0s autopkgtest [10:05:19]: starting date and time: 2025-03-15 10:05:19+0000
  0s autopkgtest [10:05:19]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [10:05:19]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.a9bb0zmh/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-gam --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-8.secgroup --name adt-plucky-arm64-r-cran-gam-20250315-100518-juju-7f2275-prod-proposed-migration-environment-2-c8ee8996-2cb6-40f0-959f-e6f0023270d0 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
194s autopkgtest [10:08:33]: testbed dpkg architecture: arm64
194s autopkgtest [10:08:33]: testbed apt version: 2.9.33
195s autopkgtest [10:08:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup
195s autopkgtest [10:08:34]: testbed release detected to be: None
196s autopkgtest [10:08:35]: updating testbed package index (apt update)
196s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
197s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
197s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
197s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
197s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.9 kB]
197s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [437 kB]
197s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [51.3 kB]
197s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [83.0 kB]
198s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1576 B]
198s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B]
198s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [380 kB]
198s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [11.9 kB]
198s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [12.1 kB]
198s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [216 B]
198s Fetched 1120 kB in 2s (661 kB/s)
200s Reading package lists...
200s Reading package lists...
201s Building dependency tree...
201s Reading state information...
203s Calculating upgrade...
203s Calculating upgrade...
204s The following packages will be upgraded:
204s   python3-jinja2 strace
204s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
204s Need to get 608 kB of archives.
204s After this operation, 11.3 kB of additional disk space will be used.
204s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB]
205s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
206s Fetched 608 kB in 1s (583 kB/s)
207s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 117701 files and directories currently installed.)
207s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ...
207s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
207s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
207s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
207s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
207s Setting up strace (6.13+ds-1ubuntu1) ...
207s Processing triggers for man-db (2.13.0-1) ...
208s Reading package lists...
208s Building dependency tree...
208s Reading state information...
209s Solving dependencies...
209s 0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded.
210s autopkgtest [10:08:49]: upgrading testbed (apt dist-upgrade and autopurge)
210s Reading package lists...
210s Building dependency tree...
210s Reading state information...
212s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
212s Starting 2 pkgProblemResolver with broken count: 0
212s Done
213s Entering ResolveByKeep
213s 
214s Calculating upgrade...
214s The following packages will be upgraded:
214s   libc-bin libc-dev-bin libc6 libc6-dev locales
214s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
214s Need to get 9530 kB of archives.
214s After this operation, 0 B of additional disk space will be used.
214s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB]
217s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB]
217s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB]
220s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB]
221s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB]
227s Preconfiguring packages ...
227s Fetched 9530 kB in 12s (772 kB/s)
228s (Reading database ... 
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 117701 files and directories currently installed.)
228s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ...
228s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
228s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ...
228s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
228s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ...
228s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
228s Setting up libc6:arm64 (2.41-1ubuntu2) ...
229s (Reading database ... 
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 117701 files and directories currently installed.)
229s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ...
229s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
229s Setting up libc-bin (2.41-1ubuntu2) ...
229s (Reading database ... 
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 117701 files and directories currently installed.)
229s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
229s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
229s Setting up locales (2.41-1ubuntu2) ...
231s Generating locales (this might take a while)...
233s   en_US.UTF-8... done
233s Generation complete.
233s Setting up libc-dev-bin (2.41-1ubuntu2) ...
233s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ...
233s Processing triggers for man-db (2.13.0-1) ...
234s Processing triggers for systemd (257.3-1ubuntu3) ...
235s Reading package lists...
236s Building dependency tree...
236s Reading state information...
237s Starting pkgProblemResolver with broken count: 0
237s Starting 2 pkgProblemResolver with broken count: 0
237s Done
238s Solving dependencies...
239s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
243s autopkgtest [10:09:22]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025
243s autopkgtest [10:09:22]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-gam
245s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-gam 1.22-5-1 (dsc) [2096 B]
245s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-gam 1.22-5-1 (tar) [221 kB]
245s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-gam 1.22-5-1 (diff) [3740 B]
245s gpgv: Signature made Thu Oct  3 01:04:11 2024 UTC
245s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
245s gpgv:                issuer "plessy@debian.org"
245s gpgv: Can't check signature: No public key
245s dpkg-source: warning: cannot verify inline signature for ./r-cran-gam_1.22-5-1.dsc: no acceptable signature found
245s autopkgtest [10:09:24]: testing package r-cran-gam version 1.22-5-1
246s autopkgtest [10:09:25]: build not needed
249s autopkgtest [10:09:28]: test run-unit-test: preparing testbed
249s Reading package lists...
249s Building dependency tree...
249s Reading state information...
250s Starting pkgProblemResolver with broken count: 0
250s Starting 2 pkgProblemResolver with broken count: 0
250s Done
251s The following NEW packages will be installed:
251s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
251s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1
251s   libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8
251s   liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
251s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
251s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
251s   libxft2 libxrender1 libxss1 libxt6t64 littler r-base-core r-cran-brio
251s   r-cran-callr r-cran-cli r-cran-codetools r-cran-crayon r-cran-deldir
251s   r-cran-desc r-cran-diffobj r-cran-digest r-cran-evaluate r-cran-foreach
251s   r-cran-fs r-cran-gam r-cran-glue r-cran-interp r-cran-iterators
251s   r-cran-jsonlite r-cran-lattice r-cran-lifecycle r-cran-littler
251s   r-cran-magrittr r-cran-matrix r-cran-pkgbuild r-cran-pkgkitten
251s   r-cran-pkgload r-cran-praise r-cran-processx r-cran-ps r-cran-r6 r-cran-rcpp
251s   r-cran-rcppeigen r-cran-rlang r-cran-rprojroot r-cran-testthat r-cran-waldo
251s   r-cran-withr unzip x11-common xdg-utils zip
251s 0 upgraded, 81 newly installed, 0 to remove and 0 not upgraded.
251s Need to get 60.1 MB of archives.
251s After this operation, 130 MB of additional disk space will be used.
251s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
252s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
253s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB]
253s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB]
254s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB]
254s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB]
254s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
254s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
254s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
254s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
254s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
255s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
255s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB]
255s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB]
256s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB]
256s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
256s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB]
256s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
256s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
257s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
257s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
257s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB]
259s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
260s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
260s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
260s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.1-1 [238 kB]
260s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.1-1 [49.6 kB]
260s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.1-1 [27.6 kB]
260s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB]
260s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB]
260s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB]
260s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
260s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB]
261s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
261s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB]
262s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
262s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
262s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
262s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB]
263s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
263s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB]
263s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
264s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
264s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB]
298s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB]
298s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B]
298s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB]
299s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB]
299s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB]
299s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB]
299s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB]
300s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB]
301s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB]
302s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB]
302s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB]
302s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB]
302s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB]
304s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB]
304s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB]
304s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-iterators all 1.0.14-1 [336 kB]
304s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-foreach all 1.5.2-1 [124 kB]
305s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB]
305s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gam arm64 1.22-5-1 [393 kB]
305s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB]
306s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
306s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB]
308s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB]
309s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB]
314s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB]
316s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-interp arm64 1.1-6-1 [1433 kB]
317s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB]
318s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB]
319s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
320s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
320s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB]
320s Get:76 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB]
320s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
320s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB]
321s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB]
321s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-2 [150 kB]
321s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB]
323s Preconfiguring packages ...
323s Fetched 60.1 MB in 1min 11s (841 kB/s)
323s Selecting previously unselected package fonts-dejavu-mono.
323s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
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323s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ...
323s Unpacking fonts-dejavu-mono (2.37-8) ...
324s Selecting previously unselected package fonts-dejavu-core.
324s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ...
324s Unpacking fonts-dejavu-core (2.37-8) ...
324s Selecting previously unselected package fontconfig-config.
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324s Selecting previously unselected package libfontconfig1:arm64.
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324s Unpacking fontconfig (2.15.0-2ubuntu1) ...
324s Selecting previously unselected package libblas3:arm64.
324s Preparing to unpack .../05-libblas3_3.12.1-2_arm64.deb ...
324s Unpacking libblas3:arm64 (3.12.1-2) ...
324s Selecting previously unselected package libpixman-1-0:arm64.
324s Preparing to unpack .../06-libpixman-1-0_0.44.0-3_arm64.deb ...
324s Unpacking libpixman-1-0:arm64 (0.44.0-3) ...
324s Selecting previously unselected package libxcb-render0:arm64.
324s Preparing to unpack .../07-libxcb-render0_1.17.0-2_arm64.deb ...
324s Unpacking libxcb-render0:arm64 (1.17.0-2) ...
324s Selecting previously unselected package libxcb-shm0:arm64.
324s Preparing to unpack .../08-libxcb-shm0_1.17.0-2_arm64.deb ...
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325s Selecting previously unselected package libxrender1:arm64.
325s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ...
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325s Selecting previously unselected package libcairo2:arm64.
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325s Selecting previously unselected package libdeflate0:arm64.
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325s Selecting previously unselected package libgfortran5:arm64.
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325s Selecting previously unselected package libgomp1:arm64.
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325s Selecting previously unselected package libgraphite2-3:arm64.
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325s Selecting previously unselected package libice6:arm64.
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325s Selecting previously unselected package liblapack3:arm64.
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325s Selecting previously unselected package liblerc4:arm64.
326s Preparing to unpack .../22-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ...
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326s Selecting previously unselected package libthai-data.
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326s Selecting previously unselected package libthai0:arm64.
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326s Selecting previously unselected package libpango-1.0-0:arm64.
326s Preparing to unpack .../25-libpango-1.0-0_1.56.1-1_arm64.deb ...
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326s Selecting previously unselected package libpangoft2-1.0-0:arm64.
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326s Selecting previously unselected package libpangocairo-1.0-0:arm64.
326s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.1-1_arm64.deb ...
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326s Selecting previously unselected package libpaper2:arm64.
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326s Selecting previously unselected package libpaper-utils.
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326s Selecting previously unselected package libsharpyuv0:arm64.
326s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_arm64.deb ...
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326s Selecting previously unselected package libsm6:arm64.
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326s Selecting previously unselected package libtcl8.6:arm64.
326s Preparing to unpack .../32-libtcl8.6_8.6.16+dfsg-1_arm64.deb ...
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326s Selecting previously unselected package libjbig0:arm64.
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326s Selecting previously unselected package libwebp7:arm64.
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326s Selecting previously unselected package libtiff6:arm64.
326s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ...
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327s Selecting previously unselected package libxft2:arm64.
327s Preparing to unpack .../36-libxft2_2.3.6-1build1_arm64.deb ...
327s Unpacking libxft2:arm64 (2.3.6-1build1) ...
327s Selecting previously unselected package libxss1:arm64.
327s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build3_arm64.deb ...
327s Unpacking libxss1:arm64 (1:1.2.3-1build3) ...
327s Selecting previously unselected package libtk8.6:arm64.
327s Preparing to unpack .../38-libtk8.6_8.6.16-1_arm64.deb ...
327s Unpacking libtk8.6:arm64 (8.6.16-1) ...
327s Selecting previously unselected package libxt6t64:arm64.
327s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ...
327s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ...
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327s Unpacking zip (3.0-14ubuntu2) ...
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327s Preparing to unpack .../41-unzip_6.0-28ubuntu6_arm64.deb ...
327s Unpacking unzip (6.0-28ubuntu6) ...
327s Selecting previously unselected package xdg-utils.
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327s Unpacking xdg-utils (1.2.1-2ubuntu1) ...
327s Selecting previously unselected package r-base-core.
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327s Unpacking r-base-core (4.4.3-1) ...
328s Selecting previously unselected package r-cran-littler.
328s Preparing to unpack .../44-r-cran-littler_0.3.20-2_arm64.deb ...
328s Unpacking r-cran-littler (0.3.20-2) ...
328s Selecting previously unselected package littler.
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328s Selecting previously unselected package r-cran-brio.
328s Preparing to unpack .../46-r-cran-brio_1.1.5-1_arm64.deb ...
328s Unpacking r-cran-brio (1.1.5-1) ...
328s Selecting previously unselected package r-cran-ps.
328s Preparing to unpack .../47-r-cran-ps_1.9.0-1_arm64.deb ...
328s Unpacking r-cran-ps (1.9.0-1) ...
328s Selecting previously unselected package r-cran-r6.
328s Preparing to unpack .../48-r-cran-r6_2.6.1-1_all.deb ...
328s Unpacking r-cran-r6 (2.6.1-1) ...
328s Selecting previously unselected package r-cran-processx.
328s Preparing to unpack .../49-r-cran-processx_3.8.6-1_arm64.deb ...
328s Unpacking r-cran-processx (3.8.6-1) ...
328s Selecting previously unselected package r-cran-callr.
328s Preparing to unpack .../50-r-cran-callr_3.7.6-1_all.deb ...
328s Unpacking r-cran-callr (3.7.6-1) ...
328s Selecting previously unselected package r-cran-cli.
328s Preparing to unpack .../51-r-cran-cli_3.6.4-1_arm64.deb ...
328s Unpacking r-cran-cli (3.6.4-1) ...
328s Selecting previously unselected package r-cran-codetools.
328s Preparing to unpack .../52-r-cran-codetools_0.2-20-1_all.deb ...
328s Unpacking r-cran-codetools (0.2-20-1) ...
328s Selecting previously unselected package r-cran-crayon.
328s Preparing to unpack .../53-r-cran-crayon_1.5.3-1_all.deb ...
328s Unpacking r-cran-crayon (1.5.3-1) ...
328s Selecting previously unselected package r-cran-deldir.
328s Preparing to unpack .../54-r-cran-deldir_2.0-4-1build1_arm64.deb ...
328s Unpacking r-cran-deldir (2.0-4-1build1) ...
329s Selecting previously unselected package r-cran-desc.
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329s Unpacking r-cran-desc (1.4.3-1) ...
329s Selecting previously unselected package r-cran-diffobj.
329s Preparing to unpack .../56-r-cran-diffobj_0.3.5-1_arm64.deb ...
329s Unpacking r-cran-diffobj (0.3.5-1) ...
329s Selecting previously unselected package r-cran-digest.
329s Preparing to unpack .../57-r-cran-digest_0.6.37-1_arm64.deb ...
329s Unpacking r-cran-digest (0.6.37-1) ...
329s Selecting previously unselected package r-cran-evaluate.
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329s Unpacking r-cran-evaluate (1.0.3-1) ...
329s Selecting previously unselected package r-cran-iterators.
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329s Unpacking r-cran-iterators (1.0.14-1) ...
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329s Selecting previously unselected package r-cran-fs.
329s Preparing to unpack .../61-r-cran-fs_1.6.5+dfsg-1_arm64.deb ...
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329s Selecting previously unselected package r-cran-gam.
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329s Selecting previously unselected package r-cran-glue.
329s Preparing to unpack .../63-r-cran-glue_1.8.0-1_arm64.deb ...
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329s Selecting previously unselected package r-cran-pkgkitten.
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329s Selecting previously unselected package r-cran-rcpp.
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330s Selecting previously unselected package r-cran-lattice.
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330s Unpacking r-cran-lattice (0.22-6-1) ...
330s Selecting previously unselected package r-cran-matrix.
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330s Selecting previously unselected package r-cran-rcppeigen.
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330s Selecting previously unselected package r-cran-interp.
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330s Selecting previously unselected package r-cran-rlang.
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330s Selecting previously unselected package r-cran-magrittr.
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330s Selecting previously unselected package r-cran-pkgbuild.
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331s Selecting previously unselected package r-cran-withr.
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331s Selecting previously unselected package r-cran-waldo.
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331s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
331s Setting up libpixman-1-0:arm64 (0.44.0-3) ...
331s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ...
331s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
331s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ...
331s Setting up libdatrie1:arm64 (0.2.13-3build1) ...
331s Setting up libxcb-render0:arm64 (1.17.0-2) ...
331s Setting up unzip (6.0-28ubuntu6) ...
331s Setting up x11-common (1:7.7+23ubuntu3) ...
332s Setting up libdeflate0:arm64 (1.23-1) ...
332s Setting up libxcb-shm0:arm64 (1.17.0-2) ...
332s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ...
332s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ...
332s Setting up zip (3.0-14ubuntu2) ...
332s Setting up libblas3:arm64 (3.12.1-2) ...
332s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
332s Setting up fonts-dejavu-mono (2.37-8) ...
332s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ...
332s Setting up fonts-dejavu-core (2.37-8) ...
332s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
332s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ...
332s Setting up libwebp7:arm64 (1.5.0-0.1) ...
332s Setting up libharfbuzz0b:arm64 (10.2.0-1) ...
332s Setting up libthai-data (0.1.29-2build1) ...
332s Setting up libxss1:arm64 (1:1.2.3-1build3) ...
332s Setting up libpaper2:arm64 (2.2.5-0.3) ...
332s Setting up xdg-utils (1.2.1-2ubuntu1) ...
332s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
332s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
332s Setting up libice6:arm64 (2:1.1.1-1) ...
332s Setting up liblapack3:arm64 (3.12.1-2) ...
332s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
332s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
332s Setting up libpaper-utils (2.2.5-0.3) ...
332s Setting up libthai0:arm64 (0.1.29-2build1) ...
332s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
332s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ...
332s Setting up libsm6:arm64 (2:1.2.4-1) ...
332s Setting up fontconfig (2.15.0-2ubuntu1) ...
334s Regenerating fonts cache... done.
334s Setting up libxft2:arm64 (2.3.6-1build1) ...
334s Setting up libtk8.6:arm64 (8.6.16-1) ...
334s Setting up libpango-1.0-0:arm64 (1.56.1-1) ...
334s Setting up libcairo2:arm64 (1.18.2-2) ...
335s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ...
335s Setting up libpangoft2-1.0-0:arm64 (1.56.1-1) ...
335s Setting up libpangocairo-1.0-0:arm64 (1.56.1-1) ...
335s Setting up r-base-core (4.4.3-1) ...
335s Creating config file /etc/R/Renviron with new version
335s Setting up r-cran-crayon (1.5.3-1) ...
335s Setting up r-cran-lattice (0.22-6-1) ...
335s Setting up r-cran-ps (1.9.0-1) ...
335s Setting up r-cran-r6 (2.6.1-1) ...
335s Setting up r-cran-pkgkitten (0.2.4-1) ...
335s Setting up r-cran-magrittr (2.0.3-1) ...
335s Setting up r-cran-littler (0.3.20-2) ...
335s Setting up r-cran-fs (1.6.5+dfsg-1) ...
335s Setting up r-cran-rcpp (1.0.14-1) ...
335s Setting up r-cran-codetools (0.2-20-1) ...
335s Setting up r-cran-brio (1.1.5-1) ...
335s Setting up r-cran-diffobj (0.3.5-1) ...
335s Setting up r-cran-rlang (1.1.5-1) ...
335s Setting up littler (0.3.20-2) ...
335s Setting up r-cran-withr (3.0.2+dfsg-1) ...
335s Setting up r-cran-processx (3.8.6-1) ...
335s Setting up r-cran-praise (1.0.0-4build1) ...
335s Setting up r-cran-iterators (1.0.14-1) ...
335s Setting up r-cran-digest (0.6.37-1) ...
335s Setting up r-cran-evaluate (1.0.3-1) ...
335s Setting up r-cran-foreach (1.5.2-1) ...
335s Setting up r-cran-glue (1.8.0-1) ...
335s Setting up r-cran-gam (1.22-5-1) ...
335s Setting up r-cran-cli (3.6.4-1) ...
335s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
335s Setting up r-cran-rprojroot (2.0.4-2) ...
335s Setting up r-cran-deldir (2.0-4-1build1) ...
335s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
335s Setting up r-cran-waldo (0.6.1-2) ...
335s Setting up r-cran-matrix (1.7-3-1) ...
335s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
335s Setting up r-cran-callr (3.7.6-1) ...
335s Setting up r-cran-desc (1.4.3-1) ...
335s Setting up r-cran-interp (1.1-6-1) ...
335s Setting up r-cran-pkgbuild (1.4.6-1) ...
335s Setting up r-cran-pkgload (1.4.0-1) ...
335s Setting up r-cran-testthat (3.2.3-1) ...
335s Processing triggers for libc-bin (2.41-1ubuntu2) ...
335s Processing triggers for man-db (2.13.0-1) ...
336s Processing triggers for install-info (7.1.1-1) ...
337s autopkgtest [10:10:56]: test run-unit-test: [-----------------------
337s BEGIN TEST testthat.R
337s 
337s R version 4.4.3 (2025-02-28) -- "Trophy Case"
337s Copyright (C) 2025 The R Foundation for Statistical Computing
337s Platform: aarch64-unknown-linux-gnu
337s 
337s R is free software and comes with ABSOLUTELY NO WARRANTY.
337s You are welcome to redistribute it under certain conditions.
337s Type 'license()' or 'licence()' for distribution details.
337s 
337s R is a collaborative project with many contributors.
337s Type 'contributors()' for more information and
337s 'citation()' on how to cite R or R packages in publications.
337s 
337s Type 'demo()' for some demos, 'help()' for on-line help, or
337s 'help.start()' for an HTML browser interface to help.
337s Type 'q()' to quit R.
337s 
338s > library(testthat)
338s > library(gam)
338s Loading required package: splines
338s Loading required package: foreach
338s Loaded gam 1.22-5
338s 
338s > 
338s > test_check("gam")
338s Start:  y ~ s(x, 6) + z; AIC= 43.7495 
338s Step:1 y ~ s(x, 6) ; AIC= 42.6681 
338s Testing fit1
338s Testing fit2
338s Testing fit3
338s Testing fit4
338s Testing fit5
338s Testing fit6
338s Testing sum1
338s Testing an1
338s Testing an2
338s Testing step1
338s [ FAIL 0 | WARN 1 | SKIP 0 | PASS 10 ]
338s 
338s [ FAIL 0 | WARN 1 | SKIP 0 | PASS 10 ]
338s > 
339s autopkgtest [10:10:58]: test run-unit-test: -----------------------]
339s autopkgtest [10:10:58]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
339s run-unit-test        PASS
340s autopkgtest [10:10:59]: test pkg-r-autopkgtest: preparing testbed
340s Reading package lists...
340s Building dependency tree...
340s Reading state information...
341s Starting pkgProblemResolver with broken count: 0
341s Starting 2 pkgProblemResolver with broken count: 0
341s Done
342s The following NEW packages will be installed:
342s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
342s   dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
342s   gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14
342s   gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools
342s   libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
342s   libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev
342s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3
342s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
342s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
342s   libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev
342s   zlib1g-dev
343s 0 upgraded, 54 newly installed, 0 to remove and 0 not upgraded.
343s Need to get 92.7 MB of archives.
343s After this operation, 334 MB of additional disk space will be used.
343s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
344s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
344s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB]
356s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B]
356s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B]
356s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB]
356s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB]
356s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB]
356s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB]
360s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB]
362s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB]
365s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB]
366s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB]
368s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB]
371s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB]
395s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB]
396s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B]
396s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B]
396s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB]
398s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB]
411s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB]
411s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B]
411s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B]
411s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
411s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB]
411s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB]
412s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB]
425s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB]
425s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B]
425s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B]
425s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB]
425s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB]
425s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB]
426s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB]
426s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB]
439s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB]
440s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
440s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
440s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB]
444s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB]
445s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB]
445s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB]
445s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B]
445s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB]
446s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB]
446s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
447s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB]
447s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB]
447s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB]
448s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB]
448s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB]
448s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB]
448s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B]
448s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
448s Fetched 92.7 MB in 1min 45s (879 kB/s)
449s Selecting previously unselected package libisl23:arm64.
449s (Reading database ... 
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(Reading database ... 124706 files and directories currently installed.)
449s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ...
449s Unpacking libisl23:arm64 (0.27-1) ...
449s Selecting previously unselected package libmpc3:arm64.
449s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ...
449s Unpacking libmpc3:arm64 (1.3.1-1build2) ...
449s Selecting previously unselected package cpp-14-aarch64-linux-gnu.
449s Preparing to unpack .../02-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
449s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
449s Selecting previously unselected package cpp-14.
449s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_arm64.deb ...
449s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
449s Selecting previously unselected package cpp-aarch64-linux-gnu.
449s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
449s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
449s Selecting previously unselected package cpp.
449s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ...
449s Unpacking cpp (4:14.2.0-1ubuntu1) ...
449s Selecting previously unselected package libcc1-0:arm64.
449s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_arm64.deb ...
449s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ...
449s Selecting previously unselected package libitm1:arm64.
449s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_arm64.deb ...
449s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ...
449s Selecting previously unselected package libasan8:arm64.
449s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_arm64.deb ...
449s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ...
450s Selecting previously unselected package liblsan0:arm64.
450s Preparing to unpack .../09-liblsan0_15-20250222-0ubuntu1_arm64.deb ...
450s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ...
450s Selecting previously unselected package libtsan2:arm64.
450s Preparing to unpack .../10-libtsan2_15-20250222-0ubuntu1_arm64.deb ...
450s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ...
450s Selecting previously unselected package libubsan1:arm64.
450s Preparing to unpack .../11-libubsan1_15-20250222-0ubuntu1_arm64.deb ...
450s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ...
450s Selecting previously unselected package libhwasan0:arm64.
450s Preparing to unpack .../12-libhwasan0_15-20250222-0ubuntu1_arm64.deb ...
450s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ...
450s Selecting previously unselected package libgcc-14-dev:arm64.
450s Preparing to unpack .../13-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ...
450s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ...
450s Selecting previously unselected package gcc-14-aarch64-linux-gnu.
450s Preparing to unpack .../14-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
450s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
451s Selecting previously unselected package gcc-14.
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451s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
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451s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
451s Selecting previously unselected package gcc.
451s Preparing to unpack .../17-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ...
451s Unpacking gcc (4:14.2.0-1ubuntu1) ...
451s Selecting previously unselected package libstdc++-14-dev:arm64.
451s Preparing to unpack .../18-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ...
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451s Selecting previously unselected package g++-14-aarch64-linux-gnu.
451s Preparing to unpack .../19-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
451s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
452s Selecting previously unselected package g++-14.
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452s Unpacking g++-14 (14.2.0-17ubuntu3) ...
452s Selecting previously unselected package g++-aarch64-linux-gnu.
452s Preparing to unpack .../21-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
452s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
452s Selecting previously unselected package g++.
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452s Unpacking g++ (4:14.2.0-1ubuntu1) ...
452s Selecting previously unselected package build-essential.
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452s Unpacking build-essential (12.10ubuntu1) ...
452s Selecting previously unselected package dctrl-tools.
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452s Unpacking dctrl-tools (2.24-3build3) ...
452s Selecting previously unselected package libgfortran-14-dev:arm64.
452s Preparing to unpack .../25-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ...
452s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ...
452s Selecting previously unselected package gfortran-14-aarch64-linux-gnu.
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452s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
452s Selecting previously unselected package gfortran-14.
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452s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
452s Selecting previously unselected package gfortran-aarch64-linux-gnu.
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453s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
453s Selecting previously unselected package gfortran.
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453s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
453s Selecting previously unselected package icu-devtools.
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453s Selecting previously unselected package libblas-dev:arm64.
453s Preparing to unpack .../31-libblas-dev_3.12.1-2_arm64.deb ...
453s Unpacking libblas-dev:arm64 (3.12.1-2) ...
453s Selecting previously unselected package libbz2-dev:arm64.
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453s Selecting previously unselected package libdeflate-dev:arm64.
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453s Selecting previously unselected package libicu-dev:arm64.
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453s Selecting previously unselected package libjpeg-turbo8-dev:arm64.
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454s Selecting previously unselected package libjpeg-dev:arm64.
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454s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ...
454s Selecting previously unselected package liblapack-dev:arm64.
454s Preparing to unpack .../38-liblapack-dev_3.12.1-2_arm64.deb ...
454s Unpacking liblapack-dev:arm64 (3.12.1-2) ...
454s Selecting previously unselected package libncurses-dev:arm64.
454s Preparing to unpack .../39-libncurses-dev_6.5+20250216-2_arm64.deb ...
454s Unpacking libncurses-dev:arm64 (6.5+20250216-2) ...
454s Selecting previously unselected package libpcre2-16-0:arm64.
454s Preparing to unpack .../40-libpcre2-16-0_10.45-1_arm64.deb ...
454s Unpacking libpcre2-16-0:arm64 (10.45-1) ...
454s Selecting previously unselected package libpcre2-32-0:arm64.
454s Preparing to unpack .../41-libpcre2-32-0_10.45-1_arm64.deb ...
454s Unpacking libpcre2-32-0:arm64 (10.45-1) ...
454s Selecting previously unselected package libpcre2-posix3:arm64.
454s Preparing to unpack .../42-libpcre2-posix3_10.45-1_arm64.deb ...
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454s Selecting previously unselected package libpcre2-dev:arm64.
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454s Unpacking libpcre2-dev:arm64 (10.45-1) ...
454s Selecting previously unselected package libpkgconf3:arm64.
454s Preparing to unpack .../44-libpkgconf3_1.8.1-4_arm64.deb ...
454s Unpacking libpkgconf3:arm64 (1.8.1-4) ...
454s Selecting previously unselected package zlib1g-dev:arm64.
454s Preparing to unpack .../45-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ...
454s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
454s Selecting previously unselected package libpng-dev:arm64.
455s Preparing to unpack .../46-libpng-dev_1.6.47-1_arm64.deb ...
455s Unpacking libpng-dev:arm64 (1.6.47-1) ...
455s Selecting previously unselected package libreadline-dev:arm64.
455s Preparing to unpack .../47-libreadline-dev_8.2-6_arm64.deb ...
455s Unpacking libreadline-dev:arm64 (8.2-6) ...
455s Selecting previously unselected package liblzma-dev:arm64.
455s Preparing to unpack .../48-liblzma-dev_5.6.4-1_arm64.deb ...
455s Unpacking liblzma-dev:arm64 (5.6.4-1) ...
455s Selecting previously unselected package pkgconf-bin.
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455s Selecting previously unselected package pkgconf:arm64.
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455s Selecting previously unselected package libtirpc-dev:arm64.
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455s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ...
455s Selecting previously unselected package r-base-dev.
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455s Selecting previously unselected package pkg-r-autopkgtest.
455s Preparing to unpack .../53-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
455s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
455s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ...
455s Setting up libncurses-dev:arm64 (6.5+20250216-2) ...
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455s Setting up gfortran (4:14.2.0-1ubuntu1) ...
455s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
455s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
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455s Setting up r-base-dev (4.4.3-1) ...
455s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
455s Processing triggers for libc-bin (2.41-1ubuntu2) ...
455s Processing triggers for man-db (2.13.0-1) ...
456s Processing triggers for install-info (7.1.1-1) ...
458s autopkgtest [10:12:57]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
458s autopkgtest [10:12:57]: test pkg-r-autopkgtest: [-----------------------
458s Test: Try to load the R library gam
458s 
458s R version 4.4.3 (2025-02-28) -- "Trophy Case"
458s Copyright (C) 2025 The R Foundation for Statistical Computing
458s Platform: aarch64-unknown-linux-gnu
458s 
458s R is free software and comes with ABSOLUTELY NO WARRANTY.
458s You are welcome to redistribute it under certain conditions.
458s Type 'license()' or 'licence()' for distribution details.
458s 
458s R is a collaborative project with many contributors.
458s Type 'contributors()' for more information and
458s 'citation()' on how to cite R or R packages in publications.
458s 
458s Type 'demo()' for some demos, 'help()' for on-line help, or
458s 'help.start()' for an HTML browser interface to help.
458s Type 'q()' to quit R.
458s 
458s > library('gam')
458s Loading required package: splines
458s Loading required package: foreach
458s Loaded gam 1.22-5
458s 
458s > 
458s > 
458s Other tests are currently unsupported!
458s They will be progressively added.
459s autopkgtest [10:12:58]: test pkg-r-autopkgtest: -----------------------]
459s autopkgtest [10:12:58]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
459s pkg-r-autopkgtest    PASS
460s autopkgtest [10:12:59]: @@@@@@@@@@@@@@@@@@@@ summary
460s run-unit-test        PASS
460s pkg-r-autopkgtest    PASS
477s nova [W] Using flock in prodstack6-arm64
477s flock: timeout while waiting to get lock
477s Creating nova instance adt-plucky-arm64-r-cran-gam-20250315-100518-juju-7f2275-prod-proposed-migration-environment-2-c8ee8996-2cb6-40f0-959f-e6f0023270d0 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)...
477s nova [W] Timed out waiting for 62012120-f815-4db4-9780-34ca966f77a9 to get deleted.