0s autopkgtest [15:33:34]: starting date and time: 2025-03-15 15:33:34+0000 0s autopkgtest [15:33:34]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:33:34]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.kqfyits2/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-iso --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-40.secgroup --name adt-plucky-arm64-r-cran-iso-20250315-153334-juju-7f2275-prod-proposed-migration-environment-2-e98a2310-5001-49b9-aea6-b294c40cf7a4 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 171s autopkgtest [15:36:25]: testbed dpkg architecture: arm64 172s autopkgtest [15:36:26]: testbed apt version: 2.9.33 172s autopkgtest [15:36:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup 172s autopkgtest [15:36:26]: testbed release detected to be: None 173s autopkgtest [15:36:27]: updating testbed package index (apt update) 173s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 174s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 174s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 174s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 174s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 174s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 174s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 174s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [78.2 kB] 174s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1976 B] 174s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 174s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [346 kB] 175s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [15.8 kB] 175s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 175s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [572 B] 175s Fetched 1094 kB in 2s (654 kB/s) 176s Reading package lists... 177s Reading package lists... 177s Building dependency tree... 177s Reading state information... 177s Calculating upgrade... 178s Calculating upgrade... 178s The following packages will be upgraded: 178s python3-jinja2 strace 178s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 178s Need to get 608 kB of archives. 178s After this operation, 11.3 kB of additional disk space will be used. 178s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 179s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 179s Fetched 608 kB in 1s (576 kB/s) 180s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 180s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 180s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 180s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 180s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 180s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 180s Setting up strace (6.13+ds-1ubuntu1) ... 180s Processing triggers for man-db (2.13.0-1) ... 181s Reading package lists... 181s Building dependency tree... 181s Reading state information... 181s Solving dependencies... 182s The following packages will be REMOVED: 182s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 182s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 182s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 182s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 182s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 182s After this operation, 267 MB disk space will be freed. 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 182s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 182s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 182s Removing libpython3.12t64:arm64 (3.12.9-1) ... 182s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 182s Removing libnsl2:arm64 (1.3.0-3build3) ... 182s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 183s Removing libunwind8:arm64 (1.6.2-3.1) ... 183s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 183s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 185s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 185s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 185s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 185s /etc/kernel/postrm.d/initramfs-tools: 185s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 185s /etc/kernel/postrm.d/zz-flash-kernel: 185s flash-kernel: Kernel 6.11.0-8-generic has been removed. 185s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 185s /etc/kernel/postrm.d/zz-update-grub: 185s Sourcing file `/etc/default/grub' 185s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 185s Generating grub configuration file ... 185s Found linux image: /boot/vmlinuz-6.14.0-10-generic 186s Found initrd image: /boot/initrd.img-6.14.0-10-generic 186s Warning: os-prober will not be executed to detect other bootable partitions. 186s Systems on them will not be added to the GRUB boot configuration. 186s Check GRUB_DISABLE_OS_PROBER documentation entry. 186s Adding boot menu entry for UEFI Firmware Settings ... 186s done 186s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 186s Processing triggers for libc-bin (2.41-1ubuntu1) ... 186s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 186s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 186s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 186s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 187s autopkgtest [15:36:41]: upgrading testbed (apt dist-upgrade and autopurge) 187s Reading package lists... 187s Building dependency tree... 187s Reading state information... 188s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 188s Starting 2 pkgProblemResolver with broken count: 0 188s Done 188s Entering ResolveByKeep 189s 189s Calculating upgrade... 189s The following packages will be upgraded: 189s libc-bin libc-dev-bin libc6 libc6-dev locales 189s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 189s Need to get 9530 kB of archives. 189s After this operation, 0 B of additional disk space will be used. 189s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 192s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 192s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 194s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 195s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 200s Preconfiguring packages ... 200s Fetched 9530 kB in 10s (925 kB/s) 200s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 200s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 200s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 200s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 200s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 200s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 201s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 201s Setting up libc6:arm64 (2.41-1ubuntu2) ... 201s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 201s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 201s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 201s Setting up libc-bin (2.41-1ubuntu2) ... 201s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 201s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 201s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 201s Setting up locales (2.41-1ubuntu2) ... 202s Generating locales (this might take a while)... 204s en_US.UTF-8... done 204s Generation complete. 204s Setting up libc-dev-bin (2.41-1ubuntu2) ... 204s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 204s Processing triggers for man-db (2.13.0-1) ... 205s Processing triggers for systemd (257.3-1ubuntu3) ... 206s Reading package lists... 206s Building dependency tree... 206s Reading state information... 207s Starting pkgProblemResolver with broken count: 0 207s Starting 2 pkgProblemResolver with broken count: 0 207s Done 207s Solving dependencies... 207s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 208s autopkgtest [15:37:02]: rebooting testbed after setup commands that affected boot 231s autopkgtest [15:37:25]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 234s autopkgtest [15:37:28]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-iso 236s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-iso 0.0-21-1 (dsc) [2025 B] 236s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-iso 0.0-21-1 (tar) [154 kB] 236s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-iso 0.0-21-1 (diff) [2344 B] 236s gpgv: Signature made Thu Oct 12 18:11:42 2023 UTC 236s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 236s gpgv: issuer "tille@debian.org" 236s gpgv: Can't check signature: No public key 236s dpkg-source: warning: cannot verify inline signature for ./r-cran-iso_0.0-21-1.dsc: no acceptable signature found 236s autopkgtest [15:37:30]: testing package r-cran-iso version 0.0-21-1 237s autopkgtest [15:37:31]: build not needed 239s autopkgtest [15:37:33]: test vignette: preparing testbed 239s Reading package lists... 239s Building dependency tree... 239s Reading state information... 240s Starting pkgProblemResolver with broken count: 0 240s Starting 2 pkgProblemResolver with broken count: 0 240s Done 241s The following NEW packages will be installed: 241s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 241s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1 241s libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 241s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 241s libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 241s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 241s libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-iso unzip 241s x11-common xdg-utils zip 241s 0 upgraded, 45 newly installed, 0 to remove and 0 not upgraded. 241s Need to get 38.5 MB of archives. 241s After this operation, 79.6 MB of additional disk space will be used. 241s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 242s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 243s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 243s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 243s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 244s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 244s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 244s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 244s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 244s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 244s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 245s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 245s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 245s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 246s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 246s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 246s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 247s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 247s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 247s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 248s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 248s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 252s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 252s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 252s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 252s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB] 253s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB] 253s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB] 253s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 253s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 253s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 253s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 253s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 255s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 255s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 256s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 256s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 256s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 256s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 258s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 259s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 259s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 260s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 260s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 330s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-iso arm64 0.0-21-1 [165 kB] 330s Preconfiguring packages ... 330s Fetched 38.5 MB in 1min 29s (431 kB/s) 330s Selecting previously unselected package fonts-dejavu-mono. 331s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 331s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 331s Unpacking fonts-dejavu-mono (2.37-8) ... 331s Selecting previously unselected package fonts-dejavu-core. 331s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 331s Unpacking fonts-dejavu-core (2.37-8) ... 331s Selecting previously unselected package fontconfig-config. 331s Preparing to unpack .../02-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ... 331s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 331s Selecting previously unselected package libfontconfig1:arm64. 331s Preparing to unpack .../03-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ... 331s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 331s Selecting previously unselected package fontconfig. 331s Preparing to unpack .../04-fontconfig_2.15.0-2ubuntu1_arm64.deb ... 331s Unpacking fontconfig (2.15.0-2ubuntu1) ... 331s Selecting previously unselected package libblas3:arm64. 331s Preparing to unpack .../05-libblas3_3.12.1-2_arm64.deb ... 331s Unpacking libblas3:arm64 (3.12.1-2) ... 331s Selecting previously unselected package libpixman-1-0:arm64. 331s Preparing to unpack .../06-libpixman-1-0_0.44.0-3_arm64.deb ... 331s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 331s Selecting previously unselected package libxcb-render0:arm64. 331s Preparing to unpack .../07-libxcb-render0_1.17.0-2_arm64.deb ... 331s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 331s Selecting previously unselected package libxcb-shm0:arm64. 331s Preparing to unpack .../08-libxcb-shm0_1.17.0-2_arm64.deb ... 331s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 331s Selecting previously unselected package libxrender1:arm64. 331s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 331s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 331s Selecting previously unselected package libcairo2:arm64. 331s Preparing to unpack .../10-libcairo2_1.18.2-2_arm64.deb ... 331s Unpacking libcairo2:arm64 (1.18.2-2) ... 331s Selecting previously unselected package libdatrie1:arm64. 331s Preparing to unpack .../11-libdatrie1_0.2.13-3build1_arm64.deb ... 331s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 331s Selecting previously unselected package libdeflate0:arm64. 331s Preparing to unpack .../12-libdeflate0_1.23-1_arm64.deb ... 331s Unpacking libdeflate0:arm64 (1.23-1) ... 331s Selecting previously unselected package libgfortran5:arm64. 331s Preparing to unpack .../13-libgfortran5_15-20250222-0ubuntu1_arm64.deb ... 331s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ... 331s Selecting previously unselected package libgomp1:arm64. 331s Preparing to unpack .../14-libgomp1_15-20250222-0ubuntu1_arm64.deb ... 331s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ... 331s Selecting previously unselected package libgraphite2-3:arm64. 331s Preparing to unpack .../15-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 331s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 331s Selecting previously unselected package libharfbuzz0b:arm64. 331s Preparing to unpack .../16-libharfbuzz0b_10.2.0-1_arm64.deb ... 331s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 332s Selecting previously unselected package x11-common. 332s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu3_all.deb ... 332s Unpacking x11-common (1:7.7+23ubuntu3) ... 332s Selecting previously unselected package libice6:arm64. 332s Preparing to unpack .../18-libice6_2%3a1.1.1-1_arm64.deb ... 332s Unpacking libice6:arm64 (2:1.1.1-1) ... 332s Selecting previously unselected package libjpeg-turbo8:arm64. 332s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 332s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 332s Selecting previously unselected package libjpeg8:arm64. 332s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_arm64.deb ... 332s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 332s Selecting previously unselected package liblapack3:arm64. 332s Preparing to unpack .../21-liblapack3_3.12.1-2_arm64.deb ... 332s Unpacking liblapack3:arm64 (3.12.1-2) ... 332s Selecting previously unselected package liblerc4:arm64. 332s Preparing to unpack .../22-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 332s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 332s Selecting previously unselected package libthai-data. 332s Preparing to unpack .../23-libthai-data_0.1.29-2build1_all.deb ... 332s Unpacking libthai-data (0.1.29-2build1) ... 332s Selecting previously unselected package libthai0:arm64. 332s Preparing to unpack .../24-libthai0_0.1.29-2build1_arm64.deb ... 332s Unpacking libthai0:arm64 (0.1.29-2build1) ... 332s Selecting previously unselected package libpango-1.0-0:arm64. 332s Preparing to unpack .../25-libpango-1.0-0_1.56.2-1_arm64.deb ... 332s Unpacking libpango-1.0-0:arm64 (1.56.2-1) ... 332s Selecting previously unselected package libpangoft2-1.0-0:arm64. 332s Preparing to unpack .../26-libpangoft2-1.0-0_1.56.2-1_arm64.deb ... 332s Unpacking libpangoft2-1.0-0:arm64 (1.56.2-1) ... 332s Selecting previously unselected package libpangocairo-1.0-0:arm64. 332s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.2-1_arm64.deb ... 332s Unpacking libpangocairo-1.0-0:arm64 (1.56.2-1) ... 332s Selecting previously unselected package libpaper2:arm64. 332s Preparing to unpack .../28-libpaper2_2.2.5-0.3_arm64.deb ... 332s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 332s Selecting previously unselected package libpaper-utils. 332s Preparing to unpack .../29-libpaper-utils_2.2.5-0.3_arm64.deb ... 332s Unpacking libpaper-utils (2.2.5-0.3) ... 332s Selecting previously unselected package libsharpyuv0:arm64. 332s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_arm64.deb ... 332s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 332s Selecting previously unselected package libsm6:arm64. 332s Preparing to unpack .../31-libsm6_2%3a1.2.4-1_arm64.deb ... 332s Unpacking libsm6:arm64 (2:1.2.4-1) ... 332s Selecting previously unselected package libtcl8.6:arm64. 332s Preparing to unpack .../32-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 332s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 332s Selecting previously unselected package libjbig0:arm64. 332s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 332s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 332s Selecting previously unselected package libwebp7:arm64. 332s Preparing to unpack .../34-libwebp7_1.5.0-0.1_arm64.deb ... 332s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 332s Selecting previously unselected package libtiff6:arm64. 332s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 332s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 332s Selecting previously unselected package libxft2:arm64. 332s Preparing to unpack .../36-libxft2_2.3.6-1build1_arm64.deb ... 332s Unpacking libxft2:arm64 (2.3.6-1build1) ... 332s Selecting previously unselected package libxss1:arm64. 332s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build3_arm64.deb ... 332s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 332s Selecting previously unselected package libtk8.6:arm64. 332s Preparing to unpack .../38-libtk8.6_8.6.16-1_arm64.deb ... 332s Unpacking libtk8.6:arm64 (8.6.16-1) ... 332s Selecting previously unselected package libxt6t64:arm64. 332s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 332s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 332s Selecting previously unselected package zip. 332s Preparing to unpack .../40-zip_3.0-14ubuntu2_arm64.deb ... 332s Unpacking zip (3.0-14ubuntu2) ... 332s Selecting previously unselected package unzip. 332s Preparing to unpack .../41-unzip_6.0-28ubuntu6_arm64.deb ... 332s Unpacking unzip (6.0-28ubuntu6) ... 333s Selecting previously unselected package xdg-utils. 333s Preparing to unpack .../42-xdg-utils_1.2.1-2ubuntu1_all.deb ... 333s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 333s Selecting previously unselected package r-base-core. 333s Preparing to unpack .../43-r-base-core_4.4.3-1_arm64.deb ... 333s Unpacking r-base-core (4.4.3-1) ... 333s Selecting previously unselected package r-cran-iso. 333s Preparing to unpack .../44-r-cran-iso_0.0-21-1_arm64.deb ... 333s Unpacking r-cran-iso (0.0-21-1) ... 333s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 333s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 333s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 333s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 333s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 333s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 333s Setting up libxcb-render0:arm64 (1.17.0-2) ... 333s Setting up unzip (6.0-28ubuntu6) ... 333s Setting up x11-common (1:7.7+23ubuntu3) ... 333s Setting up libdeflate0:arm64 (1.23-1) ... 333s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 333s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ... 333s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 333s Setting up zip (3.0-14ubuntu2) ... 333s Setting up libblas3:arm64 (3.12.1-2) ... 333s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 333s Setting up fonts-dejavu-mono (2.37-8) ... 333s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ... 333s Setting up fonts-dejavu-core (2.37-8) ... 333s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 333s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ... 333s Setting up libwebp7:arm64 (1.5.0-0.1) ... 333s Setting up libharfbuzz0b:arm64 (10.2.0-1) ... 333s Setting up libthai-data (0.1.29-2build1) ... 333s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 333s Setting up libpaper2:arm64 (2.2.5-0.3) ... 334s Setting up xdg-utils (1.2.1-2ubuntu1) ... 334s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 334s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 334s Setting up libice6:arm64 (2:1.1.1-1) ... 334s Setting up liblapack3:arm64 (3.12.1-2) ... 334s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 334s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 334s Setting up libpaper-utils (2.2.5-0.3) ... 334s Setting up libthai0:arm64 (0.1.29-2build1) ... 334s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 334s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 334s Setting up libsm6:arm64 (2:1.2.4-1) ... 334s Setting up fontconfig (2.15.0-2ubuntu1) ... 336s Regenerating fonts cache... done. 336s Setting up libxft2:arm64 (2.3.6-1build1) ... 336s Setting up libtk8.6:arm64 (8.6.16-1) ... 336s Setting up libpango-1.0-0:arm64 (1.56.2-1) ... 336s Setting up libcairo2:arm64 (1.18.2-2) ... 336s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 336s Setting up libpangoft2-1.0-0:arm64 (1.56.2-1) ... 336s Setting up libpangocairo-1.0-0:arm64 (1.56.2-1) ... 336s Setting up r-base-core (4.4.3-1) ... 336s Creating config file /etc/R/Renviron with new version 336s Setting up r-cran-iso (0.0-21-1) ... 336s Processing triggers for man-db (2.13.0-1) ... 337s Processing triggers for install-info (7.1.1-1) ... 337s Processing triggers for libc-bin (2.41-1ubuntu2) ... 339s autopkgtest [15:39:13]: test vignette: [----------------------- 339s BEGIN VIGNETTE vignettes/algorithm.Rnw 339s Iso 0.0-21 339s 339s An "infelicity" in the function ufit() (whereby 339s it was all too easy to conflate the location of 339s the mode with its index in the entries of the 339s "x" argument) has been corrected. To this end, 339s ufit() now has arguments "lmode" (the location 339s of the mode), and "imode" (its index). At most 339s one of these arguments should be specified. See 339s the help for ufit(). 339s Output file: algorithm.tex 340s autopkgtest [15:39:14]: test vignette: -----------------------] 340s vignette PASS 340s autopkgtest [15:39:14]: test vignette: - - - - - - - - - - results - - - - - - - - - - 341s autopkgtest [15:39:15]: test pkg-r-autopkgtest: preparing testbed 341s Reading package lists... 341s Building dependency tree... 341s Reading state information... 341s Starting pkgProblemResolver with broken count: 0 342s Starting 2 pkgProblemResolver with broken count: 0 342s Done 342s The following NEW packages will be installed: 342s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 342s dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 342s gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 342s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 342s libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 342s libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 342s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 342s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 342s libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev 342s libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev 342s zlib1g-dev 343s 0 upgraded, 54 newly installed, 0 to remove and 0 not upgraded. 343s Need to get 92.7 MB of archives. 343s After this operation, 334 MB of additional disk space will be used. 343s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 344s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 344s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB] 363s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B] 363s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 363s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 363s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB] 363s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB] 363s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB] 368s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB] 371s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB] 376s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB] 378s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB] 380s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB] 383s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB] 411s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB] 412s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 412s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 412s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB] 415s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB] 430s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB] 430s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 430s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 430s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 430s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 430s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB] 430s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB] 443s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB] 443s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 443s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 443s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 443s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 443s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 443s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 443s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 457s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 457s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 457s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 457s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 462s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 463s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 463s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 463s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 463s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 464s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 464s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 465s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB] 465s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 466s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB] 466s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 466s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 466s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 466s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B] 466s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 466s Fetched 92.7 MB in 2min 4s (749 kB/s) 466s Selecting previously unselected package libisl23:arm64. 466s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83855 files and directories currently installed.) 466s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ... 466s Unpacking libisl23:arm64 (0.27-1) ... 466s Selecting previously unselected package libmpc3:arm64. 467s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ... 467s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 467s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 467s Preparing to unpack .../02-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 467s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 467s Selecting previously unselected package cpp-14. 467s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_arm64.deb ... 467s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 467s Selecting previously unselected package cpp-aarch64-linux-gnu. 467s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 467s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 467s Selecting previously unselected package cpp. 467s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 467s Unpacking cpp (4:14.2.0-1ubuntu1) ... 467s Selecting previously unselected package libcc1-0:arm64. 467s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_arm64.deb ... 467s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ... 467s Selecting previously unselected package libitm1:arm64. 467s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_arm64.deb ... 467s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ... 467s Selecting previously unselected package libasan8:arm64. 467s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_arm64.deb ... 467s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ... 467s Selecting previously unselected package liblsan0:arm64. 467s Preparing to unpack .../09-liblsan0_15-20250222-0ubuntu1_arm64.deb ... 467s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ... 467s Selecting previously unselected package libtsan2:arm64. 467s Preparing to unpack .../10-libtsan2_15-20250222-0ubuntu1_arm64.deb ... 467s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ... 467s Selecting previously unselected package libubsan1:arm64. 467s Preparing to unpack .../11-libubsan1_15-20250222-0ubuntu1_arm64.deb ... 467s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ... 467s Selecting previously unselected package libhwasan0:arm64. 467s Preparing to unpack .../12-libhwasan0_15-20250222-0ubuntu1_arm64.deb ... 467s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ... 467s Selecting previously unselected package libgcc-14-dev:arm64. 467s Preparing to unpack .../13-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ... 467s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 467s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 467s Preparing to unpack .../14-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 467s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 468s Selecting previously unselected package gcc-14. 468s Preparing to unpack .../15-gcc-14_14.2.0-17ubuntu3_arm64.deb ... 468s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 468s Selecting previously unselected package gcc-aarch64-linux-gnu. 468s Preparing to unpack .../16-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 468s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 468s Selecting previously unselected package gcc. 468s Preparing to unpack .../17-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ... 468s Unpacking gcc (4:14.2.0-1ubuntu1) ... 468s Selecting previously unselected package libstdc++-14-dev:arm64. 468s Preparing to unpack .../18-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ... 468s Unpacking libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 468s Selecting previously unselected package g++-14-aarch64-linux-gnu. 468s Preparing to unpack .../19-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 468s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 468s Selecting previously unselected package g++-14. 468s Preparing to unpack .../20-g++-14_14.2.0-17ubuntu3_arm64.deb ... 468s Unpacking g++-14 (14.2.0-17ubuntu3) ... 468s Selecting previously unselected package g++-aarch64-linux-gnu. 468s Preparing to unpack .../21-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 468s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 469s Selecting previously unselected package g++. 469s Preparing to unpack .../22-g++_4%3a14.2.0-1ubuntu1_arm64.deb ... 469s Unpacking g++ (4:14.2.0-1ubuntu1) ... 469s Selecting previously unselected package build-essential. 469s Preparing to unpack .../23-build-essential_12.10ubuntu1_arm64.deb ... 469s Unpacking build-essential (12.10ubuntu1) ... 469s Selecting previously unselected package dctrl-tools. 469s Preparing to unpack .../24-dctrl-tools_2.24-3build3_arm64.deb ... 469s Unpacking dctrl-tools (2.24-3build3) ... 469s Selecting previously unselected package libgfortran-14-dev:arm64. 469s Preparing to unpack .../25-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ... 469s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 469s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 469s Preparing to unpack .../26-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 469s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 469s Selecting previously unselected package gfortran-14. 469s Preparing to unpack .../27-gfortran-14_14.2.0-17ubuntu3_arm64.deb ... 469s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 469s Selecting previously unselected package gfortran-aarch64-linux-gnu. 469s Preparing to unpack .../28-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 469s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 469s Selecting previously unselected package gfortran. 469s Preparing to unpack .../29-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ... 469s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 469s Selecting previously unselected package icu-devtools. 469s Preparing to unpack .../30-icu-devtools_76.1-1ubuntu2_arm64.deb ... 469s Unpacking icu-devtools (76.1-1ubuntu2) ... 469s Selecting previously unselected package libblas-dev:arm64. 469s Preparing to unpack .../31-libblas-dev_3.12.1-2_arm64.deb ... 469s Unpacking libblas-dev:arm64 (3.12.1-2) ... 469s Selecting previously unselected package libbz2-dev:arm64. 469s Preparing to unpack .../32-libbz2-dev_1.0.8-6_arm64.deb ... 469s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 469s Selecting previously unselected package libdeflate-dev:arm64. 469s Preparing to unpack .../33-libdeflate-dev_1.23-1_arm64.deb ... 469s Unpacking libdeflate-dev:arm64 (1.23-1) ... 469s Selecting previously unselected package libicu-dev:arm64. 469s Preparing to unpack .../34-libicu-dev_76.1-1ubuntu2_arm64.deb ... 469s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 470s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 470s Preparing to unpack .../35-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 470s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 470s Selecting previously unselected package libjpeg8-dev:arm64. 470s Preparing to unpack .../36-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 470s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 470s Selecting previously unselected package libjpeg-dev:arm64. 470s Preparing to unpack .../37-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 470s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 470s Selecting previously unselected package liblapack-dev:arm64. 470s Preparing to unpack .../38-liblapack-dev_3.12.1-2_arm64.deb ... 470s Unpacking liblapack-dev:arm64 (3.12.1-2) ... 470s Selecting previously unselected package libncurses-dev:arm64. 470s Preparing to unpack .../39-libncurses-dev_6.5+20250216-2_arm64.deb ... 470s Unpacking libncurses-dev:arm64 (6.5+20250216-2) ... 470s Selecting previously unselected package libpcre2-16-0:arm64. 470s Preparing to unpack .../40-libpcre2-16-0_10.45-1_arm64.deb ... 470s Unpacking libpcre2-16-0:arm64 (10.45-1) ... 470s Selecting previously unselected package libpcre2-32-0:arm64. 470s Preparing to unpack .../41-libpcre2-32-0_10.45-1_arm64.deb ... 470s Unpacking libpcre2-32-0:arm64 (10.45-1) ... 470s Selecting previously unselected package libpcre2-posix3:arm64. 470s Preparing to unpack .../42-libpcre2-posix3_10.45-1_arm64.deb ... 470s Unpacking libpcre2-posix3:arm64 (10.45-1) ... 470s Selecting previously unselected package libpcre2-dev:arm64. 470s Preparing to unpack .../43-libpcre2-dev_10.45-1_arm64.deb ... 470s Unpacking libpcre2-dev:arm64 (10.45-1) ... 470s Selecting previously unselected package libpkgconf3:arm64. 470s Preparing to unpack .../44-libpkgconf3_1.8.1-4_arm64.deb ... 470s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 470s Selecting previously unselected package zlib1g-dev:arm64. 470s Preparing to unpack .../45-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 470s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 470s Selecting previously unselected package libpng-dev:arm64. 470s Preparing to unpack .../46-libpng-dev_1.6.47-1_arm64.deb ... 470s Unpacking libpng-dev:arm64 (1.6.47-1) ... 470s Selecting previously unselected package libreadline-dev:arm64. 470s Preparing to unpack .../47-libreadline-dev_8.2-6_arm64.deb ... 470s Unpacking libreadline-dev:arm64 (8.2-6) ... 470s Selecting previously unselected package liblzma-dev:arm64. 470s Preparing to unpack .../48-liblzma-dev_5.6.4-1_arm64.deb ... 470s Unpacking liblzma-dev:arm64 (5.6.4-1) ... 470s Selecting previously unselected package pkgconf-bin. 470s Preparing to unpack .../49-pkgconf-bin_1.8.1-4_arm64.deb ... 470s Unpacking pkgconf-bin (1.8.1-4) ... 470s Selecting previously unselected package pkgconf:arm64. 470s Preparing to unpack .../50-pkgconf_1.8.1-4_arm64.deb ... 470s Unpacking pkgconf:arm64 (1.8.1-4) ... 470s Selecting previously unselected package libtirpc-dev:arm64. 470s Preparing to unpack .../51-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 470s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 470s Selecting previously unselected package r-base-dev. 470s Preparing to unpack .../52-r-base-dev_4.4.3-1_all.deb ... 470s Unpacking r-base-dev (4.4.3-1) ... 470s Selecting previously unselected package pkg-r-autopkgtest. 470s Preparing to unpack .../53-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 470s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 470s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 470s Setting up libncurses-dev:arm64 (6.5+20250216-2) ... 470s Setting up libreadline-dev:arm64 (8.2-6) ... 470s Setting up libpcre2-16-0:arm64 (10.45-1) ... 470s Setting up libpcre2-32-0:arm64 (10.45-1) ... 470s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 470s Setting up libpkgconf3:arm64 (1.8.1-4) ... 470s Setting up libmpc3:arm64 (1.3.1-1build2) ... 470s Setting up icu-devtools (76.1-1ubuntu2) ... 470s Setting up pkgconf-bin (1.8.1-4) ... 470s Setting up liblzma-dev:arm64 (5.6.4-1) ... 470s Setting up libubsan1:arm64 (15-20250222-0ubuntu1) ... 470s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 470s Setting up libpcre2-posix3:arm64 (10.45-1) ... 470s Setting up libhwasan0:arm64 (15-20250222-0ubuntu1) ... 470s Setting up libasan8:arm64 (15-20250222-0ubuntu1) ... 470s Setting up libtsan2:arm64 (15-20250222-0ubuntu1) ... 470s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 470s Setting up libisl23:arm64 (0.27-1) ... 470s Setting up libdeflate-dev:arm64 (1.23-1) ... 470s Setting up libicu-dev:arm64 (76.1-1ubuntu2) ... 470s Setting up libcc1-0:arm64 (15-20250222-0ubuntu1) ... 470s Setting up liblsan0:arm64 (15-20250222-0ubuntu1) ... 470s Setting up libblas-dev:arm64 (3.12.1-2) ... 470s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 470s Setting up dctrl-tools (2.24-3build3) ... 470s Setting up libitm1:arm64 (15-20250222-0ubuntu1) ... 470s Setting up libbz2-dev:arm64 (1.0.8-6) ... 470s Setting up libpcre2-dev:arm64 (10.45-1) ... 470s Setting up libpng-dev:arm64 (1.6.47-1) ... 470s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 470s Setting up pkgconf:arm64 (1.8.1-4) ... 470s Setting up liblapack-dev:arm64 (3.12.1-2) ... 470s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 470s Setting up cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 470s Setting up libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 470s Setting up libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 470s Setting up libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 470s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 470s Setting up cpp-14 (14.2.0-17ubuntu3) ... 470s Setting up cpp (4:14.2.0-1ubuntu1) ... 471s Setting up gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 471s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 471s Setting up g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 471s Setting up gcc-14 (14.2.0-17ubuntu3) ... 471s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 471s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 471s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 471s Setting up g++-14 (14.2.0-17ubuntu3) ... 471s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 471s Setting up gcc (4:14.2.0-1ubuntu1) ... 471s Setting up g++ (4:14.2.0-1ubuntu1) ... 471s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 471s Setting up build-essential (12.10ubuntu1) ... 471s Setting up gfortran (4:14.2.0-1ubuntu1) ... 471s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 471s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 471s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 471s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 471s Setting up r-base-dev (4.4.3-1) ... 471s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 471s Processing triggers for libc-bin (2.41-1ubuntu2) ... 471s Processing triggers for man-db (2.13.0-1) ... 472s Processing triggers for install-info (7.1.1-1) ... 473s autopkgtest [15:41:27]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 473s autopkgtest [15:41:27]: test pkg-r-autopkgtest: [----------------------- 473s Test: Try to load the R library Iso 473s 473s R version 4.4.3 (2025-02-28) -- "Trophy Case" 473s Copyright (C) 2025 The R Foundation for Statistical Computing 473s Platform: aarch64-unknown-linux-gnu 473s 473s R is free software and comes with ABSOLUTELY NO WARRANTY. 473s You are welcome to redistribute it under certain conditions. 473s Type 'license()' or 'licence()' for distribution details. 473s 473s R is a collaborative project with many contributors. 473s Type 'contributors()' for more information and 473s 'citation()' on how to cite R or R packages in publications. 473s 473s Type 'demo()' for some demos, 'help()' for on-line help, or 473s 'help.start()' for an HTML browser interface to help. 473s Type 'q()' to quit R. 473s 473s > library('Iso') 473s Iso 0.0-21 473s 473s An "infelicity" in the function ufit() (whereby 473s it was all too easy to conflate the location of 473s the mode with its index in the entries of the 473s "x" argument) has been corrected. To this end, 473s ufit() now has arguments "lmode" (the location 473s of the mode), and "imode" (its index). At most 473s one of these arguments should be specified. See 473s the help for ufit(). 473s > 473s > 473s Other tests are currently unsupported! 473s They will be progressively added. 473s autopkgtest [15:41:27]: test pkg-r-autopkgtest: -----------------------] 474s pkg-r-autopkgtest PASS 474s autopkgtest [15:41:28]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 474s autopkgtest [15:41:28]: @@@@@@@@@@@@@@@@@@@@ summary 474s vignette PASS 474s pkg-r-autopkgtest PASS 493s nova [W] Using flock in prodstack6-arm64 493s flock: timeout while waiting to get lock 493s Creating nova instance adt-plucky-arm64-r-cran-iso-20250315-153334-juju-7f2275-prod-proposed-migration-environment-2-e98a2310-5001-49b9-aea6-b294c40cf7a4 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 493s nova [W] Timed out waiting for 923ff6d6-ed16-4840-bda1-ddff859664c5 to get deleted.