0s autopkgtest [15:34:09]: starting date and time: 2025-03-15 15:34:09+0000
  0s autopkgtest [15:34:09]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [15:34:09]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.xpiunb4j/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-isospecr --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-37.secgroup --name adt-plucky-arm64-r-cran-isospecr-20250315-153409-juju-7f2275-prod-proposed-migration-environment-2-1aa5be00-e2e8-482e-bc56-6a6dbedb3cc2 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
142s autopkgtest [15:36:31]: testbed dpkg architecture: arm64
143s autopkgtest [15:36:32]: testbed apt version: 2.9.33
143s autopkgtest [15:36:32]: @@@@@@@@@@@@@@@@@@@@ test bed setup
143s autopkgtest [15:36:32]: testbed release detected to be: None
144s autopkgtest [15:36:33]: updating testbed package index (apt update)
145s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
145s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
145s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
145s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
145s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB]
146s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB]
146s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
146s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [78.2 kB]
146s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1976 B]
146s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B]
146s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [346 kB]
146s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [15.8 kB]
146s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B]
146s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [572 B]
146s Fetched 1094 kB in 2s (608 kB/s)
147s Reading package lists...
148s Reading package lists...
148s Building dependency tree...
148s Reading state information...
149s Calculating upgrade...
149s Calculating upgrade...
149s The following packages will be upgraded:
149s   python3-jinja2 strace
149s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
149s Need to get 608 kB of archives.
149s After this operation, 11.3 kB of additional disk space will be used.
149s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB]
150s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
151s Fetched 608 kB in 1s (620 kB/s)
151s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 117701 files and directories currently installed.)
151s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ...
151s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
151s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
151s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
151s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
151s Setting up strace (6.13+ds-1ubuntu1) ...
151s Processing triggers for man-db (2.13.0-1) ...
152s Reading package lists...
152s Building dependency tree...
152s Reading state information...
153s Solving dependencies...
153s The following packages will be REMOVED:
153s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
153s   libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
153s   linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic*
153s   linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic*
153s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded.
153s After this operation, 267 MB disk space will be freed.
153s (Reading database ... 
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(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 117701 files and directories currently installed.)
153s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
153s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
153s Removing libpython3.12t64:arm64 (3.12.9-1) ...
153s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ...
153s Removing libnsl2:arm64 (1.3.0-3build3) ...
153s Removing libpython3.12-minimal:arm64 (3.12.9-1) ...
154s Removing libunwind8:arm64 (1.6.2-3.1) ...
154s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
154s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
156s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ...
156s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic
156s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic
156s /etc/kernel/postrm.d/initramfs-tools:
156s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic
156s /etc/kernel/postrm.d/zz-flash-kernel:
156s flash-kernel: Kernel 6.11.0-8-generic has been removed.
156s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required.
156s /etc/kernel/postrm.d/zz-update-grub:
156s Sourcing file `/etc/default/grub'
156s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
156s Generating grub configuration file ...
156s Found linux image: /boot/vmlinuz-6.14.0-10-generic
156s Found initrd image: /boot/initrd.img-6.14.0-10-generic
157s Warning: os-prober will not be executed to detect other bootable partitions.
157s Systems on them will not be added to the GRUB boot configuration.
157s Check GRUB_DISABLE_OS_PROBER documentation entry.
157s Adding boot menu entry for UEFI Firmware Settings ...
157s done
157s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
157s Processing triggers for libc-bin (2.41-1ubuntu1) ...
157s (Reading database ... 
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(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81650 files and directories currently installed.)
157s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ...
157s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ...
157s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
157s autopkgtest [15:36:46]: upgrading testbed (apt dist-upgrade and autopurge)
158s Reading package lists...
158s Building dependency tree...
158s Reading state information...
158s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
158s Starting 2 pkgProblemResolver with broken count: 0
158s Done
159s Entering ResolveByKeep
159s 
159s Calculating upgrade...
160s The following packages will be upgraded:
160s   libc-bin libc-dev-bin libc6 libc6-dev locales
160s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
160s Need to get 9530 kB of archives.
160s After this operation, 0 B of additional disk space will be used.
160s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB]
162s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB]
162s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB]
165s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB]
166s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB]
171s Preconfiguring packages ...
171s Fetched 9530 kB in 11s (898 kB/s)
171s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
171s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ...
171s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
171s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ...
171s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
171s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ...
171s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
171s Setting up libc6:arm64 (2.41-1ubuntu2) ...
172s (Reading database ... 
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
172s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ...
172s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
172s Setting up libc-bin (2.41-1ubuntu2) ...
172s (Reading database ... 
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(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
172s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
172s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
172s Setting up locales (2.41-1ubuntu2) ...
173s Generating locales (this might take a while)...
175s   en_US.UTF-8... done
175s Generation complete.
175s Setting up libc-dev-bin (2.41-1ubuntu2) ...
175s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ...
175s Processing triggers for man-db (2.13.0-1) ...
176s Processing triggers for systemd (257.3-1ubuntu3) ...
177s Reading package lists...
177s Building dependency tree...
177s Reading state information...
177s Starting pkgProblemResolver with broken count: 0
177s Starting 2 pkgProblemResolver with broken count: 0
177s Done
178s Solving dependencies...
178s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
178s autopkgtest [15:37:07]: rebooting testbed after setup commands that affected boot
202s autopkgtest [15:37:31]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025
204s autopkgtest [15:37:33]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-isospecr
207s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-isospecr 2.1.3-1 (dsc) [2177 B]
207s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-isospecr 2.1.3-1 (tar) [366 kB]
207s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-isospecr 2.1.3-1 (diff) [3520 B]
207s gpgv: Signature made Fri Nov  6 10:31:42 2020 UTC
207s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
207s gpgv:                issuer "tille@debian.org"
207s gpgv: Can't check signature: No public key
207s dpkg-source: warning: cannot verify inline signature for ./r-cran-isospecr_2.1.3-1.dsc: no acceptable signature found
207s autopkgtest [15:37:36]: testing package r-cran-isospecr version 2.1.3-1
208s autopkgtest [15:37:37]: build not needed
210s autopkgtest [15:37:39]: test run-unit-test: preparing testbed
210s Reading package lists...
211s Building dependency tree...
211s Reading state information...
211s Starting pkgProblemResolver with broken count: 0
211s Starting 2 pkgProblemResolver with broken count: 0
211s Done
212s The following NEW packages will be installed:
212s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
212s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1
212s   libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8
212s   liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
212s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
212s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
212s   libxft2 libxrender1 libxss1 libxt6t64 littler r-base-core r-cran-brio
212s   r-cran-callr r-cran-cli r-cran-crayon r-cran-desc r-cran-diffobj
212s   r-cran-digest r-cran-evaluate r-cran-fs r-cran-glue r-cran-isospecr
212s   r-cran-jsonlite r-cran-lifecycle r-cran-littler r-cran-magrittr
212s   r-cran-pkgbuild r-cran-pkgkitten r-cran-pkgload r-cran-praise
212s   r-cran-processx r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rlang
212s   r-cran-rprojroot r-cran-testthat r-cran-waldo r-cran-withr unzip x11-common
212s   xdg-utils zip
212s 0 upgraded, 73 newly installed, 0 to remove and 0 not upgraded.
212s Need to get 51.0 MB of archives.
212s After this operation, 107 MB of additional disk space will be used.
212s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
213s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
214s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB]
214s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB]
214s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB]
215s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB]
215s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
215s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
215s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
215s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
215s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
216s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
216s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB]
216s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB]
216s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB]
216s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
216s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB]
217s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
217s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
217s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
217s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
217s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB]
220s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
220s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
220s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
220s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB]
220s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB]
221s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB]
221s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB]
221s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB]
221s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB]
221s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
221s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB]
222s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
222s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB]
222s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
222s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
222s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
222s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB]
223s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
224s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB]
224s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
224s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
224s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB]
258s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB]
258s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B]
258s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB]
258s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB]
259s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB]
259s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB]
259s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB]
260s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB]
261s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB]
261s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB]
262s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB]
263s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB]
264s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB]
264s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB]
264s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB]
264s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
264s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB]
266s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isospecr arm64 2.1.3-1 [385 kB]
267s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB]
267s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB]
269s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
269s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
269s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB]
270s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB]
270s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
270s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB]
270s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB]
270s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-2 [150 kB]
270s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB]
273s Preconfiguring packages ...
273s Fetched 51.0 MB in 60s (846 kB/s)
273s Selecting previously unselected package fonts-dejavu-mono.
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273s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ...
273s Unpacking fonts-dejavu-mono (2.37-8) ...
273s Selecting previously unselected package fonts-dejavu-core.
273s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ...
273s Unpacking fonts-dejavu-core (2.37-8) ...
273s Selecting previously unselected package fontconfig-config.
273s Preparing to unpack .../02-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ...
273s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
273s Selecting previously unselected package libfontconfig1:arm64.
273s Preparing to unpack .../03-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ...
273s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ...
273s Selecting previously unselected package fontconfig.
273s Preparing to unpack .../04-fontconfig_2.15.0-2ubuntu1_arm64.deb ...
273s Unpacking fontconfig (2.15.0-2ubuntu1) ...
273s Selecting previously unselected package libblas3:arm64.
273s Preparing to unpack .../05-libblas3_3.12.1-2_arm64.deb ...
273s Unpacking libblas3:arm64 (3.12.1-2) ...
273s Selecting previously unselected package libpixman-1-0:arm64.
273s Preparing to unpack .../06-libpixman-1-0_0.44.0-3_arm64.deb ...
273s Unpacking libpixman-1-0:arm64 (0.44.0-3) ...
274s Selecting previously unselected package libxcb-render0:arm64.
274s Preparing to unpack .../07-libxcb-render0_1.17.0-2_arm64.deb ...
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274s Selecting previously unselected package libxcb-shm0:arm64.
274s Preparing to unpack .../08-libxcb-shm0_1.17.0-2_arm64.deb ...
274s Unpacking libxcb-shm0:arm64 (1.17.0-2) ...
274s Selecting previously unselected package libxrender1:arm64.
274s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ...
274s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ...
274s Selecting previously unselected package libcairo2:arm64.
274s Preparing to unpack .../10-libcairo2_1.18.2-2_arm64.deb ...
274s Unpacking libcairo2:arm64 (1.18.2-2) ...
274s Selecting previously unselected package libdatrie1:arm64.
274s Preparing to unpack .../11-libdatrie1_0.2.13-3build1_arm64.deb ...
274s Unpacking libdatrie1:arm64 (0.2.13-3build1) ...
274s Selecting previously unselected package libdeflate0:arm64.
274s Preparing to unpack .../12-libdeflate0_1.23-1_arm64.deb ...
274s Unpacking libdeflate0:arm64 (1.23-1) ...
274s Selecting previously unselected package libgfortran5:arm64.
274s Preparing to unpack .../13-libgfortran5_15-20250222-0ubuntu1_arm64.deb ...
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274s Selecting previously unselected package libgomp1:arm64.
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274s Selecting previously unselected package libgraphite2-3:arm64.
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274s Selecting previously unselected package libharfbuzz0b:arm64.
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274s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu3_all.deb ...
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274s Selecting previously unselected package libice6:arm64.
274s Preparing to unpack .../18-libice6_2%3a1.1.1-1_arm64.deb ...
274s Unpacking libice6:arm64 (2:1.1.1-1) ...
274s Selecting previously unselected package libjpeg-turbo8:arm64.
274s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ...
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274s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_arm64.deb ...
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274s Selecting previously unselected package liblapack3:arm64.
274s Preparing to unpack .../21-liblapack3_3.12.1-2_arm64.deb ...
274s Unpacking liblapack3:arm64 (3.12.1-2) ...
274s Selecting previously unselected package liblerc4:arm64.
274s Preparing to unpack .../22-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ...
274s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
274s Selecting previously unselected package libthai-data.
274s Preparing to unpack .../23-libthai-data_0.1.29-2build1_all.deb ...
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274s Selecting previously unselected package libthai0:arm64.
274s Preparing to unpack .../24-libthai0_0.1.29-2build1_arm64.deb ...
274s Unpacking libthai0:arm64 (0.1.29-2build1) ...
274s Selecting previously unselected package libpango-1.0-0:arm64.
274s Preparing to unpack .../25-libpango-1.0-0_1.56.2-1_arm64.deb ...
274s Unpacking libpango-1.0-0:arm64 (1.56.2-1) ...
274s Selecting previously unselected package libpangoft2-1.0-0:arm64.
274s Preparing to unpack .../26-libpangoft2-1.0-0_1.56.2-1_arm64.deb ...
274s Unpacking libpangoft2-1.0-0:arm64 (1.56.2-1) ...
274s Selecting previously unselected package libpangocairo-1.0-0:arm64.
274s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.2-1_arm64.deb ...
274s Unpacking libpangocairo-1.0-0:arm64 (1.56.2-1) ...
274s Selecting previously unselected package libpaper2:arm64.
274s Preparing to unpack .../28-libpaper2_2.2.5-0.3_arm64.deb ...
274s Unpacking libpaper2:arm64 (2.2.5-0.3) ...
274s Selecting previously unselected package libpaper-utils.
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274s Unpacking libpaper-utils (2.2.5-0.3) ...
274s Selecting previously unselected package libsharpyuv0:arm64.
274s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_arm64.deb ...
274s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ...
274s Selecting previously unselected package libsm6:arm64.
274s Preparing to unpack .../31-libsm6_2%3a1.2.4-1_arm64.deb ...
274s Unpacking libsm6:arm64 (2:1.2.4-1) ...
274s Selecting previously unselected package libtcl8.6:arm64.
274s Preparing to unpack .../32-libtcl8.6_8.6.16+dfsg-1_arm64.deb ...
274s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ...
274s Selecting previously unselected package libjbig0:arm64.
275s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu2_arm64.deb ...
275s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ...
275s Selecting previously unselected package libwebp7:arm64.
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275s Unpacking libwebp7:arm64 (1.5.0-0.1) ...
275s Selecting previously unselected package libtiff6:arm64.
275s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ...
275s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
275s Selecting previously unselected package libxft2:arm64.
275s Preparing to unpack .../36-libxft2_2.3.6-1build1_arm64.deb ...
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275s Selecting previously unselected package libxss1:arm64.
275s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build3_arm64.deb ...
275s Unpacking libxss1:arm64 (1:1.2.3-1build3) ...
275s Selecting previously unselected package libtk8.6:arm64.
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275s Unpacking libtk8.6:arm64 (8.6.16-1) ...
275s Selecting previously unselected package libxt6t64:arm64.
275s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ...
275s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ...
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275s Preparing to unpack .../40-zip_3.0-14ubuntu2_arm64.deb ...
275s Unpacking zip (3.0-14ubuntu2) ...
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275s Preparing to unpack .../41-unzip_6.0-28ubuntu6_arm64.deb ...
275s Unpacking unzip (6.0-28ubuntu6) ...
275s Selecting previously unselected package xdg-utils.
275s Preparing to unpack .../42-xdg-utils_1.2.1-2ubuntu1_all.deb ...
275s Unpacking xdg-utils (1.2.1-2ubuntu1) ...
275s Selecting previously unselected package r-base-core.
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275s Unpacking r-base-core (4.4.3-1) ...
275s Selecting previously unselected package r-cran-littler.
275s Preparing to unpack .../44-r-cran-littler_0.3.20-2_arm64.deb ...
275s Unpacking r-cran-littler (0.3.20-2) ...
275s Selecting previously unselected package littler.
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275s Unpacking littler (0.3.20-2) ...
275s Selecting previously unselected package r-cran-brio.
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275s Unpacking r-cran-brio (1.1.5-1) ...
275s Selecting previously unselected package r-cran-ps.
275s Preparing to unpack .../47-r-cran-ps_1.9.0-1_arm64.deb ...
275s Unpacking r-cran-ps (1.9.0-1) ...
275s Selecting previously unselected package r-cran-r6.
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275s Unpacking r-cran-r6 (2.6.1-1) ...
275s Selecting previously unselected package r-cran-processx.
275s Preparing to unpack .../49-r-cran-processx_3.8.6-1_arm64.deb ...
275s Unpacking r-cran-processx (3.8.6-1) ...
275s Selecting previously unselected package r-cran-callr.
275s Preparing to unpack .../50-r-cran-callr_3.7.6-1_all.deb ...
275s Unpacking r-cran-callr (3.7.6-1) ...
275s Selecting previously unselected package r-cran-cli.
275s Preparing to unpack .../51-r-cran-cli_3.6.4-1_arm64.deb ...
275s Unpacking r-cran-cli (3.6.4-1) ...
276s Selecting previously unselected package r-cran-crayon.
276s Preparing to unpack .../52-r-cran-crayon_1.5.3-1_all.deb ...
276s Unpacking r-cran-crayon (1.5.3-1) ...
276s Selecting previously unselected package r-cran-desc.
276s Preparing to unpack .../53-r-cran-desc_1.4.3-1_all.deb ...
276s Unpacking r-cran-desc (1.4.3-1) ...
276s Selecting previously unselected package r-cran-diffobj.
276s Preparing to unpack .../54-r-cran-diffobj_0.3.5-1_arm64.deb ...
276s Unpacking r-cran-diffobj (0.3.5-1) ...
276s Selecting previously unselected package r-cran-digest.
276s Preparing to unpack .../55-r-cran-digest_0.6.37-1_arm64.deb ...
276s Unpacking r-cran-digest (0.6.37-1) ...
276s Selecting previously unselected package r-cran-evaluate.
276s Preparing to unpack .../56-r-cran-evaluate_1.0.3-1_all.deb ...
276s Unpacking r-cran-evaluate (1.0.3-1) ...
276s Selecting previously unselected package r-cran-fs.
276s Preparing to unpack .../57-r-cran-fs_1.6.5+dfsg-1_arm64.deb ...
276s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
276s Selecting previously unselected package r-cran-glue.
276s Preparing to unpack .../58-r-cran-glue_1.8.0-1_arm64.deb ...
276s Unpacking r-cran-glue (1.8.0-1) ...
276s Selecting previously unselected package r-cran-pkgkitten.
276s Preparing to unpack .../59-r-cran-pkgkitten_0.2.4-1_all.deb ...
276s Unpacking r-cran-pkgkitten (0.2.4-1) ...
276s Selecting previously unselected package r-cran-rcpp.
276s Preparing to unpack .../60-r-cran-rcpp_1.0.14-1_arm64.deb ...
276s Unpacking r-cran-rcpp (1.0.14-1) ...
276s Selecting previously unselected package r-cran-isospecr.
276s Preparing to unpack .../61-r-cran-isospecr_2.1.3-1_arm64.deb ...
276s Unpacking r-cran-isospecr (2.1.3-1) ...
276s Selecting previously unselected package r-cran-jsonlite.
276s Preparing to unpack .../62-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ...
276s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
276s Selecting previously unselected package r-cran-rlang.
276s Preparing to unpack .../63-r-cran-rlang_1.1.5-1_arm64.deb ...
276s Unpacking r-cran-rlang (1.1.5-1) ...
276s Selecting previously unselected package r-cran-lifecycle.
276s Preparing to unpack .../64-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
276s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
276s Selecting previously unselected package r-cran-magrittr.
276s Preparing to unpack .../65-r-cran-magrittr_2.0.3-1_arm64.deb ...
276s Unpacking r-cran-magrittr (2.0.3-1) ...
276s Selecting previously unselected package r-cran-pkgbuild.
276s Preparing to unpack .../66-r-cran-pkgbuild_1.4.6-1_all.deb ...
276s Unpacking r-cran-pkgbuild (1.4.6-1) ...
276s Selecting previously unselected package r-cran-rprojroot.
276s Preparing to unpack .../67-r-cran-rprojroot_2.0.4-2_all.deb ...
276s Unpacking r-cran-rprojroot (2.0.4-2) ...
276s Selecting previously unselected package r-cran-withr.
276s Preparing to unpack .../68-r-cran-withr_3.0.2+dfsg-1_all.deb ...
276s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
276s Selecting previously unselected package r-cran-pkgload.
276s Preparing to unpack .../69-r-cran-pkgload_1.4.0-1_all.deb ...
276s Unpacking r-cran-pkgload (1.4.0-1) ...
276s Selecting previously unselected package r-cran-praise.
276s Preparing to unpack .../70-r-cran-praise_1.0.0-4build1_all.deb ...
276s Unpacking r-cran-praise (1.0.0-4build1) ...
276s Selecting previously unselected package r-cran-waldo.
276s Preparing to unpack .../71-r-cran-waldo_0.6.1-2_all.deb ...
276s Unpacking r-cran-waldo (0.6.1-2) ...
277s Selecting previously unselected package r-cran-testthat.
277s Preparing to unpack .../72-r-cran-testthat_3.2.3-1_arm64.deb ...
277s Unpacking r-cran-testthat (3.2.3-1) ...
277s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
277s Setting up libpixman-1-0:arm64 (0.44.0-3) ...
277s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ...
277s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
277s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ...
277s Setting up libdatrie1:arm64 (0.2.13-3build1) ...
277s Setting up libxcb-render0:arm64 (1.17.0-2) ...
277s Setting up unzip (6.0-28ubuntu6) ...
277s Setting up x11-common (1:7.7+23ubuntu3) ...
277s Setting up libdeflate0:arm64 (1.23-1) ...
277s Setting up libxcb-shm0:arm64 (1.17.0-2) ...
277s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ...
277s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ...
277s Setting up zip (3.0-14ubuntu2) ...
277s Setting up libblas3:arm64 (3.12.1-2) ...
277s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
277s Setting up fonts-dejavu-mono (2.37-8) ...
277s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ...
277s Setting up fonts-dejavu-core (2.37-8) ...
277s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
277s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ...
277s Setting up libwebp7:arm64 (1.5.0-0.1) ...
277s Setting up libharfbuzz0b:arm64 (10.2.0-1) ...
277s Setting up libthai-data (0.1.29-2build1) ...
277s Setting up libxss1:arm64 (1:1.2.3-1build3) ...
277s Setting up libpaper2:arm64 (2.2.5-0.3) ...
277s Setting up xdg-utils (1.2.1-2ubuntu1) ...
277s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
277s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
277s Setting up libice6:arm64 (2:1.1.1-1) ...
277s Setting up liblapack3:arm64 (3.12.1-2) ...
277s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
277s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
277s Setting up libpaper-utils (2.2.5-0.3) ...
277s Setting up libthai0:arm64 (0.1.29-2build1) ...
277s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
277s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ...
277s Setting up libsm6:arm64 (2:1.2.4-1) ...
277s Setting up fontconfig (2.15.0-2ubuntu1) ...
279s Regenerating fonts cache... done.
279s Setting up libxft2:arm64 (2.3.6-1build1) ...
279s Setting up libtk8.6:arm64 (8.6.16-1) ...
279s Setting up libpango-1.0-0:arm64 (1.56.2-1) ...
279s Setting up libcairo2:arm64 (1.18.2-2) ...
279s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ...
279s Setting up libpangoft2-1.0-0:arm64 (1.56.2-1) ...
279s Setting up libpangocairo-1.0-0:arm64 (1.56.2-1) ...
279s Setting up r-base-core (4.4.3-1) ...
280s Creating config file /etc/R/Renviron with new version
280s Setting up r-cran-crayon (1.5.3-1) ...
280s Setting up r-cran-ps (1.9.0-1) ...
280s Setting up r-cran-r6 (2.6.1-1) ...
280s Setting up r-cran-pkgkitten (0.2.4-1) ...
280s Setting up r-cran-magrittr (2.0.3-1) ...
280s Setting up r-cran-littler (0.3.20-2) ...
280s Setting up r-cran-fs (1.6.5+dfsg-1) ...
280s Setting up r-cran-rcpp (1.0.14-1) ...
280s Setting up r-cran-brio (1.1.5-1) ...
280s Setting up r-cran-diffobj (0.3.5-1) ...
280s Setting up r-cran-rlang (1.1.5-1) ...
280s Setting up r-cran-isospecr (2.1.3-1) ...
280s Setting up littler (0.3.20-2) ...
280s Setting up r-cran-withr (3.0.2+dfsg-1) ...
280s Setting up r-cran-processx (3.8.6-1) ...
280s Setting up r-cran-praise (1.0.0-4build1) ...
280s Setting up r-cran-digest (0.6.37-1) ...
280s Setting up r-cran-evaluate (1.0.3-1) ...
280s Setting up r-cran-glue (1.8.0-1) ...
280s Setting up r-cran-cli (3.6.4-1) ...
280s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
280s Setting up r-cran-rprojroot (2.0.4-2) ...
280s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
280s Setting up r-cran-waldo (0.6.1-2) ...
280s Setting up r-cran-callr (3.7.6-1) ...
280s Setting up r-cran-desc (1.4.3-1) ...
280s Setting up r-cran-pkgbuild (1.4.6-1) ...
280s Setting up r-cran-pkgload (1.4.0-1) ...
280s Setting up r-cran-testthat (3.2.3-1) ...
280s Processing triggers for libc-bin (2.41-1ubuntu2) ...
280s Processing triggers for man-db (2.13.0-1) ...
281s Processing triggers for install-info (7.1.1-1) ...
282s autopkgtest [15:38:51]: test run-unit-test: [-----------------------
282s BEGIN TEST testthat.R
282s 
282s R version 4.4.3 (2025-02-28) -- "Trophy Case"
282s Copyright (C) 2025 The R Foundation for Statistical Computing
282s Platform: aarch64-unknown-linux-gnu
282s 
282s R is free software and comes with ABSOLUTELY NO WARRANTY.
282s You are welcome to redistribute it under certain conditions.
282s Type 'license()' or 'licence()' for distribution details.
282s 
282s R is a collaborative project with many contributors.
282s Type 'contributors()' for more information and
282s 'citation()' on how to cite R or R packages in publications.
282s 
282s Type 'demo()' for some demos, 'help()' for on-line help, or
282s 'help.start()' for an HTML browser interface to help.
282s Type 'q()' to quit R.
282s 
283s > library(testthat)
283s > library(IsoSpecR)
283s > 
283s > test_check("IsoSpecR")
283s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
283s > 
283s autopkgtest [15:38:52]: test run-unit-test: -----------------------]
284s run-unit-test        PASS
284s autopkgtest [15:38:53]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
284s autopkgtest [15:38:53]: test pkg-r-autopkgtest: preparing testbed
284s Reading package lists...
285s Building dependency tree...
285s Reading state information...
285s Starting pkgProblemResolver with broken count: 0
285s Starting 2 pkgProblemResolver with broken count: 0
285s Done
286s The following NEW packages will be installed:
286s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
286s   dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
286s   gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14
286s   gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools
286s   libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
286s   libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev
286s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3
286s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
286s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
286s   libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev
286s   zlib1g-dev
286s 0 upgraded, 54 newly installed, 0 to remove and 0 not upgraded.
286s Need to get 92.7 MB of archives.
286s After this operation, 334 MB of additional disk space will be used.
286s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
287s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
287s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB]
300s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B]
300s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B]
300s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB]
300s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB]
300s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB]
300s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB]
303s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB]
305s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB]
308s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB]
309s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB]
311s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB]
314s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB]
340s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB]
341s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B]
341s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B]
341s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB]
344s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB]
359s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB]
359s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B]
359s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B]
359s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
359s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB]
360s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB]
360s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB]
374s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB]
374s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B]
374s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B]
374s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB]
374s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB]
374s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB]
374s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB]
374s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB]
389s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB]
390s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
390s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
390s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB]
395s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB]
396s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB]
396s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB]
396s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B]
396s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB]
397s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB]
397s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
398s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB]
398s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB]
398s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB]
399s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB]
399s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB]
399s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB]
399s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B]
399s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
399s Fetched 92.7 MB in 1min 53s (821 kB/s)
399s Selecting previously unselected package libisl23:arm64.
399s (Reading database ... 
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(Reading database ... 87484 files and directories currently installed.)
399s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ...
399s Unpacking libisl23:arm64 (0.27-1) ...
399s Selecting previously unselected package libmpc3:arm64.
399s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ...
399s Unpacking libmpc3:arm64 (1.3.1-1build2) ...
399s Selecting previously unselected package cpp-14-aarch64-linux-gnu.
399s Preparing to unpack .../02-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
399s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
400s Selecting previously unselected package cpp-14.
400s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_arm64.deb ...
400s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
400s Selecting previously unselected package cpp-aarch64-linux-gnu.
400s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
400s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
400s Selecting previously unselected package cpp.
400s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ...
400s Unpacking cpp (4:14.2.0-1ubuntu1) ...
400s Selecting previously unselected package libcc1-0:arm64.
400s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_arm64.deb ...
400s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ...
400s Selecting previously unselected package libitm1:arm64.
400s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_arm64.deb ...
400s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ...
400s Selecting previously unselected package libasan8:arm64.
400s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_arm64.deb ...
400s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ...
400s Selecting previously unselected package liblsan0:arm64.
400s Preparing to unpack .../09-liblsan0_15-20250222-0ubuntu1_arm64.deb ...
400s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ...
400s Selecting previously unselected package libtsan2:arm64.
400s Preparing to unpack .../10-libtsan2_15-20250222-0ubuntu1_arm64.deb ...
400s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ...
400s Selecting previously unselected package libubsan1:arm64.
400s Preparing to unpack .../11-libubsan1_15-20250222-0ubuntu1_arm64.deb ...
400s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ...
400s Selecting previously unselected package libhwasan0:arm64.
400s Preparing to unpack .../12-libhwasan0_15-20250222-0ubuntu1_arm64.deb ...
400s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ...
400s Selecting previously unselected package libgcc-14-dev:arm64.
400s Preparing to unpack .../13-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ...
400s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ...
400s Selecting previously unselected package gcc-14-aarch64-linux-gnu.
400s Preparing to unpack .../14-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
400s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
401s Selecting previously unselected package gcc-14.
401s Preparing to unpack .../15-gcc-14_14.2.0-17ubuntu3_arm64.deb ...
401s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
401s Selecting previously unselected package gcc-aarch64-linux-gnu.
401s Preparing to unpack .../16-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
401s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
401s Selecting previously unselected package gcc.
401s Preparing to unpack .../17-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ...
401s Unpacking gcc (4:14.2.0-1ubuntu1) ...
401s Selecting previously unselected package libstdc++-14-dev:arm64.
401s Preparing to unpack .../18-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ...
401s Unpacking libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ...
401s Selecting previously unselected package g++-14-aarch64-linux-gnu.
401s Preparing to unpack .../19-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
401s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
401s Selecting previously unselected package g++-14.
401s Preparing to unpack .../20-g++-14_14.2.0-17ubuntu3_arm64.deb ...
401s Unpacking g++-14 (14.2.0-17ubuntu3) ...
401s Selecting previously unselected package g++-aarch64-linux-gnu.
401s Preparing to unpack .../21-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
401s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
401s Selecting previously unselected package g++.
402s Preparing to unpack .../22-g++_4%3a14.2.0-1ubuntu1_arm64.deb ...
402s Unpacking g++ (4:14.2.0-1ubuntu1) ...
402s Selecting previously unselected package build-essential.
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402s Unpacking build-essential (12.10ubuntu1) ...
402s Selecting previously unselected package dctrl-tools.
402s Preparing to unpack .../24-dctrl-tools_2.24-3build3_arm64.deb ...
402s Unpacking dctrl-tools (2.24-3build3) ...
402s Selecting previously unselected package libgfortran-14-dev:arm64.
402s Preparing to unpack .../25-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ...
402s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ...
402s Selecting previously unselected package gfortran-14-aarch64-linux-gnu.
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402s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
402s Selecting previously unselected package gfortran-14.
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402s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
402s Selecting previously unselected package gfortran-aarch64-linux-gnu.
402s Preparing to unpack .../28-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
402s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
402s Selecting previously unselected package gfortran.
402s Preparing to unpack .../29-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ...
402s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
402s Selecting previously unselected package icu-devtools.
402s Preparing to unpack .../30-icu-devtools_76.1-1ubuntu2_arm64.deb ...
402s Unpacking icu-devtools (76.1-1ubuntu2) ...
402s Selecting previously unselected package libblas-dev:arm64.
402s Preparing to unpack .../31-libblas-dev_3.12.1-2_arm64.deb ...
402s Unpacking libblas-dev:arm64 (3.12.1-2) ...
402s Selecting previously unselected package libbz2-dev:arm64.
402s Preparing to unpack .../32-libbz2-dev_1.0.8-6_arm64.deb ...
402s Unpacking libbz2-dev:arm64 (1.0.8-6) ...
402s Selecting previously unselected package libdeflate-dev:arm64.
402s Preparing to unpack .../33-libdeflate-dev_1.23-1_arm64.deb ...
402s Unpacking libdeflate-dev:arm64 (1.23-1) ...
402s Selecting previously unselected package libicu-dev:arm64.
402s Preparing to unpack .../34-libicu-dev_76.1-1ubuntu2_arm64.deb ...
402s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ...
402s Selecting previously unselected package libjpeg-turbo8-dev:arm64.
402s Preparing to unpack .../35-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ...
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403s Selecting previously unselected package libjpeg8-dev:arm64.
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403s Selecting previously unselected package libjpeg-dev:arm64.
403s Preparing to unpack .../37-libjpeg-dev_8c-2ubuntu11_arm64.deb ...
403s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ...
403s Selecting previously unselected package liblapack-dev:arm64.
403s Preparing to unpack .../38-liblapack-dev_3.12.1-2_arm64.deb ...
403s Unpacking liblapack-dev:arm64 (3.12.1-2) ...
403s Selecting previously unselected package libncurses-dev:arm64.
403s Preparing to unpack .../39-libncurses-dev_6.5+20250216-2_arm64.deb ...
403s Unpacking libncurses-dev:arm64 (6.5+20250216-2) ...
403s Selecting previously unselected package libpcre2-16-0:arm64.
403s Preparing to unpack .../40-libpcre2-16-0_10.45-1_arm64.deb ...
403s Unpacking libpcre2-16-0:arm64 (10.45-1) ...
403s Selecting previously unselected package libpcre2-32-0:arm64.
403s Preparing to unpack .../41-libpcre2-32-0_10.45-1_arm64.deb ...
403s Unpacking libpcre2-32-0:arm64 (10.45-1) ...
403s Selecting previously unselected package libpcre2-posix3:arm64.
403s Preparing to unpack .../42-libpcre2-posix3_10.45-1_arm64.deb ...
403s Unpacking libpcre2-posix3:arm64 (10.45-1) ...
403s Selecting previously unselected package libpcre2-dev:arm64.
403s Preparing to unpack .../43-libpcre2-dev_10.45-1_arm64.deb ...
403s Unpacking libpcre2-dev:arm64 (10.45-1) ...
403s Selecting previously unselected package libpkgconf3:arm64.
403s Preparing to unpack .../44-libpkgconf3_1.8.1-4_arm64.deb ...
403s Unpacking libpkgconf3:arm64 (1.8.1-4) ...
403s Selecting previously unselected package zlib1g-dev:arm64.
403s Preparing to unpack .../45-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ...
403s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
403s Selecting previously unselected package libpng-dev:arm64.
403s Preparing to unpack .../46-libpng-dev_1.6.47-1_arm64.deb ...
403s Unpacking libpng-dev:arm64 (1.6.47-1) ...
403s Selecting previously unselected package libreadline-dev:arm64.
403s Preparing to unpack .../47-libreadline-dev_8.2-6_arm64.deb ...
403s Unpacking libreadline-dev:arm64 (8.2-6) ...
403s Selecting previously unselected package liblzma-dev:arm64.
403s Preparing to unpack .../48-liblzma-dev_5.6.4-1_arm64.deb ...
403s Unpacking liblzma-dev:arm64 (5.6.4-1) ...
403s Selecting previously unselected package pkgconf-bin.
403s Preparing to unpack .../49-pkgconf-bin_1.8.1-4_arm64.deb ...
403s Unpacking pkgconf-bin (1.8.1-4) ...
403s Selecting previously unselected package pkgconf:arm64.
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403s Unpacking pkgconf:arm64 (1.8.1-4) ...
403s Selecting previously unselected package libtirpc-dev:arm64.
403s Preparing to unpack .../51-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ...
403s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ...
403s Selecting previously unselected package r-base-dev.
403s Preparing to unpack .../52-r-base-dev_4.4.3-1_all.deb ...
403s Unpacking r-base-dev (4.4.3-1) ...
404s Selecting previously unselected package pkg-r-autopkgtest.
404s Preparing to unpack .../53-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
404s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
404s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ...
404s Setting up libncurses-dev:arm64 (6.5+20250216-2) ...
404s Setting up libreadline-dev:arm64 (8.2-6) ...
404s Setting up libpcre2-16-0:arm64 (10.45-1) ...
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404s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ...
404s Setting up libpkgconf3:arm64 (1.8.1-4) ...
404s Setting up libmpc3:arm64 (1.3.1-1build2) ...
404s Setting up icu-devtools (76.1-1ubuntu2) ...
404s Setting up pkgconf-bin (1.8.1-4) ...
404s Setting up liblzma-dev:arm64 (5.6.4-1) ...
404s Setting up libubsan1:arm64 (15-20250222-0ubuntu1) ...
404s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
404s Setting up libpcre2-posix3:arm64 (10.45-1) ...
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404s Setting up libasan8:arm64 (15-20250222-0ubuntu1) ...
404s Setting up libtsan2:arm64 (15-20250222-0ubuntu1) ...
404s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ...
404s Setting up libisl23:arm64 (0.27-1) ...
404s Setting up libdeflate-dev:arm64 (1.23-1) ...
404s Setting up libicu-dev:arm64 (76.1-1ubuntu2) ...
404s Setting up libcc1-0:arm64 (15-20250222-0ubuntu1) ...
404s Setting up liblsan0:arm64 (15-20250222-0ubuntu1) ...
404s Setting up libblas-dev:arm64 (3.12.1-2) ...
404s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
404s Setting up dctrl-tools (2.24-3build3) ...
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404s Setting up libbz2-dev:arm64 (1.0.8-6) ...
404s Setting up libpcre2-dev:arm64 (10.45-1) ...
404s Setting up libpng-dev:arm64 (1.6.47-1) ...
404s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ...
404s Setting up pkgconf:arm64 (1.8.1-4) ...
404s Setting up liblapack-dev:arm64 (3.12.1-2) ...
404s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
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404s Setting up libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ...
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404s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
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404s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
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404s Setting up gfortran (4:14.2.0-1ubuntu1) ...
404s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
404s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
404s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
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404s Setting up r-base-dev (4.4.3-1) ...
404s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
404s Processing triggers for libc-bin (2.41-1ubuntu2) ...
404s Processing triggers for man-db (2.13.0-1) ...
405s Processing triggers for install-info (7.1.1-1) ...
406s autopkgtest [15:40:55]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
406s autopkgtest [15:40:55]: test pkg-r-autopkgtest: [-----------------------
406s Test: Try to load the R library IsoSpecR
406s 
406s R version 4.4.3 (2025-02-28) -- "Trophy Case"
406s Copyright (C) 2025 The R Foundation for Statistical Computing
406s Platform: aarch64-unknown-linux-gnu
406s 
406s R is free software and comes with ABSOLUTELY NO WARRANTY.
406s You are welcome to redistribute it under certain conditions.
406s Type 'license()' or 'licence()' for distribution details.
406s 
406s R is a collaborative project with many contributors.
406s Type 'contributors()' for more information and
406s 'citation()' on how to cite R or R packages in publications.
406s 
406s Type 'demo()' for some demos, 'help()' for on-line help, or
406s 'help.start()' for an HTML browser interface to help.
406s Type 'q()' to quit R.
406s 
406s > library('IsoSpecR')
406s > 
406s > 
406s Other tests are currently unsupported!
406s They will be progressively added.
407s autopkgtest [15:40:56]: test pkg-r-autopkgtest: -----------------------]
407s pkg-r-autopkgtest    PASS
407s autopkgtest [15:40:56]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
408s autopkgtest [15:40:56]: @@@@@@@@@@@@@@@@@@@@ summary
408s run-unit-test        PASS
408s pkg-r-autopkgtest    PASS
413s nova [W] Using flock in prodstack6-arm64
413s Creating nova instance adt-plucky-arm64-r-cran-isospecr-20250315-153409-juju-7f2275-prod-proposed-migration-environment-2-1aa5be00-e2e8-482e-bc56-6a6dbedb3cc2 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)...
413s nova [W] Timed out waiting for da31ef72-cba1-4b78-9a19-b8e2f15feb69 to get deleted.