0s autopkgtest [13:54:52]: starting date and time: 2025-01-09 13:54:52+0000 0s autopkgtest [13:54:52]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [13:54:52]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.a1qnr0ch/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-gbm --apt-upgrade r-cran-gbm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-gbm/2.2.2-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-38.secgroup --name adt-plucky-arm64-r-cran-gbm-20250109-135452-juju-7f2275-prod-proposed-migration-environment-15-b142698f-e4a0-45ca-86cc-1968c5001558 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 152s autopkgtest [13:57:24]: testbed dpkg architecture: arm64 153s autopkgtest [13:57:25]: testbed apt version: 2.9.18 153s autopkgtest [13:57:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 153s autopkgtest [13:57:25]: testbed release detected to be: None 154s autopkgtest [13:57:26]: updating testbed package index (apt update) 155s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 155s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 155s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 155s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 155s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.6 kB] 155s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [760 kB] 155s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 155s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [127 kB] 155s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [243 kB] 155s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [57.8 kB] 155s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [978 kB] 155s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [11.7 kB] 155s Fetched 2278 kB in 1s (2377 kB/s) 156s Reading package lists... 157s Reading package lists... 157s Building dependency tree... 157s Reading state information... 158s Calculating upgrade... 158s The following packages will be upgraded: 158s libgpgme11t64 python3-oauthlib 159s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 159s Need to get 232 kB of archives. 159s After this operation, 0 B of additional disk space will be used. 159s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libgpgme11t64 arm64 1.24.1-2ubuntu1 [142 kB] 159s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-oauthlib all 3.2.2-3 [89.9 kB] 159s Fetched 232 kB in 0s (558 kB/s) 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80185 files and directories currently installed.) 160s Preparing to unpack .../libgpgme11t64_1.24.1-2ubuntu1_arm64.deb ... 160s Unpacking libgpgme11t64:arm64 (1.24.1-2ubuntu1) over (1.24.0-2ubuntu1) ... 160s Preparing to unpack .../python3-oauthlib_3.2.2-3_all.deb ... 160s Unpacking python3-oauthlib (3.2.2-3) over (3.2.2-2) ... 160s Setting up python3-oauthlib (3.2.2-3) ... 160s Setting up libgpgme11t64:arm64 (1.24.1-2ubuntu1) ... 160s Processing triggers for libc-bin (2.40-4ubuntu1) ... 160s Reading package lists... 161s Building dependency tree... 161s Reading state information... 161s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 161s autopkgtest [13:57:33]: upgrading testbed (apt dist-upgrade and autopurge) 162s Reading package lists... 162s Building dependency tree... 162s Reading state information... 163s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 163s Starting 2 pkgProblemResolver with broken count: 0 163s Done 163s Entering ResolveByKeep 164s 164s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 164s Reading package lists... 165s Building dependency tree... 165s Reading state information... 165s Starting pkgProblemResolver with broken count: 0 165s Starting 2 pkgProblemResolver with broken count: 0 165s Done 166s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 168s autopkgtest [13:57:40]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 169s autopkgtest [13:57:41]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-gbm 170s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-gbm 2.2.2-1 (dsc) [2188 B] 170s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-gbm 2.2.2-1 (tar) [452 kB] 170s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-gbm 2.2.2-1 (diff) [3316 B] 171s gpgv: Signature made Fri Oct 4 00:10:04 2024 UTC 171s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 171s gpgv: issuer "plessy@debian.org" 171s gpgv: Can't check signature: No public key 171s dpkg-source: warning: cannot verify inline signature for ./r-cran-gbm_2.2.2-1.dsc: no acceptable signature found 171s autopkgtest [13:57:43]: testing package r-cran-gbm version 2.2.2-1 171s autopkgtest [13:57:43]: build not needed 175s autopkgtest [13:57:47]: test run-unit-test: preparing testbed 175s Reading package lists... 175s Building dependency tree... 175s Reading state information... 176s Starting pkgProblemResolver with broken count: 0 176s Starting 2 pkgProblemResolver with broken count: 0 176s Done 177s The following NEW packages will be installed: 177s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 177s fonts-glyphicons-halflings fonts-mathjax libblas3 libcairo2 libdatrie1 177s libdeflate0 libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 177s libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 177s libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-mathjax 177s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 177s libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 177s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 177s libxft2 libxrender1 libxss1 libxt6t64 node-html5shiv node-normalize.css 177s r-base-core r-cran-askpass r-cran-cli r-cran-colorspace r-cran-covr 177s r-cran-crayon r-cran-curl r-cran-digest r-cran-evaluate r-cran-fansi 177s r-cran-farver r-cran-gbm r-cran-ggplot2 r-cran-glue r-cran-gridextra 177s r-cran-gtable r-cran-highr r-cran-httr r-cran-isoband r-cran-jsonlite 177s r-cran-knitr r-cran-labeling r-cran-lattice r-cran-lazyeval r-cran-lifecycle 177s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-mime 177s r-cran-munsell r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgconfig 177s r-cran-r6 r-cran-rcolorbrewer r-cran-rex r-cran-rlang r-cran-runit 177s r-cran-scales r-cran-survival r-cran-sys r-cran-tibble r-cran-tinytest 177s r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-withr 177s r-cran-xfun r-cran-yaml unzip x11-common xdg-utils zip 177s 0 upgraded, 104 newly installed, 0 to remove and 0 not upgraded. 177s Need to get 94.6 MB of archives. 177s After this operation, 204 MB of additional disk space will be used. 177s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 177s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 177s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 177s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 177s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 177s Get:6 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 177s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 177s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB] 177s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 177s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 177s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 177s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 177s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 177s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 177s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB] 177s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-12ubuntu1 [437 kB] 177s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-12ubuntu1 [145 kB] 177s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 178s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.1.0-1 [489 kB] 178s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 178s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 178s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 178s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 178s Get:24 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 178s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 178s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 178s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 178s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB] 178s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 178s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 178s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 178s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.55.0+ds-3 [237 kB] 178s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.55.0+ds-3 [48.9 kB] 178s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.55.0+ds-3 [27.5 kB] 178s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 178s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 178s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 178s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 178s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [987 kB] 178s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 178s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 178s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 178s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 178s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 178s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.15-1 [774 kB] 178s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 178s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 178s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 178s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu1 [172 kB] 178s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 178s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 178s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.2-1 [28.4 MB] 179s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 179s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 179s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB] 179s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 179s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 179s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB] 179s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 179s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rex all 1.2.1-1 [129 kB] 179s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-curl arm64 5.2.3+dfsg-1ubuntu1 [180 kB] 179s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 179s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-openssl arm64 2.2.0+dfsg-1 [404 kB] 179s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 179s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 179s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 179s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 180s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 180s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 180s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.0-1 [111 kB] 180s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 180s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 180s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 180s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-1-1 [4138 kB] 180s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 180s Get:76 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-gbm arm64 2.2.2-1 [575 kB] 180s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 180s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.4-1 [1707 kB] 180s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 180s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 180s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 181s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-63-1 [1110 kB] 181s Get:83 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.166-1 [2312 kB] 181s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 181s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 181s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 181s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 181s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 181s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 181s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 181s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 181s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 181s Get:93 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 181s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 181s Get:95 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 181s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 181s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 181s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.49+dfsg-1 [544 kB] 181s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 181s Get:100 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 181s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 182s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-runit all 0.4.33-1 [377 kB] 182s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytest all 1.4.1-1 [674 kB] 182s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 184s Preconfiguring packages ... 184s Fetched 94.6 MB in 7s (14.0 MB/s) 184s Selecting previously unselected package fonts-dejavu-mono. 184s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80185 files and directories currently installed.) 184s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 184s Unpacking fonts-dejavu-mono (2.37-8) ... 184s Selecting previously unselected package fonts-dejavu-core. 184s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 184s Unpacking fonts-dejavu-core (2.37-8) ... 184s Selecting previously unselected package fontconfig-config. 184s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 184s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 184s Selecting previously unselected package libfontconfig1:arm64. 184s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 184s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 184s Selecting previously unselected package fontconfig. 184s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 184s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 184s Selecting previously unselected package fonts-glyphicons-halflings. 184s Preparing to unpack .../005-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 184s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 184s Selecting previously unselected package fonts-mathjax. 184s Preparing to unpack .../006-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 184s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 185s Selecting previously unselected package libblas3:arm64. 185s Preparing to unpack .../007-libblas3_3.12.0-4_arm64.deb ... 185s Unpacking libblas3:arm64 (3.12.0-4) ... 185s Selecting previously unselected package libpixman-1-0:arm64. 185s Preparing to unpack .../008-libpixman-1-0_0.44.0-3_arm64.deb ... 185s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 185s Selecting previously unselected package libxcb-render0:arm64. 185s Preparing to unpack .../009-libxcb-render0_1.17.0-2_arm64.deb ... 185s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 185s Selecting previously unselected package libxcb-shm0:arm64. 185s Preparing to unpack .../010-libxcb-shm0_1.17.0-2_arm64.deb ... 185s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 185s Selecting previously unselected package libxrender1:arm64. 185s Preparing to unpack .../011-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 185s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 185s Selecting previously unselected package libcairo2:arm64. 185s Preparing to unpack .../012-libcairo2_1.18.2-2_arm64.deb ... 185s Unpacking libcairo2:arm64 (1.18.2-2) ... 185s Selecting previously unselected package libdatrie1:arm64. 185s Preparing to unpack .../013-libdatrie1_0.2.13-3build1_arm64.deb ... 185s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 185s Selecting previously unselected package libdeflate0:arm64. 185s Preparing to unpack .../014-libdeflate0_1.22-1_arm64.deb ... 185s Unpacking libdeflate0:arm64 (1.22-1) ... 185s Selecting previously unselected package libgfortran5:arm64. 185s Preparing to unpack .../015-libgfortran5_14.2.0-12ubuntu1_arm64.deb ... 185s Unpacking libgfortran5:arm64 (14.2.0-12ubuntu1) ... 185s Selecting previously unselected package libgomp1:arm64. 185s Preparing to unpack .../016-libgomp1_14.2.0-12ubuntu1_arm64.deb ... 185s Unpacking libgomp1:arm64 (14.2.0-12ubuntu1) ... 185s Selecting previously unselected package libgraphite2-3:arm64. 185s Preparing to unpack .../017-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 185s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 185s Selecting previously unselected package libharfbuzz0b:arm64. 185s Preparing to unpack .../018-libharfbuzz0b_10.1.0-1_arm64.deb ... 185s Unpacking libharfbuzz0b:arm64 (10.1.0-1) ... 185s Selecting previously unselected package x11-common. 185s Preparing to unpack .../019-x11-common_1%3a7.7+23ubuntu3_all.deb ... 185s Unpacking x11-common (1:7.7+23ubuntu3) ... 185s Selecting previously unselected package libice6:arm64. 185s Preparing to unpack .../020-libice6_2%3a1.1.1-1_arm64.deb ... 185s Unpacking libice6:arm64 (2:1.1.1-1) ... 185s Selecting previously unselected package libjpeg-turbo8:arm64. 185s Preparing to unpack .../021-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 185s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 185s Selecting previously unselected package libjpeg8:arm64. 185s Preparing to unpack .../022-libjpeg8_8c-2ubuntu11_arm64.deb ... 185s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 185s Selecting previously unselected package libjs-bootstrap. 185s Preparing to unpack .../023-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 185s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 185s Selecting previously unselected package libjs-highlight.js. 185s Preparing to unpack .../024-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 185s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 185s Selecting previously unselected package libjs-jquery. 185s Preparing to unpack .../025-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 185s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 185s Selecting previously unselected package libjs-jquery-datatables. 185s Preparing to unpack .../026-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 185s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 185s Selecting previously unselected package liblapack3:arm64. 185s Preparing to unpack .../027-liblapack3_3.12.0-4_arm64.deb ... 185s Unpacking liblapack3:arm64 (3.12.0-4) ... 185s Selecting previously unselected package liblerc4:arm64. 185s Preparing to unpack .../028-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 185s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 186s Selecting previously unselected package libthai-data. 186s Preparing to unpack .../029-libthai-data_0.1.29-2build1_all.deb ... 186s Unpacking libthai-data (0.1.29-2build1) ... 186s Selecting previously unselected package libthai0:arm64. 186s Preparing to unpack .../030-libthai0_0.1.29-2build1_arm64.deb ... 186s Unpacking libthai0:arm64 (0.1.29-2build1) ... 186s Selecting previously unselected package libpango-1.0-0:arm64. 186s Preparing to unpack .../031-libpango-1.0-0_1.55.0+ds-3_arm64.deb ... 186s Unpacking libpango-1.0-0:arm64 (1.55.0+ds-3) ... 186s Selecting previously unselected package libpangoft2-1.0-0:arm64. 186s Preparing to unpack .../032-libpangoft2-1.0-0_1.55.0+ds-3_arm64.deb ... 186s Unpacking libpangoft2-1.0-0:arm64 (1.55.0+ds-3) ... 186s Selecting previously unselected package libpangocairo-1.0-0:arm64. 186s Preparing to unpack .../033-libpangocairo-1.0-0_1.55.0+ds-3_arm64.deb ... 186s Unpacking libpangocairo-1.0-0:arm64 (1.55.0+ds-3) ... 186s Selecting previously unselected package libpaper2:arm64. 186s Preparing to unpack .../034-libpaper2_2.2.5-0.3_arm64.deb ... 186s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 186s Selecting previously unselected package libpaper-utils. 186s Preparing to unpack .../035-libpaper-utils_2.2.5-0.3_arm64.deb ... 186s Unpacking libpaper-utils (2.2.5-0.3) ... 186s Selecting previously unselected package libsharpyuv0:arm64. 186s Preparing to unpack .../036-libsharpyuv0_1.4.0-0.1_arm64.deb ... 186s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 186s Selecting previously unselected package libsm6:arm64. 186s Preparing to unpack .../037-libsm6_2%3a1.2.4-1_arm64.deb ... 186s Unpacking libsm6:arm64 (2:1.2.4-1) ... 186s Selecting previously unselected package libtcl8.6:arm64. 186s Preparing to unpack .../038-libtcl8.6_8.6.15+dfsg-2_arm64.deb ... 186s Unpacking libtcl8.6:arm64 (8.6.15+dfsg-2) ... 186s Selecting previously unselected package libjbig0:arm64. 186s Preparing to unpack .../039-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 186s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 186s Selecting previously unselected package libwebp7:arm64. 186s Preparing to unpack .../040-libwebp7_1.4.0-0.1_arm64.deb ... 186s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 186s Selecting previously unselected package libtiff6:arm64. 186s Preparing to unpack .../041-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 186s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 186s Selecting previously unselected package libxft2:arm64. 186s Preparing to unpack .../042-libxft2_2.3.6-1build1_arm64.deb ... 186s Unpacking libxft2:arm64 (2.3.6-1build1) ... 186s Selecting previously unselected package libxss1:arm64. 186s Preparing to unpack .../043-libxss1_1%3a1.2.3-1build3_arm64.deb ... 186s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 186s Selecting previously unselected package libtk8.6:arm64. 186s Preparing to unpack .../044-libtk8.6_8.6.15-1_arm64.deb ... 186s Unpacking libtk8.6:arm64 (8.6.15-1) ... 186s Selecting previously unselected package libxt6t64:arm64. 186s Preparing to unpack .../045-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 186s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 186s Selecting previously unselected package node-html5shiv. 186s Preparing to unpack .../046-node-html5shiv_3.7.3+dfsg-5_all.deb ... 186s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 186s Selecting previously unselected package node-normalize.css. 186s Preparing to unpack .../047-node-normalize.css_8.0.1-5_all.deb ... 186s Unpacking node-normalize.css (8.0.1-5) ... 186s Selecting previously unselected package zip. 186s Preparing to unpack .../048-zip_3.0-14ubuntu1_arm64.deb ... 186s Unpacking zip (3.0-14ubuntu1) ... 186s Selecting previously unselected package unzip. 186s Preparing to unpack .../049-unzip_6.0-28ubuntu6_arm64.deb ... 186s Unpacking unzip (6.0-28ubuntu6) ... 186s Selecting previously unselected package xdg-utils. 186s Preparing to unpack .../050-xdg-utils_1.2.1-0ubuntu1_all.deb ... 186s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 186s Selecting previously unselected package r-base-core. 186s Preparing to unpack .../051-r-base-core_4.4.2-1_arm64.deb ... 186s Unpacking r-base-core (4.4.2-1) ... 187s Selecting previously unselected package r-cran-sys. 187s Preparing to unpack .../052-r-cran-sys_3.4.3-1_arm64.deb ... 187s Unpacking r-cran-sys (3.4.3-1) ... 187s Selecting previously unselected package r-cran-askpass. 187s Preparing to unpack .../053-r-cran-askpass_1.2.1-1_arm64.deb ... 187s Unpacking r-cran-askpass (1.2.1-1) ... 187s Selecting previously unselected package r-cran-cli. 187s Preparing to unpack .../054-r-cran-cli_3.6.3-1_arm64.deb ... 187s Unpacking r-cran-cli (3.6.3-1) ... 187s Selecting previously unselected package r-cran-colorspace. 187s Preparing to unpack .../055-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 187s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 187s Selecting previously unselected package r-cran-digest. 187s Preparing to unpack .../056-r-cran-digest_0.6.37-1_arm64.deb ... 187s Unpacking r-cran-digest (0.6.37-1) ... 187s Selecting previously unselected package r-cran-jsonlite. 187s Preparing to unpack .../057-r-cran-jsonlite_1.8.9+dfsg-1_arm64.deb ... 187s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 187s Selecting previously unselected package r-cran-lazyeval. 187s Preparing to unpack .../058-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 187s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 187s Selecting previously unselected package r-cran-rex. 187s Preparing to unpack .../059-r-cran-rex_1.2.1-1_all.deb ... 187s Unpacking r-cran-rex (1.2.1-1) ... 187s Selecting previously unselected package r-cran-curl. 187s Preparing to unpack .../060-r-cran-curl_5.2.3+dfsg-1ubuntu1_arm64.deb ... 187s Unpacking r-cran-curl (5.2.3+dfsg-1ubuntu1) ... 187s Selecting previously unselected package r-cran-mime. 187s Preparing to unpack .../061-r-cran-mime_0.12-2_arm64.deb ... 187s Unpacking r-cran-mime (0.12-2) ... 187s Selecting previously unselected package r-cran-openssl. 187s Preparing to unpack .../062-r-cran-openssl_2.2.0+dfsg-1_arm64.deb ... 187s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 187s Selecting previously unselected package r-cran-r6. 187s Preparing to unpack .../063-r-cran-r6_2.5.1-1_all.deb ... 187s Unpacking r-cran-r6 (2.5.1-1) ... 187s Selecting previously unselected package r-cran-httr. 187s Preparing to unpack .../064-r-cran-httr_1.4.7+dfsg-1_all.deb ... 187s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 187s Selecting previously unselected package r-cran-crayon. 187s Preparing to unpack .../065-r-cran-crayon_1.5.2-1_all.deb ... 187s Unpacking r-cran-crayon (1.5.2-1) ... 187s Selecting previously unselected package r-cran-withr. 187s Preparing to unpack .../066-r-cran-withr_3.0.2+dfsg-1_all.deb ... 187s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 187s Selecting previously unselected package r-cran-yaml. 187s Preparing to unpack .../067-r-cran-yaml_2.3.10-1_arm64.deb ... 187s Unpacking r-cran-yaml (2.3.10-1) ... 187s Selecting previously unselected package r-cran-covr. 187s Preparing to unpack .../068-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 187s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 188s Selecting previously unselected package r-cran-evaluate. 188s Preparing to unpack .../069-r-cran-evaluate_1.0.0-1_all.deb ... 188s Unpacking r-cran-evaluate (1.0.0-1) ... 188s Selecting previously unselected package r-cran-fansi. 188s Preparing to unpack .../070-r-cran-fansi_1.0.5-1_arm64.deb ... 188s Unpacking r-cran-fansi (1.0.5-1) ... 188s Selecting previously unselected package r-cran-farver. 188s Preparing to unpack .../071-r-cran-farver_2.1.2-1_arm64.deb ... 188s Unpacking r-cran-farver (2.1.2-1) ... 188s Selecting previously unselected package r-cran-lattice. 188s Preparing to unpack .../072-r-cran-lattice_0.22-6-1_arm64.deb ... 188s Unpacking r-cran-lattice (0.22-6-1) ... 188s Selecting previously unselected package r-cran-matrix. 188s Preparing to unpack .../073-r-cran-matrix_1.7-1-1_arm64.deb ... 188s Unpacking r-cran-matrix (1.7-1-1) ... 188s Selecting previously unselected package r-cran-survival. 188s Preparing to unpack .../074-r-cran-survival_3.8-3-1_arm64.deb ... 188s Unpacking r-cran-survival (3.8-3-1) ... 188s Selecting previously unselected package r-cran-gbm. 188s Preparing to unpack .../075-r-cran-gbm_2.2.2-1_arm64.deb ... 188s Unpacking r-cran-gbm (2.2.2-1) ... 188s Selecting previously unselected package r-cran-glue. 188s Preparing to unpack .../076-r-cran-glue_1.8.0-1_arm64.deb ... 188s Unpacking r-cran-glue (1.8.0-1) ... 188s Selecting previously unselected package r-cran-rlang. 188s Preparing to unpack .../077-r-cran-rlang_1.1.4-1_arm64.deb ... 188s Unpacking r-cran-rlang (1.1.4-1) ... 188s Selecting previously unselected package r-cran-lifecycle. 188s Preparing to unpack .../078-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 188s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 188s Selecting previously unselected package r-cran-gtable. 188s Preparing to unpack .../079-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 188s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 188s Selecting previously unselected package r-cran-isoband. 188s Preparing to unpack .../080-r-cran-isoband_0.2.7-1_arm64.deb ... 188s Unpacking r-cran-isoband (0.2.7-1) ... 188s Selecting previously unselected package r-cran-mass. 188s Preparing to unpack .../081-r-cran-mass_7.3-63-1_arm64.deb ... 188s Unpacking r-cran-mass (7.3-63-1) ... 188s Selecting previously unselected package r-cran-nlme. 188s Preparing to unpack .../082-r-cran-nlme_3.1.166-1_arm64.deb ... 188s Unpacking r-cran-nlme (3.1.166-1) ... 188s Selecting previously unselected package r-cran-mgcv. 188s Preparing to unpack .../083-r-cran-mgcv_1.9-1-1_arm64.deb ... 188s Unpacking r-cran-mgcv (1.9-1-1) ... 188s Selecting previously unselected package r-cran-labeling. 188s Preparing to unpack .../084-r-cran-labeling_0.4.3-1_all.deb ... 188s Unpacking r-cran-labeling (0.4.3-1) ... 188s Selecting previously unselected package r-cran-munsell. 188s Preparing to unpack .../085-r-cran-munsell_0.5.1-1_all.deb ... 188s Unpacking r-cran-munsell (0.5.1-1) ... 188s Selecting previously unselected package r-cran-rcolorbrewer. 188s Preparing to unpack .../086-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 188s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 188s Selecting previously unselected package r-cran-viridislite. 188s Preparing to unpack .../087-r-cran-viridislite_0.4.2-2_all.deb ... 188s Unpacking r-cran-viridislite (0.4.2-2) ... 188s Selecting previously unselected package r-cran-scales. 188s Preparing to unpack .../088-r-cran-scales_1.3.0-1_all.deb ... 188s Unpacking r-cran-scales (1.3.0-1) ... 188s Selecting previously unselected package r-cran-magrittr. 188s Preparing to unpack .../089-r-cran-magrittr_2.0.3-1_arm64.deb ... 188s Unpacking r-cran-magrittr (2.0.3-1) ... 189s Selecting previously unselected package r-cran-utf8. 189s Preparing to unpack .../090-r-cran-utf8_1.2.4-1_arm64.deb ... 189s Unpacking r-cran-utf8 (1.2.4-1) ... 189s Selecting previously unselected package r-cran-vctrs. 189s Preparing to unpack .../091-r-cran-vctrs_0.6.5-1_arm64.deb ... 189s Unpacking r-cran-vctrs (0.6.5-1) ... 189s Selecting previously unselected package r-cran-pillar. 189s Preparing to unpack .../092-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 189s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 189s Selecting previously unselected package r-cran-pkgconfig. 189s Preparing to unpack .../093-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 189s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 189s Selecting previously unselected package r-cran-tibble. 189s Preparing to unpack .../094-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 189s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 189s Selecting previously unselected package r-cran-ggplot2. 189s Preparing to unpack .../095-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 189s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 189s Selecting previously unselected package r-cran-gridextra. 189s Preparing to unpack .../096-r-cran-gridextra_2.3-3build1_all.deb ... 189s Unpacking r-cran-gridextra (2.3-3build1) ... 189s Selecting previously unselected package r-cran-xfun. 189s Preparing to unpack .../097-r-cran-xfun_0.49+dfsg-1_arm64.deb ... 189s Unpacking r-cran-xfun (0.49+dfsg-1) ... 189s Selecting previously unselected package r-cran-highr. 189s Preparing to unpack .../098-r-cran-highr_0.11+dfsg-1_all.deb ... 189s Unpacking r-cran-highr (0.11+dfsg-1) ... 189s Selecting previously unselected package libjs-mathjax. 189s Preparing to unpack .../099-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 189s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 190s Selecting previously unselected package r-cran-knitr. 190s Preparing to unpack .../100-r-cran-knitr_1.49+dfsg-1_all.deb ... 190s Unpacking r-cran-knitr (1.49+dfsg-1) ... 190s Selecting previously unselected package r-cran-runit. 190s Preparing to unpack .../101-r-cran-runit_0.4.33-1_all.deb ... 190s Unpacking r-cran-runit (0.4.33-1) ... 190s Selecting previously unselected package r-cran-tinytest. 190s Preparing to unpack .../102-r-cran-tinytest_1.4.1-1_all.deb ... 190s Unpacking r-cran-tinytest (1.4.1-1) ... 190s Selecting previously unselected package r-cran-viridis. 190s Preparing to unpack .../103-r-cran-viridis_0.6.5-1_all.deb ... 190s Unpacking r-cran-viridis (0.6.5-1) ... 190s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 190s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 190s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 190s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 190s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 190s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 190s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 190s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 190s Setting up libxcb-render0:arm64 (1.17.0-2) ... 190s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 190s Setting up unzip (6.0-28ubuntu6) ... 190s Setting up x11-common (1:7.7+23ubuntu3) ... 190s Setting up node-html5shiv (3.7.3+dfsg-5) ... 190s Setting up libdeflate0:arm64 (1.22-1) ... 190s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 190s Setting up libgomp1:arm64 (14.2.0-12ubuntu1) ... 190s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 190s Setting up zip (3.0-14ubuntu1) ... 190s Setting up libblas3:arm64 (3.12.0-4) ... 190s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 190s Setting up fonts-dejavu-mono (2.37-8) ... 190s Setting up libtcl8.6:arm64 (8.6.15+dfsg-2) ... 190s Setting up fonts-dejavu-core (2.37-8) ... 190s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 190s Setting up libgfortran5:arm64 (14.2.0-12ubuntu1) ... 190s Setting up libwebp7:arm64 (1.4.0-0.1) ... 190s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 190s Setting up libharfbuzz0b:arm64 (10.1.0-1) ... 190s Setting up libthai-data (0.1.29-2build1) ... 190s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 190s Setting up libpaper2:arm64 (2.2.5-0.3) ... 190s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 190s Setting up node-normalize.css (8.0.1-5) ... 190s Setting up xdg-utils (1.2.1-0ubuntu1) ... 190s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 190s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 190s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 190s Setting up libice6:arm64 (2:1.1.1-1) ... 190s Setting up liblapack3:arm64 (3.12.0-4) ... 190s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 190s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 191s Setting up libpaper-utils (2.2.5-0.3) ... 191s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 191s Setting up libthai0:arm64 (0.1.29-2build1) ... 191s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 191s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 191s Setting up libsm6:arm64 (2:1.2.4-1) ... 191s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 193s Regenerating fonts cache... done. 193s Setting up libxft2:arm64 (2.3.6-1build1) ... 193s Setting up libtk8.6:arm64 (8.6.15-1) ... 193s Setting up libpango-1.0-0:arm64 (1.55.0+ds-3) ... 193s Setting up libcairo2:arm64 (1.18.2-2) ... 193s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 193s Setting up libpangoft2-1.0-0:arm64 (1.55.0+ds-3) ... 193s Setting up libpangocairo-1.0-0:arm64 (1.55.0+ds-3) ... 193s Setting up r-base-core (4.4.2-1) ... 193s Creating config file /etc/R/Renviron with new version 193s Setting up r-cran-crayon (1.5.2-1) ... 193s Setting up r-cran-labeling (0.4.3-1) ... 193s Setting up r-cran-lattice (0.22-6-1) ... 193s Setting up r-cran-tinytest (1.4.1-1) ... 193s Setting up r-cran-nlme (3.1.166-1) ... 193s Setting up r-cran-farver (2.1.2-1) ... 193s Setting up r-cran-viridislite (0.4.2-2) ... 193s Setting up r-cran-lazyeval (0.2.2-1build1) ... 193s Setting up r-cran-r6 (2.5.1-1) ... 193s Setting up r-cran-magrittr (2.0.3-1) ... 193s Setting up r-cran-curl (5.2.3+dfsg-1ubuntu1) ... 193s Setting up r-cran-rlang (1.1.4-1) ... 193s Setting up r-cran-xfun (0.49+dfsg-1) ... 193s Setting up r-cran-sys (3.4.3-1) ... 193s Setting up r-cran-withr (3.0.2+dfsg-1) ... 193s Setting up r-cran-mime (0.12-2) ... 193s Setting up r-cran-digest (0.6.37-1) ... 193s Setting up r-cran-yaml (2.3.10-1) ... 193s Setting up r-cran-evaluate (1.0.0-1) ... 193s Setting up r-cran-highr (0.11+dfsg-1) ... 193s Setting up r-cran-fansi (1.0.5-1) ... 193s Setting up r-cran-mass (7.3-63-1) ... 193s Setting up r-cran-glue (1.8.0-1) ... 193s Setting up r-cran-cli (3.6.3-1) ... 193s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 193s Setting up r-cran-askpass (1.2.1-1) ... 193s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ... 193s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 193s Setting up r-cran-utf8 (1.2.4-1) ... 193s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 193s Setting up r-cran-rex (1.2.1-1) ... 193s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 193s Setting up r-cran-isoband (0.2.7-1) ... 193s Setting up r-cran-runit (0.4.33-1) ... 193s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 193s Setting up r-cran-matrix (1.7-1-1) ... 193s Setting up r-cran-knitr (1.49+dfsg-1) ... 193s Setting up r-cran-mgcv (1.9-1-1) ... 193s Setting up r-cran-vctrs (0.6.5-1) ... 193s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 193s Setting up r-cran-openssl (2.2.0+dfsg-1) ... 193s Setting up r-cran-munsell (0.5.1-1) ... 193s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 193s Setting up r-cran-survival (3.8-3-1) ... 193s Setting up r-cran-httr (1.4.7+dfsg-1) ... 193s Setting up r-cran-gridextra (2.3-3build1) ... 193s Setting up r-cran-scales (1.3.0-1) ... 193s Setting up r-cran-covr (3.6.4+dfsg-1) ... 193s Setting up r-cran-gbm (2.2.2-1) ... 193s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 193s Setting up r-cran-viridis (0.6.5-1) ... 193s Processing triggers for libc-bin (2.40-4ubuntu1) ... 193s Processing triggers for man-db (2.13.0-1) ... 194s Processing triggers for install-info (7.1.1-1) ... 195s autopkgtest [13:58:07]: test run-unit-test: [----------------------- 196s BEGIN TEST tinytest.R 196s 196s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 196s Copyright (C) 2024 The R Foundation for Statistical Computing 196s Platform: aarch64-unknown-linux-gnu 196s 196s R is free software and comes with ABSOLUTELY NO WARRANTY. 196s You are welcome to redistribute it under certain conditions. 196s Type 'license()' or 'licence()' for distribution details. 196s 196s R is a collaborative project with many contributors. 196s Type 'contributors()' for more information and 196s 'citation()' on how to cite R or R packages in publications. 196s 196s Type 'demo()' for some demos, 'help()' for on-line help, or 196s 'help.start()' for an HTML browser interface to help. 196s Type 'q()' to quit R. 196s 196s > 196s > if ( requireNamespace("tinytest", quietly = TRUE) ){ 196s + home <- length(unclass(packageVersion("gbm"))[[1L]]) == 4 196s + tinytest::test_package("gbm", at_home = home) 196s + } 197s Loaded gbm 2.2.2 197s This version of gbm is no longer under development. Consider transitioning to gbm3, https://github.com/gbm-developers/gbm3 197s test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests CV: 1 197s CV: 2 197s CV: 3 198s CV: 4 198s CV: 5 199s test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 1 tests OK 1.8s 199s test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests CV: 1 199s CV: 2 200s CV: 3 201s CV: 4 202s CV: 5 204s test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 1 tests OK 5.4s 204s test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests CV: 1 204s CV: 2 205s CV: 3 205s CV: 4 206s CV: 5 206s CV: 6 207s CV: 7 207s CV: 8 208s CV: 9 208s CV: 10 209s test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 1 tests 1 fails test_least_squares.R.......... 2 tests 2 fails 5.1s 209s test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests Distribution not specified, assuming bernoulli ... 209s CV: 1 210s CV: 2 211s CV: 3 212s CV: 4 213s CV: 5 216s test_relative_influence.R..... 0 tests n.trees not given. Using 1000 trees. 216s test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 1 tests OK 6.9s 216s ----- FAILED[data]: test_least_squares.R<68--69> 216s call| expect_true(abs(mean(data2$Y - f.predict)) < 0.01, info = "LS: checking if Gaussian absolute error within tolerance.") 216s diff| Expected TRUE, got FALSE 216s info| LS: checking if Gaussian absolute error within tolerance. 216s ----- FAILED[data]: test_least_squares.R<70--71> 216s call| expect_true(sd(data2$Y - f.predict) < sigma, info = "LS: checking if Gaussian squared error within tolerance.") 216s diff| Expected TRUE, got FALSE 216s info| LS: checking if Gaussian squared error within tolerance. 216s Error: 2 out of 5 tests failed 216s Execution halted 216s autopkgtest [13:58:28]: test run-unit-test: -----------------------] 217s run-unit-test FAIL non-zero exit status 1 217s autopkgtest [13:58:29]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 217s autopkgtest [13:58:29]: test pkg-r-autopkgtest: preparing testbed 217s Reading package lists... 218s Building dependency tree... 218s Reading state information... 218s Starting pkgProblemResolver with broken count: 0 218s Starting 2 pkgProblemResolver with broken count: 0 218s Done 219s The following NEW packages will be installed: 219s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 219s dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 219s gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 219s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 219s libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 219s libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 219s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 219s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 219s libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev 219s libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev 219s zlib1g-dev 219s 0 upgraded, 54 newly installed, 0 to remove and 0 not upgraded. 219s Need to get 92.0 MB of archives. 219s After this operation, 331 MB of additional disk space will be used. 219s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 220s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 220s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-12ubuntu1 [10.6 MB] 223s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-12ubuntu1 [1032 B] 223s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B] 223s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB] 223s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-12ubuntu1 [49.6 kB] 223s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-12ubuntu1 [27.7 kB] 223s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-12ubuntu1 [2896 kB] 224s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-12ubuntu1 [1283 kB] 224s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-12ubuntu1 [2687 kB] 225s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-12ubuntu1 [1152 kB] 225s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-12ubuntu1 [1598 kB] 226s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-12ubuntu1 [2596 kB] 226s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-12ubuntu1 [20.9 MB] 231s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-12ubuntu1 [522 kB] 231s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B] 231s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B] 231s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-12ubuntu1 [2500 kB] 232s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-12ubuntu1 [12.1 MB] 234s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-12ubuntu1 [20.2 kB] 234s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B] 234s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B] 234s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 234s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 234s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-12ubuntu1 [498 kB] 234s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-12ubuntu1 [11.4 MB] 235s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-12ubuntu1 [13.1 kB] 235s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1022 B] 235s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.1.0-2ubuntu1 [1162 B] 235s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 74.2-1ubuntu4 [210 kB] 235s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.0-4 [120 kB] 235s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 235s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.22-1 [53.8 kB] 235s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 74.2-1ubuntu4 [11.9 MB] 236s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 236s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 236s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 236s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.0-4 [4419 kB] 236s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5-2 [385 kB] 236s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB] 236s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu3 [187 kB] 236s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu3 [6704 B] 236s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.42-4ubuntu3 [694 kB] 236s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 236s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 236s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.44-3 [270 kB] 236s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 236s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.3-1 [180 kB] 236s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 236s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 237s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 237s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.2-1 [4340 B] 237s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 237s Fetched 92.0 MB in 18s (5185 kB/s) 237s Selecting previously unselected package libisl23:arm64. 237s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 91825 files and directories currently installed.) 237s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ... 237s Unpacking libisl23:arm64 (0.27-1) ... 237s Selecting previously unselected package libmpc3:arm64. 237s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ... 237s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 237s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 237s Preparing to unpack .../02-cpp-14-aarch64-linux-gnu_14.2.0-12ubuntu1_arm64.deb ... 237s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-12ubuntu1) ... 237s Selecting previously unselected package cpp-14. 237s Preparing to unpack .../03-cpp-14_14.2.0-12ubuntu1_arm64.deb ... 237s Unpacking cpp-14 (14.2.0-12ubuntu1) ... 237s Selecting previously unselected package cpp-aarch64-linux-gnu. 237s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 237s Unpacking cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 237s Selecting previously unselected package cpp. 237s Preparing to unpack .../05-cpp_4%3a14.1.0-2ubuntu1_arm64.deb ... 237s Unpacking cpp (4:14.1.0-2ubuntu1) ... 237s Selecting previously unselected package libcc1-0:arm64. 237s Preparing to unpack .../06-libcc1-0_14.2.0-12ubuntu1_arm64.deb ... 237s Unpacking libcc1-0:arm64 (14.2.0-12ubuntu1) ... 237s Selecting previously unselected package libitm1:arm64. 237s Preparing to unpack .../07-libitm1_14.2.0-12ubuntu1_arm64.deb ... 237s Unpacking libitm1:arm64 (14.2.0-12ubuntu1) ... 237s Selecting previously unselected package libasan8:arm64. 238s Preparing to unpack .../08-libasan8_14.2.0-12ubuntu1_arm64.deb ... 238s Unpacking libasan8:arm64 (14.2.0-12ubuntu1) ... 238s Selecting previously unselected package liblsan0:arm64. 238s Preparing to unpack .../09-liblsan0_14.2.0-12ubuntu1_arm64.deb ... 238s Unpacking liblsan0:arm64 (14.2.0-12ubuntu1) ... 238s Selecting previously unselected package libtsan2:arm64. 238s Preparing to unpack .../10-libtsan2_14.2.0-12ubuntu1_arm64.deb ... 238s Unpacking libtsan2:arm64 (14.2.0-12ubuntu1) ... 238s Selecting previously unselected package libubsan1:arm64. 238s Preparing to unpack .../11-libubsan1_14.2.0-12ubuntu1_arm64.deb ... 238s Unpacking libubsan1:arm64 (14.2.0-12ubuntu1) ... 238s Selecting previously unselected package libhwasan0:arm64. 238s Preparing to unpack .../12-libhwasan0_14.2.0-12ubuntu1_arm64.deb ... 238s Unpacking libhwasan0:arm64 (14.2.0-12ubuntu1) ... 238s Selecting previously unselected package libgcc-14-dev:arm64. 238s Preparing to unpack .../13-libgcc-14-dev_14.2.0-12ubuntu1_arm64.deb ... 238s Unpacking libgcc-14-dev:arm64 (14.2.0-12ubuntu1) ... 238s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 238s Preparing to unpack .../14-gcc-14-aarch64-linux-gnu_14.2.0-12ubuntu1_arm64.deb ... 238s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-12ubuntu1) ... 238s Selecting previously unselected package gcc-14. 238s Preparing to unpack .../15-gcc-14_14.2.0-12ubuntu1_arm64.deb ... 238s Unpacking gcc-14 (14.2.0-12ubuntu1) ... 238s Selecting previously unselected package gcc-aarch64-linux-gnu. 238s Preparing to unpack .../16-gcc-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 238s Unpacking gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 238s Selecting previously unselected package gcc. 239s Preparing to unpack .../17-gcc_4%3a14.1.0-2ubuntu1_arm64.deb ... 239s Unpacking gcc (4:14.1.0-2ubuntu1) ... 239s Selecting previously unselected package libstdc++-14-dev:arm64. 239s Preparing to unpack .../18-libstdc++-14-dev_14.2.0-12ubuntu1_arm64.deb ... 239s Unpacking libstdc++-14-dev:arm64 (14.2.0-12ubuntu1) ... 239s Selecting previously unselected package g++-14-aarch64-linux-gnu. 239s Preparing to unpack .../19-g++-14-aarch64-linux-gnu_14.2.0-12ubuntu1_arm64.deb ... 239s Unpacking g++-14-aarch64-linux-gnu (14.2.0-12ubuntu1) ... 239s Selecting previously unselected package g++-14. 239s Preparing to unpack .../20-g++-14_14.2.0-12ubuntu1_arm64.deb ... 239s Unpacking g++-14 (14.2.0-12ubuntu1) ... 239s Selecting previously unselected package g++-aarch64-linux-gnu. 239s Preparing to unpack .../21-g++-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 239s Unpacking g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 239s Selecting previously unselected package g++. 239s Preparing to unpack .../22-g++_4%3a14.1.0-2ubuntu1_arm64.deb ... 239s Unpacking g++ (4:14.1.0-2ubuntu1) ... 239s Selecting previously unselected package build-essential. 239s Preparing to unpack .../23-build-essential_12.10ubuntu1_arm64.deb ... 239s Unpacking build-essential (12.10ubuntu1) ... 239s Selecting previously unselected package dctrl-tools. 239s Preparing to unpack .../24-dctrl-tools_2.24-3build3_arm64.deb ... 239s Unpacking dctrl-tools (2.24-3build3) ... 239s Selecting previously unselected package libgfortran-14-dev:arm64. 239s Preparing to unpack .../25-libgfortran-14-dev_14.2.0-12ubuntu1_arm64.deb ... 239s Unpacking libgfortran-14-dev:arm64 (14.2.0-12ubuntu1) ... 239s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 239s Preparing to unpack .../26-gfortran-14-aarch64-linux-gnu_14.2.0-12ubuntu1_arm64.deb ... 239s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-12ubuntu1) ... 240s Selecting previously unselected package gfortran-14. 240s Preparing to unpack .../27-gfortran-14_14.2.0-12ubuntu1_arm64.deb ... 240s Unpacking gfortran-14 (14.2.0-12ubuntu1) ... 240s Selecting previously unselected package gfortran-aarch64-linux-gnu. 240s Preparing to unpack .../28-gfortran-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 240s Unpacking gfortran-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 240s Selecting previously unselected package gfortran. 240s Preparing to unpack .../29-gfortran_4%3a14.1.0-2ubuntu1_arm64.deb ... 240s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 240s Selecting previously unselected package icu-devtools. 240s Preparing to unpack .../30-icu-devtools_74.2-1ubuntu4_arm64.deb ... 240s Unpacking icu-devtools (74.2-1ubuntu4) ... 240s Selecting previously unselected package libblas-dev:arm64. 240s Preparing to unpack .../31-libblas-dev_3.12.0-4_arm64.deb ... 240s Unpacking libblas-dev:arm64 (3.12.0-4) ... 240s Selecting previously unselected package libbz2-dev:arm64. 240s Preparing to unpack .../32-libbz2-dev_1.0.8-6_arm64.deb ... 240s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 240s Selecting previously unselected package libdeflate-dev:arm64. 240s Preparing to unpack .../33-libdeflate-dev_1.22-1_arm64.deb ... 240s Unpacking libdeflate-dev:arm64 (1.22-1) ... 240s Selecting previously unselected package libicu-dev:arm64. 240s Preparing to unpack .../34-libicu-dev_74.2-1ubuntu4_arm64.deb ... 240s Unpacking libicu-dev:arm64 (74.2-1ubuntu4) ... 240s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 240s Preparing to unpack .../35-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 240s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 240s Selecting previously unselected package libjpeg8-dev:arm64. 240s Preparing to unpack .../36-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 240s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 240s Selecting previously unselected package libjpeg-dev:arm64. 240s Preparing to unpack .../37-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 240s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 240s Selecting previously unselected package liblapack-dev:arm64. 240s Preparing to unpack .../38-liblapack-dev_3.12.0-4_arm64.deb ... 240s Unpacking liblapack-dev:arm64 (3.12.0-4) ... 240s Selecting previously unselected package libncurses-dev:arm64. 240s Preparing to unpack .../39-libncurses-dev_6.5-2_arm64.deb ... 240s Unpacking libncurses-dev:arm64 (6.5-2) ... 240s Selecting previously unselected package libpcre2-16-0:arm64. 240s Preparing to unpack .../40-libpcre2-16-0_10.42-4ubuntu3_arm64.deb ... 240s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu3) ... 240s Selecting previously unselected package libpcre2-32-0:arm64. 240s Preparing to unpack .../41-libpcre2-32-0_10.42-4ubuntu3_arm64.deb ... 240s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu3) ... 240s Selecting previously unselected package libpcre2-posix3:arm64. 241s Preparing to unpack .../42-libpcre2-posix3_10.42-4ubuntu3_arm64.deb ... 241s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu3) ... 241s Selecting previously unselected package libpcre2-dev:arm64. 241s Preparing to unpack .../43-libpcre2-dev_10.42-4ubuntu3_arm64.deb ... 241s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu3) ... 241s Selecting previously unselected package libpkgconf3:arm64. 241s Preparing to unpack .../44-libpkgconf3_1.8.1-4_arm64.deb ... 241s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 241s Selecting previously unselected package zlib1g-dev:arm64. 241s Preparing to unpack .../45-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 241s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 241s Selecting previously unselected package libpng-dev:arm64. 241s Preparing to unpack .../46-libpng-dev_1.6.44-3_arm64.deb ... 241s Unpacking libpng-dev:arm64 (1.6.44-3) ... 241s Selecting previously unselected package libreadline-dev:arm64. 241s Preparing to unpack .../47-libreadline-dev_8.2-6_arm64.deb ... 241s Unpacking libreadline-dev:arm64 (8.2-6) ... 241s Selecting previously unselected package liblzma-dev:arm64. 241s Preparing to unpack .../48-liblzma-dev_5.6.3-1_arm64.deb ... 241s Unpacking liblzma-dev:arm64 (5.6.3-1) ... 241s Selecting previously unselected package pkgconf-bin. 241s Preparing to unpack .../49-pkgconf-bin_1.8.1-4_arm64.deb ... 241s Unpacking pkgconf-bin (1.8.1-4) ... 241s Selecting previously unselected package pkgconf:arm64. 241s Preparing to unpack .../50-pkgconf_1.8.1-4_arm64.deb ... 241s Unpacking pkgconf:arm64 (1.8.1-4) ... 241s Selecting previously unselected package libtirpc-dev:arm64. 241s Preparing to unpack .../51-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 241s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 241s Selecting previously unselected package r-base-dev. 241s Preparing to unpack .../52-r-base-dev_4.4.2-1_all.deb ... 241s Unpacking r-base-dev (4.4.2-1) ... 241s Selecting previously unselected package pkg-r-autopkgtest. 241s Preparing to unpack .../53-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 241s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 241s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 241s Setting up libncurses-dev:arm64 (6.5-2) ... 241s Setting up libreadline-dev:arm64 (8.2-6) ... 241s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu3) ... 241s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu3) ... 241s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 241s Setting up libpkgconf3:arm64 (1.8.1-4) ... 241s Setting up libmpc3:arm64 (1.3.1-1build2) ... 241s Setting up icu-devtools (74.2-1ubuntu4) ... 241s Setting up pkgconf-bin (1.8.1-4) ... 241s Setting up liblzma-dev:arm64 (5.6.3-1) ... 241s Setting up libubsan1:arm64 (14.2.0-12ubuntu1) ... 241s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 241s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu3) ... 241s Setting up libhwasan0:arm64 (14.2.0-12ubuntu1) ... 241s Setting up libasan8:arm64 (14.2.0-12ubuntu1) ... 241s Setting up libtsan2:arm64 (14.2.0-12ubuntu1) ... 241s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 241s Setting up libisl23:arm64 (0.27-1) ... 241s Setting up libdeflate-dev:arm64 (1.22-1) ... 241s Setting up libicu-dev:arm64 (74.2-1ubuntu4) ... 241s Setting up libcc1-0:arm64 (14.2.0-12ubuntu1) ... 241s Setting up liblsan0:arm64 (14.2.0-12ubuntu1) ... 241s Setting up libblas-dev:arm64 (3.12.0-4) ... 241s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 241s Setting up dctrl-tools (2.24-3build3) ... 241s Setting up libitm1:arm64 (14.2.0-12ubuntu1) ... 241s Setting up libbz2-dev:arm64 (1.0.8-6) ... 241s Setting up libpcre2-dev:arm64 (10.42-4ubuntu3) ... 241s Setting up libpng-dev:arm64 (1.6.44-3) ... 241s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 241s Setting up pkgconf:arm64 (1.8.1-4) ... 241s Setting up liblapack-dev:arm64 (3.12.0-4) ... 241s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 241s Setting up cpp-14-aarch64-linux-gnu (14.2.0-12ubuntu1) ... 241s Setting up libgcc-14-dev:arm64 (14.2.0-12ubuntu1) ... 241s Setting up libstdc++-14-dev:arm64 (14.2.0-12ubuntu1) ... 241s Setting up libgfortran-14-dev:arm64 (14.2.0-12ubuntu1) ... 241s Setting up cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 241s Setting up cpp-14 (14.2.0-12ubuntu1) ... 241s Setting up cpp (4:14.1.0-2ubuntu1) ... 241s Setting up gcc-14-aarch64-linux-gnu (14.2.0-12ubuntu1) ... 241s Setting up gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 241s Setting up g++-14-aarch64-linux-gnu (14.2.0-12ubuntu1) ... 241s Setting up gcc-14 (14.2.0-12ubuntu1) ... 241s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-12ubuntu1) ... 241s Setting up g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 241s Setting up gfortran-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 241s Setting up g++-14 (14.2.0-12ubuntu1) ... 241s Setting up gfortran-14 (14.2.0-12ubuntu1) ... 241s Setting up gcc (4:14.1.0-2ubuntu1) ... 241s Setting up g++ (4:14.1.0-2ubuntu1) ... 241s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 241s Setting up build-essential (12.10ubuntu1) ... 241s Setting up gfortran (4:14.1.0-2ubuntu1) ... 241s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 241s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 241s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 241s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 241s Setting up r-base-dev (4.4.2-1) ... 241s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 241s Processing triggers for libc-bin (2.40-4ubuntu1) ... 241s Processing triggers for man-db (2.13.0-1) ... 242s Processing triggers for install-info (7.1.1-1) ... 243s autopkgtest [13:58:55]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 243s autopkgtest [13:58:55]: test pkg-r-autopkgtest: [----------------------- 243s Test: Try to load the R library gbm 243s 243s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 243s Copyright (C) 2024 The R Foundation for Statistical Computing 243s Platform: aarch64-unknown-linux-gnu 243s 243s R is free software and comes with ABSOLUTELY NO WARRANTY. 243s You are welcome to redistribute it under certain conditions. 243s Type 'license()' or 'licence()' for distribution details. 243s 243s R is a collaborative project with many contributors. 243s Type 'contributors()' for more information and 243s 'citation()' on how to cite R or R packages in publications. 243s 243s Type 'demo()' for some demos, 'help()' for on-line help, or 243s 'help.start()' for an HTML browser interface to help. 243s Type 'q()' to quit R. 243s 244s > library('gbm') 244s Loaded gbm 2.2.2 244s This version of gbm is no longer under development. Consider transitioning to gbm3, https://github.com/gbm-developers/gbm3 244s > 244s > 244s Other tests are currently unsupported! 244s They will be progressively added. 245s autopkgtest [13:58:57]: test pkg-r-autopkgtest: -----------------------] 245s pkg-r-autopkgtest PASS 245s autopkgtest [13:58:57]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 246s autopkgtest [13:58:58]: @@@@@@@@@@@@@@@@@@@@ summary 246s run-unit-test FAIL non-zero exit status 1 246s pkg-r-autopkgtest PASS 263s nova [W] Using flock in prodstack6-arm64 263s Creating nova instance adt-plucky-arm64-r-cran-gbm-20250109-135452-juju-7f2275-prod-proposed-migration-environment-15-b142698f-e4a0-45ca-86cc-1968c5001558 from image adt/ubuntu-plucky-arm64-server-20250108.img (UUID 053f5e9f-d810-4aac-9e57-cf8ac63865d2)... 263s nova [W] Timed out waiting for c07fc16f-c714-4f26-8c63-07da40759bbb to get deleted.