memoise
206s   r-cran-later r-cran-httpuv r-cran-webutils r-cran-gh r-cran-ggplot2
206s   r-cran-unitizer r-cran-raster r-cran-dplyr r-cran-rsqlite r-cran-jpeg
206s   r-cran-png r-cran-readr r-cran-r.rsp r-cran-lintr r-cran-tidyverse
206s   r-cran-sodium r-cran-lubridate r-cran-cpp11 r-cran-bitops r-cran-mathjaxr
206s   r-cran-remotes r-cran-usethis r-cran-codetools r-cran-webfakes r-cran-cba
206s   r-cran-pingr r-cran-mockr r-cran-bit64 r-cran-blob r-cran-nanoarrow
206s   r-cran-maps r-cran-matrix r-cran-microbenchmark r-cran-pbapply
206s   r-cran-rpostgresql r-cran-spatstat r-cran-spatstat.geom
206s   r-cran-spatstat.random r-cran-spatstat.linnet r-cran-spatstat.utils
206s   r-cran-stars r-cran-terra r-cran-tidyr r-cran-tidyselect r-cran-rcolorbrewer
206s   r-cran-gstat r-cran-deldir r-cran-shiny r-cran-data.table r-cran-formattable
206s   r-cran-vdiffr r-cran-generics r-cran-pkgdown r-cran-zeallot r-cran-runit
206s   libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
206s   x11-xserver-utils
206s The following NEW packages will be installed:
206s   autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core
206s   fonts-dejavu-mono fonts-glyphicons-halflings gdal-data gdal-plugins libaec0
206s   libaom3 libarmadillo14 libarpack2t64 libblas3 libblosc1 libcairo2
206s   libcfitsio10t64 libdatrie1 libde265-0 libdeflate0 libfontconfig1 libfreexl1
206s   libfyba0t64 libgdal35 libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran5
206s   libgif7 libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b libhdf4-0-alt
206s   libhdf5-103-1t64 libhdf5-hl-100t64 libheif-plugin-aomdec
206s   libheif-plugin-libde265 libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8
206s   libjs-bootstrap libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack3
206s   liblcms2-2 liblerc4 libltdl7 libminizip1t64 libmysqlclient21 libnetcdf19t64
206s   libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7 libpango-1.0-0
206s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0
206s   libpoppler140 libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6
206s   libsnappy1v5 libspatialite8t64 libsz2 libtcl8.6 libthai-data libthai0
206s   libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7
206s   libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1
206s   libxt6t64 littler mysql-common node-html5shiv proj-data r-base-core
206s   r-cran-askpass r-cran-brio r-cran-callr r-cran-class r-cran-classint
206s   r-cran-cli r-cran-covr r-cran-crayon r-cran-curl r-cran-dbi r-cran-desc
206s   r-cran-diffobj r-cran-digest r-cran-e1071 r-cran-evaluate r-cran-fansi
206s   r-cran-fs r-cran-geosphere r-cran-glue r-cran-httr r-cran-jsonlite
206s   r-cran-kernsmooth r-cran-lattice r-cran-lazyeval r-cran-lifecycle
206s   r-cran-littler r-cran-lwgeom r-cran-magrittr r-cran-mass r-cran-mime
206s   r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig
206s   r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx r-cran-proxy
206s   r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rematch2 r-cran-rex r-cran-rlang
206s   r-cran-rprojroot r-cran-s2 r-cran-sf r-cran-sp r-cran-sys r-cran-testthat
206s   r-cran-tibble r-cran-units r-cran-utf8 r-cran-vctrs r-cran-waldo
206s   r-cran-withr r-cran-wk r-cran-yaml unixodbc-common unzip x11-common
206s   xdg-utils zip
206s 0 upgraded, 158 newly installed, 0 to remove and 0 not upgraded.
206s Need to get 102 MB/102 MB of archives.
206s After this operation, 250 MB of additional disk space will be used.
206s Get:1 /tmp/autopkgtest.ZW5IGF/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [732 B]
207s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
207s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
207s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB]
207s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB]
207s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB]
207s Get:7 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
207s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-data all 3.9.3+dfsg-1build1 [269 kB]
207s Get:9 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-plugins arm64 3.9.3+dfsg-1build1 [25.3 kB]
207s Get:10 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB]
207s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libaom3 arm64 3.11.0-1 [1837 kB]
207s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB]
207s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB]
207s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB]
207s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarpack2t64 arm64 3.9.1-1.1ubuntu1 [94.3 kB]
207s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarmadillo14 arm64 1:14.0.1+dfsg-2build1 [104 kB]
207s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB]
207s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 libblosc1 arm64 1.21.5+ds-1build1 [25.7 kB]
207s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
207s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
207s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
207s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
207s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
207s Get:24 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcfitsio10t64 arm64 4.4.1-2 [511 kB]
207s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
207s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libde265-0 arm64 1.0.15-1build4 [146 kB]
207s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB]
207s Get:28 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfyba0t64 arm64 4.1.1-11build1 [120 kB]
207s Get:29 http://ftpmaster.internal/ubuntu plucky/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [23.1 kB]
207s Get:30 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfreexl1 arm64 2.0.0-1build2 [41.9 kB]
207s Get:31 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos3.13.0 arm64 3.13.0-1 [918 kB]
207s Get:32 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos-c1t64 arm64 3.13.0-1 [92.6 kB]
207s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 proj-data all 9.5.0-1 [7919 kB]
208s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
208s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
208s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
208s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
208s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB]
208s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB]
208s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
208s Get:41 http://ftpmaster.internal/ubuntu plucky/universe arm64 libproj25 arm64 9.5.0-1 [1339 kB]
208s Get:42 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeotiff5 arm64 1.7.3-1 [60.8 kB]
208s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB]
208s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B]
208s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf4-0-alt arm64 4.3.0-1 [271 kB]
208s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB]
208s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-aomdec arm64 1.19.3-1 [11.3 kB]
208s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-libde265 arm64 1.19.3-1 [8722 B]
208s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif1 arm64 1.19.3-1 [362 kB]
208s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB]
208s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlbase1t64 arm64 1.3.0-12build1 [47.8 kB]
208s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmldom1t64 arm64 1.3.0-12build1 [146 kB]
208s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlengine1t64 arm64 1.3.0-12build1 [68.1 kB]
208s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 mysql-common all 5.8+1.1.1 [6800 B]
208s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libmysqlclient21 arm64 8.0.40-1 [1241 kB]
208s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB]
208s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnetcdf19t64 arm64 1:4.9.2-6ubuntu1 [466 kB]
208s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libltdl7 arm64 2.4.7-8 [40.6 kB]
208s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbc2 arm64 2.3.12-1ubuntu1 [145 kB]
208s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B]
208s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbcinst2 arm64 2.3.12-1ubuntu1 [29.8 kB]
208s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 libogdi4.1 arm64 4.1.1+ds-5 [217 kB]
208s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu1 [182 kB]
208s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libgpgmepp6t64 arm64 1.24.0-2ubuntu1 [119 kB]
208s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB]
208s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libpoppler140 arm64 24.08.0-3 [1124 kB]
208s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libpq5 arm64 17.0-1 [248 kB]
208s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB]
208s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 librttopo1 arm64 1.1.0-3build2 [187 kB]
208s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 libspatialite8t64 arm64 5.1.0-3build1 [1814 kB]
208s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3 [874 kB]
208s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgdal35 arm64 3.9.3+dfsg-1build1 [8678 kB]
209s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB]
209s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
209s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.0.1-1 [487 kB]
209s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
209s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
209s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
209s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
209s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
209s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-3 [234 kB]
209s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-3 [48.9 kB]
209s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-3 [27.5 kB]
209s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper1 arm64 1.1.29build1 [13.4 kB]
209s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 1.1.29build1 [8490 B]
209s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
209s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [987 kB]
209s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
209s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
209s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.15-1 [774 kB]
209s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-data all 2.2.28-7build1 [19.4 kB]
209s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-0 arm64 2.2.28-7build1 [52.8 kB]
209s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
209s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu1 [172 kB]
209s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
209s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB]
209s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.2-1 [28.4 MB]
210s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-1 [96.4 kB]
210s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-1 [2486 B]
210s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
210s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB]
210s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB]
211s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB]
211s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.8.0-1 [395 kB]
211s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB]
211s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.4-1 [352 kB]
211s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB]
211s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-61-1 [1107 kB]
211s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-class arm64 7.3-22-2build1 [88.3 kB]
211s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB]
211s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-e1071 arm64 1.7-16-1 [563 kB]
211s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-kernsmooth arm64 2.23-24-1 [92.6 kB]
211s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-classint arm64 0.4-10+dfsg-1 [106 kB]
211s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB]
211s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB]
211s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB]
211s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB]
211s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rex all 1.2.1-1 [129 kB]
211s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-curl arm64 5.2.1+dfsg-1 [179 kB]
211s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB]
211s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-openssl arm64 2.2.0+dfsg-1 [404 kB]
211s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB]
211s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB]
211s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
211s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB]
211s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB]
211s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB]
211s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB]
211s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB]
211s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.0-1 [111 kB]
211s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB]
211s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.4+dfsg-1 [244 kB]
211s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
211s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.13-1-1 [1973 kB]
211s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB]
211s Get:136 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sp arm64 1:2.1-4+dfsg-1 [1472 kB]
211s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-geosphere arm64 1.5-18-1 [991 kB]
211s Get:138 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB]
211s Get:139 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.4-1 [1707 kB]
211s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
211s Get:141 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-units arm64 0.8-5+dfsg-1 [270 kB]
211s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
211s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-wk arm64 0.9.4-1 [1790 kB]
211s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-s2 arm64 1.1.7-1 [1987 kB]
211s Get:145 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-sf arm64 1.0-17+dfsg-1 [3232 kB]
211s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lwgeom arm64 0.2-13-3build2 [383 kB]
211s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB]
211s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB]
211s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB]
211s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.4-1 [212 kB]
211s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
211s Get:152 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB]
211s Get:153 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB]
211s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB]
211s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB]
212s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB]
212s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.5.3-1 [120 kB]
212s Get:158 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.1.1-1 [1629 kB]
212s Preconfiguring packages ...
212s Fetched 102 MB in 5s (19.1 MB/s)
212s Selecting previously unselected package fonts-dejavu-mono.
213s (Reading database ... 
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80032 files and directories currently installed.)
213s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ...
213s Unpacking fonts-dejavu-mono (2.37-8) ...
213s Selecting previously unselected package fonts-dejavu-core.
213s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ...
213s Unpacking fonts-dejavu-core (2.37-8) ...
213s Selecting previously unselected package fontconfig-config.
213s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ...
213s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
213s Selecting previously unselected package libfontconfig1:arm64.
213s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ...
213s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ...
213s Selecting previously unselected package fontconfig.
213s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ...
213s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
213s Selecting previously unselected package fonts-glyphicons-halflings.
213s Preparing to unpack .../005-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
213s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
213s Selecting previously unselected package gdal-data.
213s Preparing to unpack .../006-gdal-data_3.9.3+dfsg-1build1_all.deb ...
213s Unpacking gdal-data (3.9.3+dfsg-1build1) ...
213s Selecting previously unselected package gdal-plugins:arm64.
213s Preparing to unpack .../007-gdal-plugins_3.9.3+dfsg-1build1_arm64.deb ...
213s Unpacking gdal-plugins:arm64 (3.9.3+dfsg-1build1) ...
213s Selecting previously unselected package libaec0:arm64.
213s Preparing to unpack .../008-libaec0_1.1.3-1_arm64.deb ...
213s Unpacking libaec0:arm64 (1.1.3-1) ...
213s Selecting previously unselected package libaom3:arm64.
213s Preparing to unpack .../009-libaom3_3.11.0-1_arm64.deb ...
213s Unpacking libaom3:arm64 (3.11.0-1) ...
213s Selecting previously unselected package libblas3:arm64.
213s Preparing to unpack .../010-libblas3_3.12.0-3build2_arm64.deb ...
213s Unpacking libblas3:arm64 (3.12.0-3build2) ...
213s Selecting previously unselected package libgfortran5:arm64.
213s Preparing to unpack .../011-libgfortran5_14.2.0-8ubuntu1_arm64.deb ...
213s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ...
213s Selecting previously unselected package liblapack3:arm64.
213s Preparing to unpack .../012-liblapack3_3.12.0-3build2_arm64.deb ...
213s Unpacking liblapack3:arm64 (3.12.0-3build2) ...
213s Selecting previously unselected package libarpack2t64:arm64.
213s Preparing to unpack .../013-libarpack2t64_3.9.1-1.1ubuntu1_arm64.deb ...
213s Unpacking libarpack2t64:arm64 (3.9.1-1.1ubuntu1) ...
213s Selecting previously unselected package libarmadillo14.
213s Preparing to unpack .../014-libarmadillo14_1%3a14.0.1+dfsg-2build1_arm64.deb ...
213s Unpacking libarmadillo14 (1:14.0.1+dfsg-2build1) ...
213s Selecting previously unselected package libsnappy1v5:arm64.
213s Preparing to unpack .../015-libsnappy1v5_1.2.1-1_arm64.deb ...
213s Unpacking libsnappy1v5:arm64 (1.2.1-1) ...
213s Selecting previously unselected package libblosc1:arm64.
213s Preparing to unpack .../016-libblosc1_1.21.5+ds-1build1_arm64.deb ...
213s Unpacking libblosc1:arm64 (1.21.5+ds-1build1) ...
214s Selecting previously unselected package libpixman-1-0:arm64.
214s Preparing to unpack .../017-libpixman-1-0_0.44.0-3_arm64.deb ...
214s Unpacking libpixman-1-0:arm64 (0.44.0-3) ...
214s Selecting previously unselected package libxcb-render0:arm64.
214s Preparing to unpack .../018-libxcb-render0_1.17.0-2_arm64.deb ...
214s Unpacking libxcb-render0:arm64 (1.17.0-2) ...
214s Selecting previously unselected package libxcb-shm0:arm64.
214s Preparing to unpack .../019-libxcb-shm0_1.17.0-2_arm64.deb ...
214s Unpacking libxcb-shm0:arm64 (1.17.0-2) ...
214s Selecting previously unselected package libxrender1:arm64.
214s Preparing to unpack .../020-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ...
214s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ...
214s Selecting previously unselected package libcairo2:arm64.
214s Preparing to unpack .../021-libcairo2_1.18.2-2_arm64.deb ...
214s Unpacking libcairo2:arm64 (1.18.2-2) ...
214s Selecting previously unselected package libcfitsio10t64:arm64.
214s Preparing to unpack .../022-libcfitsio10t64_4.4.1-2_arm64.deb ...
214s Unpacking libcfitsio10t64:arm64 (4.4.1-2) ...
214s Selecting previously unselected package libdatrie1:arm64.
214s Preparing to unpack .../023-libdatrie1_0.2.13-3build1_arm64.deb ...
214s Unpacking libdatrie1:arm64 (0.2.13-3build1) ...
214s Selecting previously unselected package libde265-0:arm64.
214s Preparing to unpack .../024-libde265-0_1.0.15-1build4_arm64.deb ...
214s Unpacking libde265-0:arm64 (1.0.15-1build4) ...
214s Selecting previously unselected package libdeflate0:arm64.
214s Preparing to unpack .../025-libdeflate0_1.22-1_arm64.deb ...
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214s Selecting previously unselected package libfyba0t64:arm64.
214s Preparing to unpack .../026-libfyba0t64_4.1.1-11build1_arm64.deb ...
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214s Selecting previously unselected package libminizip1t64:arm64.
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214s Unpacking libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
214s Selecting previously unselected package libfreexl1:arm64.
214s Preparing to unpack .../028-libfreexl1_2.0.0-1build2_arm64.deb ...
214s Unpacking libfreexl1:arm64 (2.0.0-1build2) ...
214s Selecting previously unselected package libgeos3.13.0:arm64.
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214s Unpacking libgeos3.13.0:arm64 (3.13.0-1) ...
214s Selecting previously unselected package libgeos-c1t64:arm64.
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214s Selecting previously unselected package proj-data.
214s Preparing to unpack .../031-proj-data_9.5.0-1_all.deb ...
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214s Selecting previously unselected package libjbig0:arm64.
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214s Selecting previously unselected package libjpeg-turbo8:arm64.
214s Preparing to unpack .../033-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ...
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214s Selecting previously unselected package libjpeg8:arm64.
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214s Selecting previously unselected package liblerc4:arm64.
214s Preparing to unpack .../035-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ...
214s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
214s Selecting previously unselected package libsharpyuv0:arm64.
214s Preparing to unpack .../036-libsharpyuv0_1.4.0-0.1_arm64.deb ...
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214s Selecting previously unselected package libwebp7:arm64.
214s Preparing to unpack .../037-libwebp7_1.4.0-0.1_arm64.deb ...
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214s Selecting previously unselected package libtiff6:arm64.
214s Preparing to unpack .../038-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ...
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214s Selecting previously unselected package libgeotiff5:arm64.
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214s Selecting previously unselected package libgif7:arm64.
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214s Selecting previously unselected package libsz2:arm64.
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215s Selecting previously unselected package libhdf4-0-alt:arm64.
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215s Selecting previously unselected package libhdf5-103-1t64:arm64.
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215s Selecting previously unselected package libheif-plugin-aomdec:arm64.
215s Preparing to unpack .../045-libheif-plugin-aomdec_1.19.3-1_arm64.deb ...
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215s Selecting previously unselected package libheif-plugin-libde265:arm64.
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215s Selecting previously unselected package liburiparser1:arm64.
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215s Selecting previously unselected package libkmlbase1t64:arm64.
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215s Selecting previously unselected package libkmlengine1t64:arm64.
215s Preparing to unpack .../051-libkmlengine1t64_1.3.0-12build1_arm64.deb ...
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215s Selecting previously unselected package mysql-common.
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215s Selecting previously unselected package libmysqlclient21:arm64.
215s Preparing to unpack .../053-libmysqlclient21_8.0.40-1_arm64.deb ...
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215s Selecting previously unselected package libhdf5-hl-100t64:arm64.
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215s Selecting previously unselected package libnetcdf19t64:arm64.
215s Preparing to unpack .../055-libnetcdf19t64_1%3a4.9.2-6ubuntu1_arm64.deb ...
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215s Selecting previously unselected package libltdl7:arm64.
215s Preparing to unpack .../056-libltdl7_2.4.7-8_arm64.deb ...
215s Unpacking libltdl7:arm64 (2.4.7-8) ...
215s Selecting previously unselected package libodbc2:arm64.
215s Preparing to unpack .../057-libodbc2_2.3.12-1ubuntu1_arm64.deb ...
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215s Selecting previously unselected package unixodbc-common.
215s Preparing to unpack .../058-unixodbc-common_2.3.12-1ubuntu1_all.deb ...
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215s Selecting previously unselected package libodbcinst2:arm64.
215s Preparing to unpack .../059-libodbcinst2_2.3.12-1ubuntu1_arm64.deb ...
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215s Selecting previously unselected package libogdi4.1:arm64.
215s Preparing to unpack .../060-libogdi4.1_4.1.1+ds-5_arm64.deb ...
215s Unpacking libogdi4.1:arm64 (4.1.1+ds-5) ...
215s Selecting previously unselected package libopenjp2-7:arm64.
215s Preparing to unpack .../061-libopenjp2-7_2.5.0-2ubuntu1_arm64.deb ...
215s Unpacking libopenjp2-7:arm64 (2.5.0-2ubuntu1) ...
215s Selecting previously unselected package libgpgmepp6t64:arm64.
215s Preparing to unpack .../062-libgpgmepp6t64_1.24.0-2ubuntu1_arm64.deb ...
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215s Selecting previously unselected package liblcms2-2:arm64.
215s Preparing to unpack .../063-liblcms2-2_2.16-2_arm64.deb ...
215s Unpacking liblcms2-2:arm64 (2.16-2) ...
215s Selecting previously unselected package libpoppler140:arm64.
215s Preparing to unpack .../064-libpoppler140_24.08.0-3_arm64.deb ...
215s Unpacking libpoppler140:arm64 (24.08.0-3) ...
215s Selecting previously unselected package libpq5:arm64.
215s Preparing to unpack .../065-libpq5_17.0-1_arm64.deb ...
215s Unpacking libpq5:arm64 (17.0-1) ...
215s Selecting previously unselected package libqhull-r8.0:arm64.
215s Preparing to unpack .../066-libqhull-r8.0_2020.2-6build1_arm64.deb ...
215s Unpacking libqhull-r8.0:arm64 (2020.2-6build1) ...
215s Selecting previously unselected package librttopo1:arm64.
215s Preparing to unpack .../067-librttopo1_1.1.0-3build2_arm64.deb ...
215s Unpacking librttopo1:arm64 (1.1.0-3build2) ...
215s Selecting previously unselected package libspatialite8t64:arm64.
216s Preparing to unpack .../068-libspatialite8t64_5.1.0-3build1_arm64.deb ...
216s Unpacking libspatialite8t64:arm64 (5.1.0-3build1) ...
216s Selecting previously unselected package libxerces-c3.2t64:arm64.
216s Preparing to unpack .../069-libxerces-c3.2t64_3.2.4+debian-1.3_arm64.deb ...
216s Unpacking libxerces-c3.2t64:arm64 (3.2.4+debian-1.3) ...
216s Selecting previously unselected package libgdal35:arm64.
216s Preparing to unpack .../070-libgdal35_3.9.3+dfsg-1build1_arm64.deb ...
216s Unpacking libgdal35:arm64 (3.9.3+dfsg-1build1) ...
216s Selecting previously unselected package libgomp1:arm64.
216s Preparing to unpack .../071-libgomp1_14.2.0-8ubuntu1_arm64.deb ...
216s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ...
216s Selecting previously unselected package libgraphite2-3:arm64.
216s Preparing to unpack .../072-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ...
216s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
216s Selecting previously unselected package libharfbuzz0b:arm64.
216s Preparing to unpack .../073-libharfbuzz0b_10.0.1-1_arm64.deb ...
216s Unpacking libharfbuzz0b:arm64 (10.0.1-1) ...
216s Selecting previously unselected package x11-common.
216s Preparing to unpack .../074-x11-common_1%3a7.7+23ubuntu3_all.deb ...
216s Unpacking x11-common (1:7.7+23ubuntu3) ...
216s Selecting previously unselected package libice6:arm64.
216s Preparing to unpack .../075-libice6_2%3a1.1.1-1_arm64.deb ...
216s Unpacking libice6:arm64 (2:1.1.1-1) ...
216s Selecting previously unselected package libjs-bootstrap.
216s Preparing to unpack .../076-libjs-bootstrap_3.4.1+dfsg-3_all.deb ...
216s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
216s Selecting previously unselected package libthai-data.
216s Preparing to unpack .../077-libthai-data_0.1.29-2build1_all.deb ...
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216s Selecting previously unselected package libthai0:arm64.
216s Preparing to unpack .../078-libthai0_0.1.29-2build1_arm64.deb ...
216s Unpacking libthai0:arm64 (0.1.29-2build1) ...
216s Selecting previously unselected package libpango-1.0-0:arm64.
216s Preparing to unpack .../079-libpango-1.0-0_1.54.0+ds-3_arm64.deb ...
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216s Selecting previously unselected package libpangoft2-1.0-0:arm64.
216s Preparing to unpack .../080-libpangoft2-1.0-0_1.54.0+ds-3_arm64.deb ...
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216s Selecting previously unselected package libpangocairo-1.0-0:arm64.
216s Preparing to unpack .../081-libpangocairo-1.0-0_1.54.0+ds-3_arm64.deb ...
216s Unpacking libpangocairo-1.0-0:arm64 (1.54.0+ds-3) ...
216s Selecting previously unselected package libpaper1:arm64.
216s Preparing to unpack .../082-libpaper1_1.1.29build1_arm64.deb ...
216s Unpacking libpaper1:arm64 (1.1.29build1) ...
216s Selecting previously unselected package libpaper-utils.
216s Preparing to unpack .../083-libpaper-utils_1.1.29build1_arm64.deb ...
216s Unpacking libpaper-utils (1.1.29build1) ...
216s Selecting previously unselected package libsm6:arm64.
216s Preparing to unpack .../084-libsm6_2%3a1.2.4-1_arm64.deb ...
216s Unpacking libsm6:arm64 (2:1.2.4-1) ...
216s Selecting previously unselected package libtcl8.6:arm64.
216s Preparing to unpack .../085-libtcl8.6_8.6.15+dfsg-2_arm64.deb ...
216s Unpacking libtcl8.6:arm64 (8.6.15+dfsg-2) ...
216s Selecting previously unselected package libxft2:arm64.
216s Preparing to unpack .../086-libxft2_2.3.6-1build1_arm64.deb ...
216s Unpacking libxft2:arm64 (2.3.6-1build1) ...
216s Selecting previously unselected package libxss1:arm64.
216s Preparing to unpack .../087-libxss1_1%3a1.2.3-1build3_arm64.deb ...
216s Unpacking libxss1:arm64 (1:1.2.3-1build3) ...
216s Selecting previously unselected package libtk8.6:arm64.
216s Preparing to unpack .../088-libtk8.6_8.6.15-1_arm64.deb ...
216s Unpacking libtk8.6:arm64 (8.6.15-1) ...
216s Selecting previously unselected package libudunits2-data.
216s Preparing to unpack .../089-libudunits2-data_2.2.28-7build1_all.deb ...
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216s Selecting previously unselected package libudunits2-0.
216s Preparing to unpack .../090-libudunits2-0_2.2.28-7build1_arm64.deb ...
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217s Selecting previously unselected package libxt6t64:arm64.
217s Preparing to unpack .../091-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ...
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217s Selecting previously unselected package zip.
217s Preparing to unpack .../092-zip_3.0-14ubuntu1_arm64.deb ...
217s Unpacking zip (3.0-14ubuntu1) ...
217s Selecting previously unselected package unzip.
217s Preparing to unpack .../093-unzip_6.0-28ubuntu6_arm64.deb ...
217s Unpacking unzip (6.0-28ubuntu6) ...
217s Selecting previously unselected package xdg-utils.
217s Preparing to unpack .../094-xdg-utils_1.2.1-0ubuntu1_all.deb ...
217s Unpacking xdg-utils (1.2.1-0ubuntu1) ...
217s Selecting previously unselected package r-base-core.
217s Preparing to unpack .../095-r-base-core_4.4.2-1_arm64.deb ...
217s Unpacking r-base-core (4.4.2-1) ...
217s Selecting previously unselected package r-cran-littler.
217s Preparing to unpack .../096-r-cran-littler_0.3.20-1_arm64.deb ...
217s Unpacking r-cran-littler (0.3.20-1) ...
217s Selecting previously unselected package littler.
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217s Unpacking littler (0.3.20-1) ...
217s Selecting previously unselected package node-html5shiv.
217s Preparing to unpack .../098-node-html5shiv_3.7.3+dfsg-5_all.deb ...
217s Unpacking node-html5shiv (3.7.3+dfsg-5) ...
217s Selecting previously unselected package r-cran-sys.
217s Preparing to unpack .../099-r-cran-sys_3.4.3-1_arm64.deb ...
217s Unpacking r-cran-sys (3.4.3-1) ...
217s Selecting previously unselected package r-cran-askpass.
217s Preparing to unpack .../100-r-cran-askpass_1.2.1-1_arm64.deb ...
217s Unpacking r-cran-askpass (1.2.1-1) ...
217s Selecting previously unselected package r-cran-brio.
217s Preparing to unpack .../101-r-cran-brio_1.1.5-1_arm64.deb ...
217s Unpacking r-cran-brio (1.1.5-1) ...
217s Selecting previously unselected package r-cran-ps.
217s Preparing to unpack .../102-r-cran-ps_1.8.0-1_arm64.deb ...
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217s Selecting previously unselected package r-cran-r6.
217s Preparing to unpack .../103-r-cran-r6_2.5.1-1_all.deb ...
217s Unpacking r-cran-r6 (2.5.1-1) ...
217s Selecting previously unselected package r-cran-processx.
217s Preparing to unpack .../104-r-cran-processx_3.8.4-1_arm64.deb ...
217s Unpacking r-cran-processx (3.8.4-1) ...
217s Selecting previously unselected package r-cran-callr.
217s Preparing to unpack .../105-r-cran-callr_3.7.6-1_all.deb ...
217s Unpacking r-cran-callr (3.7.6-1) ...
217s Selecting previously unselected package r-cran-mass.
217s Preparing to unpack .../106-r-cran-mass_7.3-61-1_arm64.deb ...
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217s Selecting previously unselected package r-cran-class.
217s Preparing to unpack .../107-r-cran-class_7.3-22-2build1_arm64.deb ...
217s Unpacking r-cran-class (7.3-22-2build1) ...
217s Selecting previously unselected package r-cran-proxy.
217s Preparing to unpack .../108-r-cran-proxy_0.4-27-1_arm64.deb ...
217s Unpacking r-cran-proxy (0.4-27-1) ...
218s Selecting previously unselected package r-cran-e1071.
218s Preparing to unpack .../109-r-cran-e1071_1.7-16-1_arm64.deb ...
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218s Selecting previously unselected package r-cran-kernsmooth.
218s Preparing to unpack .../110-r-cran-kernsmooth_2.23-24-1_arm64.deb ...
218s Unpacking r-cran-kernsmooth (2.23-24-1) ...
218s Selecting previously unselected package r-cran-classint.
218s Preparing to unpack .../111-r-cran-classint_0.4-10+dfsg-1_arm64.deb ...
218s Unpacking r-cran-classint (0.4-10+dfsg-1) ...
218s Selecting previously unselected package r-cran-cli.
218s Preparing to unpack .../112-r-cran-cli_3.6.3-1_arm64.deb ...
218s Unpacking r-cran-cli (3.6.3-1) ...
218s Selecting previously unselected package r-cran-digest.
218s Preparing to unpack .../113-r-cran-digest_0.6.37-1_arm64.deb ...
218s Unpacking r-cran-digest (0.6.37-1) ...
218s Selecting previously unselected package r-cran-jsonlite.
218s Preparing to unpack .../114-r-cran-jsonlite_1.8.9+dfsg-1_arm64.deb ...
218s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ...
218s Selecting previously unselected package r-cran-lazyeval.
218s Preparing to unpack .../115-r-cran-lazyeval_0.2.2-1build1_arm64.deb ...
218s Unpacking r-cran-lazyeval (0.2.2-1build1) ...
218s Selecting previously unselected package r-cran-rex.
218s Preparing to unpack .../116-r-cran-rex_1.2.1-1_all.deb ...
218s Unpacking r-cran-rex (1.2.1-1) ...
218s Selecting previously unselected package r-cran-curl.
218s Preparing to unpack .../117-r-cran-curl_5.2.1+dfsg-1_arm64.deb ...
218s Unpacking r-cran-curl (5.2.1+dfsg-1) ...
218s Selecting previously unselected package r-cran-mime.
218s Preparing to unpack .../118-r-cran-mime_0.12-2_arm64.deb ...
218s Unpacking r-cran-mime (0.12-2) ...
218s Selecting previously unselected package r-cran-openssl.
218s Preparing to unpack .../119-r-cran-openssl_2.2.0+dfsg-1_arm64.deb ...
218s Unpacking r-cran-openssl (2.2.0+dfsg-1) ...
218s Selecting previously unselected package r-cran-httr.
218s Preparing to unpack .../120-r-cran-httr_1.4.7+dfsg-1_all.deb ...
218s Unpacking r-cran-httr (1.4.7+dfsg-1) ...
218s Selecting previously unselected package r-cran-crayon.
218s Preparing to unpack .../121-r-cran-crayon_1.5.2-1_all.deb ...
218s Unpacking r-cran-crayon (1.5.2-1) ...
218s Selecting previously unselected package r-cran-withr.
218s Preparing to unpack .../122-r-cran-withr_3.0.2+dfsg-1_all.deb ...
218s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
218s Selecting previously unselected package r-cran-yaml.
218s Preparing to unpack .../123-r-cran-yaml_2.3.10-1_arm64.deb ...
218s Unpacking r-cran-yaml (2.3.10-1) ...
218s Selecting previously unselected package r-cran-covr.
218s Preparing to unpack .../124-r-cran-covr_3.6.4+dfsg-1_arm64.deb ...
218s Unpacking r-cran-covr (3.6.4+dfsg-1) ...
218s Selecting previously unselected package r-cran-dbi.
218s Preparing to unpack .../125-r-cran-dbi_1.2.3-1_all.deb ...
218s Unpacking r-cran-dbi (1.2.3-1) ...
218s Selecting previously unselected package r-cran-desc.
218s Preparing to unpack .../126-r-cran-desc_1.4.3-1_all.deb ...
218s Unpacking r-cran-desc (1.4.3-1) ...
218s Selecting previously unselected package r-cran-diffobj.
218s Preparing to unpack .../127-r-cran-diffobj_0.3.5-1_arm64.deb ...
218s Unpacking r-cran-diffobj (0.3.5-1) ...
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224s Processing triggers for install-info (7.1.1-1) ...
233s (Reading database ... 89121 files and directories currently installed.)
233s Removing autopkgtest-satdep (0) ...
234s autopkgtest [20:44:32]: test run-unit-test: [-----------------------
234s BEGIN TEST azimuth.R
234s 
234s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
234s Copyright (C) 2024 The R Foundation for Statistical Computing
234s Platform: aarch64-unknown-linux-gnu
234s 
234s R is free software and comes with ABSOLUTELY NO WARRANTY.
234s You are welcome to redistribute it under certain conditions.
234s Type 'license()' or 'licence()' for distribution details.
234s 
234s R is a collaborative project with many contributors.
234s Type 'contributors()' for more information and
234s 'citation()' on how to cite R or R packages in publications.
234s 
234s Type 'demo()' for some demos, 'help()' for on-line help, or
234s 'help.start()' for an HTML browser interface to help.
234s Type 'q()' to quit R.
234s 
235s > suppressPackageStartupMessages(library(sf))
235s > suppressPackageStartupMessages(library(lwgeom))
235s > p = st_sfc(st_point(c(7,52)), st_point(c(8,53)), crs = 4326)
235s Warning messages:
235s 1: In fun(libname, pkgname) :
235s   GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2
235s 2: In fun(libname, pkgname) :
235s   PROJ versions differ: lwgeom has 9.4.0 sf has 9.4.1
235s > st_geod_azimuth(p)
235s 0.5410385 [rad]
235s > 
235s BEGIN TEST dist.R
235s 
235s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
235s Copyright (C) 2024 The R Foundation for Statistical Computing
235s Platform: aarch64-unknown-linux-gnu
235s 
235s R is free software and comes with ABSOLUTELY NO WARRANTY.
235s You are welcome to redistribute it under certain conditions.
235s Type 'license()' or 'licence()' for distribution details.
235s 
235s R is a collaborative project with many contributors.
235s Type 'contributors()' for more information and
235s 'citation()' on how to cite R or R packages in publications.
235s 
235s Type 'demo()' for some demos, 'help()' for on-line help, or
235s 'help.start()' for an HTML browser interface to help.
235s Type 'q()' to quit R.
235s 
235s > suppressPackageStartupMessages(library(sf))
236s > library(sp)
236s > suppressPackageStartupMessages(library(units))
236s > library(geosphere)
236s > 
236s > x = st_sfc(
236s + st_point(c(0,0)),
236s + st_point(c(1,0)),
236s + st_point(c(2,0)),
236s + st_point(c(3,0)),
236s + crs = 4326
236s + )
236s > 
236s > y = st_sfc(
236s + st_point(c(0,10)),
236s + st_point(c(1,0)),
236s + st_point(c(2,0)),
236s + st_point(c(3,0)),
236s + st_point(c(4,0)),
236s + crs = 4326
236s + )
236s > 
236s > st_crs(y) = 4326
236s > st_crs(x) = 4326
236s > sf_use_s2(FALSE)
236s > (d.sf = st_distance(x, y))
236s Spherical geometry (s2) switched off
236s Units: [m]
236s         [,1]     [,2]     [,3]     [,4]     [,5]
236s [1,] 1105855 111319.5 222639.0 333958.5 445278.0
236s [2,] 1111387      0.0 111319.5 222639.0 333958.5
236s [3,] 1127822 111319.5      0.0 111319.5 222639.0
236s [4,] 1154693 222639.0 111319.5      0.0 111319.5
236s > 
236s BEGIN TEST geod.R
236s 
236s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
236s Copyright (C) 2024 The R Foundation for Statistical Computing
236s Platform: aarch64-unknown-linux-gnu
236s 
236s R is free software and comes with ABSOLUTELY NO WARRANTY.
236s You are welcome to redistribute it under certain conditions.
236s Type 'license()' or 'licence()' for distribution details.
236s 
236s R is a collaborative project with many contributors.
236s Type 'contributors()' for more information and
236s 'citation()' on how to cite R or R packages in publications.
236s 
236s Type 'demo()' for some demos, 'help()' for on-line help, or
236s 'help.start()' for an HTML browser interface to help.
236s Type 'q()' to quit R.
236s 
236s > ### Name: lw_geodetic
236s > ### Title: geodetic length, area, and predicates
236s > ### Aliases: lw_geodetic st_geod_area lw_geodetic st_geod_length
236s > ###   lw_geodetic st_geod_segmentize lw_geodetic st_geod_covers
236s > 
236s > ### ** Examples
236s > 
236s > suppressPackageStartupMessages(library(sf))
236s > suppressPackageStartupMessages(library(lwgeom))
236s > suppressPackageStartupMessages(library(units))
236s Warning messages:
236s 1: In fun(libname, pkgname) :
236s   GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2
236s 2: In fun(libname, pkgname) :
236s   PROJ versions differ: lwgeom has 9.4.0 sf has 9.4.1
236s > nc = st_read(system.file("gpkg/nc.gpkg", package="sf"), quiet = TRUE)
236s > st_geod_area(nc[1:3,])
236s Units: [m^2]
236s [1] 1137388604  611077263 1423489919
236s > # st_area(nc[1:3,])
236s > l = st_sfc(st_linestring(rbind(c(7,52), c(8,53))), crs = 4326)
236s > st_geod_length(l)
236s 130359.3 [m]
236s > pol = st_polygon(list(rbind(c(0,0), c(0,60), c(60,60), c(0,0))))
236s > x = st_sfc(pol, crs = 4326)
236s > seg = st_geod_segmentize(x[1], set_units(10, km))
236s > plot(seg, graticule = TRUE, axes = TRUE)
237s > pole = st_polygon(list(rbind(c(0,80), c(120,80), c(240,80), c(0,80))))
237s > pt = st_point(c(0,90))
237s > x = st_sfc(pole, pt, crs = 4326)
237s > st_geod_covers(x[c(1,1,1)], x[c(2,2,2,2)])
237s Sparse geometry binary predicate list of length 3, where the predicate
237s was `covers'
237s  1: 1, 2, 3, 4
237s  2: 1, 2, 3, 4
237s  3: 1, 2, 3, 4
237s > st_geod_covered_by(x[c(2,2)], x[c(1,1,1)])
237s Sparse geometry binary predicate list of length 2, where the predicate
237s was `covered_by'
237s  1: 1, 2, 3
237s  2: 1, 2, 3
237s > st_geod_covers(x[c(1,1,1)], x[c(2,2,2,2)], sparse = FALSE)
237s      [,1] [,2] [,3] [,4]
237s [1,] TRUE TRUE TRUE TRUE
237s [2,] TRUE TRUE TRUE TRUE
237s [3,] TRUE TRUE TRUE TRUE
237s > st_geod_covered_by(x[c(2,2)], x[c(1,1,1)], sparse = FALSE)
237s      [,1] [,2] [,3]
237s [1,] TRUE TRUE TRUE
237s [2,] TRUE TRUE TRUE
237s > 
237s > # box crossing the dateline:
237s > #box = st_polygon(list(rbind(c(179.5,0), c(179.5,1), c(-179.5,1), c(-179.5,0), c(179.5,0))))
237s > box = st_polygon(list(rbind(c(179.5,0.1), c(179.5,1), c(-179.5,1), c(-179.5,0.1), c(179.5,0.1))))
237s > b = st_sfc(box, crs = 4326)
237s > units::set_units(st_geod_area(b), km^2) # approx 111^2
237s 11077.84 [km^2]
237s > 
237s > pt = st_point(c(30, 70))
237s > x = st_sfc(pole, pt, pt, crs = 4326)
237s > st_geod_distance(x, x)
237s Units: [m]
237s         [,1]    [,2]    [,3]
237s [1,]       0 1378923 1378923
237s [2,] 1378923       0       0
237s [3,] 1378923       0       0
237s > st_geod_distance(x, x, sparse = TRUE)
237s Sparse geometry binary predicate list of length 3, where the predicate
237s was `st_is_within_distance'
237s  1: 1
237s  2: 2, 3
237s  3: 2, 3
237s > st_geod_distance(x, x, tolerance = 1, sparse = TRUE)
237s Sparse geometry binary predicate list of length 3, where the predicate
237s was `st_is_within_distance'
237s  1: 1
237s  2: 2, 3
237s  3: 2, 3
237s > 
237s BEGIN TEST perimeter.R
237s 
237s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
237s Copyright (C) 2024 The R Foundation for Statistical Computing
237s Platform: aarch64-unknown-linux-gnu
237s 
237s R is free software and comes with ABSOLUTELY NO WARRANTY.
237s You are welcome to redistribute it under certain conditions.
237s Type 'license()' or 'licence()' for distribution details.
237s 
237s R is a collaborative project with many contributors.
237s Type 'contributors()' for more information and
237s 'citation()' on how to cite R or R packages in publications.
237s 
237s Type 'demo()' for some demos, 'help()' for on-line help, or
237s 'help.start()' for an HTML browser interface to help.
237s Type 'q()' to quit R.
237s 
237s > suppressPackageStartupMessages(library(lwgeom))
237s Warning messages:
237s 1: In fun(libname, pkgname) :
237s   GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2
237s 2: In fun(libname, pkgname) :
237s   PROJ versions differ: lwgeom has 9.4.0 sf has 9.4.1
237s > suppressPackageStartupMessages(library(sf))
237s > nc = st_read(system.file("gpkg/nc.gpkg", package="sf"), quiet = TRUE)
237s > nc = st_transform(nc, 3857)
237s > st_perimeter(nc)[1:5]
237s Error: 'st_perimeter_lwgeom' is not an exported object from 'namespace:lwgeom'
237s Execution halted
238s autopkgtest [20:44:36]: test run-unit-test: -----------------------]
238s run-unit-test        FAIL non-zero exit status 1
238s autopkgtest [20:44:36]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
238s autopkgtest [20:44:36]: test pkg-r-autopkgtest: preparing testbed
242s Reading package lists...
242s Building dependency tree...
242s Reading state information...
243s Starting pkgProblemResolver with broken count: 0
243s Starting 2 pkgProblemResolver with broken count: 0
243s Done
243s The following additional packages will be installed:
243s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
243s   dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
243s   gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14
243s   gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools
243s   libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
243s   libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev
243s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3
243s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
243s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
243s   libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev
243s   zlib1g-dev
244s Suggested packages:
244s   cpp-doc gcc-14-locales cpp-14-doc debtags gcc-14-doc gcc-multilib
244s   manpages-dev autoconf automake libtool flex bison gdb gcc-doc
244s   gdb-aarch64-linux-gnu gfortran-doc gfortran-14-doc libcoarrays-dev
244s   liblapack-doc icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-14-doc
244s   texlive-base texlive-latex-base texlive-plain-generic
244s   texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
244s   texlive-latex-recommended texlive-latex-extra texinfo
244s Recommended packages:
244s   bzip2-doc libpng-tools
244s The following NEW packages will be installed:
244s   autopkgtest-satdep build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu
244s   cpp-aarch64-linux-gnu dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu
244s   g++-aarch64-linux-gnu gcc gcc-14 gcc-14-aarch64-linux-gnu
244s   gcc-aarch64-linux-gnu gfortran gfortran-14 gfortran-14-aarch64-linux-gnu
244s   gfortran-aarch64-linux-gnu icu-devtools libasan8 libblas-dev libbz2-dev
244s   libcc1-0 libdeflate-dev libgcc-14-dev libgfortran-14-dev libhwasan0
244s   libicu-dev libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev
244s   liblapack-dev liblsan0 liblzma-dev libmpc3 libncurses-dev libpcre2-16-0
244s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev
244s   libreadline-dev libstdc++-14-dev libtirpc-dev libtsan2 libubsan1
244s   pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
244s 0 upgraded, 55 newly installed, 0 to remove and 0 not upgraded.
244s Need to get 92.0 MB/92.0 MB of archives.
244s After this operation, 331 MB of additional disk space will be used.
244s Get:1 /tmp/autopkgtest.ZW5IGF/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [744 B]
244s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
244s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
244s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [10.6 MB]
245s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-8ubuntu1 [1028 B]
245s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B]
245s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB]
245s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-8ubuntu1 [49.7 kB]
245s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-8ubuntu1 [27.8 kB]
245s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-8ubuntu1 [2893 kB]
245s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-8ubuntu1 [1283 kB]
245s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-8ubuntu1 [2686 kB]
245s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-8ubuntu1 [1151 kB]
245s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-8ubuntu1 [1598 kB]
245s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-8ubuntu1 [2594 kB]
245s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [20.9 MB]
246s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-8ubuntu1 [518 kB]
246s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B]
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246s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-8ubuntu1 [2476 kB]
246s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [12.1 MB]
246s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-8ubuntu1 [19.9 kB]
246s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B]
246s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B]
246s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
246s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB]
246s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-8ubuntu1 [498 kB]
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247s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 74.2-1ubuntu4 [210 kB]
247s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.0-3build2 [120 kB]
247s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB]
247s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.22-1 [53.8 kB]
247s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 74.2-1ubuntu4 [11.9 MB]
247s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB]
247s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
247s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
247s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.0-3build2 [4419 kB]
248s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5-2 [385 kB]
248s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB]
248s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu3 [187 kB]
248s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu3 [6704 B]
248s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.42-4ubuntu3 [694 kB]
248s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB]
248s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
248s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.44-2 [270 kB]
248s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-5 [179 kB]
248s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.2-2 [179 kB]
248s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB]
248s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB]
248s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB]
248s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.2-1 [4340 B]
248s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
248s Fetched 92.0 MB in 4s (22.2 MB/s)
248s Selecting previously unselected package libisl23:arm64.
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256s (Reading database ... 91104 files and directories currently installed.)
256s Removing autopkgtest-satdep (0) ...
257s autopkgtest [20:44:55]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
257s autopkgtest [20:44:55]: test pkg-r-autopkgtest: [-----------------------
257s Test: Try to load the R library lwgeom
257s 
257s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
257s Copyright (C) 2024 The R Foundation for Statistical Computing
257s Platform: aarch64-unknown-linux-gnu
257s 
257s R is free software and comes with ABSOLUTELY NO WARRANTY.
257s You are welcome to redistribute it under certain conditions.
257s Type 'license()' or 'licence()' for distribution details.
257s 
257s R is a collaborative project with many contributors.
257s Type 'contributors()' for more information and
257s 'citation()' on how to cite R or R packages in publications.
257s 
257s Type 'demo()' for some demos, 'help()' for on-line help, or
257s 'help.start()' for an HTML browser interface to help.
257s Type 'q()' to quit R.
257s 
257s > library('lwgeom')
258s Linking to liblwgeom 3.0.0beta1 r16016, GEOS 3.12.1, PROJ 9.4.0
258s > 
258s > 
258s Warning messages:
258s 1: In fun(libname, pkgname) :
258s   GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2
258s 2: In fun(libname, pkgname) :
258s   PROJ versions differ: lwgeom has 9.4.0 sf has 9.4.1
258s Other tests are currently unsupported!
258s They will be progressively added.
258s autopkgtest [20:44:56]: test pkg-r-autopkgtest: -----------------------]
258s autopkgtest [20:44:56]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
258s pkg-r-autopkgtest    PASS
259s autopkgtest [20:44:57]: @@@@@@@@@@@@@@@@@@@@ summary
259s run-unit-test        FAIL non-zero exit status 1
259s pkg-r-autopkgtest    PASS
270s nova [W] Skipping flock in bos03-arm64
270s Creating nova instance adt-plucky-arm64-r-cran-lwgeom-20241123-204038-juju-7f2275-prod-proposed-migration-environment-20-6cc3afaf-9791-4b9f-a149-e972cd8804a9 from image adt/ubuntu-plucky-arm64-server-20241119.img (UUID 254dc414-4366-404b-b85c-a4e26b3194ad)...