  1s autopkgtest [15:23:44]: starting date and time: 2025-03-15 15:23:44+0000
  1s autopkgtest [15:23:44]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  1s autopkgtest [15:23:44]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.yew67b3d/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-diffobj --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-34.secgroup --name adt-plucky-arm64-r-cran-diffobj-20250315-152342-juju-7f2275-prod-proposed-migration-environment-15-69a4a03a-e904-4c70-ae15-c91e93b20d4d --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
154s autopkgtest [15:26:17]: testbed dpkg architecture: arm64
155s autopkgtest [15:26:18]: testbed apt version: 2.9.33
155s autopkgtest [15:26:18]: @@@@@@@@@@@@@@@@@@@@ test bed setup
155s autopkgtest [15:26:18]: testbed release detected to be: None
156s autopkgtest [15:26:19]: updating testbed package index (apt update)
156s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
157s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
158s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
158s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
158s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB]
158s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB]
158s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
158s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [78.2 kB]
158s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1976 B]
158s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B]
158s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [346 kB]
158s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [15.8 kB]
158s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B]
158s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [572 B]
158s Fetched 1094 kB in 2s (562 kB/s)
159s Reading package lists...
160s + lsb_release --codename --short
160s + RELEASE=plucky
160s + cat
160s + [ plucky != trusty ]
160s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade
160s Reading package lists...
160s Building dependency tree...
160s Reading state information...
161s Calculating upgrade...
161s Calculating upgrade...
161s The following packages will be upgraded:
161s   python3-jinja2 strace
161s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
161s Need to get 608 kB of archives.
161s After this operation, 11.3 kB of additional disk space will be used.
161s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB]
162s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
163s Fetched 608 kB in 1s (606 kB/s)
163s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 117701 files and directories currently installed.)
163s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ...
163s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
163s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
163s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
163s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
163s Setting up strace (6.13+ds-1ubuntu1) ...
163s Processing triggers for man-db (2.13.0-1) ...
164s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref
164s + /usr/lib/apt/apt-helper analyze-pattern ?true
164s + uname -r
164s + sed s/\./\\./g
164s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.*
164s + apt list ?obsolete
164s + tail -n+2
164s + grep -v ^linux-.*6\.14\.0-10-generic.*
164s + cut -d/ -f1
164s + obsolete_pkgs=linux-headers-6.11.0-8-generic
164s linux-headers-6.11.0-8
164s linux-image-6.11.0-8-generic
164s linux-modules-6.11.0-8-generic
164s linux-tools-6.11.0-8-generic
164s linux-tools-6.11.0-8
164s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8
164s Reading package lists...
165s Building dependency tree...
165s Reading state information...
165s Solving dependencies...
165s The following packages will be REMOVED:
165s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
165s   libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
165s   linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic*
165s   linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic*
166s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded.
166s After this operation, 267 MB disk space will be freed.
166s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 117701 files and directories currently installed.)
166s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
166s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
166s Removing libpython3.12t64:arm64 (3.12.9-1) ...
166s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ...
166s Removing libnsl2:arm64 (1.3.0-3build3) ...
166s Removing libpython3.12-minimal:arm64 (3.12.9-1) ...
166s Removing libunwind8:arm64 (1.6.2-3.1) ...
166s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
166s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
168s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ...
168s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic
168s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic
168s /etc/kernel/postrm.d/initramfs-tools:
168s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic
168s /etc/kernel/postrm.d/zz-flash-kernel:
168s flash-kernel: Kernel 6.11.0-8-generic has been removed.
168s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required.
169s /etc/kernel/postrm.d/zz-update-grub:
169s Sourcing file `/etc/default/grub'
169s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
169s Generating grub configuration file ...
169s Found linux image: /boot/vmlinuz-6.14.0-10-generic
169s Found initrd image: /boot/initrd.img-6.14.0-10-generic
169s Warning: os-prober will not be executed to detect other bootable partitions.
169s Systems on them will not be added to the GRUB boot configuration.
169s Check GRUB_DISABLE_OS_PROBER documentation entry.
169s Adding boot menu entry for UEFI Firmware Settings ...
169s done
169s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
169s Processing triggers for libc-bin (2.41-1ubuntu1) ...
170s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 81650 files and directories currently installed.)
170s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ...
170s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ...
170s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
170s + grep -q trusty /etc/lsb-release
170s + [ ! -d /usr/share/doc/unattended-upgrades ]
170s + [ ! -d /usr/share/doc/lxd ]
170s + [ ! -d /usr/share/doc/lxd-client ]
170s + [ ! -d /usr/share/doc/snapd ]
170s + type iptables
170s + cat
170s + chmod 755 /etc/rc.local
170s + . /etc/rc.local
170s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu
170s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP
170s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP
170s + uname -m
170s + [ aarch64 = ppc64le ]
170s + [ -d /run/systemd/system ]
170s + systemd-detect-virt --quiet --vm
170s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/
170s + cat
170s + grep -q lz4 /etc/initramfs-tools/initramfs.conf
170s + echo COMPRESS=lz4
170s autopkgtest [15:26:33]: upgrading testbed (apt dist-upgrade and autopurge)
170s Reading package lists...
170s Building dependency tree...
170s Reading state information...
171s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
171s Starting 2 pkgProblemResolver with broken count: 0
171s Done
172s Entering ResolveByKeep
172s 
172s Calculating upgrade...
172s The following packages will be upgraded:
172s   libc-bin libc-dev-bin libc6 libc6-dev locales
173s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
173s Need to get 9530 kB of archives.
173s After this operation, 0 B of additional disk space will be used.
173s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB]
174s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB]
174s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB]
177s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB]
177s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB]
181s Preconfiguring packages ...
182s Fetched 9530 kB in 9s (1094 kB/s)
182s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 81647 files and directories currently installed.)
182s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ...
182s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
182s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ...
182s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
182s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ...
182s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
182s Setting up libc6:arm64 (2.41-1ubuntu2) ...
182s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 81647 files and directories currently installed.)
182s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ...
182s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
183s Setting up libc-bin (2.41-1ubuntu2) ...
183s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 81647 files and directories currently installed.)
183s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
183s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
183s Setting up locales (2.41-1ubuntu2) ...
183s Generating locales (this might take a while)...
185s   en_US.UTF-8... done
185s Generation complete.
185s Setting up libc-dev-bin (2.41-1ubuntu2) ...
185s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ...
185s Processing triggers for man-db (2.13.0-1) ...
186s Processing triggers for systemd (257.3-1ubuntu3) ...
187s Reading package lists...
188s Building dependency tree...
188s Reading state information...
188s Starting pkgProblemResolver with broken count: 0
188s Starting 2 pkgProblemResolver with broken count: 0
188s Done
188s Solving dependencies...
189s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
189s autopkgtest [15:26:52]: rebooting testbed after setup commands that affected boot
213s autopkgtest [15:27:16]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025
215s autopkgtest [15:27:18]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-diffobj
217s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-diffobj 0.3.5-1 (dsc) [2117 B]
217s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-diffobj 0.3.5-1 (tar) [479 kB]
217s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-diffobj 0.3.5-1 (diff) [3480 B]
218s gpgv: Signature made Tue Oct 12 17:58:35 2021 UTC
218s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
218s gpgv:                issuer "tille@debian.org"
218s gpgv: Can't check signature: No public key
218s dpkg-source: warning: cannot verify inline signature for ./r-cran-diffobj_0.3.5-1.dsc: no acceptable signature found
218s autopkgtest [15:27:21]: testing package r-cran-diffobj version 0.3.5-1
218s autopkgtest [15:27:21]: build not needed
221s autopkgtest [15:27:24]: test run-unit-test: preparing testbed
221s Reading package lists...
221s Building dependency tree...
221s Reading state information...
221s Starting pkgProblemResolver with broken count: 0
222s Starting 2 pkgProblemResolver with broken count: 0
222s Done
222s The following NEW packages will be installed:
222s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
222s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1
222s   libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8
222s   liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
222s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
222s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
222s   libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-brio r-cran-callr
222s   r-cran-cli r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest
222s   r-cran-evaluate r-cran-fs r-cran-glue r-cran-jsonlite r-cran-lifecycle
222s   r-cran-magrittr r-cran-pkgbuild r-cran-pkgload r-cran-praise r-cran-processx
222s   r-cran-ps r-cran-r6 r-cran-rlang r-cran-rprojroot r-cran-testthat
222s   r-cran-waldo r-cran-withr unzip x11-common xdg-utils zip
222s 0 upgraded, 68 newly installed, 0 to remove and 0 not upgraded.
222s Need to get 48.5 MB of archives.
222s After this operation, 96.9 MB of additional disk space will be used.
222s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
223s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
223s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB]
224s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB]
224s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB]
224s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB]
224s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
224s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
224s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
224s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
224s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
224s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
224s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB]
224s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB]
225s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB]
225s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
225s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB]
225s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
225s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
225s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
225s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
225s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB]
227s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
227s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
227s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
227s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB]
227s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB]
227s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB]
227s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB]
227s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB]
227s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB]
227s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
227s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB]
228s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
228s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB]
228s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
228s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
228s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
228s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB]
229s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
229s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB]
229s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
229s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
230s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB]
250s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB]
250s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB]
251s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB]
251s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB]
251s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB]
252s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB]
253s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB]
253s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB]
254s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB]
254s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB]
255s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB]
255s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB]
255s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB]
255s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB]
256s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB]
257s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
257s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
258s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB]
258s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB]
258s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
258s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB]
259s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB]
259s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-2 [150 kB]
259s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB]
261s Preconfiguring packages ...
261s Fetched 48.5 MB in 39s (1258 kB/s)
261s Selecting previously unselected package fonts-dejavu-mono.
261s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 81647 files and directories currently installed.)
261s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ...
261s Unpacking fonts-dejavu-mono (2.37-8) ...
261s Selecting previously unselected package fonts-dejavu-core.
261s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ...
261s Unpacking fonts-dejavu-core (2.37-8) ...
261s Selecting previously unselected package fontconfig-config.
261s Preparing to unpack .../02-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ...
262s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
262s Selecting previously unselected package libfontconfig1:arm64.
262s Preparing to unpack .../03-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ...
262s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ...
262s Selecting previously unselected package fontconfig.
262s Preparing to unpack .../04-fontconfig_2.15.0-2ubuntu1_arm64.deb ...
262s Unpacking fontconfig (2.15.0-2ubuntu1) ...
262s Selecting previously unselected package libblas3:arm64.
262s Preparing to unpack .../05-libblas3_3.12.1-2_arm64.deb ...
262s Unpacking libblas3:arm64 (3.12.1-2) ...
262s Selecting previously unselected package libpixman-1-0:arm64.
262s Preparing to unpack .../06-libpixman-1-0_0.44.0-3_arm64.deb ...
262s Unpacking libpixman-1-0:arm64 (0.44.0-3) ...
262s Selecting previously unselected package libxcb-render0:arm64.
262s Preparing to unpack .../07-libxcb-render0_1.17.0-2_arm64.deb ...
262s Unpacking libxcb-render0:arm64 (1.17.0-2) ...
262s Selecting previously unselected package libxcb-shm0:arm64.
262s Preparing to unpack .../08-libxcb-shm0_1.17.0-2_arm64.deb ...
262s Unpacking libxcb-shm0:arm64 (1.17.0-2) ...
262s Selecting previously unselected package libxrender1:arm64.
262s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ...
262s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ...
262s Selecting previously unselected package libcairo2:arm64.
262s Preparing to unpack .../10-libcairo2_1.18.2-2_arm64.deb ...
262s Unpacking libcairo2:arm64 (1.18.2-2) ...
262s Selecting previously unselected package libdatrie1:arm64.
262s Preparing to unpack .../11-libdatrie1_0.2.13-3build1_arm64.deb ...
262s Unpacking libdatrie1:arm64 (0.2.13-3build1) ...
262s Selecting previously unselected package libdeflate0:arm64.
262s Preparing to unpack .../12-libdeflate0_1.23-1_arm64.deb ...
262s Unpacking libdeflate0:arm64 (1.23-1) ...
262s Selecting previously unselected package libgfortran5:arm64.
262s Preparing to unpack .../13-libgfortran5_15-20250222-0ubuntu1_arm64.deb ...
262s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ...
262s Selecting previously unselected package libgomp1:arm64.
262s Preparing to unpack .../14-libgomp1_15-20250222-0ubuntu1_arm64.deb ...
262s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ...
262s Selecting previously unselected package libgraphite2-3:arm64.
262s Preparing to unpack .../15-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ...
262s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
262s Selecting previously unselected package libharfbuzz0b:arm64.
262s Preparing to unpack .../16-libharfbuzz0b_10.2.0-1_arm64.deb ...
262s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ...
262s Selecting previously unselected package x11-common.
262s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu3_all.deb ...
262s Unpacking x11-common (1:7.7+23ubuntu3) ...
262s Selecting previously unselected package libice6:arm64.
262s Preparing to unpack .../18-libice6_2%3a1.1.1-1_arm64.deb ...
262s Unpacking libice6:arm64 (2:1.1.1-1) ...
262s Selecting previously unselected package libjpeg-turbo8:arm64.
262s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ...
262s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
262s Selecting previously unselected package libjpeg8:arm64.
262s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_arm64.deb ...
262s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
262s Selecting previously unselected package liblapack3:arm64.
262s Preparing to unpack .../21-liblapack3_3.12.1-2_arm64.deb ...
262s Unpacking liblapack3:arm64 (3.12.1-2) ...
262s Selecting previously unselected package liblerc4:arm64.
262s Preparing to unpack .../22-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ...
262s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
262s Selecting previously unselected package libthai-data.
262s Preparing to unpack .../23-libthai-data_0.1.29-2build1_all.deb ...
262s Unpacking libthai-data (0.1.29-2build1) ...
262s Selecting previously unselected package libthai0:arm64.
262s Preparing to unpack .../24-libthai0_0.1.29-2build1_arm64.deb ...
262s Unpacking libthai0:arm64 (0.1.29-2build1) ...
262s Selecting previously unselected package libpango-1.0-0:arm64.
262s Preparing to unpack .../25-libpango-1.0-0_1.56.2-1_arm64.deb ...
262s Unpacking libpango-1.0-0:arm64 (1.56.2-1) ...
263s Selecting previously unselected package libpangoft2-1.0-0:arm64.
263s Preparing to unpack .../26-libpangoft2-1.0-0_1.56.2-1_arm64.deb ...
263s Unpacking libpangoft2-1.0-0:arm64 (1.56.2-1) ...
263s Selecting previously unselected package libpangocairo-1.0-0:arm64.
263s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.2-1_arm64.deb ...
263s Unpacking libpangocairo-1.0-0:arm64 (1.56.2-1) ...
263s Selecting previously unselected package libpaper2:arm64.
263s Preparing to unpack .../28-libpaper2_2.2.5-0.3_arm64.deb ...
263s Unpacking libpaper2:arm64 (2.2.5-0.3) ...
263s Selecting previously unselected package libpaper-utils.
263s Preparing to unpack .../29-libpaper-utils_2.2.5-0.3_arm64.deb ...
263s Unpacking libpaper-utils (2.2.5-0.3) ...
263s Selecting previously unselected package libsharpyuv0:arm64.
263s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_arm64.deb ...
263s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ...
263s Selecting previously unselected package libsm6:arm64.
263s Preparing to unpack .../31-libsm6_2%3a1.2.4-1_arm64.deb ...
263s Unpacking libsm6:arm64 (2:1.2.4-1) ...
263s Selecting previously unselected package libtcl8.6:arm64.
263s Preparing to unpack .../32-libtcl8.6_8.6.16+dfsg-1_arm64.deb ...
263s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ...
263s Selecting previously unselected package libjbig0:arm64.
263s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu2_arm64.deb ...
263s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ...
263s Selecting previously unselected package libwebp7:arm64.
263s Preparing to unpack .../34-libwebp7_1.5.0-0.1_arm64.deb ...
263s Unpacking libwebp7:arm64 (1.5.0-0.1) ...
263s Selecting previously unselected package libtiff6:arm64.
263s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ...
263s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
263s Selecting previously unselected package libxft2:arm64.
263s Preparing to unpack .../36-libxft2_2.3.6-1build1_arm64.deb ...
263s Unpacking libxft2:arm64 (2.3.6-1build1) ...
263s Selecting previously unselected package libxss1:arm64.
263s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build3_arm64.deb ...
263s Unpacking libxss1:arm64 (1:1.2.3-1build3) ...
263s Selecting previously unselected package libtk8.6:arm64.
263s Preparing to unpack .../38-libtk8.6_8.6.16-1_arm64.deb ...
263s Unpacking libtk8.6:arm64 (8.6.16-1) ...
263s Selecting previously unselected package libxt6t64:arm64.
263s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ...
263s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ...
263s Selecting previously unselected package zip.
263s Preparing to unpack .../40-zip_3.0-14ubuntu2_arm64.deb ...
263s Unpacking zip (3.0-14ubuntu2) ...
263s Selecting previously unselected package unzip.
263s Preparing to unpack .../41-unzip_6.0-28ubuntu6_arm64.deb ...
263s Unpacking unzip (6.0-28ubuntu6) ...
263s Selecting previously unselected package xdg-utils.
263s Preparing to unpack .../42-xdg-utils_1.2.1-2ubuntu1_all.deb ...
263s Unpacking xdg-utils (1.2.1-2ubuntu1) ...
263s Selecting previously unselected package r-base-core.
263s Preparing to unpack .../43-r-base-core_4.4.3-1_arm64.deb ...
263s Unpacking r-base-core (4.4.3-1) ...
263s Selecting previously unselected package r-cran-brio.
263s Preparing to unpack .../44-r-cran-brio_1.1.5-1_arm64.deb ...
263s Unpacking r-cran-brio (1.1.5-1) ...
263s Selecting previously unselected package r-cran-ps.
264s Preparing to unpack .../45-r-cran-ps_1.9.0-1_arm64.deb ...
264s Unpacking r-cran-ps (1.9.0-1) ...
264s Selecting previously unselected package r-cran-r6.
264s Preparing to unpack .../46-r-cran-r6_2.6.1-1_all.deb ...
264s Unpacking r-cran-r6 (2.6.1-1) ...
264s Selecting previously unselected package r-cran-processx.
264s Preparing to unpack .../47-r-cran-processx_3.8.6-1_arm64.deb ...
264s Unpacking r-cran-processx (3.8.6-1) ...
264s Selecting previously unselected package r-cran-callr.
264s Preparing to unpack .../48-r-cran-callr_3.7.6-1_all.deb ...
264s Unpacking r-cran-callr (3.7.6-1) ...
264s Selecting previously unselected package r-cran-cli.
264s Preparing to unpack .../49-r-cran-cli_3.6.4-1_arm64.deb ...
264s Unpacking r-cran-cli (3.6.4-1) ...
264s Selecting previously unselected package r-cran-crayon.
264s Preparing to unpack .../50-r-cran-crayon_1.5.3-1_all.deb ...
264s Unpacking r-cran-crayon (1.5.3-1) ...
264s Selecting previously unselected package r-cran-desc.
264s Preparing to unpack .../51-r-cran-desc_1.4.3-1_all.deb ...
264s Unpacking r-cran-desc (1.4.3-1) ...
264s Selecting previously unselected package r-cran-diffobj.
264s Preparing to unpack .../52-r-cran-diffobj_0.3.5-1_arm64.deb ...
264s Unpacking r-cran-diffobj (0.3.5-1) ...
264s Selecting previously unselected package r-cran-digest.
264s Preparing to unpack .../53-r-cran-digest_0.6.37-1_arm64.deb ...
264s Unpacking r-cran-digest (0.6.37-1) ...
264s Selecting previously unselected package r-cran-evaluate.
264s Preparing to unpack .../54-r-cran-evaluate_1.0.3-1_all.deb ...
264s Unpacking r-cran-evaluate (1.0.3-1) ...
264s Selecting previously unselected package r-cran-fs.
264s Preparing to unpack .../55-r-cran-fs_1.6.5+dfsg-1_arm64.deb ...
264s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
264s Selecting previously unselected package r-cran-glue.
264s Preparing to unpack .../56-r-cran-glue_1.8.0-1_arm64.deb ...
264s Unpacking r-cran-glue (1.8.0-1) ...
264s Selecting previously unselected package r-cran-jsonlite.
264s Preparing to unpack .../57-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ...
264s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
264s Selecting previously unselected package r-cran-rlang.
264s Preparing to unpack .../58-r-cran-rlang_1.1.5-1_arm64.deb ...
264s Unpacking r-cran-rlang (1.1.5-1) ...
264s Selecting previously unselected package r-cran-lifecycle.
264s Preparing to unpack .../59-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
264s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
264s Selecting previously unselected package r-cran-magrittr.
264s Preparing to unpack .../60-r-cran-magrittr_2.0.3-1_arm64.deb ...
264s Unpacking r-cran-magrittr (2.0.3-1) ...
264s Selecting previously unselected package r-cran-pkgbuild.
264s Preparing to unpack .../61-r-cran-pkgbuild_1.4.6-1_all.deb ...
264s Unpacking r-cran-pkgbuild (1.4.6-1) ...
264s Selecting previously unselected package r-cran-rprojroot.
264s Preparing to unpack .../62-r-cran-rprojroot_2.0.4-2_all.deb ...
264s Unpacking r-cran-rprojroot (2.0.4-2) ...
264s Selecting previously unselected package r-cran-withr.
264s Preparing to unpack .../63-r-cran-withr_3.0.2+dfsg-1_all.deb ...
264s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
264s Selecting previously unselected package r-cran-pkgload.
264s Preparing to unpack .../64-r-cran-pkgload_1.4.0-1_all.deb ...
264s Unpacking r-cran-pkgload (1.4.0-1) ...
264s Selecting previously unselected package r-cran-praise.
264s Preparing to unpack .../65-r-cran-praise_1.0.0-4build1_all.deb ...
264s Unpacking r-cran-praise (1.0.0-4build1) ...
264s Selecting previously unselected package r-cran-waldo.
264s Preparing to unpack .../66-r-cran-waldo_0.6.1-2_all.deb ...
264s Unpacking r-cran-waldo (0.6.1-2) ...
264s Selecting previously unselected package r-cran-testthat.
264s Preparing to unpack .../67-r-cran-testthat_3.2.3-1_arm64.deb ...
264s Unpacking r-cran-testthat (3.2.3-1) ...
265s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
265s Setting up libpixman-1-0:arm64 (0.44.0-3) ...
265s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ...
265s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
265s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ...
265s Setting up libdatrie1:arm64 (0.2.13-3build1) ...
265s Setting up libxcb-render0:arm64 (1.17.0-2) ...
265s Setting up unzip (6.0-28ubuntu6) ...
265s Setting up x11-common (1:7.7+23ubuntu3) ...
265s Setting up libdeflate0:arm64 (1.23-1) ...
265s Setting up libxcb-shm0:arm64 (1.17.0-2) ...
265s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ...
265s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ...
265s Setting up zip (3.0-14ubuntu2) ...
265s Setting up libblas3:arm64 (3.12.1-2) ...
265s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
265s Setting up fonts-dejavu-mono (2.37-8) ...
265s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ...
265s Setting up fonts-dejavu-core (2.37-8) ...
265s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
265s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ...
265s Setting up libwebp7:arm64 (1.5.0-0.1) ...
265s Setting up libharfbuzz0b:arm64 (10.2.0-1) ...
265s Setting up libthai-data (0.1.29-2build1) ...
265s Setting up libxss1:arm64 (1:1.2.3-1build3) ...
265s Setting up libpaper2:arm64 (2.2.5-0.3) ...
265s Setting up xdg-utils (1.2.1-2ubuntu1) ...
265s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
265s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
265s Setting up libice6:arm64 (2:1.1.1-1) ...
265s Setting up liblapack3:arm64 (3.12.1-2) ...
265s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
265s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
265s Setting up libpaper-utils (2.2.5-0.3) ...
265s Setting up libthai0:arm64 (0.1.29-2build1) ...
265s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
265s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ...
265s Setting up libsm6:arm64 (2:1.2.4-1) ...
265s Setting up fontconfig (2.15.0-2ubuntu1) ...
267s Regenerating fonts cache... done.
267s Setting up libxft2:arm64 (2.3.6-1build1) ...
267s Setting up libtk8.6:arm64 (8.6.16-1) ...
267s Setting up libpango-1.0-0:arm64 (1.56.2-1) ...
267s Setting up libcairo2:arm64 (1.18.2-2) ...
267s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ...
267s Setting up libpangoft2-1.0-0:arm64 (1.56.2-1) ...
267s Setting up libpangocairo-1.0-0:arm64 (1.56.2-1) ...
267s Setting up r-base-core (4.4.3-1) ...
267s Creating config file /etc/R/Renviron with new version
268s Setting up r-cran-crayon (1.5.3-1) ...
268s Setting up r-cran-ps (1.9.0-1) ...
268s Setting up r-cran-r6 (2.6.1-1) ...
268s Setting up r-cran-magrittr (2.0.3-1) ...
268s Setting up r-cran-fs (1.6.5+dfsg-1) ...
268s Setting up r-cran-brio (1.1.5-1) ...
268s Setting up r-cran-diffobj (0.3.5-1) ...
268s Setting up r-cran-rlang (1.1.5-1) ...
268s Setting up r-cran-withr (3.0.2+dfsg-1) ...
268s Setting up r-cran-processx (3.8.6-1) ...
268s Setting up r-cran-praise (1.0.0-4build1) ...
268s Setting up r-cran-digest (0.6.37-1) ...
268s Setting up r-cran-evaluate (1.0.3-1) ...
268s Setting up r-cran-glue (1.8.0-1) ...
268s Setting up r-cran-cli (3.6.4-1) ...
268s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
268s Setting up r-cran-rprojroot (2.0.4-2) ...
268s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
268s Setting up r-cran-waldo (0.6.1-2) ...
268s Setting up r-cran-callr (3.7.6-1) ...
268s Setting up r-cran-desc (1.4.3-1) ...
268s Setting up r-cran-pkgbuild (1.4.6-1) ...
268s Setting up r-cran-pkgload (1.4.0-1) ...
268s Setting up r-cran-testthat (3.2.3-1) ...
268s Processing triggers for libc-bin (2.41-1ubuntu2) ...
268s Processing triggers for man-db (2.13.0-1) ...
269s Processing triggers for install-info (7.1.1-1) ...
270s autopkgtest [15:28:13]: test run-unit-test: [-----------------------
270s Begin testing test-atomic.R
270s 
270s R version 4.4.3 (2025-02-28) -- "Trophy Case"
270s Copyright (C) 2025 The R Foundation for Statistical Computing
270s Platform: aarch64-unknown-linux-gnu
270s 
270s R is free software and comes with ABSOLUTELY NO WARRANTY.
270s You are welcome to redistribute it under certain conditions.
270s Type 'license()' or 'licence()' for distribution details.
270s 
270s R is a collaborative project with many contributors.
270s Type 'contributors()' for more information and
270s 'citation()' on how to cite R or R packages in publications.
270s 
270s Type 'demo()' for some demos, 'help()' for on-line help, or
270s 'help.start()' for an HTML browser interface to help.
270s Type 'q()' to quit R.
270s 
271s > NAME <- "atomic"
271s > source(file.path('_helper', 'init.R'))
271s > 
271s > # - Basic Tests
271s > 
271s > all.equal(as.character(diffPrint(chr.1, chr.2)), rdsf(100))
271s [1] TRUE
271s > all.equal(
271s +   as.character(diffPrint(chr.1, chr.2, mode="unified")), rdsf(200)
271s + )
271s [1] TRUE
271s > all.equal(
271s +   as.character(diffPrint(chr.1, chr.2, mode="context")), rdsf(400)
271s + )
271s [1] TRUE
271s > all.equal(
271s +   as.character(diffPrint(chr.1[2:3], chr.2[2], mode="sidebyside")), rdsf(500)
271s + )
271s [1] TRUE
271s > # Check that `extra` works
271s > 
271s > all.equal(
271s +   as.character(
271s +     diffPrint(chr.1, chr.2, mode="unified", extra=list(quote=FALSE))
271s +   ),
271s +   rdsf(600)
271s + )
271s [1] TRUE
271s > # make sure blanks line up correctly
271s > 
271s > all.equal(
271s +   as.character(diffPrint(chr.3, chr.4)), rdsf(700)
271s + )
271s [1] TRUE
271s > all.equal(
271s +   as.character(diffPrint(chr.3, chr.4, mode="unified")), rdsf(800)
271s + )
271s [1] TRUE
271s > 
271s > # - Word wrap in atomic
271s > 
271s > A <- A.1 <- B <- c(letters, LETTERS)
271s > B[15] <- "Alabama"
271s > A.1[5] <- "Ee"
271s > C <- A[-15]
271s > D <- C
271s > E <- B[-45]
271s > 
271s > # Test simple changes to vectors; at 80 columns removing 1:8 corresponds to
271s > # row deletion
271s > 
271s > all.equal(as.character(diffPrint(A[-(1:8)], A)), rdsf(900))
271s [1] TRUE
271s > all.equal(as.character(diffPrint(A, A[-(1:8)])), rdsf(1000))
271s [1] TRUE
271s > 
271s > all.equal(as.character(diffPrint(A[-1], A[-2])), rdsf(1100))
271s [1] TRUE
271s > 
271s > # Replace single word
271s > 
271s > all.equal(as.character(diffPrint(A, B)), rdsf(1200))
271s [1] TRUE
271s > all.equal(as.character(diffPrint(B, A)), rdsf(1250))
271s [1] TRUE
271s > 
271s > # Make sure turning off word.diff also turns of unwrapping, but that we can
271s > # turn off unwrapping without turning off word diff
271s > 
271s > all.equal(
271s +   as.character(diffPrint(A, B, word.diff=FALSE)), rdsf(1300)
271s + )
271s [1] TRUE
271s > all.equal(
271s +   as.character(diffPrint(A, B, unwrap.atomic=FALSE)), rdsf(1400)
271s + )
271s [1] TRUE
271s > # Different wrap frequency and removed words that span lines
271s > 
271s > all.equal(
271s +   as.character(diffPrint(A, A.1[-(13:18)])), rdsf(1425)
271s + )
271s [1] TRUE
271s > # Removing words
271s > 
271s > all.equal(as.character(diffPrint(C, B)), rdsf(1450))
271s [1] TRUE
271s > 
271s > # Two hunks
271s > 
271s > all.equal(as.character(diffPrint(D, E)), rdsf(1500))
272s [1] TRUE
272s > all.equal(as.character(diffPrint(E, D)), rdsf(1600))
272s [1] TRUE
272s > 
272s > # Vignette example
272s > 
272s > state.abb.2 <- state.abb
272s > state.abb.2[38] <- "Pennsylvania"
272s > 
272s > all.equal(
272s +   as.character(diffPrint(state.abb, state.abb.2)), rdsf(1700)
272s + )
272s [1] TRUE
272s > # Number corner cases
272s > 
272s > all.equal(as.character(diffPrint(1:100, 2:101)), rdsf(1800))
272s [1] TRUE
272s > all.equal(as.character(diffPrint(2:101, 1:100)), rdsf(1900))
272s [1] TRUE
272s > all.equal(
272s +   as.character(diffPrint(2:101, (1:100)[-9])), rdsf(2000)
272s + )
272s [1] TRUE
272s > all.equal(
272s +   as.character(diffPrint((2:101)[-98], (1:100)[-9])), rdsf(2100)
272s + )
272s [1] TRUE
272s > # This is one of those that a better in-hunk align algorithm would benefit
272s > 
272s > int.1 <- int.2 <- 1:100
272s > int.2[c(8, 20, 60)] <- 99
272s > int.2 <- c(50:1, int.2)
272s > all.equal(as.character(diffPrint(int.1, int.2)), rdsf(2200))
272s [1] TRUE
272s > 
272s > # - with names
272s > rand.chrs <- do.call(paste0, expand.grid(LETTERS, LETTERS))
272s > F <- F1 <- F2 <- (2:105)[-98]
272s > G <- G2 <- G3 <- G4 <- G5 <- (1:100)[-9]
272s > nm.1 <- rand.chrs[seq_along(F)]
272s > nm.2 <- rand.chrs[seq_along(G)]
272s > names(F1) <- names(F2) <- nm.1
272s > names(G3) <- names(G2) <- names(G3) <-  names(G4) <- names(G5) <- nm.2
272s > names(G3)[c(5, 25, 60)] <- c("XXXXX", rand.chrs[c(300, 350)])
272s > names(G4)[c(5, 25, 60)] <- names(G5)[c(5, 25, 60)] <-
272s +   c("XX", rand.chrs[c(300, 350)])
272s > attr(F2, "blah") <- 1:5
272s > attr(G5, "blah") <- 3:8
272s > 
272s > all.equal(as.character(diffPrint(F, G)), rdsf(2300))
272s [1] TRUE
272s > all.equal(as.character(diffPrint(F1, G2)), rdsf(2400))
272s [1] TRUE
272s > 
272s > # Challenging case b/c the names wrap with values, and you have to pick one or
272s > # the other to match when the wrap frequencies are different
272s > 
272s > all.equal(as.character(diffPrint(F1, G3)), rdsf(2500))
272s [1] TRUE
272s > all.equal(as.character(diffPrint(F1, G4)), rdsf(2520))
272s [1] TRUE
272s > 
272s > # Attributes
272s > 
272s > all.equal(as.character(diffPrint(F2, G5)), rdsf(2530))
272s [1] TRUE
272s > all.equal(as.character(diffPrint(F1, G5)), rdsf(2540))
272s [1] TRUE
272s > 
272s > # - Original tests
272s > set.seed(2)
272s > w1 <- sample(
272s +   c(
272s +   "carrot", "cat", "cake", "eat", "rabbit", "holes", "the", "a", "pasta",
272s +   "boom", "noon", "sky", "hat", "blah", "paris", "dog", "snake"
272s +   ), 25, replace=TRUE
272s + )
272s > w4 <- w3 <- w2 <- w1
272s > w2[sample(seq_along(w1), 5)] <- LETTERS[1:5]
272s > w3 <- w1[8:15]
272s > w4 <- c(w1[1:5], toupper(w1[1:5]), w1[6:15], toupper(w1[1:5]))
272s > 
272s > all.equal(as.character(diffPrint(w1, w2)), rdsf(2600))
272s [1] TRUE
272s > all.equal(as.character(diffPrint(w1, w3)), rdsf(2700))
272s [1] TRUE
272s > all.equal(as.character(diffPrint(w1, w4)), rdsf(2800))
272s [1] TRUE
272s > 
272s > # - Simple word diffs
272s > a <- c("a", "b", "c", "d")
272s > b <- c("b", "c", "d", "e")
272s > all.equal(as.character(diffPrint(a, b)), rdsf(2900))
272s [1] TRUE
272s > 
272s > a <- c("x", "a", "b", "c", "d", "z")
272s > b <- c("x", "b", "c", "d", "e", "z")
272s > all.equal(as.character(diffPrint(a, b)), rdsf(3000))
272s [1] TRUE
272s > 
272s > a <- c("x", "a", "b", "c", "d", "z")
272s > b <- c("z", "b", "c", "d", "e", "x")
272s > all.equal(as.character(diffPrint(a, b)), rdsf(3100))
272s [1] TRUE
272s > 
272s > # - Alignment edge cases
272s > all.equal(
272s +   as.character(diffPrint(20:50, 30:62)), rdsf(3200)
272s + )
272s [1] TRUE
272s > # below is off; should be aligning matching context line, part of the problem
272s > # might be that we're doing the realignment without thinking about what the
272s > # other hunk has.
272s > #
272s > # Possible encode each line as hunk#:diff/mix/cont
272s > 
272s > # all.equal(
272s > #   as.character(diffPrint(20:50, 35:62)), rdsf(3300)
272s > # )
272s > 
272s > # another interesting example where the existing algo seems to lead to a
272s > # reasonable outcome
272s > 
272s > all.equal(
272s +   as.character(diffPrint(c(1:24,35:45), c(1:8, 17:45))), rdsf(3400)
272s + )
272s [1] TRUE
272s > 
272s PASS
272s Begin testing test-banner.R
272s 
272s R version 4.4.3 (2025-02-28) -- "Trophy Case"
272s Copyright (C) 2025 The R Foundation for Statistical Computing
272s Platform: aarch64-unknown-linux-gnu
272s 
272s R is free software and comes with ABSOLUTELY NO WARRANTY.
272s You are welcome to redistribute it under certain conditions.
272s Type 'license()' or 'licence()' for distribution details.
272s 
272s R is a collaborative project with many contributors.
272s Type 'contributors()' for more information and
272s 'citation()' on how to cite R or R packages in publications.
272s 
272s Type 'demo()' for some demos, 'help()' for on-line help, or
272s 'help.start()' for an HTML browser interface to help.
272s Type 'q()' to quit R.
272s 
273s > NAME <- "banner"
273s > source(file.path('_helper', 'init.R'))
273s > 
273s > # - Banner Capture ------------------------------------------------------------
273s > 
273s > ref <- as.character(
273s +   diffPrint(1 + 2, letters, tar.banner="1 + 2", cur.banner="letters")
273s + )
273s > identical(as.character(diffPrint(1 + 2, letters)), ref)
273s [1] TRUE
273s > invisible(
273s +   setMethod(
273s +     "diffPrint", c("numeric", "character"),
273s +     function(target, current, ...) callNextMethod()
273s + ) )
273s > identical(as.character(diffPrint(1 + 2, letters)), ref)
273s [1] TRUE
273s > isTRUE(
273s +   !identical(as.character(diffPrint(1 + 2, LETTERS)), ref)
273s + )
273s [1] TRUE
273s > 
273s PASS
273s Begin testing test-capture.R
273s 
273s R version 4.4.3 (2025-02-28) -- "Trophy Case"
273s Copyright (C) 2025 The R Foundation for Statistical Computing
273s Platform: aarch64-unknown-linux-gnu
273s 
273s R is free software and comes with ABSOLUTELY NO WARRANTY.
273s You are welcome to redistribute it under certain conditions.
273s Type 'license()' or 'licence()' for distribution details.
273s 
273s R is a collaborative project with many contributors.
273s Type 'contributors()' for more information and
273s 'citation()' on how to cite R or R packages in publications.
273s 
273s Type 'demo()' for some demos, 'help()' for on-line help, or
273s 'help.start()' for an HTML browser interface to help.
273s Type 'q()' to quit R.
273s 
273s > NAME <- "capture"
273s > source(file.path('_helper', 'init.R'))
273s > 
273s > # - capture width issues -------------------------------------------------------
273s > 
273s > local({
273s +   old.opt <- options(width=40L)
273s +   on.exit(options(old.opt))
273s +   etc <- new("Settings", style=StyleRaw(), text.width=5L)  # impossible width
273s +   # warn: "Unable to set desired "
273s +   res <- diffobj:::capture(letters, etc, function(...) do.call(cat, list(...)))
273s +   all.equal(nchar(res), c(40L, 40L, 36L))
273s + })
273s [1] TRUE
273s Warning message:
273s In diffobj:::capture(letters, etc, function(...) do.call(cat, list(...))) :
273s   Unable to set desired width 5, (invalid 'width' parameter, allowed 10...10000);proceeding with existing setting.
273s > 
273s > # - errors in capture ----------------------------------------------------------
273s > 
273s > etc <- new("Settings", style=StyleRaw())
273s > try(diffobj:::capture(stop('boom'), etc, function(...) stop(...))) # boom
273s Error in eval(x, etc@frame) : boom
273s Error in err("Failed attempting to get text representation of object: ",  : 
273s   Failed attempting to get text representation of object: boom
273s > print <- function() NULL
273s > str <- function() NULL
273s > etc@mode <- "auto"
273s > etc@frame <- environment()
273s > try(diffobj:::capt_print(1, 2, etc, function(...) stop(...), list())) # compose
273s Error in match.call(definition, call, expand.dots, envir) : 
273s   unused argument (x = NULL)
273s Error in err("Unable to compose `print` call") : 
273s   Unable to compose `print` call
273s > # spec object
273s > try(diffobj:::capt_str(1, 2, etc, function(...) stop(...), list(object=1)))
273s Error in err("You may not specify `object` as part of `extra`") : 
273s   You may not specify `object` as part of `extra`
273s > try(  # attempting to deparse
273s +   diffobj:::capt_deparse(
273s +     stop('a'), stop('b'), etc,  function(...) stop(...), list()
273s +   )
273s + )
273s Error in do.call(deparse, c(list(target), extra), quote = TRUE) : a
273s Error in err("Error attempting to deparse object(s)") : 
273s   Error attempting to deparse object(s)
273s > try(  # target
273s +   suppressWarnings(
273s +     diffobj:::capt_file(
273s +       tempfile(), tempfile(), etc,  function(...) stop(...), list()
273s +   ) )
273s + )
273s Error in file(con, "r") : cannot open the connection
273s Error in err("Unable to read `target` file.") : 
273s   Unable to read `target` file.
273s > local({
273s +   f <- tempfile()
273s +   on.exit(unlink(f), add=TRUE)
273s +   writeLines(letters, f)
273s +   try( # "`current`"
273s +     suppressWarnings(
273s +       diffobj:::capt_file(f, tempfile(), etc,  function(...) stop(...), list())
273s +     )
273s +   )
273s +   try( # "`target`"
273s +     suppressWarnings(
273s +       diffobj:::capt_csv(
273s +         tempfile(), tempfile(), etc,  function(...) stop(...), list()
273s +     ) )
273s +   )
273s +   try( # "`current`"
273s +     suppressWarnings(
273s +       diffobj:::capt_csv(
273s +         f, tempfile(), etc,  function(...) stop(...), list()
273s +     ) )
273s +   )
273s + })
273s Error in file(con, "r") : cannot open the connection
273s Error in err("Unable to read `current` file.") : 
273s   Unable to read `current` file.
273s Error in file(file, "rt") : cannot open the connection
273s Error in err("Unable to read `target` file.") : 
273s   Unable to read `target` file.
273s Error in file(file, "rt") : cannot open the connection
273s Error in err("Unable to read `current` file.") : 
273s   Unable to read `current` file.
273s > bad_obj <- structure(list(NULL), class='diffobj_ogewlhgiadfl3')
273s > try( # "Coercion of `target`"
273s +   diffobj:::capt_chr(bad_obj, letters, etc,  function(...) stop(...), list())
273s + )
273s Error in diffobj:::capt_chr(bad_obj, letters, etc, function(...) stop(...),  : 
273s   Coercion of `target` did not produce character object (list).
273s > try( # "Coercion of `current`"
273s +   diffobj:::capt_chr(letters, bad_obj, etc,  function(...) stop(...), list())
273s + )
273s Error in diffobj:::capt_chr(letters, bad_obj, etc, function(...) stop(...),  : 
273s   Coercion of `current` did not produce character object (list).
273s > 
273s PASS
273s Begin testing test-check.R
274s 
274s R version 4.4.3 (2025-02-28) -- "Trophy Case"
274s Copyright (C) 2025 The R Foundation for Statistical Computing
274s Platform: aarch64-unknown-linux-gnu
274s 
274s R is free software and comes with ABSOLUTELY NO WARRANTY.
274s You are welcome to redistribute it under certain conditions.
274s Type 'license()' or 'licence()' for distribution details.
274s 
274s R is a collaborative project with many contributors.
274s Type 'contributors()' for more information and
274s 'citation()' on how to cite R or R packages in publications.
274s 
274s Type 'demo()' for some demos, 'help()' for on-line help, or
274s 'help.start()' for an HTML browser interface to help.
274s Type 'q()' to quit R.
274s 
274s > NAME <- "check"
274s > source(file.path('_helper', 'init.R'))
274s > 
274s > # - is.less_flags --------------------------------------------------------------
274s > 
274s > isTRUE(diffobj:::is.less_flags("RVXF"))
274s [1] TRUE
274s > isTRUE(diffobj:::is.less_flags("rvxF"))
274s [1] TRUE
274s > identical(diffobj:::is.less_flags(c("rvxF", "RVXF")), FALSE)
274s [1] TRUE
274s > identical(diffobj:::is.less_flags(23), FALSE)
274s [1] TRUE
274s > identical(diffobj:::is.less_flags("rv xF"), FALSE)
274s [1] TRUE
274s > 
274s > # - is.int.2L ------------------------------------------------------------------
274s > 
274s > isTRUE(diffobj:::is.int.2L(1:2))
274s [1] TRUE
274s > isTRUE(diffobj:::is.int.2L(as.numeric(1:2)))
274s [1] TRUE
274s > identical(diffobj:::is.int.2L(c(1.3, 2.2)), FALSE)
274s [1] TRUE
274s > identical(diffobj:::is.int.2L(1:3), FALSE)
274s [1] TRUE
274s > identical(diffobj:::is.int.2L(c(1, NA)), FALSE)
274s [1] TRUE
274s > 
274s > # - arg.funs -------------------------------------------------------------------
274s > 
274s > isTRUE(diffobj:::is.one.arg.fun(function(x) NULL))
274s [1] TRUE
274s > isTRUE(diffobj:::is.one.arg.fun(function(x, y=5) NULL))
274s [1] TRUE
274s > 
274s > diffobj:::is.one.arg.fun(function(..., x) NULL) # "cannot have `...` as "
274s [1] "cannot have `...` as the first argument"
274s > diffobj:::is.one.arg.fun(NULL) # "is not a fun"
274s [1] "is not a function"
274s > diffobj:::is.one.arg.fun(function() NULL) # "have at least"
274s [1] "does not have at least one arguments"
274s > diffobj:::is.one.arg.fun(function(x, y) NULL) # "cannot have any"
274s [1] "cannot have any non-optional arguments other than first one"
274s > 
274s > isTRUE(diffobj:::is.two.arg.fun(function(x, y) NULL))
274s [1] TRUE
274s > isTRUE(diffobj:::is.two.arg.fun(function(x, y=5) NULL))
274s [1] TRUE
274s > 
274s > diffobj:::is.two.arg.fun(function(x, ..., y) NULL) # "cannot have `...` as "
274s [1] "cannot have `...` as one of the first two arguments"
274s > diffobj:::is.two.arg.fun(NULL) # "is not a fun"
274s [1] "is not a function"
274s > diffobj:::is.two.arg.fun(function(x) NULL) # "have at least")
274s [1] "does not have at least two arguments"
274s > diffobj:::is.two.arg.fun(function(x, y, z) NULL) # "cannot have any"
274s [1] "cannot have any non-optional arguments other than first two"
274s > 
274s > # - valid_object ---------------------------------------------------------------
274s > 
274s > s.h <- StyleHtml()
274s > s.h@wrap <- TRUE
274s > try(diffobj:::valid_object(s.h, "style", stop)) #an invalid `StyleHtml` object
274s Error in diffobj:::valid_object(s.h, "style", stop) : 
274s   Argument `style` is an invalid `StyleHtml` object because: - slot `wrap` must be FALSE for `styleHtml` objects.
274s > 
274s > pal <- PaletteOfStyles()
274s > pal["html", "light", "yb"] <- list(s.h)
274s > try(# "`palette.of.styles` is an invalid"
274s +   diffChr(
274s +     "A", "B", palette.of.styles=pal, style="auto", format="html",
274s +     brightness="light", color.mode="yb"
274s +   )
274s + )
274s Error in diffChr(target = "A", current = "B", palette.of.styles = pal,  : 
274s   Argument `palette.of.styles` is an invalid `StyleHtml` because it contains and invalid `Style` object: - slot `wrap` must be FALSE for `styleHtml` objects.
274s > # - brightness -----------------------------------------------------------------
274s > 
274s > try(diffPrint(1:3, 3:6, brightness=NA)) # "must be character"
274s Error in diffPrint(target = 1:3, current = 3:6, brightness = NA) : 
274s   Argument `brightness` must be character and not contain NAs
274s > try(diffPrint(1:3, 3:6, brightness="red")) # "may only contain values"
274s Error in diffPrint(target = 1:3, current = 3:6, brightness = "red") : 
274s   Argument `brightness` may only contain values in `c("neutral", "light", "dark")`
274s > try(diffPrint(1:3, 3:6, brightness=c(raw='light'))) # "one empty name"
274s Error in diffPrint(target = 1:3, current = 3:6, brightness = c(raw = "light")) : 
274s   Argument `brightness` must include at least one empty name `""` if it has names.
274s > try(diffPrint(1:3, 3:6, brightness=c('light', 'dark'))) # have names
274s Error in diffPrint(target = 1:3, current = 3:6, brightness = c("light",  : 
274s   Argument `brightness` must have names if it has length > 1, and those names must include at least an empty name `""` as well as names only from `c("raw", "ansi8", "ansi256", "html")`.
274s > 
274s > # - misc -----------------------------------------------------------------------
274s > 
274s > diffobj:::is.one.file.name(1) # "must be character"
274s [1] "must be character(1L) and not NA"
274s > try(diffPrint(1:3, 2:6, extra="hello")) # "must be a list"
274s Error in diffPrint(target = 1:3, current = 2:6, extra = "hello") : 
274s   Argument `extra` must be a list.
274s > try(diffPrint(1:3, 2:6, context=TRUE)) # "Argument `context` must"
274s Error in diffPrint(target = 1:3, current = 2:6, context = TRUE) : 
274s   Argument `context` must be integer(1L) and not NA, an object produced by `auto_context`, or "auto".
274s > try(diffPrint(1:3, 2:6, mode=1)) # "must be character"
274s Error in diffPrint(target = 1:3, current = 2:6, mode = 1) : 
274s   Argument `mode` must be character(1L) and in `c("auto", "unified", "context", "sidebyside")`.
274s > try(diffPrint(1:3, 2:6, tab.stops=-1)) # "strictly positive"
274s Error in diffPrint(target = 1:3, current = 2:6, tab.stops = -1) : 
274s   Argument `tab.stops` must be integer containing at least one value and with all values strictly positive
274s > try(diffPrint(1:3, 2:6, hunk.limit='hello')) # "integer vector"
274s Error in diffPrint(target = 1:3, current = 2:6, hunk.limit = "hello") : 
274s   Argument `hunk.limit` must be an integer vector of length 1 or 2 and if length 2, with the first value larger than or equal to the second.
274s > try(diffPrint(1:3, 2:6, guides='hello')) # "or a function"
274s Error in diffPrint(target = 1:3, current = 2:6, guides = "hello") : 
274s   Argument `guides` must be TRUE, FALSE, or a function
274s > try(diffPrint(1:3, 2:6, guides=function(x, y, z) NULL))# "cannot have any non"
274s Error in diffPrint(target = 1:3, current = 2:6, guides = function(x, y,  : 
274s   Argument `guides` cannot have any non-optional arguments other than first two
274s > try(diffPrint(1:3, 2:6, trim='hello')) # "TRUE, FALSE, or a function"
274s Error in diffPrint(target = 1:3, current = 2:6, trim = "hello") : 
274s   Argument `trim` must be TRUE, FALSE, or a function
274s > try(diffPrint(1:3, 2:6, trim=function(x, y, z) NULL)) # "cannot have any non"
274s Error in diffPrint(target = 1:3, current = 2:6, trim = function(x, y,  : 
274s   Argument `trim` cannot have any non-optional arguments other than first two
274s > try(diffPrint(1:3, 2:6, interactive='hello')) # "must be TRUE or"
274s Error in diffPrint(target = 1:3, current = 2:6, interactive = "hello") : 
274s   Argument `interactive` must be TRUE or FALSE.
274s > try(diffPrint(1:3, 2:6, max.diffs=1:10)) # "must be integer"
274s Error in diffPrint(target = 1:3, current = 2:6, max.diffs = 1:10) : 
274s   Argument `max.diffs` must be integer(1L) and not NA.
274s > try(diffPrint(1:3, 2:6, tar.banner=1:10)) # "must be atomic"
274s Error in diffPrint(target = 1:3, current = 2:6, tar.banner = 1:10) : 
274s   Argument `tar.banner` must be atomic and length(1L), NULL, a symbol, or a call
274s > try(diffPrint(1:3, 2:6, style=1:10)) # "must be \"auto\", a"
274s Error in diffPrint(target = 1:3, current = 2:6, style = 1:10) : 
274s   Argument `style` must be "auto", a `Style` object, or a list.
274s > try(diffPrint(1:3, 2:6, pager=1:10)) # "must be one of"
274s Error in diffPrint(target = 1:3, current = 2:6, pager = 1:10) : 
274s   Argument `pager` must be one of `c("auto", "off", "on")`, a `Pager` object, or a list.
274s > try(diffPrint(1:3, 2:6, format=1:10)) # "must be character"
274s Error in diffPrint(target = 1:3, current = 2:6, format = 1:10) : 
274s   Argument `format` must be character(1L) and not NA
274s > try(diffPrint(1:3, 2:6, palette.of.styles=1:10)) # "must be a `PaletteOfStyles`"
274s Error in diffPrint(target = 1:3, current = 2:6, palette.of.styles = 1:10) : 
274s   Argument `palette.of.styles` must be a `PaletteOfStyles` object.
274s > try(diffChr(letters, LETTERS, context=NA)) # "must be integer"
274s Error in diffChr(target = letters, current = LETTERS, context = NA) : 
274s   Argument `context` must be integer(1L) and not NA, an object produced by `auto_context`, or "auto".
274s > 
274s > 
274s > 
274s PASS
274s Begin testing test-context.R
274s 
274s R version 4.4.3 (2025-02-28) -- "Trophy Case"
274s Copyright (C) 2025 The R Foundation for Statistical Computing
274s Platform: aarch64-unknown-linux-gnu
274s 
274s R is free software and comes with ABSOLUTELY NO WARRANTY.
274s You are welcome to redistribute it under certain conditions.
274s Type 'license()' or 'licence()' for distribution details.
274s 
274s R is a collaborative project with many contributors.
274s Type 'contributors()' for more information and
274s 'citation()' on how to cite R or R packages in publications.
274s 
274s Type 'demo()' for some demos, 'help()' for on-line help, or
274s 'help.start()' for an HTML browser interface to help.
274s Type 'q()' to quit R.
274s 
274s > NAME <- "context"
274s > source(file.path('_helper', 'init.R'))
274s > 
274s > # - interesting context values -------------------------------------------------
274s > 
274s > all.equal(
274s +   as.character(diffChr(chr.9, chr.10, context=0)),
274s +   rdsf(100)
274s + )
274s [1] TRUE
274s > all.equal(
274s +   as.character(diffChr(chr.9, chr.10, context=-1L)),
274s +   rdsf(150)
274s + )
275s [1] TRUE
275s > all.equal(
275s +   as.character(diffChr(chr.9, chr.10, context="auto")),
275s +   rdsf(200)
275s + )
275s [1] TRUE
275s > all.equal(
275s +   as.character(diffChr(chr.9, chr.10, context=0, mode="context")), rdsf(300)
275s + )
275s [1] TRUE
275s > # - with line limit ------------------------------------------------------------
275s > 
275s > all.equal(
275s +   as.character(diffChr(chr.9, chr.10, context="auto", line.limit=18)),
275s +   rdsf(400)
275s + )
275s [1] TRUE
275s > all.equal(
275s +   as.character(diffChr(chr.9, chr.10, context="auto", line.limit=25)),
275s +   rdsf(500)
275s + )
275s [1] TRUE
275s > # default to min context
275s > 
275s > a <- b <- letters
275s > b[c(3, 20)] <- LETTERS[c(3,20)]
275s > all.equal(
275s +   capture.output(
275s +     show(diffChr(a, b, line.limit=c(20, 10), context='auto', format='raw'))
275s +   ),
275s +   txtf(100)
275s + )
275s [1] TRUE
275s > # trim hunks in auto-context mode
275s > 
275s > a <- b <- letters
275s > b[c(3, 10, 20)] <- LETTERS[c(3,10,20)]
275s > all.equal(
275s +   capture.output(show(
275s +     diffChr(
275s +       a, b, hunk.limit=c(2, 1), context=auto_context(1, 5), line.limit=20,
275s +       format='raw'
275s +     )
275s +   )),
275s +   txtf(200)
275s + )
275s [1] TRUE
275s > # - error handling -------------------------------------------------------------
275s > 
275s > try(auto_context(min=-1, max=1:3)) # "`min` must be"
275s Error in auto_context(min = -1, max = 1:3) : 
275s   Argument `min` must be integer(1L) and greater than zero
275s > try(auto_context(min=1, max=1:3)) # "`max` must be"
275s Error in auto_context(min = 1, max = 1:3) : 
275s   Argument `max` must be integer(1L) and not NA
275s > 
275s > 
275s PASS
275s Begin testing test-core.R
275s 
275s R version 4.4.3 (2025-02-28) -- "Trophy Case"
275s Copyright (C) 2025 The R Foundation for Statistical Computing
275s Platform: aarch64-unknown-linux-gnu
275s 
275s R is free software and comes with ABSOLUTELY NO WARRANTY.
275s You are welcome to redistribute it under certain conditions.
275s Type 'license()' or 'licence()' for distribution details.
275s 
275s R is a collaborative project with many contributors.
275s Type 'contributors()' for more information and
275s 'citation()' on how to cite R or R packages in publications.
275s 
275s Type 'demo()' for some demos, 'help()' for on-line help, or
275s 'help.start()' for an HTML browser interface to help.
275s Type 'q()' to quit R.
275s 
275s > NAME <- "core"
275s > source(file.path('_helper', 'init.R'))
275s > 
275s > # The Myers paper strings
275s > 
275s > A <- c("a", "b", "c", "a", "b", "b", "a")
275s > B <- c("c", "b", "a", "b", "a", "c")
275s > 
275s > # - diff myers simple ----------------------------------------------------------
275s > 
275s > identical(
275s +   diffobj:::myers_simple(character(), character()),
275s +   list(target = integer(0), current = integer(0))
275s + )
275s [1] TRUE
275s > identical(
275s +   diffobj:::myers_simple("a", character()),
275s +   list(target = NA_integer_, current = integer(0))
275s + )
275s [1] TRUE
275s > identical(
275s +   diffobj:::myers_simple(character(), "a"),
275s +   list(target = integer(0), current = NA_integer_)
275s + )
275s [1] TRUE
275s > identical(
275s +   diffobj:::myers_simple("a", "a"), list(target = 0L, current = 0L)
275s + )
275s [1] TRUE
275s > identical(
275s +   diffobj:::myers_simple("a", "b"),
275s +   list(target = 1L, current = 1L)
275s + )
275s [1] TRUE
275s > identical(
275s +   diffobj:::myers_simple(c("a", "b"), "b"),
275s +   list(target = c(NA, 0L), current = 0L)
275s + )
275s [1] TRUE
275s > identical(
275s +   diffobj:::myers_simple(c("a", "b"), "a"),
275s +   list(target = c(0L, NA), current = 0L)
275s + )
275s [1] TRUE
275s > identical(
275s +   diffobj:::myers_simple("a", c("a", "b")),
275s +   list(target = 0L, current = c(0L, NA))
275s + )
275s [1] TRUE
275s > identical(
275s +   diffobj:::myers_simple("b", c("a", "b")),
275s +   list(target = 0L, current = c(NA, 0L))
275s + )
275s [1] TRUE
275s > identical(
275s +   diffobj:::myers_simple(c("a", "b"), c("b", "c")),
275s +   list(target = c(NA, 0L), current = c(0L, NA))
275s + )
275s [1] TRUE
275s > identical(
275s +   diffobj:::myers_simple(c("a", "b", "c", "d"), c("a", "c", "d", "b")),
275s +   list(target = c(0L, NA, 0L, 0L), current = c(0L, 0L,  0L, NA))
275s + )
275s [1] TRUE
275s > # Actual Myers sample string
275s > identical(
275s +   diffobj:::myers_simple(A, B),
275s +   list(target = c(NA, NA, 0L, 0L, 0L, NA, 0L), current = c(0L,  NA, 0L, 0L, 0L, NA))
275s + )
275s [1] TRUE
275s > # - diff myers mba -------------------------------------------------------------
275s > 
275s > identical(ses(character(), character()), character())
275s [1] TRUE
275s > identical(ses("a", character()), "1d0")
275s [1] TRUE
275s > identical(ses(character(), "a"), "0a1")
275s [1] TRUE
275s > identical(ses("a", "a"), character())
275s [1] TRUE
275s > identical(ses("a", "b"), "1c1")
275s [1] TRUE
275s > identical(ses(c("a", "b"), "b"), "1d0")
275s [1] TRUE
275s > identical(ses(c("a", "b"), "a"), "2d1")
275s [1] TRUE
275s > identical(ses("a", c("a", "b")), "1a2")
275s [1] TRUE
275s > identical(ses("b", c("a", "b")), "0a1")
275s [1] TRUE
275s > identical(ses(c("a", "b"), c("b", "c")), c("1d0", "2a2"))
275s [1] TRUE
275s > identical(
275s +   ses(c("a", "b", "c", "d"), c("a", "c", "d", "b")), c("2d1", "4a4")
275s + )
275s [1] TRUE
275s > # Actual Myers sample string
275s > identical(ses(A, B), c("1,2d0", "4d1", "5a3", "7a6"))
275s [1] TRUE
275s > # This used to cause errors due to under-allocated buffer vector
275s > identical(ses(letters[1:10], LETTERS[1:2]), "1,10c1,2")
275s [1] TRUE
275s > 
275s > # A little more complex with changes, this was a problem at some point
275s > 
275s > A2 <- c("A", "B", "C")
275s > B2 <- c("X", "A", "Y", "C")
275s > identical(ses(A2, B2), c("0a1", "2c3"))
275s [1] TRUE
275s > 
275s > # More complicated strings; intended for use with contexts for hunks,
275s > # but making sure the diffs are correct
275s > 
275s > A1 <- c("A", "AA", "B", "C", "D", "E", "F", "G", "H")
275s > B1 <- c("A", "B", "X", "W", "D", "DD", "E", "Y", "Z")
275s > C1 <- c("X", "D", "E", "Y", "Z", "H")
275s > 
275s > identical(ses(A1, B1), c("2d1", "4c3,4", "5a6", "7,9c8,9"))
275s [1] TRUE
275s > identical(ses(A1, C1), c("1,4c1", "7,8c4,5"))
275s [1] TRUE
275s > 
275s > A5 <- c("A", "AA", "B", "C", "D", "E", "F", "G", "H")
275s > B5 <- c("A", "B",  "X", "W", "D", "E", "F", "W", "G")
275s > identical(ses(A5, B5), c("2d1", "4c3,4", "7a8", "9d9"))
275s [1] TRUE
275s > 
275s > # NAs treated as strings
275s > 
275s > identical(ses(c(NA, "a", "b"), c("a", "b", NA)), c("1d0", "3a3"))
275s [1] TRUE
275s > 
275s > # Coersion to character
275s > 
275s > identical(ses(1:5, 4:6), c("1,3d0", "5a3"))
275s [1] TRUE
275s > 
275s > # - print/summary --------------------------------------------------------------
275s > capture.output(
275s +   res.1 <- summary(diffobj:::diff_myers(A, B), with.match=TRUE)
275s + )
275s [1] "    type string len offset" "1 Delete     ab   2      1"
275s [3] "2  Match      c   1      3" "3 Delete      a   1      4"
275s [5] "4  Match      b   1      5" "5 Insert      a   1      3"
275s [7] "6  Match     ba   2      6" "7 Insert      c   1      6"
275s > identical(
275s +   res.1,
275s +   structure(list(type = structure(c(3L, 1L, 3L, 1L, 2L, 1L, 2L), .Label = c("Match", 
275s + "Insert", "Delete"), class = "factor"), string = c("ab", "c", 
275s + "a", "b", "a", "ba", "c"), len = c(2L, 1L, 1L, 1L, 1L, 2L, 1L
275s + ), offset = c(1L, 3L, 4L, 5L, 3L, 6L, 6L)), class = "data.frame", row.names = c(NA, 
275s + -7L))
275s + )
275s [1] TRUE
275s > capture.output(
275s +   res.2 <- summary(diffobj:::diff_myers(A, B), with.match=FALSE)
275s + )
275s [1] "    type len offset" "1 Delete   2      1" "2  Match   1      3"
275s [4] "3 Delete   1      4" "4  Match   1      5" "5 Insert   1      3"
275s [7] "6  Match   2      6" "7 Insert   1      6"
275s > identical(
275s +   res.2,
275s +   structure(list(type = structure(c(3L, 1L, 3L, 1L, 2L, 1L, 2L), .Label = c("Match", "Insert", "Delete"), class = "factor"), len = c(2L, 1L, 1L, 1L, 1L, 2L, 1L), offset = c(1L, 3L, 4L, 5L, 3L, 6L, 6L)), .Names = c("type", "len", "offset"), row.names = c(NA, -7L), class = "data.frame")
275s + )
275s [1] TRUE
275s > identical(
275s +   capture.output(print(diffobj:::diff_myers(A, B))), ses(A, B)
275s + )
275s [1] TRUE
275s > #  # - translate
275s > #    aa <- c("a", "b", "b", "c", "e")
275s > #    bb <- c("x", "y", "c", "f", "e")
275s > #    identical(
275s > #      diffobj:::diffObjCompact(diffobj:::diff_myers(A, B)),
275s > #      list(target = c(NA, NA, 0L, NA, 0L, 0L, 0L), current = c(0L, 0L, NA, 0L, 0L, NA))
275s > #    )
275s > #    identical(
275s > #      diffobj:::diffObjCompact(diffobj:::diff_myers(aa, bb)),
275s > #      list(target = c(1L, 2L, NA, 0L, 0L), current = c(1L, 2L, 0L, NA, 0L))
275s > #    )
275s > #
275s > #  } )
275s > 
275s PASS
275s Begin testing test-diffChr.R
275s 
275s R version 4.4.3 (2025-02-28) -- "Trophy Case"
275s Copyright (C) 2025 The R Foundation for Statistical Computing
275s Platform: aarch64-unknown-linux-gnu
275s 
275s R is free software and comes with ABSOLUTELY NO WARRANTY.
275s You are welcome to redistribute it under certain conditions.
275s Type 'license()' or 'licence()' for distribution details.
275s 
275s R is a collaborative project with many contributors.
275s Type 'contributors()' for more information and
275s 'citation()' on how to cite R or R packages in publications.
275s 
275s Type 'demo()' for some demos, 'help()' for on-line help, or
275s 'help.start()' for an HTML browser interface to help.
275s Type 'q()' to quit R.
275s 
276s > NAME <- "diffChr"
276s > source(file.path('_helper', 'init.R'))
276s > 
276s > # - Corner Cases ---------------------------------------------------------------
276s > 
276s > # Corner cases from https://neil.fraser.name/writing/diff/
276s > # Both of these appear handled correctly by the algorithm here
276s > # first one: suboptimal edit script due to two sided approach
276s > 
276s > A1 <- c("X", "A", "X", "C", "X", "A", "B", "C")
276s > B1 <- c("A", "B", "C", "Y")
276s > all.equal(as.character(diffChr(A1, B1)), rdsf(100))
276s [1] TRUE
276s > 
276s > # second one: failure to find intersection at ends of paths (paths run into
276s > # each other eventually)
276s > 
276s > A2 <- c("A", "B", "X", "A", "B")
276s > B2 <- c("A", "Y", "B")
276s > all.equal(as.character(diffChr(A2, B2)), rdsf(200))
276s [1] TRUE
276s > 
276s > # Simple corner cases
276s > 
276s > all.equal(
276s +   as.character(diffChr(character(), character())), rdsf(225)
276s + )
276s [1] TRUE
276s > all.equal(as.character(diffChr("", "")), rdsf(250))
276s [1] TRUE
276s > 
276s > # - Larger strings -------------------------------------------------------------
276s > 
276s > # diffChr(X[1:2000], X[2001:4000])
276s > 
276s > all.equal(as.character(diffChr(chr.7, chr.8)), rdsf(300))
276s [1] TRUE
276s > 
276s > # Too slow to run; useful for benchmarking though
276s > 
276s > # X1 <- X[1:2e4]
276s > # X2 <- X1[-sample(seq_along(X1), 2e3)]
276s > # X2[sample(seq_along(X2), 4e3)] <- "XXXXXX"
276s > # res <- diffChr(X1, X2)
276s > # res <- diffChr(X[1:10000], X[7500:17500])
276s > # res <- ses(X[1:10000], X[7500:17500])
276s > # res <- diffChr(X[1:25000], X[10001:50000], max.diffs=65000)
276s > 
276s > # - Sentences
276s > chr.5 <- c(
276s +   "hello there how are you doing",
276s +   "humpty dumpty took a big fall",
276s +   "lorem ipsum dolor sic est boom",
276s +   "a computer once wrote a phrase"
276s + )
276s > chr.6 <- c(
276s +   "hello THERE how are you doing",
276s +   "and another SENTENCE blah blah",
276s +   "humpty dumpty TOOK a big fall",
276s +   "a COMPUTER once wrote a phrase"
276s + )
276s > all.equal(as.character(diffChr(chr.5, chr.6)), rdsf(400))
276s [1] TRUE
276s > all.equal(
276s +   as.character(diffChr(chr.5, chr.6, mode="unified")), rdsf(500)
276s + )
276s [1] TRUE
276s > all.equal(
276s +   as.character(diffChr(chr.5, chr.6, mode="context")), rdsf(600)
276s + )
276s [1] TRUE
276s > # - Whitespace -----------------------------------------------------------------
276s > 
276s > all.equal(
276s +   as.character(diffChr(c("a", "b", "c"), c("a ", "b", "c"))), rdsf(800)
276s + )
276s [1] TRUE
276s > all.equal(
276s +   as.character(
276s +     diffChr(c("a", "b", "c"), c("a ", "b", "c"), ignore.white.space=FALSE)
276s +   ),
276s +   rdsf(900)
276s + )
276s [1] TRUE
276s > # New lines count as new elements
276s > all.equal(
276s +   as.character(diffChr("woo\nhoo\nfoo", c("woo", "foo"))), rdsf(1000)
276s + )
276s [1] TRUE
276s > all.equal(
276s +   capture.output(diffChr("hello . world", "hello.  world", format='raw')),
276s +   txtf(100)
276s + )
276s [1] TRUE
276s > # - SGR ------------------------------------------------------------------------
276s > 
276s > a <- c("hello \033[31mworld\033[m", "umbrellas", "tomatoes")
276s > b <- c("hello world", "umbrellas", "tomatoes")
276s > 
276s > local({
276s +   old.opt <- options(diffobj.sgr.supported=TRUE)
276s +   on.exit(options(old.opt))
276s +   diff <- diffChr(a, b) # warn: 'contained ANSI CSI SGR'
276s +   try(diffChr(a, b, strip.sgr=1:3)) # "TRUE, FALSE, or NULL"
276s +   try(diffChr(a, b, sgr.supported=1:3)) # "TRUE, FALSE, or NULL"
276s + 
276s +   c(
276s +     all.equal(capture.output(show(diff)), txtf(200)),
276s +     all.equal(capture.output(show(diffChr(a, b, strip.sgr=FALSE))), txtf(300)),
276s +     all.equal(capture.output(show(diffChr(a, b, format='raw'))), txtf(400))
276s +   )
276s + })
276s Error in diffChr(target = a, current = b, strip.sgr = 1:3) : 
276s   Argument `strip.sgr` must be TRUE, FALSE, or NULL
276s In addition: Warning message:
276s In diffChr(target = a, current = b) :
276s   `target` or `current` contained ANSI CSI SGR when rendered; these were stripped.  Use `strip.sgr=FALSE` to preserve them in the diffs.
276s Error in diffChr(target = a, current = b, sgr.supported = 1:3) : 
276s   Argument `sgr.supported` must be TRUE, FALSE, or NULL
276s [1] TRUE TRUE TRUE
276s > # - Alignment ------------------------------------------------------------------
276s > 
276s > chr.7 <- c("a b c d e", "F G h i j k", "xxx", "yyy", "k l m n o")
276s > chr.8 <- c("f g h i j k", "hello", "goodbye", "yo", "k l m n o")
276s > 
276s > all.equal(as.character(diffChr(chr.7, chr.8)), rdsf(1100))
276s [1] TRUE
276s > all.equal(
276s +   as.character(diffChr(chr.7, chr.8, align=4/6)), rdsf(1100) # same as above
276s + )
277s [1] TRUE
277s > # No longer aligns
277s > all.equal(
277s +   as.character(diffChr(chr.7, chr.8, align=4.01/6)), rdsf(1200)
277s + )
277s [1] TRUE
277s > all.equal(
277s +   as.character(diffChr(chr.7, chr.8, align=AlignThreshold(min.chars=4))),
277s +   rdsf(1100)  # same as earlier
277s + )
277s [1] TRUE
277s > all.equal(
277s +   as.character(diffChr(chr.7, chr.8, align=AlignThreshold(min.chars=5))),
277s +   rdsf(1200)  # same as above
277s + )
277s [1] TRUE
277s > 
277s > ## Normally this would not align, but we allow symbols to count towards
277s > ## alignment
277s > chr.7a <- c("a b c e", "d [ f g")
277s > chr.7b <- "D [ f g"
277s > a1 <- AlignThreshold(threshold=0, min.chars=2, count.alnum.only=FALSE)
277s > all.equal(
277s +   as.character(diffChr(chr.7a, chr.7b, align=a1, format='raw')),
277s +   structure(
277s +     c("< chr.7a     > chr.7b   ", "@@ 1,2 @@    @@ 1 @@    ",
277s +       "< a b c e    ~          ", "< d [ f g    > D [ f g  "), len = 4L)
277s + )
277s [1] TRUE
277s > # corner case where alignment alog exits early because it runs out of B values
277s > # to match A values to.
277s > 
277s > b <- c('a b c e', 'x w z f', 'e f g h')
277s > a <- c('z o o o', 'p o o o', 'A b c e')
277s > al <- AlignThreshold(threshold=0, min.chars=0)
277s > all.equal(
277s +   capture.output(show(diffChr(b, a, align=al, format='raw'))), txtf(500)
277s + )
277s [1] TRUE
277s > # - NAs ------------------------------------------------------------------------
277s > 
277s > all.equal(
277s +   as.character(
277s +     diffChr(c(NA, letters[1:3]), c(letters[1:3], LETTERS[1:2], NA))
277s +   ),
277s +   rdsf(1300)
277s + )
277s [1] TRUE
277s > all.equal(
277s +   as.character(
277s +     diffChr(c(letters[1:3]), c(letters[1:3], LETTERS[1:2], NA))
277s +   ),
277s +   rdsf(1400)
277s + )
277s [1] TRUE
277s > all.equal(
277s +   as.character(
277s +     diffChr(c(NA, letters[1:3]), c(letters[1:3], LETTERS[1:2]))
277s +   ),
277s +   rdsf(1500)
277s + )
277s [1] TRUE
277s > # - Nested dots issue 134, h/t Noam Ross ---------------------------------------
277s > 
277s > fn <- function(target, current, ...) {
277s +   diffChr(target, current, ...)
277s + }
277s > all.equal(
277s +   as.character(fn("a", "b", format = "raw")),
277s +   structure(
277s +     c(
277s +       "< target    > current ",
277s +       "@@ 1 @@     @@ 1 @@   ",
277s +       "< a         > b       "), len = 3L
277s +   )
277s + )
277s [1] TRUE
277s > 
277s > # - Newlines in input, issue 135, h/t Flying Sheep -----------------------------
277s > 
277s > a <-     'A Time Series:\n[1] 1 2 3 4'
277s > b <-     'A Time Series:\n[1] 9 4 1 4'
277s > all.equal(
277s +   c(as.character(diffobj::diffChr(a, b, format = 'raw'))),
277s +   c("< a               > b             ",
277s +     "@@ 1,2 @@         @@ 1,2 @@       ",
277s +     "  A Time Series:    A Time Series:",
277s +     "< [1] 1 2 3 4     > [1] 9 4 1 4   ")
277s + )
277s [1] TRUE
277s > 
277s > # - Attributes causing dispatch in guides, issue 142 ---------------------------
277s > 
277s > zlold <- c("0x0000, 0x001F", "0x007F, 0x009F", "0x0300, 0x036F")
277s > zlnew <- structure(
277s +   c("0x0000, 0x001F", "0x008F, 0x009F", "0x0300, 0x036F"), .Dim = 3L
277s + )
277s > diffChr(zlold, zlnew) # no warning
277s [33m<[39m [33mzlold[39m           [34m>[39m [34mzlnew[39m         
277s [36m@@ 1,3 @@       [39m  [36m@@ 1,3 @@       [39m
277s   [90m[39m0x0000, 0x001F[90m[39m    [90m[39m0x0000, 0x001F[90m[39m
277s [33m<[39m [90m[39m[33m0x007F,[39m 0x009F[90m[39m  [34m>[39m [90m[39m[34m0x008F,[39m 0x009F[90m[39m
277s   [90m[39m0x0300, 0x036F[90m[39m    [90m[39m0x0300, 0x036F[90m[39m
277s > 
277s > # - do.call, issue 158 ---------------------------------------------------------
277s > 
277s > do.call(diffChr, list(1:2, 3:4, format='raw'))
277s < 1:2        > 3:4      
277s @@ 1,2 @@    @@ 1,2 @@  
277s < 1          > 3        
277s < 2          > 4        
277s > 
277s > 
277s PASS
277s Begin testing test-diffDeparse.R
277s 
277s R version 4.4.3 (2025-02-28) -- "Trophy Case"
277s Copyright (C) 2025 The R Foundation for Statistical Computing
277s Platform: aarch64-unknown-linux-gnu
277s 
277s R is free software and comes with ABSOLUTELY NO WARRANTY.
277s You are welcome to redistribute it under certain conditions.
277s Type 'license()' or 'licence()' for distribution details.
277s 
277s R is a collaborative project with many contributors.
277s Type 'contributors()' for more information and
277s 'citation()' on how to cite R or R packages in publications.
277s 
277s Type 'demo()' for some demos, 'help()' for on-line help, or
277s 'help.start()' for an HTML browser interface to help.
277s Type 'q()' to quit R.
277s 
277s > NAME <- "diffDeparse"
277s > source(file.path('_helper', 'init.R'))
277s > 
277s > # - deparse --------------------------------------------------------------------
277s > 
277s > # First one will be done in unified mode since `deparse` disregards
277s > # option(width=), second will be done side by side
277s > 
277s > all.equal(as.character(diffDeparse(letters, LETTERS)), rdsf(100))
277s [1] TRUE
277s > all.equal(
277s +   as.character(
277s +     diffDeparse(letters, LETTERS, extra=list(width.cutoff=20))
277s +   ),
277s +   rdsf(200)
277s + )
277s [1] TRUE
277s > 
277s PASS
277s Begin testing test-diffObj.R
277s 
277s R version 4.4.3 (2025-02-28) -- "Trophy Case"
277s Copyright (C) 2025 The R Foundation for Statistical Computing
277s Platform: aarch64-unknown-linux-gnu
277s 
277s R is free software and comes with ABSOLUTELY NO WARRANTY.
277s You are welcome to redistribute it under certain conditions.
277s Type 'license()' or 'licence()' for distribution details.
277s 
277s R is a collaborative project with many contributors.
277s Type 'contributors()' for more information and
277s 'citation()' on how to cite R or R packages in publications.
277s 
277s Type 'demo()' for some demos, 'help()' for on-line help, or
277s 'help.start()' for an HTML browser interface to help.
277s Type 'q()' to quit R.
277s 
278s > NAME <- "diffObj"
278s > source(file.path('_helper', 'init.R'))
278s > 
278s > # - simple diffobj -------------------------------------------------------------
278s > 
278s > # no diff for print
278s > all.equal(as.character(diffObj(iris.s, iris.c)), rdsf(100))
278s [1] TRUE
278s > # no diff for str
278s > all.equal(
278s +   as.character(diffObj(1:100, c(1:99, 200L))), rdsf(200)
278s + )
278s [1] TRUE
278s > # diffs for both and must pick one, first one is str, second is print
278s > all.equal(
278s +   as.character(diffObj(mdl1[7], mdl2[7])), rdsf(300)
278s + )
278s [1] TRUE
278s > all.equal(as.character(diffObj(mdl1, mdl2)), rdsf(400))
278s [1] TRUE
278s > 
278s > # - fits or doesn't ------------------------------------------------------------
278s > 
278s > # Note, the first test used to favor str until we handicapped print
278s > all.equal(
278s +   diffObj(matrix(1:20, ncol=2), matrix(2:21, ncol=2), line.limit=5)@capt.mode,
278s +   "str"
278s + )
278s [1] TRUE
278s > # test kinda slow, would be better to have one with smaller objects with print
278s > # methods
278s > 
278s > all.equal(
278s +   diffObj(mdl1, mdl2, line.limit=15, mode='unified')@capt.mode, "print"
278s + )
279s [1] TRUE
279s > all.equal(diffObj(1:1000, 1000:1, line.limit=5)@capt.mode, "str")
279s [1] TRUE
279s > 
279s > # - misc -----------------------------------------------------------------------
279s > 
279s > try(diffObj(1, 2, extra=list(TRUE))) # "extra"
279s Error in .local(target, current, ...) : 
279s   Argument `extra` must be empty in `diffObj`.
279s > 
279s > # - print error ----------------------------------------------------------------
279s > 
279s > x <- structure("hello", class="diffobj_ogewlhgiadfl")
279s > y <- structure("goodbye", class="diffobj_ogewlhgiadfl")
279s > try(diffObj(x, y)) # "Error in calling .diffPrint."
279s Error in print.diffobj_ogewlhgiadfl(structure("goodbye", class = "diffobj_ogewlhgiadfl")) : 
279s   failure
279s Error in diffObj(target = x, current = y) : 
279s   Error in calling `diffPrint`: Failed attempting to get text representation of object: failure
279s > 
279s > # Random exmaples to think through `diffObj` output
279s > 
279s > diffObj(
279s +   pairlist("`logical(2L)` should be length 2 (is 3)"),
279s +   pairlist("be length 2 (is 3)")
279s + )
279s [33m<[39m [33mpairlist("`logical(2L)` should be l..[39m  [34m>[39m [34mpairlist("be length 2 (is 3)")[39m       
279s [36m@@ 1,3 @@                              [39m  [36m@@ 1,3 @@                              [39m
279s   [90m[39m[[1]][90m[39m                                    [90m[39m[[1]][90m[39m                                
279s [33m<[39m [90m[1] [39m[33m"`logical(2L)` should be length 2[39m[90m[39m  [34m>[39m [90m[1] [39m[34m"be length 2 (is 3)"[39m[90m[39m             
279s [33m:[39m [90m[39m[33m (is 3)"[39m[90m[39m                               [90m~[39m                                      
279s                                                                                 
279s > 
279s > diffObj(
279s +   pairlist("`matrix(integer(), nrow = 3)` should be matrix (is list)", "`list(character(1L), 1L)[[2]]` should be type \"integer-like\" (is \"character\")"),
279s +   pairlist("be class \"matrix\" (is \"list\")", "be type \"integer-like\" (is \"character\") at index [[2]]")
279s + )
279s [33m<[39m [33mpairlist("`matrix(integer(), nrow =..[39m  [34m>[39m [34mpairlist("be class \"matrix\" (is \..[39m
279s [36m@@ 1,6 @@                              [39m  [36m@@ 1,6 @@                              [39m
279s   [90m[39m[[1]][90m[39m                                    [90m[39m[[1]][90m[39m                                
279s [33m<[39m [90m[1] [39m[33m"`matrix(integer(), nrow = 3)` sh[39m[90m[39m  [34m>[39m [90m[1] [39m[34m"be class \"matrix\"[39m [34m(is[39m [34m\[39m[34m"[39m[34mlist[39m[34m\[39m[34m"[39m[34m[39m[34m[39m[90m[39m
279s [33m:[39m [90m[39m[33mould be matrix (is list)"[39m[90m[39m              [34m:[39m [90m[39m[34m[39m[34m[39m[34m[39m[34m[39m[34m[39m[34m[39m[34m[39m[34m)[39m[34m"[39m[90m[39m                                   
279s                                                                                 
279s   [90m[39m[[2]][90m[39m                                    [90m[39m[[2]][90m[39m                                
279s [33m<[39m [90m[1] [39m[33m"`list(character(1L), 1L)[[2]]` s[39m[90m[39m  [34m>[39m [90m[1] [39m[34m"be type \"integer-like\"[39m (is \"c[34m[39m[34m[39m[34m[39m[90m[39m
279s [33m:[39m [90m[39m[33mhould be type \"integer-like\"[39m (is \"[90m[39m  [34m:[39m [90m[39m[34m[39mharacter\") [34mat[39m [34mindex[39m [34m[[2]][39m"[90m[39m          
279s [33m:[39m [90m[39m[33m[39mcharacter\")"[90m[39m                          [90m~[39m                                      
279s                                                                                 
279s > 
279s PASS
279s Begin testing test-diffStr.R
279s 
279s R version 4.4.3 (2025-02-28) -- "Trophy Case"
279s Copyright (C) 2025 The R Foundation for Statistical Computing
279s Platform: aarch64-unknown-linux-gnu
279s 
279s R is free software and comes with ABSOLUTELY NO WARRANTY.
279s You are welcome to redistribute it under certain conditions.
279s Type 'license()' or 'licence()' for distribution details.
279s 
279s R is a collaborative project with many contributors.
279s Type 'contributors()' for more information and
279s 'citation()' on how to cite R or R packages in publications.
279s 
279s Type 'demo()' for some demos, 'help()' for on-line help, or
279s 'help.start()' for an HTML browser interface to help.
279s Type 'q()' to quit R.
279s 
279s > NAME <- "diffStr"
279s > source(file.path('_helper', 'init.R'))
279s > 
279s > # - lm models ------------------------------------------------------------------
279s > 
279s > # formula display changed
279s > if(
279s +   R.Version()$major >= 3 && R.Version()$minor >= "3.1" || R.Version()$major > 3
279s + )
279s +   all.equal(as.character(diffStr(mdl1, mdl2)), rdsf(100))
280s [1] TRUE
280s > 
280s > # Too strict a line limit, can't get under
280s > all.equal(
280s +   as.character(diffStr(mdl1[7], mdl2[7], line.limit=10)), rdsf(200)
280s + )
280s [1] TRUE
280s > # Now we can get under
280s > all.equal(
280s +   as.character(diffStr(mdl1[7], mdl2[7], line.limit=15)), rdsf(300)
280s + )
280s [1] TRUE
280s > 
280s > # - Simple structure -----------------------------------------------------------
280s > #
280s > # Character types
280s > 
280s > all.equal(as.character(diffStr(iris.c, iris.s)), rdsf(400))
280s [1] TRUE
280s > 
280s > # - Strict width ---------------------------------------------------------------
280s > # formula display changed
280s > if(
280s +   R.Version()$major >= 3 && R.Version()$minor >= "3.1" || R.Version()$major > 3
280s + ) {
280s +   c(
280s +     all.equal(
280s +       as.character(
280s +         diffStr(mdl1, mdl2, extra=list(strict.width="wrap"), line.limit=30)
280s +       ),
280s +       rdsf(500)
280s +     ),
280s +     all.equal(
280s +       as.character(
280s +         diffStr(mdl1, mdl2, extra=list(strict.width="cut"), line.limit=30)
280s +       ),
280s +       rdsf(550)
280s +   ) )
280s + }
281s [1] TRUE TRUE
281s > # - max.diffs ------------------------------------------------------------------
281s > 
281s > invisible(diffStr(iris, mtcars, max.diffs=2)) # warn: "Exceeded diff limit"
281s Warning message:
281s Exceeded diff limit during diff computation (18 vs. 2 allowed); overall diff is likely not optimal 
281s > 
281s > # - max.level ------------------------------------------------------------------
281s > 
281s > all.equal(
281s +   as.character(diffStr(mdl1[7], mdl2[7], extra=list(max.level="auto"))),
281s +   rdsf(600)
281s + )
281s [1] TRUE
281s > all.equal(
281s +   as.character(diffStr(mdl1[7], mdl2[7], extra=list(max.level=2))),
281s +   rdsf(700)
281s + )
281s [1] TRUE
281s > # Has a difference, but can't get under; the second is just for reference
281s > 
281s > lst.1 <- lst.2 <- lst.3 <- list(a=list(b=list(c=list(d=list(e=list(25))))))
281s > names(lst.2) <- "A"
281s > 
281s > all.equal(
281s +   as.character(diffStr(lst.1, lst.2, line.limit=2)), rdsf(800)
281s + )
281s [1] TRUE
281s > all.equal(
281s +   as.character(diffStr(lst.1, lst.2, line.limit=2)), rdsf(900)
281s + )
281s [1] TRUE
281s > # Test that initial run shows difference, but too big, but next one down
281s > # doesn't so have to increase level
281s > 
281s > names(lst.3$a$b$c$d) <- "E"
281s > all.equal(
281s +   as.character(diffStr(lst.1, lst.3, line.limit=6)), rdsf(1000)
281s + )
281s [1] TRUE
281s > 
281s > # - No visible differences -----------------------------------------------------
281s > 
281s > all.equal(
281s +   as.character(diffStr(1:100, c(1:99, 101L))), rdsf(1100)
281s + )
281s [1] TRUE
281s > 
281s > # - Quoted Objects -------------------------------------------------------------
281s > 
281s > all.equal(
281s +   as.character(diffStr(quote(zz + 1), quote(zz + 3))),
281s +   structure(
281s +     c("\033[33m<\033[39m \033[33mstr(quote(zz +..\033[39m  \033[34m>\033[39m \033[34mstr(quote(zz +..\033[39m", "\033[36m@@ 1 @@           \033[39m  \033[36m@@ 1 @@           \033[39m", "\033[33m<\033[39m \033[90m\033[39m language zz + \033[33m1\033[39m\033[90m\033[39m  \033[34m>\033[39m \033[90m\033[39m language zz + \033[34m3\033[39m\033[90m\033[39m"
281s +     ), len = 3L
281s + ) )
281s [1] TRUE
281s > 
281s > all.equal(
281s +   as.character(diffStr(quote(x), quote(y))),
281s +   structure(c("\033[33m<\033[39m \033[33mstr(quo..\033[39m  \033[34m>\033[39m \033[34mstr(quo..\033[39m", "\033[36m@@ 1 @@    \033[39m  \033[36m@@ 1 @@    \033[39m", "\033[33m<\033[39m \033[90m\033[39m symbol \033[33mx\033[39m\033[90m\033[39m  \033[34m>\033[39m \033[90m\033[39m symbol \033[34my\033[39m\033[90m\033[39m"), len = 3L)
281s + )
281s [1] TRUE
281s > 
281s > # - Spaces with punctuation ----------------------------------------------------
281s > 
281s > all.equal(
281s +   capture.output(show(diffStr(list(a=1), list(a=1, cabera=3), format='raw'))),
281s +   txtf(100)
281s + )
281s [1] TRUE
281s > 
281s > 
281s PASS
281s Begin testing test-file.R
281s 
281s R version 4.4.3 (2025-02-28) -- "Trophy Case"
281s Copyright (C) 2025 The R Foundation for Statistical Computing
281s Platform: aarch64-unknown-linux-gnu
281s 
281s R is free software and comes with ABSOLUTELY NO WARRANTY.
281s You are welcome to redistribute it under certain conditions.
281s Type 'license()' or 'licence()' for distribution details.
281s 
281s R is a collaborative project with many contributors.
281s Type 'contributors()' for more information and
281s 'citation()' on how to cite R or R packages in publications.
281s 
281s Type 'demo()' for some demos, 'help()' for on-line help, or
281s 'help.start()' for an HTML browser interface to help.
281s Type 'q()' to quit R.
281s 
281s > NAME <- "diffFile"
281s > source(file.path('_helper', 'init.R'))
281s > 
281s > # - Code File ------------------------------------------------------------------
281s > 
281s > # # compare two crayon file versions
281s > # # These should eventually just be downloaded and made into diffFile tests
281s > 
281s > f.p.1 <- file.path("_helper", "objs", "diffFile", "s.o.3f1f68.R")
281s > f.p.2 <- file.path("_helper", "objs", "diffFile", "s.o.30dbe0.R")
281s > 
281s > # url.1 <- "https://raw.githubusercontent.com/gaborcsardi/crayon/3f1f68ab177b82a27e754a58264af801f7194820/R/string_operations.r"
281s > # url.2 <- "https://raw.githubusercontent.com/gaborcsardi/crayon/30dbe0d4d92157350af3cb3aeebd6d9a9cdf5c0e/R/string_operations.r"
281s > # f.1 <- readLines(url.1)
281s > # f.2 <- readLines(url.2)
281s > # writeLines(f.1, f.p.1)
281s > # writeLines(f.2, f.p.2)
281s > 
281s > all.equal(as.character(diffFile(f.p.1, f.p.2)), rdsf(100))
282s [1] TRUE
282s > 
282s > # - RDS ------------------------------------------------------------------------
282s > 
282s > f1 <- tempfile()
282s > f2 <- tempfile()
282s > 
282s > mx1 <- mx2 <- matrix(1:9, 3)
282s > mx2[5] <- 99
282s > saveRDS(mx1, f1)
282s > saveRDS(mx2, f2)
282s > 
282s > is(diffobj:::get_rds(f1), "matrix")
282s [1] TRUE
282s > is(diffobj:::get_rds(f2), "matrix")
282s [1] TRUE
282s > 
282s > ref <- as.character(diffPrint(mx1, mx2))
282s > identical(as.character(diffPrint(mx1, f2, cur.banner="mx2")), ref)
282s [1] TRUE
282s > identical(as.character(diffPrint(f1, mx2, tar.banner="mx1")), ref)
282s [1] TRUE
282s > identical(
282s +   as.character(diffPrint(f1, f2, tar.banner="mx1", cur.banner="mx2")), ref
282s + )
282s [1] TRUE
282s > isTRUE(!identical(as.character(diffPrint(mx1, f2, rds=FALSE)), ref))
282s [1] TRUE
282s > unlink(c(f1, f2))
282s > 
282s > # - file -----------------------------------------------------------------------
282s > 
282s > f1 <- tempfile()
282s > f2 <- tempfile()
282s > letters2 <- letters
282s > letters2[15] <- "HELLO"
282s > 
282s > writeLines(letters, f1)
282s > writeLines(letters2, f2)
282s > 
282s > identical(
282s +   as.character(diffChr(letters, letters2, tar.banner="f1", cur.banner="f2")),
282s +   as.character(diffFile(f1, f2))
282s + )
282s [1] TRUE
282s > unlink(c(f1, f2))
282s > 
282s > # issue 133 h/t Noam Ross, thanks for the test
282s > 
282s > x <- tempfile()
282s > y <- tempfile()
282s > cat("Hello\nthere\n", file = x)
282s > file.copy(x, y)
282s [1] TRUE
282s > identical(
282s +   as.character(diffFile(x, y, format = "raw")),
282s +   structure(
282s +     c("No visible differences between objects.",
282s +       "< x          > y        ",
282s +       "@@ 1,2 @@    @@ 1,2 @@  ",
282s +       "  Hello        Hello    ",
282s +       "  there        there    "), len = 5L)
282s + )
282s [1] TRUE
282s > unlink(c(x, y))
282s > 
282s > # - CSV ------------------------------------------------------------------------
282s > 
282s > f1 <- tempfile()
282s > f2 <- tempfile()
282s > 
282s > iris2 <- iris
282s > iris2$Sepal.Length[25] <- 9.9
282s > 
282s > write.csv(iris, f1, row.names=FALSE)
282s > write.csv(iris2, f2, row.names=FALSE)
282s > 
282s > identical(
282s +   as.character(diffPrint(iris, iris2, tar.banner="f1", cur.banner="f2")),
282s +   as.character(diffCsv(f1, f2))
282s + )
282s [1] TRUE
282s > unlink(c(f1, f2))
282s > 
282s > 
282s PASS
282s Begin testing test-guide.R
282s 
282s R version 4.4.3 (2025-02-28) -- "Trophy Case"
282s Copyright (C) 2025 The R Foundation for Statistical Computing
282s Platform: aarch64-unknown-linux-gnu
282s 
282s R is free software and comes with ABSOLUTELY NO WARRANTY.
282s You are welcome to redistribute it under certain conditions.
282s Type 'license()' or 'licence()' for distribution details.
282s 
282s R is a collaborative project with many contributors.
282s Type 'contributors()' for more information and
282s 'citation()' on how to cite R or R packages in publications.
282s 
282s Type 'demo()' for some demos, 'help()' for on-line help, or
282s 'help.start()' for an HTML browser interface to help.
282s Type 'q()' to quit R.
282s 
282s > NAME <- "guides"
282s > source(file.path('_helper', 'init.R'))
282s > 
282s > # - detect_2d_guides -----------------------------------------------------------
282s > 
282s > iris.dply <- c("Source: local data frame [150 x 5]", "Groups: Species [3]", "", "   Sepal.Length Sepal.Width", "          (dbl)       (dbl)", "1           5.1         3.5", "2           4.9         3.0", "3           4.7         3.2", "4           4.6         3.1", "5           5.0         3.6", "6           5.4         3.9", "7           4.6         3.4", "8           5.0         3.4", "9           4.4         2.9", "10          4.9         3.1", "..          ...         ...", "Variables not shown: Petal.Length", "  (dbl), Petal.Width (dbl), Species", "  (fctr)")
282s > 
282s > all.equal(diffobj:::detect_2d_guides(iris.dply), 4:5)
282s [1] TRUE
282s > # wrapping data table with separator (#96)
282s > 
282s > DT.txt <- c(
282s +  "             V1        V2        V3",
282s +  "   1: 0.3201122 0.6907066 0.5004968",
282s +  "  ---                              ",
282s +  "1000: 0.3547379 0.2836985 0.8121208",
282s +  "            V4        V5",
282s +  "   1: 0.331665 0.6788726",
282s +  "  ---                   ",
282s +  "1000: 0.553012 0.7789110"
282s + )
282s > all.equal(
282s +  diffobj:::detect_2d_guides(DT.txt),
282s +  c(1L, 5L)
282s + )
282s [1] TRUE
282s > # Narrow width
282s > 
282s > old.opt <- options(width=40)
282s > all.equal(diffobj:::detect_2d_guides(capture.output(iris)), c(1, 152))
282s [1] TRUE
282s > all.equal(
282s +   diffobj:::detect_2d_guides(capture.output(USAccDeaths)), c(1, 8, 15)
282s + )
282s [1] TRUE
282s > # Time series
282s > all.equal(diffobj:::detect_2d_guides(capture.output(UKgas)), 1)
282s [1] TRUE
282s > # no row.names (#111)
282s > 
282s > df1 <- capture.output(print(data.frame(a=1:3), row.names=FALSE))
282s > no.rn.guide <- diffobj:::detect_2d_guides(df1)  # no warning
282s > all.equal(no.rn.guide, 1L)
282s [1] TRUE
282s > 
282s > df2 <- capture.output(print(data.frame(x="A"), row.names=FALSE))
282s > no.rn.guide.2 <- diffobj:::detect_2d_guides(df2)  # no warning
282s > all.equal(no.rn.guide.2, 1L)
282s [1] TRUE
282s > options(old.opt)
282s > 
282s > # - detect_list_guides ---------------------------------------------------------
282s > 
282s > l.1 <- list(1, 1:3, matrix(1:3, 1))
282s > l.2 <- list(a=1, list(1:3, b=4, c=list(1, b=2)), matrix(1:3, 1))
282s > c.l.1 <- capture.output(l.1)
282s > c.l.2 <- capture.output(l.2)
282s > # cbind(c.l.2, seq_along(c.l.2) %in% diffobj:::detect_list_guides(c.l.2))
282s > all.equal(diffobj:::detect_list_guides(capture.output(l.1)), c(1, 4, 7))
282s [1] TRUE
282s > all.equal(
282s +   diffobj:::detect_list_guides(capture.output(l.2)),
282s +   c(1, 5, 8, 12, 15, 20)
282s + )
282s [1] TRUE
282s > 
282s > # - detect_matrix_guides -------------------------------------------------------
282s > mx3 <- mx4 <- mx5 <- mx5a <- mx11 <- matrix(
282s +  c(
282s +     "averylongwordthatcanlahblah", "causeasinglewidecolumnblah",
282s +     "matrixtowrapseveraltimes", "inarrowscreen", "onceuponatime",
282s +     "agreenduckflew", "overthemountains", "inalongofantelopes",
282s +     "ineedthreemore", "entriesactually", "nowonlytwomore", "iwaswrongearlier"
282s +   ),
282s +   nrow=3, ncol=4
282s + )
282s > mx3.c <- capture.output(mx3)
282s > all.equal(diffobj:::detect_matrix_guides(mx3.c, NULL), c(1, 5))
282s [1] TRUE
282s > 
282s > dimnames(mx4) <- list(A=NULL, B=NULL)
282s > mx4.c <- capture.output(mx4)
282s > all.equal(
282s +   diffobj:::detect_matrix_guides(mx4.c, dimnames(mx4)), c(1, 2, 6, 7)
282s + )
282s [1] TRUE
282s > attr(mx5, "blah") <- letters[1:10]
282s > mx5.c <- capture.output(mx5)
282s > all.equal(
282s +   diffobj:::detect_matrix_guides(mx5.c, dimnames(mx5)), c(1, 5)
282s + )
282s [1] TRUE
282s > # Simple matrices that don't wrap
282s > 
282s > mx6 <- mx7 <- mx7.1 <- matrix(1:4, 2)
282s > 
282s > mx6.c <- capture.output(mx6)
282s > all.equal(diffobj:::detect_matrix_guides(mx6.c, dimnames(mx6)), 1)
282s [1] TRUE
282s > 
282s > dimnames(mx7) <- list(A=letters[1:2], B=LETTERS[25:26])
282s > mx7.c <- capture.output(mx7)
282s > all.equal(diffobj:::detect_matrix_guides(mx7.c, dimnames(mx7)), c(1, 2))
282s [1] TRUE
282s > 
282s > dimnames(mx7.1) <- list(letters[1:2], B=LETTERS[25:26])
282s > mx7.1.c <- capture.output(mx7.1)
282s > all.equal(diffobj:::detect_matrix_guides(mx7.1.c, dimnames(mx7.1)), c(1, 2))
282s [1] TRUE
282s > 
282s > # Single col matrix
282s > 
282s > mx8 <- matrix(1:2, 2)
282s > 
282s > mx8.c <- capture.output(mx8)
282s > all.equal(diffobj:::detect_matrix_guides(mx8.c, dimnames(mx8)), 1)
282s [1] TRUE
282s > 
282s > # Wrapping matrices with colnames
282s > 
282s > mx9 <- mx3
282s > dimnames(mx9) <- list(A=letters[1:3], B=LETTERS[20:23])
282s > mx9.c <- capture.output(mx9)
282s > all.equal(
282s +   diffobj:::detect_matrix_guides(mx9.c, dimnames(mx9)), c(1:2, 6:7)
282s + )
282s [1] TRUE
282s > 
282s > mx10 <- mx9
282s > attr(mx10, "blah") <- matrix(1:4, 2)
282s > mx10.c <- capture.output(mx10)
282s > all.equal(
282s +   diffobj:::detect_matrix_guides(mx10.c, dimnames(mx10)), c(1:2, 6:7)
282s + )
282s [1] TRUE
282s > local({
282s +   old.opt <- options(width=30L)
282s +   on.exit(options(old.opt))
282s +   attr(mx11, "blah") <- letters[1:15]
282s +   mx11.c <- capture.output(mx11)
282s + 
282s +   all.equal(
282s +     diffobj:::detect_matrix_guides(mx11.c, dimnames(mx11)), c(1, 5, 9, 13)
282s +   )
282s + })
282s [1] TRUE
282s > # - detect_array_guides --------------------------------------------------------
282s > 
282s > a.1 <- array(1:6, dim=c(2, 1, 3))
282s > a.2 <- array(1:6, dim=c(2, 1, 3), dimnames=list(NULL, "X", LETTERS[1:3]))
282s > a.3 <- array(
282s +   1:6, dim=c(2, 1, 3),
282s +   dimnames=list(rows=NULL, cols="X", LETTERS[1:3])
282s + )
282s > a.4 <- `attr<-`(a.3, "hello", "random attribute")
282s > a.5 <- array(1:36, dim=c(6, 2, 3))
282s > a.6 <- array(1:2, c(2, 1, 1))
282s > c.a.1 <- capture.output(a.1)
282s > c.a.2 <- capture.output(a.2)
282s > c.a.3 <- capture.output(a.3)
282s > c.a.4 <- capture.output(a.4)
282s > c.a.5 <- capture.output(a.5)
282s > c.a.6 <- capture.output(a.6)
282s > # helper funs to vizualize the guide line detection
282s > # viz_dag <- function(capt, obj)
282s > #   cbind(
282s > #     capt,
282s > #     seq_along(capt) %in% diffobj:::detect_array_guides(capt, dimnames(obj))
282s > #   )
282s > # viz_dag(c.a.1, a.1)
282s > # viz_dag(c.a.2, a.2)
282s > # viz_dag(c.a.3, a.3)
282s > # viz_dag(c.a.4, a.4)
282s > # viz_dag(c.a.5, a.5)
282s > # viz_dag(c.a.6, a.6)
282s > all.equal(
282s +   diffobj:::detect_array_guides(c.a.1, dimnames(a.1)),
282s +   c(1L, 2L, 7L, 8L, 13L, 14L)
282s + )
282s [1] TRUE
282s > all.equal(
282s +   diffobj:::detect_array_guides(c.a.2, dimnames(a.2)),
282s +   c(1L, 2L, 7L, 8L, 13L, 14L)
282s + )
282s [1] TRUE
282s > all.equal(
282s +   diffobj:::detect_array_guides(c.a.3, dimnames(a.3)),
282s +   c(1L, 2L, 8L, 9L, 15L, 16L)
282s + )
282s [1] TRUE
282s > all.equal(
282s +   diffobj:::detect_array_guides(c.a.4, dimnames(a.4)),
282s +   c(1L, 2L, 8L, 9L, 15L, 16L)
282s + )
282s [1] TRUE
282s > all.equal(
282s +   diffobj:::detect_array_guides(c.a.5, dimnames(a.5)),
282s +   c(1L, 2L, 11L, 12L, 21L, 22L)
282s + )
282s [1] TRUE
282s > all.equal(
282s +   diffobj:::detect_array_guides(c.a.6, dimnames(a.6)),
282s +   c(1L, 2L)
282s + )
282s [1] TRUE
282s > # - detect_s4_guides -----------------------------------------------------------
282s > 
282s > setClass("gtest2", slots=c(hello="integer", `good bye`="list"))
282s > setClass("gtest1",
282s +   slots=c(
282s +     sub.class="gtest2", blah="character", gah="list", sub.class.2="gtest2"
282s + ) )
282s > obj <- new(
282s +   "gtest1",
282s +   sub.class=new(
282s +     "gtest2", hello=1:3, `good bye`=list("a", list(l1=5, l2="wow"))
282s +   ),
282s +   blah=letters, gah=list(one=1:10, two=LETTERS),
282s +   sub.class.2=new(
282s +     "gtest2", hello=3:1, `good bye`=list("B", list(l1=5, l2="wow"))
282s +   )
282s + )
282s > # note at this point the nested stuff doesn't work, so we're just shooting for
282s > # the simple match
282s > 
282s > c.1 <- capture.output(obj)
282s > identical(
282s +   diffobj:::detect_s4_guides(c.1, obj),
282s +   c(1L, 2L, 21L, 25L, 34L)
282s + )
282s [1] TRUE
282s > # small diff as that has a non-default show method
282s > 
282s > diff <- diffChr("a", "b", format='raw')
283s > diff.out <- capture.output(show(diff))
283s > all.equal(
283s +   diffobj:::detect_s4_guides(diff.out, diff),
283s +   integer()
283s + )
283s [1] TRUE
283s > # - custom guide fun -----------------------------------------------------------
283s > 
283s > a <- b <- matrix(1:100)
283s > b[50] <- -99L
283s > 
283s > fun1 <- function(x, y) c(1L, 14L, 53L)
283s > 
283s > all.equal(as.character(diffPrint(a, b, guides=fun1)), rdsf(100))
283s [1] TRUE
283s > if(getRversion() >= "3.2.2") {
283s +   capture.output( # warn: "If you did not specify a `guides`"
283s +     trim.err <-
283s +       as.character(diffPrint(a, b, guides=function(x, y) stop("boom"))),
283s +     type="message"
283s +   )
283s +   all.equal(trim.err, rdsf(200))
283s + }
283s [1] TRUE
283s Warning message:
283s In apply_guides(current, cur.capt, guide_fun) :
283s   `guides*` method produced an error when attempting to compute guide lines ; If you did not specify a `guides` function or define custom `guides*` methods contact maintainer (see `?guides`).  Proceeding without guides.
283s > # "must produce an integer vector"
283s > try(diffobj:::apply_guides(1:26, LETTERS, function(x, y) 35L))
283s Error in diffobj:::apply_guides(1:26, LETTERS, function(x, y) 35L) : 
283s   `guides*` method must produce an integer vector containing unique index values for the `obj.as.chr` vector; If you did not specify a `guides` function or define custom `guides*` methods contact maintainer (see `?guides`).  Proceeding without guides.
283s > 
283s > # - errors ---------------------------------------------------------------------
283s > 
283s > try(guidesStr(1:26, rep(NA_character_, 26)))# "Cannot compute guides"
283s Error in guidesStr(1:26, rep(NA_character_, 26)) : 
283s   Cannot compute guides if `obj.as.chr` contains NAs
283s > try(guidesPrint(1:26, rep(NA_character_, 26)))# "Cannot compute guides"
283s Error in guidesPrint(1:26, rep(NA_character_, 26)) : 
283s   Cannot compute guides if `obj.as.chr` contains NAs
283s > 
283s > # - corner cases ---------------------------------------------------------------
283s > 
283s > all.equal(
283s +   diffobj:::split_by_guides(letters, integer()),
283s +   list(structure(letters, idx=seq_along(letters)))
283s + )
283s [1] TRUE
283s > try(guidesStr(1:26, rep(NA_character_, 26))) # "Cannot compute guides"
283s Error in guidesStr(1:26, rep(NA_character_, 26)) : 
283s   Cannot compute guides if `obj.as.chr` contains NAs
283s > try(guidesPrint(1:26, rep(NA_character_, 26))) # "Cannot compute guides"
283s Error in guidesPrint(1:26, rep(NA_character_, 26)) : 
283s   Cannot compute guides if `obj.as.chr` contains NAs
283s > 
283s > # - issue 117 - 2d guide failure -----------------------------------------------
283s > 
283s > # Thanks to Sebastian Meyer (@bastician) for MRE
283s > a <- b <- data.frame(ID = 0, value = 1)
283s > b$value <- 2
283s > a <- a[c(rep(1, 86), 2)]
283s > b <- b[c(rep(1, 86), 2)]
283s > diffPrint(a, b, mode = "unified", format='raw', context=0)
283s < a            
283s > b            
283s @@ 16 / 16 @@  
283s ~   value      
283s < 1     1      
283s > 1     2      
283s > 
283s PASS
283s Begin testing test-html.R
283s 
283s R version 4.4.3 (2025-02-28) -- "Trophy Case"
283s Copyright (C) 2025 The R Foundation for Statistical Computing
283s Platform: aarch64-unknown-linux-gnu
283s 
283s R is free software and comes with ABSOLUTELY NO WARRANTY.
283s You are welcome to redistribute it under certain conditions.
283s Type 'license()' or 'licence()' for distribution details.
283s 
283s R is a collaborative project with many contributors.
283s Type 'contributors()' for more information and
283s 'citation()' on how to cite R or R packages in publications.
283s 
283s Type 'demo()' for some demos, 'help()' for on-line help, or
283s 'help.start()' for an HTML browser interface to help.
283s Type 'q()' to quit R.
283s 
283s > NAME <- "html"
283s > source(file.path('_helper', 'init.R'))
283s > 
283s > # Verify that internal css works
283s > 
283s > # - HTML Output Modes ----------------------------------------------------------
283s > 
283s > all.equal(
283s +   as.character(
283s +     diffPrint(
283s +       letters[1:3], LETTERS[1:3],
283s +       style=StyleHtmlLightYb(html.output="diff.only")
283s +   ) ),
283s +   rdsf(100)
283s + )
283s [1] TRUE
283s > all.equal(
283s +   as.character(
283s +     diffPrint(
283s +       letters[1:6], LETTERS[1:6],
283s +       style=StyleHtmlLightYb(html.output="diff.w.style")
283s +   ) ),
283s +   rdsf(200)
283s + )
283s [1] TRUE
283s > all.equal(
283s +   as.character(
283s +     diffPrint(
283s +       letters[1:6], LETTERS[1:6],
283s +       style=StyleHtmlLightYb(html.output="page")
283s +   ) ),
283s +   rdsf(300)
283s + )
283s [1] TRUE
283s > all.equal(
283s +   as.character(
283s +     diffPrint(
283s +       letters[1:6], LETTERS[1:6], mode="unified",
283s +       style=StyleHtmlLightYb(html.output="page")
283s +   ) ),
283s +   rdsf(350)
283s + )
283s [1] TRUE
283s > # - Sub CSS --------------------------------------------------------------------
283s > 
283s > # Mess up the CSS to test that we can change CSS file
283s > 
283s > local({
283s +   f <- tempfile()
283s +   on.exit(unlink(f))
283s +   cat("div.row {background-color: red;}\n", file=f)
283s +   all.equal(
283s +     as.character(
283s +       diffPrint(
283s +         letters, LETTERS,
283s +         style=StyleHtmlLightYb(css=f, html.output="diff.w.style")
283s +       )
283s +     ),
283s +     rdsf(400)
283s +   )
283s + })
283s [1] TRUE
283s > # - Tag funs -------------------------------------------------------------------
283s > 
283s > div_a <- div_f("A", c(color="red"))
283s > all.equal(
283s +   div_a(c("a", "b")),
283s +   c(
283s +     "<div class='A' style='color: red;'>a</div>",
283s +     "<div class='A' style='color: red;'>b</div>"
283s +   )
283s + )
283s [1] TRUE
283s > span_a <- span_f()
283s > all.equal(span_a(c("a", "b")), c("<span>a</span>", "<span>b</span>"))
283s [1] TRUE
283s > 
283s > try(div_a(TRUE)) # "must be character"
283s Error in div_a(TRUE) : Argument `x` must be character.
283s > all.equal(div_a(character()),character())
283s [1] TRUE
283s > 
283s > # - nchar ----------------------------------------------------------------------
283s > 
283s > all.equal(nchar_html("<a href='blahblah'>25</a>"), 2)
283s [1] TRUE
283s > all.equal(nchar_html("<a href='blahblah'>25&nbsp;</a>"), 3)
283s [1] TRUE
283s > 
283s > # - cont_f ---------------------------------------------------------------------
283s > 
283s > try(cont_f("hello")(1:3)) # "must be character"
283s Error in cont_f("hello")(1:3) : Argument `x` must be character.
283s > 
283s PASS
283s Begin testing test-limit.R
283s 
283s R version 4.4.3 (2025-02-28) -- "Trophy Case"
283s Copyright (C) 2025 The R Foundation for Statistical Computing
283s Platform: aarch64-unknown-linux-gnu
283s 
283s R is free software and comes with ABSOLUTELY NO WARRANTY.
283s You are welcome to redistribute it under certain conditions.
283s Type 'license()' or 'licence()' for distribution details.
283s 
283s R is a collaborative project with many contributors.
283s Type 'contributors()' for more information and
283s 'citation()' on how to cite R or R packages in publications.
283s 
283s Type 'demo()' for some demos, 'help()' for on-line help, or
283s 'help.start()' for an HTML browser interface to help.
283s Type 'q()' to quit R.
283s 
284s > NAME <- "limit"
284s > source(file.path('_helper', 'init.R'))
284s > 
284s > # - Simple limit ---------------------------------------------------------------
284s > 
284s > A <- B <- letters[1:5]
284s > B[2] <- "B"
284s > B[6] <- "F"
284s > # diffChr(A, B)
284s > all.equal(as.character(diffChr(A, B, line.limit=2)), rdsf(100))
284s [1] TRUE
284s > all.equal(as.character(diffChr(A, B, line.limit=3)), rdsf(200))
284s [1] TRUE
284s > 
284s > # - More Extensive Limits ------------------------------------------------------
284s > 
284s > Puromycin2 <- Puromycin
284s > set.seed(1)
284s > Puromycin2$conc[c(8, 15:19, 22)] <- round(runif(7), 2)
284s > Puromycin2$state[17] <- "treated"
284s > 
284s > all.equal(
284s +   as.character(
284s +     diffPrint(Puromycin, Puromycin2, line.limit=15, mode="sidebyside")
284s +   ),
284s +   rdsf(300)
284s + )
284s [1] TRUE
284s > 
284s > # # Not working right
284s > # diffPrint(Puromycin, Puromycin2, line.limit=15, mode="context")
284s > all.equal(
284s +   as.character(
284s +     diffPrint(Puromycin, Puromycin2, line.limit=15, mode="unified")
284s +   ),
284s +   rdsf(500)
284s + )
284s [1] TRUE
284s > 
284s > all.equal(
284s +   as.character(
284s +     diffPrint(Puromycin, Puromycin2, line.limit=5, mode="sidebyside")
284s +   ),
284s +   rdsf(600)
284s + )
284s [1] TRUE
284s > all.equal(
284s +   as.character(
284s +     diffPrint(Puromycin, Puromycin2, line.limit=5, mode="context")
284s +   ),
284s +   rdsf(700)
284s + )
284s [1] TRUE
284s > all.equal(
284s +   as.character(
284s +     diffPrint(Puromycin, Puromycin2, line.limit=5, mode="unified")
284s +   ),
284s +   rdsf(800)
284s + )
284s [1] TRUE
284s > 
284s > Puromycin3 <- Puromycin2
284s > names(Puromycin3)[3L] <- "blargh"
284s > all.equal(
284s +   as.character(
284s +     diffPrint(Puromycin, Puromycin3, line.limit=7, mode="sidebyside")
284s +   ),
284s +   rdsf(900)
284s + )
284s [1] TRUE
284s > all.equal(
284s +   as.character(
284s +     diffPrint(Puromycin, Puromycin3, line.limit=6, mode="context")
284s +   ),
284s +   rdsf(1000)
284s + )
284s [1] TRUE
284s > # - Dual limit values ----------------------------------------------------------
284s > 
284s > A <- letters[1:10]
284s > B <- LETTERS[1:10]
284s > all.equal(
284s +   as.character(diffChr(A, B, line.limit=c(10, 3))), rdsf(1100)
284s + )
284s [1] TRUE
284s > all.equal(
284s +   as.character(diffChr(A, B, line.limit=c(13, 3))), rdsf(1200)
284s + )
284s [1] TRUE
284s > try(diffChr(A, B, line.limit=c(3, 13))) # "larger than or"
284s Error in diffChr(target = A, current = B, line.limit = c(3, 13)) : 
284s   Argument `line.limit` must be an integer vector of length 1 or 2 and if length 2, with the first value larger than or equal to the second, or "auto" or the result of calling `auto_line_limit`
284s > 
284s > # - Cause errors ---------------------------------------------------------------
284s > 
284s > try(diffChr(letters, LETTERS, line.limit=1:3)) # "vector of length"
284s Error in diffChr(target = letters, current = LETTERS, line.limit = 1:3) : 
284s   Argument `line.limit` must be an integer vector of length 1 or 2 and if length 2, with the first value larger than or equal to the second, or "auto" or the result of calling `auto_line_limit`
284s > 
284s > # - Vanishing header -----------------------------------------------------------
284s > 
284s > # issue 64
284s > all.equal(
284s +   as.character(
284s +     diffChr(
284s +       letters, letters[-13], context=auto_context(0, 10), line.limit=1L,
284s +       pager="off"
284s +   ) ),
284s +   rdsf(1300)
284s + )
284s [1] TRUE
284s > 
284s > 
284s PASS
284s Begin testing test-methods.R
284s 
284s R version 4.4.3 (2025-02-28) -- "Trophy Case"
284s Copyright (C) 2025 The R Foundation for Statistical Computing
284s Platform: aarch64-unknown-linux-gnu
284s 
284s R is free software and comes with ABSOLUTELY NO WARRANTY.
284s You are welcome to redistribute it under certain conditions.
284s Type 'license()' or 'licence()' for distribution details.
284s 
284s R is a collaborative project with many contributors.
284s Type 'contributors()' for more information and
284s 'citation()' on how to cite R or R packages in publications.
284s 
284s Type 'demo()' for some demos, 'help()' for on-line help, or
284s 'help.start()' for an HTML browser interface to help.
284s Type 'q()' to quit R.
284s 
285s > NAME <- "methods"
285s > source(file.path('_helper', 'init.R'))
285s > 
285s > # try implementing methods that change default behavior outside of package
285s > 
285s > # - Force unified --------------------------------------------------------------
285s > 
285s > par.env <- new.env()
285s > local(
285s +   envir=par.env, {
285s +   suppressWarnings(
285s +     setClass(
285s +       "testdiffobj", slots=c(a="integer"), where=par.env
285s +   ) )
285s +   # First check that we do actually output in side by side mode
285s + 
285s +   print(
285s +     all.equal(
285s +       as.character(diffObj(new("testdiffobj", a=1L), new("testdiffobj", a=2L))),
285s +       rdsf(100)
285s +   ) )
285s +   # Now verify that with our new method, we get unified
285s + 
285s +   setMethod("diffObj", c("testdiffobj", "testdiffobj"),
285s +     function(target, current, ...) {
285s +       dots <- match.call(expand.dots=FALSE)[["..."]]
285s +       if("mode" %in% names(dots))
285s +         callNextMethod()
285s +       else
285s +         callNextMethod(target=target, current=current, ..., mode="unified")
285s +     },
285s +     where=par.env
285s +   )
285s +   on.exit(
285s +     removeMethod("diffObj", c("testdiffobj", "testdiffobj"), where=par.env)
285s +   )
285s +   print(
285s +     all.equal(
285s +       as.character(diffObj(new("testdiffobj", a=1L), new("testdiffobj", a=2L))),
285s +       rdsf(200)
285s +     ) )
285s +   # Make sure we can still get side by side?
285s +   print(
285s +     all.equal(
285s +       as.character(
285s +         diffObj(
285s +           new("testdiffobj", a=1L), new("testdiffobj", a=2L), mode="sidebyside"
285s +       ) ),
285s +       rdsf(100)
285s +   ) )
285s +   try( #"Argument `mode` must be"
285s +     diffObj(new("testdiffobj", a=1L), new("testdiffobj", a=2L), mode="hello")
285s +   )
285s + })
285s [1] TRUE
285s [1] TRUE
285s [1] TRUE
285s Error in diffObj(target = new("testdiffobj", a = 1L), current = new("testdiffobj",  : 
285s   Error in calling `diffStr`: Argument `mode` must be character(1L) and in `c("auto", "unified", "context", "sidebyside")`.
285s > 
285s PASS
285s Begin testing test-misc.R
285s 
285s R version 4.4.3 (2025-02-28) -- "Trophy Case"
285s Copyright (C) 2025 The R Foundation for Statistical Computing
285s Platform: aarch64-unknown-linux-gnu
285s 
285s R is free software and comes with ABSOLUTELY NO WARRANTY.
285s You are welcome to redistribute it under certain conditions.
285s Type 'license()' or 'licence()' for distribution details.
285s 
285s R is a collaborative project with many contributors.
285s Type 'contributors()' for more information and
285s 'citation()' on how to cite R or R packages in publications.
285s 
285s Type 'demo()' for some demos, 'help()' for on-line help, or
285s 'help.start()' for an HTML browser interface to help.
285s Type 'q()' to quit R.
285s 
285s > NAME <- "misc"
285s > source(file.path('_helper', 'init.R'))
285s > 
285s > # - trim_str -------------------------------------------------------------------
285s > 
285s > a <- structure("hello", class="A", xx="B")
285s > b <- structure(1:10, yy=a)
285s > long.string <- "I'm a string long enough to force wrapping under most cases so that I may be useful for tests andiamareallylongwordtoseehowwrappingbreakslongwordsthatexceed"
285s > obj <- list(
285s +   a=a, b=b, c=1:50,
285s +   d=long.string,
285s +   e=list(1, structure(2, zz=list(a=1, b=list("a", ls=long.string))), e=letters)
285s + )
285s > # conditional because of issue113
285s > str.txt <- capture.output(str(obj))
285s > str.txt.w <- capture.output(str(obj, width=30L, strict.width="wrap"))
286s > 
286s > if(
286s +   getRversion() >= '3.5.0' && as.numeric(R.Version()[['svn rev']]) >= 73780
286s + ) {
286s +   c(
286s +     all.equal(
286s +       diffobj:::str_levels(str.txt, wrap=FALSE),
286s +       c(0L, 1L, 2L, 1L, 2L, 3L, 1L, 1L, 1L, 2L, 2L, 3L, 4L, 4L, 5L, 5L, 2L)
286s +     ),
286s +     all.equal(
286s +       diffobj:::str_levels(str.txt.w, wrap=TRUE),
286s +       c(0L, 1L, 2L, 1L, 1L, 2L, 2L, 3L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
286s +         1L, 1L, 2L, 2L, 3L, 3L, 4L, 4L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L,
286s +         2L, 2L
286s +       )
286s +   ) )
286s + } else {
286s +   c(
286s +     all.equal(
286s +       diffobj:::str_levels(str.txt, wrap=FALSE),
286s +       c(0L, 1L, 3L, 1L, 2L, 4L, 1L, 1L, 1L, 2L, 2L, 3L, 4L, 4L, 5L,  5L, 2L)
286s +     ),
286s +     all.equal(
286s +       diffobj:::str_levels(str.txt.w, wrap=TRUE),
286s +       c(0L, 1L, 1L, 3L, 1L, 1L, 2L, 2L, 4L, 4L, 1L, 1L, 1L, 1L, 1L,  1L, 1L, 1L, 1L, 2L, 2L, 3L, 3L, 4L, 4L, 5L, 5L, 5L, 5L, 5L, 5L,  5L, 5L, 2L, 2L)
286s +   ) )
286s + }
286s [1] TRUE TRUE
286s > # cat(
286s > #   paste(
286s > #     format(substr(str.txt.w, 1, 20)), diffobj:::str_levels(str.txt.w, TRUE),
286s > #     sep=": "
286s > #   ),
286s > #   sep="\n"
286s > # )
286s > 
286s > # - rle_sub --------------------------------------------------------------------
286s > 
286s > x <- c(1, 1, 1, 2, 2, 1, 1, 3, 3, 4, 4, 4, 5, 2, 2)
286s > r <- rle(x)
286s > all.equal(diffobj:::rle_sub(r, r$values == 1L), list(1:3, 6:7))
286s [1] TRUE
286s > all.equal(diffobj:::rle_sub(r, r$values == 2L), list(4:5, 14:15))
286s [1] TRUE
286s > isTRUE(all(x[unlist(diffobj:::rle_sub(r, r$values == 1L))] == 1))
286s [1] TRUE
286s > isTRUE(all(x[unlist(diffobj:::rle_sub(r, r$values == 2L))] == 2))
286s [1] TRUE
286s > isTRUE(all(x[unlist(diffobj:::rle_sub(r, r$values == 3L))] == 3))
286s [1] TRUE
286s > 
286s > # - call funs ------------------------------------------------------------------
286s > 
286s > # Failure case; assumes no S4 dispatch in testthat
286s > calls <- list(quote(a()), quote(b()), quote(notafunctionblah()))
286s > all.equal(diffobj:::which_top(calls), length(calls))
286s [1] TRUE
286s > diffobj:::extract_call(calls, new.env()) # warn:  "Unable to find")
286s $call
286s NULL
286s 
286s $tar
286s NULL
286s 
286s $cur
286s NULL
286s 
286s Warning message:
286s In get_fun(found.call[[1L]], env = par.env) :
286s   Unable to find function `notafunctionblah` to match call with.
286s > 
286s > # missing param works
286s > 
286s > calls2 <- pairlist(
286s +   quote(diffChr("a")), quote(diffChr("a")), quote(.local(target, current, ...))
286s + )
286s > all.equal(
286s +   diffobj:::extract_call(calls2, new.env()),
286s +   list(call = quote(diffChr(target = "a", NULL)), tar = "a", cur = NULL)
286s + )
286s [1] TRUE
286s > # fallback parent frame; can't think of a good way to actually cause this to
286s > # happen
286s > 
286s > # all.equal(diffobj:::par_frame(), .GlobalEnv)
286s > 
286s > # - lines ----------------------------------------------------------------------
286s > 
286s > old.val <- Sys.getenv("LINES", unset=NA)
286s > Sys.setenv(LINES="25")
286s > all.equal(console_lines(), 25L)
286s [1] TRUE
286s > Sys.setenv(LINES="-25")
286s > all.equal(console_lines(), 48L)
286s [1] TRUE
286s > Sys.unsetenv("LINES")
286s > all.equal(console_lines(), 48L)
286s [1] TRUE
286s > 
286s > # - get_funs -------------------------------------------------------------------
286s > 
286s > identical(
286s +   diffobj:::get_fun(quote(diffobj::diffPrint), .BaseNamespaceEnv),
286s +   diffobj::diffPrint
286s + )
286s [1] TRUE
286s > identical(
286s +   diffobj:::get_fun(quote(diffobj:::diffPrint), .BaseNamespaceEnv),
286s +   diffobj::diffPrint
286s + )
286s [1] TRUE
286s > identical(
286s +   diffobj:::get_fun(quote(diffPrint), getNamespace("diffobj")),
286s +   diffobj::diffPrint
286s + )
286s [1] TRUE
286s > gf <- diffobj:::get_fun(quote(notAFunction), getNamespace("diffobj")) # warn
286s Warning message:
286s In diffobj:::get_fun(quote(notAFunction), getNamespace("diffobj")) :
286s   Unable to find function `notAFunction` to match call with.
286s > 
286s > identical(gf, NULL)
286s [1] TRUE
286s > 
286s > # - trimws2 --------------------------------------------------------------------
286s > 
286s > all.equal(diffobj:::trimws2("hello world"),  "hello world")
286s [1] TRUE
286s > all.equal(diffobj:::trimws2("  hello world"),  "hello world")
286s [1] TRUE
286s > all.equal(diffobj:::trimws2("  hello world  "),  "hello world")
286s [1] TRUE
286s > all.equal(diffobj:::trimws2("  hello world  ", 'left'), "hello world  ")
286s [1] TRUE
286s > all.equal(diffobj:::trimws2("  hello world  ", 'right'), "  hello world")
286s [1] TRUE
286s > 
286s > try(diffobj:::trimws2("  hello world  ", 'banana')) # "is wrong"
286s Error in diffobj:::trimws2("  hello world  ", "banana") : 
286s   Argument which is wrong
286s > 
286s > # - string ---------------------------------------------------------------------
286s > 
286s > try(diffobj:::substr2("hello world", 1, 1:2)) # "same length"
286s Error in diffobj:::substr2("hello world", 1, 1:2) : 
286s   `start` and `stop` must be length 1 or the same length as `x`.
286s > 
286s > # - Gutters --------------------------------------------------------------------
286s > 
286s > etc <- new("Settings")
286s > etc@style <- StyleRaw()
286s > etc@style@funs@gutter <- function(x) stop("bad gutters")
286s > try(diffobj:::gutter_dat(etc)) # "Failed attempting to apply gutter."
286s Error in funs@gutter(paste0(gutt.dat.format, funs@gutter.pad(text@gutter.pad))) : 
286s   bad gutters
286s Error in diffobj:::gutter_dat(etc) : 
286s   Failed attempting to apply gutter formatting functions; if you did not customize them, contact maintainer.  See `?StyleFuns`.
286s > 
286s > # - Finalizer error handling ---------------------------------------------------
286s > 
286s > try(finalizeHtml(letters, NULL)) # "must be character"
286s Error in .local(x, ...) : Argument `x.chr` must be character
286s > try(finalizeHtml(letters, letters, letters)) # "must be character\\(1L"
286s Error in .local(x, ...) : Argument `js` must be character(1L) and not NA.
286s > 
286s > # - c.factor -------------------------------------------------------------------
286s > 
286s > all.equal(diffobj:::c.factor(), factor(character()))
286s [1] TRUE
286s > 
286s > # - strip_hz -------------------------------------------------------------------
286s > 
286s > # Can't trigger this directly because wrapper doesn't let this case through
286s > diffobj:::strip_hz_c_int(character(), 8L, TRUE)
286s character(0)
286s > 
286s > 
286s > 
286s PASS
286s Begin testing test-pager.R
286s 
286s R version 4.4.3 (2025-02-28) -- "Trophy Case"
286s Copyright (C) 2025 The R Foundation for Statistical Computing
286s Platform: aarch64-unknown-linux-gnu
286s 
286s R is free software and comes with ABSOLUTELY NO WARRANTY.
286s You are welcome to redistribute it under certain conditions.
286s Type 'license()' or 'licence()' for distribution details.
286s 
286s R is a collaborative project with many contributors.
286s Type 'contributors()' for more information and
286s 'citation()' on how to cite R or R packages in publications.
286s 
286s Type 'demo()' for some demos, 'help()' for on-line help, or
286s 'help.start()' for an HTML browser interface to help.
286s Type 'q()' to quit R.
286s 
286s > NAME <- "pager"
286s > source(file.path('_helper', 'init.R'))
286s > source(file.path('_helper', 'tools.R'))
286s > 
286s > # void pager, doesn't do anything, just to test side effect of writing to file
286s > 
286s > void <- function(x) NULL
286s > 
286s > # - Specifying pager -----------------------------------------------------------
286s > 
286s > style <- gdo("diffobj.style")
286s > if(is.null(style)) style <- StyleAnsi8NeutralYb()
286s > style@pager@file.ext <- "xyz"  # make pager identifiable
286s > all.equal(
286s +   diffChr(
286s +     letters, LETTERS, style=style, pager="auto", interactive=TRUE
286s +   )@etc@style@pager@file.ext,
286s +   "xyz"
286s + )
286s [1] TRUE
286s > all.equal(
286s +   diffChr(
286s +     letters, LETTERS, style=style, pager="off", interactive=TRUE
286s +   )@etc@style@pager,
286s +   PagerOff()
286s + )
286s [1] TRUE
286s > identical(
286s +   diffChr(
286s +     letters, LETTERS, style=style, pager="auto", interactive=FALSE
286s +   )@etc@style@pager,
286s +   PagerOff()
286s + )
286s [1] TRUE
286s > 
286s > # - System Pagers --------------------------------------------------------------
286s > 
286s > less.orig <- Sys.getenv("LESS")
286s > pager_mock <- function(...) {
286s +   warning(Sys.getenv("LESS"))
286s +   42
286s + }
286s > is(PagerSystem(), "PagerSystem")
286s [1] TRUE
286s > is(
286s +   pg.less <- PagerSystemLess(pager=pager_mock, flags="VWF"),
286s +   "PagerSystemLess"
286s + )
286s [1] TRUE
286s > res <- pg.less@pager() # warning: "VWF$"
286s Warning message:
286s In pager.old(x) : -VWF
286s > all.equal(res, 42)
286s [1] TRUE
286s > all.equal(less.orig, Sys.getenv("LESS"))
286s [1] TRUE
286s > all.equal(PagerSystemLess(pager=pager_mock)@flags, "R")
286s [1] TRUE
286s > 
286s > try(PagerSystemLess(pager=pager_mock, flags=letters))
286s Error in initialize(value, ...) : 
286s   Argument `flags` must be character(1L) and not NA
286s > 
286s > # - use_pager ------------------------------------------------------------------
286s > 
286s > local({
286s +   suppressMessages(mock(diffobj:::console_lines, 10L))
286s +   on.exit(suppressMessages(untrace(diffobj:::console_lines)))
286s +   c(
286s +     isTRUE(diffobj:::use_pager(PagerSystem(threshold=0L), 1L)),
286s +     identical(diffobj:::use_pager(PagerSystem(threshold=50L), 25L), FALSE),
286s +     isTRUE(diffobj:::use_pager(PagerSystem(threshold=-1L), 25L))
286s +   )
286s + })
286s [1] TRUE TRUE TRUE
286s > 
286s > # - Setting LESS var -----------------------------------------------------------
286s > 
286s > local({
286s +   less.orig <- Sys.getenv("LESS", unset=NA)
286s +   old.opt <- options(crayon.enabled=FALSE)  # problems with crayon and LESS
286s +   on.exit({
286s +     diffobj:::reset_less_var(less.orig) # should be tested..., but super simple
286s +     options(old.opt)
286s +   })
286s + 
286s +   # Here we change the LESS variable even though we're mocking getenv
286s + 
286s +   Sys.unsetenv("LESS")
286s +   a0 <- isTRUE(is.na(diffobj:::set_less_var("XF")))
286s +   a <- all.equal(Sys.getenv("LESS"), "-XF")
286s +   Sys.setenv(LESS="-X -F")
286s +   b <- all.equal(diffobj:::set_less_var("VP"), "-X -F")
286s +   c <- all.equal(Sys.getenv("LESS"), "-X -FVP")
286s +   diffobj:::reset_less_var("-XF")
286s +   d <- all.equal(Sys.getenv("LESS"), "-XF")
286s +   diffobj:::reset_less_var(NA_character_)
286s +   e <- all.equal(Sys.getenv("LESS"), "")
286s +   Sys.setenv(LESS="-XF")
286s +   f <- all.equal(diffobj:::set_less_var("V"), "-XF")
286s +   g <- all.equal(Sys.getenv("LESS"), "-XFV")
286s +   c(a0, a, b, c, d, e, f, g)
286s + })
286s [1] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE
286s > 
286s > # - viewer vs browser ----------------------------------------------------------
286s > 
286s > local({
286s +   viewer <- function(x) "viewer"
286s +   old.external <- options(viewer=viewer, browser=function(url) "browser")
286s +   on.exit(options(old.external))
286s +   suppressMessages(mock(diffobj::make_blocking, quote(fun)))
286s +   on.exit(suppressMessages(untrace(diffobj::make_blocking)), add=TRUE)
286s +   pager <- PagerBrowser()
286s +   a <- all.equal(pager@pager("blah"), "viewer")
286s +   options(viewer=NULL)
286s +   b <- all.equal(pager@pager("blah"), "browser")
286s +   options(viewer=function(x) stop("viewer error"))
286s +   res <- pager@pager("blah") # warning: "IDE viewer"
286s +   c <- all.equal(res, "browser")
286s +   c(a, b, c)
286s + })
286s [1] TRUE TRUE TRUE
286s Warning message:
286s In pager@pager("blah") :
286s   IDE viewer failed with error viewer error; falling back to `browseURL`
286s > 
286s > # - blocking -------------------------------------------------------------------
286s > 
286s > # Note that readline just proceeds in non-interactive mode, which is why we
286s > # need the mock here
286s > 
286s > local({
286s +   suppressMessages(mock(diffobj:::interactive, FALSE))
286s +   on.exit(suppressMessages(untrace(diffobj:::interactive)))
286s +   suppressMessages(mock(diffobj:::readline, quote(warning("readline"))))
286s +   on.exit(suppressMessages(untrace(diffobj:::readline)), add=TRUE)
286s +   try(make_blocking("hello")) # "must be a function"
286s +   try(make_blocking(identity, letters)) # "must be character\\(1L")
286s +   try(make_blocking(identity, "a", "a")) # "must be TRUE"
286s + 
286s +   res <- make_blocking(sum)(1:10) # warn: "readline"
286s +   a <- all.equal(sum(1:10), res)
286s +   b <- isTRUE(
286s +     withVisible(
286s +       suppressWarnings(make_blocking(sum, invisible=FALSE)(1:10))
286s +     )[['visible']]
286s +   )
286s +   c(a, b)
286s + })
286s Error in make_blocking("hello") : Argument `fun` must be a function
286s Error in make_blocking(identity, letters) : 
286s   Argument `msg` must be character(1L) and not NA
286s Error in make_blocking(identity, "a", "a") : 
286s   Argument `invisible.res` must be TRUE or FALSE
286s [1] TRUE TRUE
286s Warning message:
286s In readline(msg) : readline
286s > local({
286s +   suppressMessages(mock(diffobj:::interactive, TRUE))
286s +   on.exit(suppressMessages(untrace(diffobj:::interactive)))
286s +   suppressMessages(mock(diffobj:::readline, quote(warning("readline"))))
286s +   on.exit(suppressMessages(untrace(diffobj:::readline)), add=TRUE)
286s +   show( # warn "readline"
286s +     diffChr(
286s +       "a", "b", format='raw',
286s +       pager=list(pager=void, make.blocking=TRUE, threshold=0)
286s +     )
286s +   )
286s +   show( # warn "readline"
286s +     diffChr(
286s +       "a", "b", format='html',
286s +       pager=list(pager=void, make.blocking=NA, threshold=0)
286s +   ) )
286s +   show(diffChr("a", "b", format='html', pager=list(pager=void)))
286s + })
286s Warning messages:
286s 1: In readline(msg) : readline
286s 2: In readline(msg) : readline
286s 3: In readline(msg) : readline
286s > # There should be no warnings in this lot
286s > 
286s > local({
286s +   suppressMessages(mock(diffobj:::interactive, TRUE))
286s +   on.exit(suppressMessages(untrace(diffobj:::interactive)))
286s +   suppressMessages(mock(diffobj:::readline, quote(warning("readline"))))
286s +   on.exit(suppressMessages(untrace(diffobj:::readline)), add=TRUE)
286s +   f <- tempfile()
286s +   on.exit(unlink(f), add=TRUE)
286s +   show(  # no warning
286s +     diffChr(
286s +       "a", "b", format='html',
286s +       pager=list(pager=void, make.blocking=NA, file.path=f)
286s +   ) )
286s +   show(  # no warning
286s +     diffChr(
286s +       "a", "b", format='html',
286s +       pager=list(pager=void, make.blocking=FALSE, file.path=f)
286s +   ) )
286s +   show(  # no warning
286s +     diffChr("a", "b", format='html', pager=list(pager=void, file.path=f))
286s +   )
286s + })
287s > 
287s > # - html page output -----------------------------------------------------------
287s > 
287s > pager <- PagerBrowser(
287s +   pager=function(x) cat(readLines(x), sep="\n"), make.blocking=FALSE
287s + )
287s > all.equal(
287s +   capture.output(show(diffChr("A", "B", pager=pager, style=StyleRaw()))),
287s +   c("< \"A\"       > \"B\"     ", "@@ 1 @@     @@ 1 @@   ", "< A         > B       ")
287s + )
287s [1] TRUE
287s > pager.warn <- PagerBrowser(
287s +   pager=function(x) cat(readLines(x), sep="\n"), make.blocking=FALSE
287s + )
287s > try( # "Unable to instantiate `Style` object: Argument `js` .* is not a file"
287s +   diffChr(
287s +     "A", "B", pager=pager.warn, format="html", style=list(js="notafile")
287s + ) )
287s Error in diffChr(target = "A", current = "B", pager = pager.warn, format = "html",  : 
287s   Unable to instantiate `Style` object: Argument `js` ("notafile") is not a file
287s > try( # "Unable to instantiate `Style` object: Argument `css` .* is not a file"
287s +   diffChr(
287s +     "A", "B", pager=pager.warn, format="html", style=list(css="notafile")
287s +   )
287s + )
287s Error in diffChr(target = "A", current = "B", pager = pager.warn, format = "html",  : 
287s   Unable to instantiate `Style` object: Argument `css` ("notafile") is not a file
287s > # Create objects that bypass the validation
287s > 
287s > style.obj.1 <- style.obj.2 <- StyleHtmlLightYb()
287s > style.obj.1@css <- "notafile"
287s > style.obj.2@js <- "notafile"
287s > 
287s > invisible(
287s +   capture.output( # warn: "Unable to read provided css file"
287s +     show(diffChr("A", "B", pager=pager.warn, style=style.obj.1))
287s + ) )
287s Warning messages:
287s 1: In file(con, "r") :
287s   cannot open file 'notafile': No such file or directory
287s 2: In .local(x, ...) :
287s   Unable to read provided css file "notafile" (error: cannot open the connection).
287s > invisible(
287s +   capture.output( # "Unable to read provided js file"
287s +     show(diffChr("A", "B", pager=pager.warn, style=style.obj.2))
287s + ) )
287s Warning messages:
287s 1: In file(con, "r") :
287s   cannot open file 'notafile': No such file or directory
287s 2: In .local(x, ...) :
287s   Unable to read provided js file "notafile" (error: cannot open the connection).
287s > # - pager_is_less --------------------------------------------------------------
287s > 
287s > is.less <- pager_is_less()
287s > isTRUE(diffobj:::is.TF(is.less))
287s [1] TRUE
287s > 
287s > less <- tryCatch(
287s +   system2("which", "less", stdout=TRUE, stderr=TRUE),
287s +   error=function(e) NULL, warning=function(e) NULL
287s + )
287s > sys.cat <- tryCatch(
287s +   system2("which", "cat", stdout=TRUE, stderr=TRUE),
287s +   error=function(e) NULL, warning=function(e) NULL
287s + )
287s > if(diffobj:::is.chr.1L(less) && file_test("-x", less)) {
287s +   local({
287s +     old.opt <- options(pager=less)
287s +     on.exit(options(old.opt))
287s + 
287s +     # has to be stopifnot as we can't return TRUE for systems that don't
287s +     # meet these requirements
287s +     stopifnot(
287s +       identical(diffobj:::pager_opt_default(), FALSE),
287s +       isTRUE(pager_is_less())
287s +     )
287s +   })
287s + }
287s > if(diffobj:::is.chr.1L(sys.cat) && file_test("-x", sys.cat)) {
287s +   local({
287s +     old.opt <- options(pager=sys.cat)
287s +     on.exit(options(old.opt))
287s + 
287s +     # has to be stopifnot as we can't return TRUE for systems that don't
287s +     # meet these requirements
287s +     stopifnot(
287s +       identical(diffobj:::pager_opt_default(), FALSE),
287s +       identical(pager_is_less(), FALSE)
287s +     )
287s +   })
287s + }
287s > ## force some checks
287s > 
287s > local({
287s +   old.opt <- options(pager=NULL)
287s +   on.exit(options(old.opt))
287s +   identical(pager_is_less(), FALSE)
287s + })
287s [1] TRUE
287s > identical(diffobj:::file_is_less(tempfile()), FALSE)
287s [1] TRUE
287s > 
287s > # - file.path ------------------------------------------------------------------
287s > 
287s > f <- tempfile()
287s > show(
287s +   diffChr(
287s +     "A", "B", format='raw',
287s +     pager=list(pager=void, file.path=f, threshold=0L)
287s + ) )
287s > all.equal(
287s +   readLines(f),
287s +   c("< \"A\"       > \"B\"     ", "@@ 1 @@     @@ 1 @@   ",
287s +     "< A         > B       ")
287s + )
287s [1] TRUE
287s > show(  # No error on this one
287s +   diffChr(
287s +     "A", "B", format='raw',
287s +     pager=list(pager=void, file.path=NA, threshold=0L)
287s + ) )
287s > try(Pager(file.path=letters)) # "must be length 1"
287s Error in initialize(value, ...) : Argument `file.path` must be length 1.
287s > try(Pager(file.path=1)) # "must be character"
287s Error in initialize(value, ...) : Argument `file.path` must be character.
287s > 
287s > # - basic pager ----------------------------------------------------------------
287s > 
287s > local({
287s +   f <- tempfile()
287s +   on.exit(unlink(f))
287s +   c(
287s +     all.equal(
287s +       capture.output(
287s +         show(
287s +           diffChr(
287s +             1, 2, pager=Pager(file.path=f, threshold=0L),
287s +             format='raw'
287s +           )
287s +       ) ),
287s +       txtf(100)
287s +     ),
287s +     all.equal(txtf(100), readLines(f))
287s +   )
287s + })
287s [1] TRUE TRUE
287s > 
287s > # - format-pager interaction ---------------------------------------------------
287s > 
287s > local({
287s +   old.opt <- options(crayon.colors=7)
287s +   crayon::num_colors(TRUE)
287s +   on.exit({
287s +     options(old.opt)
287s +     crayon::num_colors(TRUE)
287s +   })
287s +   c(
287s +     is(
287s +       diffChr(1, 2, format='auto', pager="on", interactive=TRUE)@etc@style,
287s +       "StyleHtml"
287s +     ),
287s +     is(
287s +       diffChr(1, 2, format='auto', pager="on", interactive=FALSE)@etc@style,
287s +       "StyleRaw"
287s +     ),
287s +     is(
287s +       diffChr(
287s +         1, 2, format='auto', pager=PagerBrowser(), interactive=FALSE
287s +       )@etc@style,
287s +       "StyleHtml"
287s +     )
287s +   )
287s + })
287s [1] TRUE TRUE TRUE
287s > # - format-pager interaction 2 -------------------------------------------------
287s > 
287s > local({
287s +   old.rs <- Sys.getenv('RSTUDIO', unset=NA)
287s +   old.rsterm <- Sys.getenv('RSTUDIO_TERM', unset=NA)
287s +   on.exit({
287s +     if(is.na(old.rs)) {
287s +       Sys.unsetenv('RSTUDIO')
287s +     } else Sys.setenv('RSTUDIO'=old.rs)
287s + 
287s +     if(is.na(old.rsterm)) {
287s +       Sys.unsetenv('RSTUDIO_TERM')
287s +     } else Sys.setenv('RSTUDIO_TERM'=old.rsterm)
287s +   })
287s +   Sys.unsetenv('RSTUDIO')
287s +   Sys.unsetenv('RSTUDIO_TERM')
287s +   old.opt <- options(crayon.colors=8)
287s +   crayon::num_colors(TRUE)
287s +   on.exit({options(old.opt); crayon::num_colors(TRUE)}, add=TRUE)
287s + 
287s +   Sys.setenv(RSTUDIO='1')
287s + 
287s +   a <- c(
287s +     is(
287s +       diffChr(1, 2, format='auto', pager='on', interactive=TRUE)@etc@style,
287s +       "StyleHtml"
287s +     ),
287s +     is(
287s +       diffChr(1, 2, format='auto', interactive=FALSE)@etc@style,
287s +       "StyleAnsi"
287s +   ) )
287s +   Sys.setenv(RSTUDIO_TERM='HELLO')
287s +   crayon::num_colors(TRUE)
287s + 
287s +   c(
287s +     a,
287s +     is(
287s +       diffChr(1, 2, format='auto', pager='on', interactive=TRUE)@etc@style,
287s +       "StyleAnsi"
287s +   ) )
287s + })
287s [1] TRUE TRUE TRUE
287s > 
287s > # - format-pager interaction 3 -------------------------------------------------
287s > 
287s > is(
287s +   diffPrint(1:3, 3:1, format='auto', interactive=FALSE, term.colors=1)@etc@style,
287s +   "StyleRaw"
287s + )
287s [1] TRUE
287s > is(
287s +   diffPrint(1:3, 3:1, format='auto', interactive=FALSE, term.colors=8)@etc@style,
287s +   "StyleAnsi"
287s + )
287s [1] TRUE
287s > 
287s > # - Default pager writes to screen ---------------------------------------------
287s > 
287s > # issue132 thanks Bill Dunlap
287s > 
287s > local({
287s +   f <- tempfile()
287s +   on.exit(unlink(f))
287s +   writeLines("hello world", f)
287s + 
287s +   all.equal(capture.output(new("Pager")@pager(f)), "hello world")
287s + })
287s [1] TRUE
287s > 
287s > 
287s PASS
287s Begin testing test-rdiff.R
287s 
287s R version 4.4.3 (2025-02-28) -- "Trophy Case"
287s Copyright (C) 2025 The R Foundation for Statistical Computing
287s Platform: aarch64-unknown-linux-gnu
287s 
287s R is free software and comes with ABSOLUTELY NO WARRANTY.
287s You are welcome to redistribute it under certain conditions.
287s Type 'license()' or 'licence()' for distribution details.
287s 
287s R is a collaborative project with many contributors.
287s Type 'contributors()' for more information and
287s 'citation()' on how to cite R or R packages in publications.
287s 
287s Type 'demo()' for some demos, 'help()' for on-line help, or
287s 'help.start()' for an HTML browser interface to help.
287s Type 'q()' to quit R.
287s 
287s > NAME <- "rdiff"
287s > source(file.path('_helper', 'init.R'))
287s > 
287s > # - diff util detection --------------------------------------------------------
287s > 
287s > identical(has_Rdiff(function(...) warning("test warning")), FALSE)
287s [1] TRUE
287s > isTRUE(has_Rdiff(function(...) NULL))
287s [1] TRUE
287s > 
287s > # - errors ---------------------------------------------------------------------
287s > 
287s > try(Rdiff_chr(stop('hello'), 'goodbye')) # "Unable to coerce"
287s Error in try(as.character(from)) : hello
287s Error in Rdiff_chr(stop("hello"), "goodbye") : 
287s   Unable to coerce `target` to character.
287s > try(Rdiff_chr('hello', stop('goodbye'))) #  "Unable to coerce"
287s Error in try(as.character(to)) : goodbye
287s Error in Rdiff_chr("hello", stop("goodbye")) : 
287s   Unable to coerce `current` to character.
287s > try(Rdiff_obj(stop('hello'), 'goodbye')) #  "Unable to store"
287s Error in vapply(list(from, to), function(x) { : hello
287s Error in Rdiff_obj(stop("hello"), "goodbye") : 
287s   Unable to store text representation of objects
287s > 
287s > # - Rdiff_chr/obj --------------------------------------------------------------
287s > 
287s > # Only run tests on machines that are likely to have diff utility
287s > 
287s > if(identical(.Platform$OS.type, "unix") && has_Rdiff()) {
287s +   local({
287s +     A2 <- c("A", "B", "C")
287s +     B2 <- c("X", "A", "Y", "C")
287s +     A3 <- 1:3
287s +     B3 <- c(100L, 1L, 200L, 3L)
287s + 
287s +     # Rdiff_chr
287s + 
287s +     ref.res <- c("0a1", "2c3")
287s +     ref.res.1 <- c("0a1", "> X", "2c3", "< B", "---", "> Y")
287s + 
287s +     a <- identical(Rdiff_chr(A2, B2, silent=TRUE, minimal=TRUE), ref.res)
287s +     capt <- capture.output(res <- Rdiff_chr(A2, B2, silent=FALSE, minimal=TRUE))
287s +     b <- identical(res, ref.res)
287s +     c <- identical(capt, res)
287s +     capt.1 <- capture.output(
287s +       res.1 <- Rdiff_chr(A2, B2, silent=FALSE, minimal=FALSE)
287s +     )
287s +     d <- identical(capt.1, ref.res.1)
287s +     e <- identical(res.1, ref.res.1)
287s + 
287s +     # test coersion
287s +     f <- identical(Rdiff_chr(A3, B3, minimal=TRUE, silent=TRUE), ref.res)
287s + 
287s +     # Rdiff_obj
287s + 
287s +     ref.res2 <- c("1c1", "< [1] \"A\" \"B\" \"C\"", "---", "> [1] \"X\" \"A\" \"Y\" \"C\"" )
287s +     ref.res3 <- c("1c1")
287s + 
287s +     g <- identical(Rdiff_obj(A2, B2, silent=TRUE), ref.res2)
287s +     h <- identical(Rdiff_obj(A2, B2, minimal=TRUE, silent=TRUE), ref.res3)
287s + 
287s +     # with rds
287s +     f1 <- tempfile()
287s +     f2 <- tempfile()
287s +     saveRDS(A2, f1)
287s +     saveRDS(B2, f2)
287s +     on.exit(unlink(c(f1, f2)))
287s + 
287s +     i <- identical(Rdiff_obj(f1, B2, silent=TRUE), ref.res2)
287s +     j <- identical(Rdiff_obj(A2, f2, silent=TRUE), ref.res2)
287s +     k <- identical(Rdiff_obj(f1, f2, silent=TRUE), ref.res2)
287s + 
287s +     res <- c(a, b, c, d, e, f, g, h, i, k)
287s +     if(!all(res)) stop("Failed: ", deparse(which(!res)))
287s +   })
287s + }
287s > 
287s PASS
287s Begin testing test-s4.R
287s 
287s R version 4.4.3 (2025-02-28) -- "Trophy Case"
287s Copyright (C) 2025 The R Foundation for Statistical Computing
287s Platform: aarch64-unknown-linux-gnu
287s 
287s R is free software and comes with ABSOLUTELY NO WARRANTY.
287s You are welcome to redistribute it under certain conditions.
287s Type 'license()' or 'licence()' for distribution details.
287s 
287s R is a collaborative project with many contributors.
287s Type 'contributors()' for more information and
287s 'citation()' on how to cite R or R packages in publications.
287s 
287s Type 'demo()' for some demos, 'help()' for on-line help, or
287s 'help.start()' for an HTML browser interface to help.
287s Type 'q()' to quit R.
287s 
287s > NAME <- "s4"
287s > source(file.path('_helper', 'init.R'))
288s > 
288s > # - diff data validation works
288s > #
288s > # These are not currently in use
288s > # expect_match(diffobj:::valid_dat("hello"), "should be a list")
288s > # D0 <- D1 <- D2 <- D3 <- D4 <- D5 <- D6 <- D7 <-
288s > #   diffPrint(letters, LETTERS)@tar.dat
288s > 
288s > # expect_match(diffobj:::valid_dat(unname(D0)), "should have names")
288s > 
288s > # length(D1[[1L]]) <- 1L
288s > # expect_match(diffobj:::valid_dat(D1), "should have equal length")
288s > 
288s > # D2$orig <- integer(length(D2$orig))
288s > # expect_match(diffobj:::valid_dat(D2), "should be character")
288s > 
288s > # D3$trim.ind.start <- character(length(D3$trim.ind.start))
288s > # expect_match(diffobj:::valid_dat(D3), "should be integer")
288s > 
288s > # D4$word.ind <- integer(length(D4$word.ind))
288s > # expect_match(diffobj:::valid_dat(D4), "should be list")
288s > 
288s > # D5$word.ind <- vector("list", length(D5$word.ind))
288s > # expect_match(diffobj:::valid_dat(D5), "not in expected format")
288s > 
288s > # D6$tok.rat <- D6$tok.rat + 2
288s > # expect_match(diffobj:::valid_dat(D6), "with all values between")
288s > 
288s > # D7$fill <- integer(length(D7$fill))
288s > # expect_match(diffobj:::valid_dat(D7), "should be logical")
288s > 
288s > # - any ------------------------------------------------------------------------
288s > 
288s > isTRUE(any(diffChr('a', 'b')))
288s [1] TRUE
288s > identical(any(diffChr('a', 'a')), FALSE)
288s [1] TRUE
288s > try(any(diffChr('a', 'a'), 2)) # "supports only one argument"
288s Error : `any` method for `Diff` supports only one argument
288s > 
288s PASS
288s Begin testing test-scaling.R
288s 
288s R version 4.4.3 (2025-02-28) -- "Trophy Case"
288s Copyright (C) 2025 The R Foundation for Statistical Computing
288s Platform: aarch64-unknown-linux-gnu
288s 
288s R is free software and comes with ABSOLUTELY NO WARRANTY.
288s You are welcome to redistribute it under certain conditions.
288s Type 'license()' or 'licence()' for distribution details.
288s 
288s R is a collaborative project with many contributors.
288s Type 'contributors()' for more information and
288s 'citation()' on how to cite R or R packages in publications.
288s 
288s Type 'demo()' for some demos, 'help()' for on-line help, or
288s 'help.start()' for an HTML browser interface to help.
288s Type 'q()' to quit R.
288s 
288s > NAME <- "scaling"
288s > source(file.path('_helper', 'init.R'))
288s > 
288s > # These tests are not actually run since they require manual intervention to
288s > # check for browser rendering
288s > 
288s > # These tests should be run on as many browsers as possible as well as in
288s > # RStudio, and consist of running the code and resizing the windows to see
288s > # what happens
288s > 
288s > if(FALSE) { # prevent running
288s +   # Text should be allowed to unfurl beyond native width
288s + 
288s +   diffStr(mdl1, mdl2, format="html")
288s +   diffStr(mdl1, mdl2, format="html", style=list(scale=FALSE))
288s + 
288s +   diffPrint(c(mdl1), c(mdl2), format="html")
288s + 
288s +   # Revealed problems with pixel rounding in scaling
288s + 
288s +   diffPrint(letters[1:6], LETTERS[1:6], format="html")
288s +   diffPrint(letters[1:6], LETTERS[1:6], format="html", style=list(scale=FALSE))
288s + 
288s +   # Revealed problems with gutter width computations; and scaling
288s + 
288s +   mx.2 <- matrix(1:100, ncol=4)
288s +   mx.4 <- mx.3 <- mx.2
288s +   mx.3[15, 2] <- 111L
288s +   mx.3a <- mx.3[-5, ]
288s +   diffPrint(mx.2, mx.3a, format="html")
288s + 
288s +   # summary stuff
288s + 
288s +   summary(diffPrint(letters, LETTERS, format="html"))
288s +   summary(diffStr(mdl1, mdl2, format="html"))
288s +   summary(diffPrint(c(mdl1), c(mdl2), format="html"))
288s + 
288s +   # Long banners
288s + 
288s +   diffPrint(
288s +     1:20 + 100 + 100 + 100 + 100 + 100 + 100 + 100,
288s +     2:20 + 100 + 100 + 100 + 100 + 100 + 100 + 100,
288s +     format="html", style=list(scale=FALSE)
288s +   )
288s +   diffPrint(
288s +     1:20 + 100 + 100 + 100 + 100 + 100 + 100 + 100,
288s +     2:20 + 100 + 100 + 100 + 100 + 100 + 100 + 100,
288s +     format="html"
288s +   )
288s +   # context
288s + 
288s +   diffPrint(
288s +     1:20 + 100 + 100 + 100 + 100 + 100 + 100 + 100,
288s +     2:20 + 100 + 100 + 100 + 100 + 100 + 100 + 100,
288s +     format="html", mode="context"
288s +   )
288s + }
288s > 
288s PASS
288s Begin testing test-ses.R
288s 
288s R version 4.4.3 (2025-02-28) -- "Trophy Case"
288s Copyright (C) 2025 The R Foundation for Statistical Computing
288s Platform: aarch64-unknown-linux-gnu
288s 
288s R is free software and comes with ABSOLUTELY NO WARRANTY.
288s You are welcome to redistribute it under certain conditions.
288s Type 'license()' or 'licence()' for distribution details.
288s 
288s R is a collaborative project with many contributors.
288s Type 'contributors()' for more information and
288s 'citation()' on how to cite R or R packages in publications.
288s 
288s Type 'demo()' for some demos, 'help()' for on-line help, or
288s 'help.start()' for an HTML browser interface to help.
288s Type 'q()' to quit R.
288s 
288s > NAME <- "ses"
288s > source(file.path('_helper', 'init.R'))
288s > 
288s > # Any tests added here should also be added to the valgrind test file
288s > 
288s > # - basic ----------------------------------------------------------------------
288s > 
288s > all.equal(ses(letters[1:10], letters[1:10]), character())
288s [1] TRUE
288s > all.equal(ses(letters[1:10], LETTERS[1:10]), "1,10c1,10")
288s [1] TRUE
288s > all.equal(ses(letters[1:5], LETTERS[1:10]), "1,5c1,10")
288s [1] TRUE
288s > all.equal(ses(letters[1:10], LETTERS[1:5]), "1,10c1,5")
288s [1] TRUE
288s > all.equal(ses(letters[2:10], letters[1:7]), c("0a1", "7,9d7"))
288s [1] TRUE
288s > all.equal(
288s +   ses(letters[c(1:5, 1:5, 1:5)], c("e", "d", "a", "b", "c")),
288s +   c("1,4d0", "6,8d1", "10d2", "14,15d5")
288s + )
288s [1] TRUE
288s > all.equal(
288s +   ses(c("e", "d", "a", "b", "c"), letters[c(1:5, 1:5, 1:5)]),
288s +   c("0a1,4", "1a6,8", "2a10", "5a14,15")
288s + )
288s [1] TRUE
288s > # edit distance = 1
288s > 
288s > # - trigger edit distance 1 branches -------------------------------------------
288s > 
288s > all.equal(ses("a", c("a", "b")), "1a2")
288s [1] TRUE
288s > all.equal(ses(c("a", "b"), "a"), "2d1")
288s [1] TRUE
288s > all.equal(ses("c", c("b", "c")), "0a1")
288s [1] TRUE
288s > all.equal(ses(c("b", "c"), "c"), "1d0")
288s [1] TRUE
288s > 
288s > all.equal(ses("a", character()), "1d0")
288s [1] TRUE
288s > all.equal(ses(character(), "a"), "0a1")
288s [1] TRUE
288s > all.equal(ses(character(), character()), character())
288s [1] TRUE
288s > 
288s > ## this is from the atomic tests, haven't dug into why they actually trigger
288s > ## the desired branches, but it is fairly complex
288s > set.seed(2)
288s > w1 <- sample(
288s +   c(
288s +   "carrot", "cat", "cake", "eat", "rabbit", "holes", "the", "a", "pasta",
288s +   "boom", "noon", "sky", "hat", "blah", "paris", "dog", "snake"
288s +   ), 25, replace=TRUE
288s + )
288s > w4 <- w3 <- w2 <- w1
288s > w2[sample(seq_along(w1), 5)] <- LETTERS[1:5]
288s > w3 <- w1[8:15]
288s > w4 <- c(w1[1:5], toupper(w1[1:5]), w1[6:15], toupper(w1[1:5]))
288s > 
288s > all.equal(ses(w1, w4), c("5a6,10", "15,21d19", "23,25c21,25"))
288s [1] TRUE
288s > 
288s > # - longer strings -------------------------------------------------------------
288s > 
288s > # A bigger string
288s > 
288s > string <- do.call(paste0, expand.grid(LETTERS, LETTERS, LETTERS))
288s > 
288s > all.equal(
288s +   ses(string, c("hello", string[-c(5, 500, 1000)], "goodbye")),
288s +   c("0a1", "5d5", "500d499", "1000d998", "17576a17575")
288s + )
289s [1] TRUE
289s > all.equal(
289s +   ses(c(string[200:500], "hello", string[-(1:400)][-c(5, 500, 1000)]), string),
289s +   c("0a1,199", "207,306d405", "800a900", "1299a1400")
289s + )
289s [1] TRUE
289s > 
289s > # - max diffs ------------------------------------------------------------------
289s > 
289s > ses(letters[1:10], LETTERS[1:10], max.diffs=5) # "Exceeded `max.diffs`"
289s [1] "1,10c1,10"
289s Warning message:
289s In diff_myers(args[["a"]], args[["b"]], max.diffs = args[["max.diffs"]],  :
289s   Exceeded `max.diffs`: 20 vs 5 allowed. Diff is probably suboptimal.
289s > all.equal(
289s +   ses(letters[1:10], LETTERS[1:10], max.diffs=5, warn=FALSE),
289s +   "1,10c1,10"
289s + )
289s [1] TRUE
289s > all.equal(
289s +   ses(
289s +     letters[1:10],
289s +     c(letters[1], LETTERS[2:5], letters[6:10]), max.diffs=5, warn=FALSE
289s +   ),
289s +   "2,5c2,5"
289s + )
289s [1] TRUE
289s > all.equal(
289s +   ses(
289s +     letters[1:10],
289s +     c(letters[1], LETTERS[2:5], letters[6:8], LETTERS[9], letters[10]),
289s +     max.diffs=5, warn=FALSE
289s +   ),
289s +   c("2,5c2,5", "9c9")
289s + )
289s [1] TRUE
289s > # - Issue 152 --------------------------------------------------------------
289s > 
289s > # h/t @hadley, used to error, now warns
289s > 
289s > all.equal(ses(letters[1:4], letters[1:3]), "4d3")
289s [1] TRUE
289s > all.equal(ses(letters[1:3], letters[1:4]), "3a4")
289s [1] TRUE
289s > ses(1, 2:9, max.diffs = 8)
289s [1] "1c1,8"
289s Warning message:
289s In diff_myers(args[["a"]], args[["b"]], max.diffs = args[["max.diffs"]],  :
289s   Exceeded `max.diffs`: 9 vs 8 allowed. Diff is probably suboptimal.
289s > 
289s > # h/t @gadenbui, data is extracted from palmerpenguins@0.1.0::penguins
289s > #
289s > # comparison <- subset(penguins, year == 2007 | flipper_length_mm > 220)
289s > # test <- subset(penguins, year == 2008)
289s > # a <- test$bill_length_mm
289s > # b <- comparison$bill_length_mm
289s > 
289s > a <- c(39.6, 40.1, 35, 42, 34.5, 41.4, 39, 40.6, 36.5, 37.6, 35.7, 
289s + 41.3, 37.6, 41.1, 36.4, 41.6, 35.5, 41.1, 35.9, 41.8, 33.5, 39.7, 
289s + 39.6, 45.8, 35.5, 42.8, 40.9, 37.2, 36.2, 42.1, 34.6, 42.9, 36.7, 
289s + 35.1, 37.3, 41.3, 36.3, 36.9, 38.3, 38.9, 35.7, 41.1, 34, 39.6, 
289s + 36.2, 40.8, 38.1, 40.3, 33.1, 43.2, 49.1, 48.4, 42.6, 44.4, 44, 
289s + 48.7, 42.7, 49.6, 45.3, 49.6, 50.5, 43.6, 45.5, 50.5, 44.9, 45.2, 
289s + 46.6, 48.5, 45.1, 50.1, 46.5, 45, 43.8, 45.5, 43.2, 50.4, 45.3, 
289s + 46.2, 45.7, 54.3, 45.8, 49.8, 46.2, 49.5, 43.5, 50.7, 47.7, 46.4, 
289s + 48.2, 46.5, 46.4, 48.6, 47.5, 51.1, 45.2, 45.2, 50.5, 49.5, 46.4, 
289s + 52.8, 40.9, 54.2, 42.5, 51, 49.7, 47.5, 47.6, 52, 46.9, 53.5, 
289s + 49, 46.2, 50.9, 45.5)
289s > b <- c(39.1, 39.5, 40.3, NA, 36.7, 39.3, 38.9, 39.2, 34.1, 42, 37.8, 
289s + 37.8, 41.1, 38.6, 34.6, 36.6, 38.7, 42.5, 34.4, 46, 37.8, 37.7, 
289s + 35.9, 38.2, 38.8, 35.3, 40.6, 40.5, 37.9, 40.5, 39.5, 37.2, 39.5, 
289s + 40.9, 36.4, 39.2, 38.8, 42.2, 37.6, 39.8, 36.5, 40.8, 36, 44.1, 
289s + 37, 39.6, 41.1, 37.5, 36, 42.3, 46.1, 50, 48.7, 50, 47.6, 46.5, 
289s + 45.4, 46.7, 43.3, 46.8, 40.9, 49, 45.5, 48.4, 45.8, 49.3, 42, 
289s + 49.2, 46.2, 48.7, 50.2, 45.1, 46.5, 46.3, 42.9, 46.1, 44.5, 47.8, 
289s + 48.2, 50, 47.3, 42.8, 45.1, 59.6, 49.6, 50.5, 50.5, 50.1, 50.4, 
289s + 46.2, 54.3, 49.8, 49.5, 50.7, 46.4, 48.2, 48.6, 45.2, 52.5, 50, 
289s + 50.8, 52.1, 52.2, 49.5, 50.8, 46.9, 51.1, 55.9, 49.1, 49.8, 51.5, 
289s + 55.1, 48.8, 50.4, 46.5, 50, 51.3, 45.4, 52.7, 45.2, 46.1, 51.3, 
289s + 46, 51.3, 46.6, 51.7, 47, 52, 45.9, 50.5, 50.3, 58, 46.4, 49.2, 
289s + 42.4, 48.5, 43.2, 50.6, 46.7, 52)
289s > 
289s > # In <0.3.4: Exceeded buffer for finding fake snake
289s > ses(a[-c(15:38, 50:90)], b[-c(40:85, 100:125)], max.diffs=80)
289s [1] "1,3c1,9"     "5,13c11,12"  "15,25c14,48" "26a50"       "28,29d51"   
289s [6] "31c53,57"    "33c59,60"    "35,42c62,67" "44,49d68"   
289s Warning message:
289s In diff_myers(args[["a"]], args[["b"]], max.diffs = args[["max.diffs"]],  :
289s   Exceeded `max.diffs`: 101 vs 80 allowed. Diff is probably suboptimal.
289s > 
289s > # In <0.3.4: Faux Snake Process Failed
289s > ses(a[-(18:38)], b[-(50:80)], max.diffs=115)
289s  [1] "1,3c1,9"       "5,7c11,26"     "9,12c28,38"    "13a40,46"     
289s  [5] "15,54c48,82"   "56,68d83"      "70,74c85,88"   "75a90,98"     
289s  [9] "77c100,101"    "79,86c103,108" "88,93d109"    
289s Warning message:
289s In diff_myers(args[["a"]], args[["b"]], max.diffs = args[["max.diffs"]],  :
289s   Exceeded `max.diffs`: 182 vs 115 allowed. Diff is probably suboptimal.
289s > 
289s > # - issue 157 ------------------------------------------------------------------
289s > 
289s > # Arguably could match on 'A' instead of 'X' and be more compact
289s > a <- c('a', 'b', 'c', 'A', 'X', 'Y', 'Z', 'W')
289s > b <- c('X', 'C', 'A', 'U', 1, 2, 3)
289s > ses(a, b, max.diffs=13)
289s [1] "1,4d0"   "6,8c2,7"
289s > 
289s > # segfault (but may have beend debugging code)
289s > ses(letters[1:2], LETTERS[1:2], max.diffs = 4)
289s [1] "1,2c1,2"
289s > 
289s > # snake overrun
289s > ses(c("G", "C", "T", "C", "A", "C", "G", "C"), c("T", "G"), max.diffs=2)
289s [1] "0a1"   "2,8d2"
289s Warning message:
289s In diff_myers(args[["a"]], args[["b"]], max.diffs = args[["max.diffs"]],  :
289s   Exceeded `max.diffs`: 8 vs 2 allowed. Diff is probably suboptimal.
289s > 
289s > # effect of max.diffs on compactness (waldo logical comparison)
289s > ses(c('A','A','A','A','A'), c('B','A','B','A','B'), max.diffs=0)
289s [1] "1c1" "3c3" "5c5"
289s Warning message:
289s In diff_myers(args[["a"]], args[["b"]], max.diffs = args[["max.diffs"]],  :
289s   Exceeded `max.diffs`: 6 vs 0 allowed. Diff is probably suboptimal.
289s > ses(c('A','A','A','A','A'), c('B','A','B','A','B'), max.diffs=1)
289s [1] "0a1"   "2c3"   "4,5c5"
289s Warning message:
289s In diff_myers(args[["a"]], args[["b"]], max.diffs = args[["max.diffs"]],  :
289s   Exceeded `max.diffs`: 6 vs 1 allowed. Diff is probably suboptimal.
289s > ses(c('A','A','A','A','A'), c('B','A','B','A','B'), max.diffs=2)
289s [1] "0a1"   "2,4c3" "5a5"  
289s Warning message:
289s In diff_myers(args[["a"]], args[["b"]], max.diffs = args[["max.diffs"]],  :
289s   Exceeded `max.diffs`: 6 vs 2 allowed. Diff is probably suboptimal.
289s > 
289s > # back snake all matches before faux snake triggered
289s > ses_dat(
289s +   a=c("T", "A", "A", "C", "C", "A"),
289s +   b=c("A", "G", "A", "A"), max.diffs = 0
289s + )
289s "ses_dat" object (Match: 3, Delete: 3, Insert: 1):
289s                 
289s D: T       C C  
289s M:   A   A     A
289s I:     G        
289s Warning message:
289s In diff_myers(args[["a"]], args[["b"]], max.diffs = args[["max.diffs"]],  :
289s   Exceeded `max.diffs`: 4 vs 0 allowed. Diff is probably suboptimal.
289s > 
289s > # - errors ---------------------------------------------------------------------
289s > 
289s > try(ses('a', 'b', max.diffs='hello')) # "must be scalar integer"
289s Error in ses_prep(a = a, b = b, max.diffs = max.diffs, warn = warn) : 
289s   Argument `max.diffs` must be scalar integer.
289s > try(ses('a', 'b', warn='hello'))      # "must be TRUE or FALSE"
289s Error in ses_prep(a = a, b = b, max.diffs = max.diffs, warn = warn) : 
289s   Argument `warn` must be TRUE or FALSE.
289s > 
289s > a <- structure(1, class='diffobj_ogewlhgiadfl2')
289s > try(ses(a, 1)) # "could not be coerced")
289s Error in as.character.diffobj_ogewlhgiadfl2(a) : failure2
289s Error in ses_prep(a = a, b = b, max.diffs = max.diffs, warn = warn) : 
289s   Argument `a` is not character and could not be coerced to such
289s > try(ses(1, a)) # "could not be coerced"
289s Error in as.character.diffobj_ogewlhgiadfl2(b) : failure2
289s Error in ses_prep(a = a, b = b, max.diffs = max.diffs, warn = warn) : 
289s   Argument `b` is not character and could not be coerced to such
289s > 
289s > # We want to have a test file that fully covers the C code in order to run
289s > # valgrind with just that one.  We were unable to isolate simple diffs that
289s > # triggered all the code, but we were able to do it with the below in addition
289s > # to the above.
289s > 
289s > # - Repeat tests for full coverage in SES file ---------------------------------
289s > # From test.diffStr.R
289s > # formula display changed
289s > if(
289s +   R.Version()$major >= 3 && R.Version()$minor >= "3.1" ||
289s +   R.Version()$major >= 4) {
289s +   rdsf1 <- function(x)
289s +     readRDS(file.path("_helper", "objs", "diffStr", sprintf("%s.rds", x)))
289s +   all.equal(
289s +     as.character(
289s +       diffStr(mdl1, mdl2, extra=list(strict.width="wrap"), line.limit=30)
289s +     ),
289s +     rdsf1(500)
289s +   )
289s + }
289s [1] TRUE
289s > # from testthat.warnings.R
289s > 
289s > A3 <- c("a b c", "d e f A B C D", "g h i", "f")
289s > B3 <- c("a b c", "xd e f E Q L S", "g h i", "q")
289s > 
289s > diffChr(A3, B3, max.diffs=2) # warn: "Exceeded diff"
289s [33m<[39m [33mA3[39m              [34m>[39m [34mB3[39m            
289s [36m@@ 1,4 @@       [39m  [36m@@ 1,4 @@       [39m
289s   [90m[39ma b c[90m[39m             [90m[39ma b c[90m[39m         
289s [33m<[39m [90m[39m[33md[39m [33me[39m [33mf[39m [33mA[39m [33mB[39m [33mC[39m [33mD[39m[90m[39m   [34m>[39m [90m[39m[34mxd[39m [34me[39m [34mf[39m [34mE[39m [34mQ[39m [34mL[39m [34mS[39m[90m[39m
289s [33m<[39m [90m[39m[33mg[39m [33mh[39m [33mi[39m[90m[39m           [34m>[39m [90m[39m[34mg[39m [34mh[39m [34mi[39m[90m[39m         
289s [33m<[39m [90m[39m[33mf[39m[90m[39m               [34m>[39m [90m[39m[34mq[39m[90m[39m             
289s Warning message:
289s Exceeded diff limit during diff computation (6 vs. 2 allowed); overall diff is likely not optimal 
289s > 
289s > # - ses_dat --------------------------------------------------------------------
289s > 
289s > a <- b <- do.call(paste0, expand.grid(LETTERS, LETTERS))
289s > set.seed(2)
289s > b <- b[-sample(length(b), 100)]
289s > a <- a[-sample(length(b), 100)]
289s > 
289s > dat <- ses_dat(a, b)
289s > all.equal(dat[['val']][dat[['op']] != 'Delete'], b)
289s [1] TRUE
289s > all.equal(dat[['val']][dat[['op']] != 'Insert'], a)
289s [1] TRUE
289s > all.equal(a[dat[['id.a']][!is.na(dat[['id.a']])]], a)
289s [1] TRUE
289s > 
289s > dat2 <- ses_dat(a, b, extra=FALSE)
289s > all.equal(dat[1:2], dat2)
289s [1] TRUE
289s > all.equal(length(dat2), 2L)
289s [1] TRUE
289s > 
289s > try(ses_dat(a, b, extra=NA)) # 'TRUE or FALSE'
289s Error in ses_dat(a, b, extra = NA) : 
289s   Argument `extra` must be TRUE or FALSE.
289s > 
289s > # - encoding agnostic #144 -----------------------------------------------------
289s > 
289s > # h/t @hadley, these are different in string cache, but should compare equal
289s > # as per ?identical
289s > x <- c("fa\xE7ile", "fa\ue7ile")
289s > Encoding(x) <- c("latin1", "UTF-8")
289s > y <- rev(x)
289s > all.equal(diffobj::ses(x, y), character())
289s [1] TRUE
289s > 
289s PASS
289s Begin testing test-style.R
289s 
289s R version 4.4.3 (2025-02-28) -- "Trophy Case"
289s Copyright (C) 2025 The R Foundation for Statistical Computing
289s Platform: aarch64-unknown-linux-gnu
289s 
289s R is free software and comes with ABSOLUTELY NO WARRANTY.
289s You are welcome to redistribute it under certain conditions.
289s Type 'license()' or 'licence()' for distribution details.
289s 
289s R is a collaborative project with many contributors.
289s Type 'contributors()' for more information and
289s 'citation()' on how to cite R or R packages in publications.
289s 
289s Type 'demo()' for some demos, 'help()' for on-line help, or
289s 'help.start()' for an HTML browser interface to help.
289s Type 'q()' to quit R.
289s 
289s > NAME <- "style"
289s > source(file.path('_helper', 'init.R'))
289s > 
289s > ## - Style Palette ------------------------------------------------------------
289s > 
289s > all.equal(
289s +   capture.output(diffobj:::display_ansi_256_styles()),
289s +   rdsf(100)
289s + )
290s [1] TRUE
290s > ## - crayon settings -----------------------------------------------------------
290s > 
290s >   # make sure crayon options are appropriately overriden
290s > local({
290s +   old.opt <- options(crayon.enabled=FALSE)
290s +   on.exit(options(old.opt))
290s +   print(identical(crayon::green("green"), "green"))
290s +   # should have ANSI coloring despite crayon disabled
290s +   print(
290s +     all.equal(
290s +       as.character(diffChr(letters[1:3], LETTERS[1:3])), rdsf(200)
290s +     )
290s +   )
290s +   identical(crayon::green("green"), "green")
290s + })
290s [1] TRUE
290s [1] TRUE
290s [1] TRUE
290s > ## - Palette of Styles ---------------------------------------------------------
290s > 
290s > pos <- PaletteOfStyles()
290s > identical(
290s +   pos[["ansi256", "light", "rgb"]],
290s +   getClassDef("StyleAnsi256LightRgb", package="diffobj", inherits=FALSE)
290s + )
290s [1] TRUE
290s > all.equal(
290s +   capture.output(show(pos)), rdsf(300)
290s + )
291s [1] TRUE
291s > all.equal(
291s +   capture.output(summary(pos)), rdsf(400)
291s + )
291s [1] TRUE
291s > 
291s > pos["ansi256", "light", "yb"] <- list(StyleRaw())
291s > all.equal(
291s +   c(pos["ansi256", "light", "yb"]@data), list(StyleRaw()),
291s +   check.environment=FALSE
291s + )
291s [1] TRUE
291s > all.equal(
291s +   pos[["ansi256", "light", "yb"]], StyleRaw(),
291s +   check.environment=FALSE
291s + )
291s [1] TRUE
291s > 
291s > ## - Auto Styles ---------------------------------------------------------------
291s > 
291s > try(diffChr(letters, LETTERS, style="auto", format="xml"))
291s Error in diffChr(target = letters, current = LETTERS, style = "auto",  : 
291s   Argument `format` must be one of `c("auto", "raw", "ansi8", "ansi256", "html")`.
291s > is(
291s +   diffChr(
291s +     letters, LETTERS, style="auto", format="auto", brightness="light",
291s +     term.colors=256
291s +   )@etc@style,
291s +   "StyleAnsi256LightYb"
291s + )
291s [1] TRUE
291s > is(
291s +   diffChr(
291s +     letters, LETTERS, style="auto", format="auto", brightness="light",
291s +     term.colors=8
291s +   )@etc@style,
291s +   "StyleAnsi8NeutralYb"
291s + )
291s [1] TRUE
291s > is(
291s +   diffChr(
291s +     letters, LETTERS, style="auto", format="auto", interactive=FALSE,
291s +     term.colors=1
291s +   )@etc@style,
291s +   "StyleRaw"
291s + )
291s [1] TRUE
291s > is(
291s +   diffChr(
291s +     letters, LETTERS, style="auto", format="auto", interactive=TRUE,
291s +     term.colors=1  # note pager off by default in tests
291s +   )@etc@style,
291s +   "StyleRaw"
291s + )
291s [1] TRUE
291s > is(
291s +   diffChr(
291s +     letters, LETTERS, style="auto", format="auto", interactive=TRUE,
291s +     pager="auto", term.colors=1
291s +   )@etc@style,
291s +   "StyleHtml"
291s + )
291s [1] TRUE
291s > is(
291s +   diffChr(
291s +     letters, LETTERS, style="auto", format="auto", interactive=TRUE,
291s +     pager="auto", term.colors=9
291s +   )@etc@style,
291s +   "StyleAnsi8NeutralYb"
291s + )
291s [1] TRUE
291s > is(
291s +   diffChr(
291s +     letters, LETTERS, style="auto", format="auto", interactive=TRUE,
291s +     pager="auto", brightness='light', term.colors=500
291s +   )@etc@style,
291s +   "StyleAnsi256LightYb"
291s + )
291s [1] TRUE
291s > is(
291s +   diffChr(
291s +     letters, LETTERS, style="auto", format="html", interactive=TRUE,
291s +     pager="auto", color.mode=c("rgb", ansi8="yb")
291s +   )@etc@style,
291s +   "StyleHtmlLightRgb"
291s + )
291s [1] TRUE
291s > is(
291s +   diffChr(
291s +     letters, LETTERS, style="auto", format="html", interactive=TRUE,
291s +     pager="auto", color.mode=c("rgb", html="yb")
291s +   )@etc@style,
291s +   "StyleHtmlLightYb"
291s + )
291s [1] TRUE
291s > ## - Palette Params ------------------------------------------------------------
291s > 
291s > all.equal(
291s +   as.character(
291s +     diffChr(
291s +       letters, LETTERS, style="auto", format="ansi256",
291s +       brightness=c("light", ansi256="dark")
291s +   ) ),
291s +   rdsf(500)
291s + )
291s [1] TRUE
291s > all.equal(
291s +   as.character(
291s +     diffChr(
291s +       letters, LETTERS, style="auto", format="ansi256", brightness=c("dark")
291s +   ) ),
291s +   rdsf(500)
291s + )
291s [1] TRUE
291s > ## - Style Validation ----------------------------------------------------------
291s > 
291s > s.f <- StyleFuns()
291s > isTRUE(validObject(s.f))
291s [1] TRUE
291s > s.f@word.insert <- function(x, y) NULL
291s > try(validObject(s.f)) # word.insert
291s Error in validObject(s.f) : 
291s   invalid class "StyleFuns" object: Argument `word.insert` may not have non-default formals argument after the first.
291s > 
291s > try(diffChr(1,2, format='html', style=list(scale=1:3)))
291s Error in diffChr(target = 1, current = 2, format = "html", style = list(scale = 1:3)) : 
291s   Unable to instantiate `Style` object: Argument `scale` must be TRUE or FALSE
291s > try(diffChr(1,2, format='html', style=list(html.output="a")))
291s Error in diffChr(target = 1, current = 2, format = "html", style = list(html.output = "a")) : 
291s   Unable to instantiate `Style` object: Argument `html.output` must be in `c("auto", "page", "diff.only", "diff.w.style")`.
291s > 
291s > ## - Pallette w/ Objs ----------------------------------------------------------
291s > 
291s > pal <- PaletteOfStyles()
291s > pal["raw", "neutral", "rgb"] <- list(new(pal[["raw", "neutral", "rgb"]]))
291s > 
291s > suppressWarnings(
291s +   withCallingHandlers(
291s +     invisible(diffChr(
291s +       letters, LETTERS, format="raw", brightness="neutral", color.mode="rgb",
291s +       palette.of.styles=pal, style=list(na.sub="NA")
291s +     )),
291s +     warning=function(e) writeLines(conditionMessage(e))
291s +   )
291s + )
291s Extra `style` arguments cannot be applied because selected object `palette.of.styles` is a `Style` instance rather than a `Style` "classRepresentation".  See documentation for the `style` parameter for details.
291s > ## - External Files ------------------------------------------------------------
291s > 
291s > isTRUE(file_test("-f", diffobj_css()))
291s [1] TRUE
291s > isTRUE(file_test("-f", diffobj_js()))
291s [1] TRUE
291s > 
291s PASS
291s Begin testing test-subset.R
291s 
291s R version 4.4.3 (2025-02-28) -- "Trophy Case"
291s Copyright (C) 2025 The R Foundation for Statistical Computing
291s Platform: aarch64-unknown-linux-gnu
291s 
291s R is free software and comes with ABSOLUTELY NO WARRANTY.
291s You are welcome to redistribute it under certain conditions.
291s Type 'license()' or 'licence()' for distribution details.
291s 
291s R is a collaborative project with many contributors.
291s Type 'contributors()' for more information and
291s 'citation()' on how to cite R or R packages in publications.
291s 
291s Type 'demo()' for some demos, 'help()' for on-line help, or
291s 'help.start()' for an HTML browser interface to help.
291s Type 'q()' to quit R.
291s 
291s > NAME <- "subset"
291s > source(file.path('_helper', 'init.R'))
291s > 
291s > A <- B <- letters[1:5]
291s > B[2] <- "B"
291s > B[6] <- "F"
291s > 
291s > # - subset ---------------------------------------------------------------------
291s > 
291s > local({
291s +   old.opt <- options(diffobj.style=StyleRaw())
291s +   on.exit(options(old.opt))
291s +   a0 <- all.equal(
291s +     c(as.character(diffChr(A, B)[1:3])),
291s +     c("< A          > B        ", "@@ 1,5 @@    @@ 1,6 @@  ", "  a            a        ")
291s + 
291s +   )
291s +   a <- all.equal(
291s +     c(as.character(diffChr(A, B)[1])), c(as.character(head(diffChr(A, B), 1)))
291s +   )
291s +   b <- all.equal(
291s +     c(as.character(diffChr(A, B)[7:8])), c(as.character(tail(diffChr(A, B), 2)))
291s +   )
291s +   c(a0, a, b)
291s + })
292s [1] TRUE TRUE TRUE
292s > # - subset errors --------------------------------------------------------------
292s > 
292s > diff <- diffChr(A, B)
292s > try(diff[NA_real_]) # "contain NAs or both positive"
292s Error in .local(x, i, ...) : 
292s   `i` may not contain NAs or both positive and negative indices
292s > try(diff[c(-1, 1)]) # "contain NAs or both positive"
292s Error in .local(x, i, ...) : 
292s   `i` may not contain NAs or both positive and negative indices
292s > try(head(diff, 1, 2)) # "does not support arguments"
292s Error in .local(x, ...) : 
292s   This method does not support arguments other than `x` or `n`
292s > try(head(diff, NA)) # "must be integer"
292s Error in .local(x, ...) : `n` must be integer(1L) and not NA
292s > try(head(diff, 1:3)) # "must be integer"
292s Error in .local(x, ...) : `n` must be integer(1L) and not NA
292s > try(tail(diff, 1:3)) # "must be integer"
292s Error in .local(x, ...) : `n` must be integer(1L) and not NA
292s > try(tail(diff, 1, 2)) # "does not support arguments"
292s Error in .local(x, ...) : 
292s   This method does not support arguments other than `x` or `n`
292s > 
292s > 
292s > 
292s PASS
292s Begin testing test-summary.R
292s 
292s R version 4.4.3 (2025-02-28) -- "Trophy Case"
292s Copyright (C) 2025 The R Foundation for Statistical Computing
292s Platform: aarch64-unknown-linux-gnu
292s 
292s R is free software and comes with ABSOLUTELY NO WARRANTY.
292s You are welcome to redistribute it under certain conditions.
292s Type 'license()' or 'licence()' for distribution details.
292s 
292s R is a collaborative project with many contributors.
292s Type 'contributors()' for more information and
292s 'citation()' on how to cite R or R packages in publications.
292s 
292s Type 'demo()' for some demos, 'help()' for on-line help, or
292s 'help.start()' for an HTML browser interface to help.
292s Type 'q()' to quit R.
292s 
292s > NAME <- "summary"
292s > source(file.path('_helper', 'init.R'))
292s > 
292s > # Note, atomic prints happen in different test file
292s > 
292s > # - Any ------------------------------------------------------------------------
292s > 
292s > identical(any(diffPrint(iris.s, iris.s)), FALSE)
292s [1] TRUE
292s > res <- any(diffPrint(iris.s, iris.c)) # warn:  "objects are NOT"
292s Warning message:
292s No visible differences, but objects are NOT `all.equal`. 
292s > identical(res, FALSE)
292s [1] TRUE
292s > isTRUE(any(diffPrint(iris.s, iris.4)))
292s [1] TRUE
292s > 
292s > 
292s > # - Small Summary --------------------------------------------------------------
292s > 
292s > all.equal(
292s +   as.character(summary(diffPrint(iris.s, iris.4))), rdsf(100)
292s + )
292s [1] TRUE
292s > all.equal(
292s +   as.character(summary(diffPrint(iris.s, iris.2))), rdsf(200)
292s + )
292s [1] TRUE
292s > all.equal(
292s +   as.character(summary(diffPrint(iris.s, iris.3))), rdsf(300)
292s + )
292s [1] TRUE
292s > all.equal(
292s +   as.character(summary(diffPrint(iris.s, iris.c))), rdsf(400)
292s + )
292s [1] TRUE
292s > # All equal
292s > 
292s > all.equal(
292s +   as.character(summary(diffChr(letters, letters))), rdsf(450)
292s + )
292s [1] TRUE
292s > 
292s > # - Big Summary ----------------------------------------------------------------
292s > 
292s > # Make sure we test summary reduction, wrapping
292s > 
292s > all.equal(
292s +   as.character(summary(diffChr(chr.7, chr.8))), rdsf(500)
292s + )
292s [1] TRUE
292s > all.equal(
292s +   as.character(summary(diffChr(chr.7, chr.8), scale.threshold=1)), rdsf(600)
292s + )
293s [1] TRUE
293s > all.equal(
293s +   as.character(summary(diffChr(chr.7, chr.8), scale.threshold=0)), rdsf(700)
293s + )
293s [1] TRUE
293s > # Force truncation of summary
293s > all.equal(
293s +   as.character(
293s +     summary(diffChr(chr.7, chr.8), scale.threshold=0, max.lines=2)
293s +   ),
293s +   rdsf(800)
293s + )
293s [1] TRUE
293s > 
293s > # - Show -----------------------------------------------------------------------
293s > 
293s > isTRUE(
293s +   paste0(capture.output(summary(diffChr(chr.7, chr.8))), collapse="\n") ==
293s +   as.character(summary(diffChr(chr.7, chr.8)))
293s + )
293s [1] TRUE
293s > 
293s > # - HTML summary ---------------------------------------------------------------
293s > 
293s > all.equal(
293s +   as.character(
293s +     summary(
293s +       diffPrint(
293s +         iris.s, iris.4, format="html", style=list(html.output="page")
293s +   ) ) ),
293s +   rdsf(900)
293s + )
293s [1] TRUE
293s > 
293s > # - errors ---------------------------------------------------------------------
293s > 
293s > diff <- diffChr("hello green world", "hello red world")
293s > try(summary(diff, max.lines=0)) # "strictly positive"
293s Error in .local(object, ...) : 
293s   Argument `max.lines` must be integer(1L) and strictly positive
293s > try(summary(diff, width=1:3)) # "integer\\(1L\\)"
293s Error in .local(object, ...) : 
293s   Argument `width` must be integer(1L) and positive
293s > try(summary(diff, scale.threshold=5)) # "between 0 and 1"
293s Error in .local(object, ...) : 
293s   Argument `scale.threshold` must be numeric(1L) between 0 and 1
293s > 
293s > # - width wrap -----------------------------------------------------------------
293s > 
293s > diff <- diffChr("hello green world", "hello red world", format='raw')
293s > all.equal(capture.output(show(summary(diff, width=5))), txtf(100))
293s [1] TRUE
293s > 
293s > 
293s PASS
293s Begin testing test-text.R
293s 
293s R version 4.4.3 (2025-02-28) -- "Trophy Case"
293s Copyright (C) 2025 The R Foundation for Statistical Computing
293s Platform: aarch64-unknown-linux-gnu
293s 
293s R is free software and comes with ABSOLUTELY NO WARRANTY.
293s You are welcome to redistribute it under certain conditions.
293s Type 'license()' or 'licence()' for distribution details.
293s 
293s R is a collaborative project with many contributors.
293s Type 'contributors()' for more information and
293s 'citation()' on how to cite R or R packages in publications.
293s 
293s Type 'demo()' for some demos, 'help()' for on-line help, or
293s 'help.start()' for an HTML browser interface to help.
293s Type 'q()' to quit R.
293s 
293s > NAME <- "text"
293s > source(file.path('_helper', 'init.R'))
294s > 
294s > # - simple wrap
294s > 
294s > txt1 <- c(
294s +   "humpty dumpty sat on a wall and had a big fall",
294s +   "humpty sat on a wall and dumped a big fall"
294s + )
294s > res1 <- diffobj:::wrap(txt1, 10, TRUE, sgr.supported=TRUE)
294s > 
294s > identical(
294s +   gsub(" *$", "", vapply(res1, paste0, character(1L), collapse="")), txt1
294s + )
294s [1] TRUE
294s > all.equal(lapply(res1, nchar), list(rep(10L, 5L), rep(10L, 5L)))
294s [1] TRUE
294s > 
294s > txt2 <- "hello world!"
294s > identical(
294s +   unlist(diffobj:::wrap(txt2, nchar(txt2), TRUE, sgr.supported=TRUE)),
294s +   txt2
294s + )
294s [1] TRUE
294s > identical(
294s +   paste0(
294s +     unlist(diffobj:::wrap(txt2, nchar(txt2) / 2, TRUE, sgr.supported=TRUE)),
294s +     collapse=""
294s +   ),
294s +   txt2
294s + )
294s [1] TRUE
294s > 
294s > # - wrap with escape sequences
294s > 
294s > txt3 <- c(
294s +   paste0(
294s +     "humpty dumpty ", crayon::style("sat on a wall", "red"),
294s +     " and had a big fall",
294s +     crayon::style(
294s +       crayon::style(
294s +         "humpty sat on a wall and dumped a big fall",
294s +         "green"
294s +       ),
294s +       "bgRed"
294s +     ), "woohoo"
294s +   ),
294s +   paste0(
294s +     crayon::style("hello ", "inverse"), "beautiful ",
294s +     crayon::style("world", "blue")
294s +   )
294s + )
294s > res3 <- diffobj:::wrap(txt3, 10, TRUE, sgr.supported=TRUE)
294s > 
294s > identical(
294s +   crayon::strip_style(
294s +     gsub(" *$", "", vapply(res3, paste0, character(1L), collapse=""))
294s +   ),
294s +   crayon::strip_style(txt3)
294s + )
294s [1] TRUE
294s > all.equal(
294s +   lapply(res3, crayon::col_nchar),
294s +   list(rep(10L, 10L), rep(10L, 3L))
294s + )
294s [1] TRUE
294s > 
294s > # - strip hz whitespace
294s > 
294s > options(crayon.enabled=FALSE)
294s > all.equal(
294s +   diffobj:::strip_hz_control("a\tb", stops=4L, sgr.supported=TRUE), "a   b")
294s [1] TRUE
294s > all.equal(
294s +   diffobj:::strip_hz_control("ab\t", stops=4L, sgr.supported=TRUE), "ab  ")
294s [1] TRUE
294s > all.equal(
294s +   diffobj:::strip_hz_control("a\tb\t", stops=4L, sgr.supported=TRUE), "a   b   ")
294s [1] TRUE
294s > all.equal(
294s +   diffobj:::strip_hz_control("\ta\tb\t", stops=4L, sgr.supported=TRUE), 
294s +   "    a   b   "
294s + )
294s [1] TRUE
294s > all.equal(
294s +   diffobj:::strip_hz_control("\ta\tb\t", stops=c(2L, 4L), sgr.supported=TRUE),
294s +   "  a   b   "
294s + )
294s [1] TRUE
294s > all.equal(
294s +   diffobj:::strip_hz_control(
294s +     c("ab\t", "\ta\tb\t"), sgr.supported=TRUE, stops=4L
294s +   ),
294s +   c("ab  ", "    a   b   ")
294s + )
294s [1] TRUE
294s > # recall that nchar("\033") == 1
294s > all.equal(
294s +   diffobj:::strip_hz_control(
294s +     "\033[31ma\t\033[39mhello\tb", stops=10L, sgr.supported=FALSE
294s +   ),
294s +   "\033[31ma    \033[39mhello          b"
294s + )
294s [1] TRUE
294s > all.equal(
294s +   diffobj:::strip_hz_control(
294s +     "\033[31ma\t\033[39mhello\tb", stops=10L, sgr.supported=TRUE
294s +   ),
294s +   "\033[31ma\033[39m         \033[31m\033[39mhello     \033[31m\033[39mb"
294s + )
294s [1] TRUE
294s > # carriage returns
294s > 
294s > all.equal(
294s +   diffobj:::strip_hz_control("hellothere\rHELLO", sgr.supported=TRUE),
294s +   "HELLOthere"
294s + )
294s [1] TRUE
294s > all.equal(
294s +   diffobj:::strip_hz_control(
294s +     c("hellothere\rHELLO", "000\r12345678\rabcdef\rABC"), sgr.supported=TRUE
294s +   ),
294s +   c("HELLOthere", "ABCdef78")
294s + )
294s [1] TRUE
294s > all.equal(
294s +   diffobj:::strip_hz_control("hellothere\r", sgr.supported=TRUE),
294s +   "hellothere"
294s + )
294s [1] TRUE
294s > all.equal(
294s +   diffobj:::strip_hz_control(character(), sgr.supported=TRUE), character()
294s + )
294s [1] TRUE
294s > # newlines
294s > 
294s > all.equal(
294s +   diffobj:::strip_hz_control(c("a", "", "\n", "a\nb"), sgr.supported=TRUE),
294s +   c("a", "", "", "a", "b")
294s + )
294s [1] TRUE
294s > # with colors
294s > 
294s > options(crayon.enabled=TRUE)
294s > 
294s > all.equal(
294s +   crayon::strip_style(
294s +     diffobj:::strip_hz_control(
294s +       "\033[31ma\t\033[39mhello\tb", stops=10L, sgr.supported=TRUE)
294s +   ),
294s +   "a         hello     b"
294s + )
294s [1] TRUE
294s > test.chr <- paste0(
294s +   crayon::red(crayon::`%+%`("000",  crayon::bgBlue("\r12345678"))),
294s +   "\rabcdef", crayon::green("\rABC")
294s + )
294s > # visually inspect these
294s > 
294s > # cat("\n")
294s > # cat(test.chr, sep="\n")
294s > res <- diffobj:::strip_hz_control(test.chr, sgr.supported=TRUE)
294s > # cat(res, sep="\n")
294s > all.equal(crayon::strip_style(res), "ABCdef78")
294s [1] TRUE
294s > 
294s > # Mix tabs and carriage returns, visual inspection assumes terminal tab
294s > # stops at 8L; note output not exactly the same since it seems tabs don't
294s > # ovewrite prior screen state whereas spaces do
294s > 
294s > test.chr.2 <- paste0(
294s +   crayon::red(crayon::`%+%`("000", crayon::bgBlue("\r123\t456\t78"))),
294s +   "\rab\tcd f", crayon::green("\rABC")
294s + )
294s > # cat("\n")
294s > # cat(test.chr.2, sep="\n")
294s > res.2 <- diffobj:::strip_hz_control(test.chr.2, stops=8L, sgr.supported=TRUE)
294s > # cat(res.2, sep="\n")
294s > 
294s > all.equal(crayon::strip_style(res.2), "ABC     cd f    78")
294s [1] TRUE
294s > 
294s > # multi line
294s > 
294s > test.chr.3 <- c(test.chr, test.chr.2)
294s > # cat("\n")
294s > res.3 <- diffobj:::strip_hz_control(test.chr.3, sgr.supported=TRUE)
294s > # cat(res.3, sep="\n")
294s > # cat(test.chr.3, sep="\n")
294s > 
294s > all.equal(crayon::strip_style(res.3), c("ABCdef78", "ABC     cd f    78"))
294s [1] TRUE
294s > 
294s > 
294s PASS
294s Begin testing test-trim.R
294s 
294s R version 4.4.3 (2025-02-28) -- "Trophy Case"
294s Copyright (C) 2025 The R Foundation for Statistical Computing
294s Platform: aarch64-unknown-linux-gnu
294s 
294s R is free software and comes with ABSOLUTELY NO WARRANTY.
294s You are welcome to redistribute it under certain conditions.
294s Type 'license()' or 'licence()' for distribution details.
294s 
294s R is a collaborative project with many contributors.
294s Type 'contributors()' for more information and
294s 'citation()' on how to cite R or R packages in publications.
294s 
294s Type 'demo()' for some demos, 'help()' for on-line help, or
294s 'help.start()' for an HTML browser interface to help.
294s Type 'q()' to quit R.
294s 
294s > NAME <- "trim"
294s > source(file.path('_helper', 'init.R'))
294s > 
294s > .mx.base <- matrix(
294s +   c(
294s +     "averylongwordthatcanlahblah", "causeasinglewidecolumnblah",
294s +     "matrixtowrapseveraltimes", "inarrowscreen", "onceuponatime",
294s +     "agreenduckflew", "overthemountains", "inalongofantelopes",
294s +     "ineedthreemore", "entriesactually", "nowonlytwomore", "iwaswrongearlier"
294s +   ),
294s +   nrow=3, ncol=4
294s + )
294s > 
294s > # - Atomic ---------------------------------------------------------------------
294s > 
294s > set.seed(1)
294s > x <- capture.output(1:50)
294s > y <- capture.output(factor(sample(letters, 50, replace=TRUE)))
294s > 
294s > all.equal(
294s +   diffobj:::strip_atomic_rh(x),
294s +   c(" 1  2  3  4  5  6  7  8  9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25", "26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50")
294s + )
294s [1] TRUE
294s > all.equal(
294s +   diffobj:::strip_atomic_rh(y),
294s +   c("g j o x f x y r q b f e r j u m s z j u y f q d g k a j w i m p m e v r u c", "s k v q u o n u a m t s", "Levels: a b c d e f g i j k m n o p q r s t u v w x y z")
294s + )
294s [1] TRUE
294s > all.equal(diffobj:::which_atomic_rh(capture.output(1:5)), 1)
294s [1] TRUE
294s > 
294s > all.equal(as.character(diffPrint(1:3, 2:6, trim=FALSE)), rdsf(50))
294s [1] TRUE
294s > 
294s > # bad headers
294s > 
294s > bh <- c("[1] a b c", "[4] d e f", "[5] h")
294s > all.equal(diffobj:::which_atomic_rh(bh), integer())
294s [1] TRUE
294s > 
294s > # - Matrix
294s > mx1 <- mx2 <- matrix(1:3, 3)
294s > all.equal(
294s +   diffobj:::strip_matrix_rh(capture.output(mx1), dimnames(mx1)),
294s +   c("     [,1]", "   1", "   2", "   3")
294s + )
294s [1] TRUE
294s > # shouldn't strip headers from attributes
294s > attr(mx2, "blah") <- matrix(1:2, 2)
294s > all.equal(
294s +   diffobj:::strip_matrix_rh(capture.output(mx2), dimnames(mx2)),
294s +   c("     [,1]", "   1", "   2", "   3", "attr(,\"blah\")", "     [,1]", "[1,]    1", "[2,]    2")
294s + )
294s [1] TRUE
294s > # Matrices that wrap
294s > 
294s > mx3 <- mx4 <- mx5 <- mx6 <- .mx.base
294s > old.opt <- options(width=30)
294s > 
294s > all.equal(
294s +   diffobj:::strip_matrix_rh(capture.output(mx3), dimnames(mx3)),
294s +   c("     [,1]                         ", "\"averylongwordthatcanlahblah\"", "\"causeasinglewidecolumnblah\" ", "\"matrixtowrapseveraltimes\"   ", "     [,2]            ", "\"inarrowscreen\" ", "\"onceuponatime\" ", "\"agreenduckflew\"", "     [,3]                ", "\"overthemountains\"  ", "\"inalongofantelopes\"", "\"ineedthreemore\"    ", "     [,4]              ", "\"entriesactually\" ", "\"nowonlytwomore\"  ", "\"iwaswrongearlier\"")
294s + )
294s [1] TRUE
294s > # Add rownames; should no longer strip
294s > 
294s > rownames(mx4) <- 2:4
294s > all.equal(
294s +   diffobj:::strip_matrix_rh(capture.output(mx4), dimnames(mx4)),
294s +   capture.output(mx4)
294s + )
294s [1] TRUE
294s > # Attributes don't have stuff stripped
294s > 
294s > attr(mx6, "blah") <- letters[1:15]
294s > 
294s > all.equal(
294s +   diffobj:::strip_matrix_rh(capture.output(mx6), dimnames(mx6)),
294s +   c("     [,1]                         ", "\"averylongwordthatcanlahblah\"", "\"causeasinglewidecolumnblah\" ", "\"matrixtowrapseveraltimes\"   ", "     [,2]            ", "\"inarrowscreen\" ", "\"onceuponatime\" ", "\"agreenduckflew\"", "     [,3]                ", "\"overthemountains\"  ", "\"inalongofantelopes\"", "\"ineedthreemore\"    ", "     [,4]              ", "\"entriesactually\" ", "\"nowonlytwomore\"  ", "\"iwaswrongearlier\"", "attr(,\"blah\")", " [1] \"a\" \"b\" \"c\" \"d\" \"e\" \"f\"", " [7] \"g\" \"h\" \"i\" \"j\" \"k\" \"l\"", "[13] \"m\" \"n\" \"o\"")
294s + )
294s [1] TRUE
294s > # Single row matrix
294s > 
294s > all.equal(
294s +   diffobj:::which_matrix_rh(capture.output(matrix(1:2, nrow=1)), NULL), 2
294s + )
294s [1] TRUE
294s > options(width=80)
294s > 
294s > # - Table ----------------------------------------------------------------------
294s > 
294s > old.opt <- options(width=30)
294s > 
294s > # Data frames
294s > 
294s > df1 <- as.data.frame(.mx.base)
294s > all.equal(
294s +   diffobj:::strip_table_rh(capture.output(df1)),
294s +   c("                           V1", "averylongwordthatcanlahblah", " causeasinglewidecolumnblah", "   matrixtowrapseveraltimes", "              V2", " inarrowscreen", " onceuponatime", "agreenduckflew", "                  V3", "  overthemountains", "inalongofantelopes", "    ineedthreemore", "                V4", " entriesactually", "  nowonlytwomore", "iwaswrongearlier")
294s + )
294s [1] TRUE
294s > df2 <- df1[c(2, 1, 3), ]
294s > 
294s > all.equal(
294s +   diffobj:::strip_table_rh(capture.output(df2)),
294s +   capture.output(df2)
294s + )
294s [1] TRUE
294s > # Rownames that start from one and sequential, should get stripped; also,
294s > # colon allowed
294s > 
294s > df3 <- df1
294s > rownames(df3) <- paste0(1:3, ":")
294s > all.equal(
294s +   diffobj:::strip_table_rh(capture.output(df3)),
294s +   c("                            V1", "averylongwordthatcanlahblah", " causeasinglewidecolumnblah", "   matrixtowrapseveraltimes", "               V2", " inarrowscreen", " onceuponatime", "agreenduckflew", "                   V3", "  overthemountains", "inalongofantelopes", "    ineedthreemore", "                 V4", " entriesactually", "  nowonlytwomore", "iwaswrongearlier")
294s + )
294s [1] TRUE
294s > # Try ts
294s > 
294s > all.equal(
294s +   diffobj:::strip_table_rh(capture.output(USAccDeaths)),
294s +   capture.output(USAccDeaths)
294s + )
294s [1] TRUE
294s > # Set it so first year is 1
294s > 
294s > USAD2 <- USAccDeaths
294s > tsp(USAD2)[1:2] <- tsp(USAD2)[1:2] - 1972
294s > 
294s > all.equal(
294s +   diffobj:::strip_table_rh(capture.output(USAD2)),
294s +   c("    Jan   Feb   Mar   Apr", " 9007  8106  8928  9137", " 7750  6981  8038  8422", " 8162  7306  8124  7870", " 7717  7461  7767  7925", " 7792  6957  7726  8106", " 7836  6892  7791  8192", "    May   Jun   Jul   Aug", "10017 10826 11317 10744", " 8714  9512 10120  9823", " 9387  9556 10093  9620", " 8623  8945 10078  9179", " 8890  9299 10625  9302", " 9115  9434 10484  9827", "    Sep   Oct   Nov   Dec", " 9713  9938  9161  8927", " 8743  9129  8710  8680", " 8285  8466  8160  8034", " 8037  8488  7874  8647", " 8314  8850  8265  8796", " 9110  9070  8633  9240")
294s + )
294s [1] TRUE
294s > # single row data frame
294s > 
294s > all.equal(c(diffobj:::which_table_rh(capture.output(data.frame(1, 2)))), 2)
294s [1] TRUE
294s > 
294s > # More than 10 rows data.frame
294s > 
294s > all.equal(
294s +   c(diffobj:::which_table_rh(capture.output(head(Puromycin, 10L)))),
294s +   2:11
294s + )
294s [1] TRUE
294s > # Bad wrap
294s > 
294s > bw <- c(
294s +   "    bad", "1   123", "2   456",
294s +   "    dab", "1   123", "2   456",
294s +   "    abd", "1   123")
294s > 
294s > all.equal(
294s +   diffobj:::wtr_help(bw, diffobj:::.pat.tbl),
294s +   c(2L, 3L, 5L, 6L)
294s + )
294s [1] TRUE
294s > 
294s > # - Array
294s > a <- array(1:6, c(3, 1, 2))
294s > a.c <- capture.output(a)
294s > all.equal(
294s +   diffobj:::strip_array_rh(a.c, dimnames(a)),
294s +   c(", , 1", "", "     [,1]", "   1", "   2", "   3", "", ", , 2", "", "     [,1]", "   4", "   5", "   6", "")
294s + )
294s [1] TRUE
294s > viz_sarh <- function(capt, obj)
294s +   cbind(
294s +     capt,
294s +     as.integer(
294s +       seq_along(capt) %in% diffobj:::which_array_rh(capt, dimnames(obj))
294s +     )
294s +   )
294s > a1 <- a2 <- a3 <- a4 <- array(
294s +   "averylongphrasethatwillforcemytwocolumnarraytowrapblahblah", c(2, 2, 2)
294s + )
294s > ca1 <- capture.output(a1)
294s > viz_sarh(ca1, a1)
294s       capt                                                                 
294s  [1,] ", , 1"                                                              
294s  [2,] ""                                                                   
294s  [3,] "     [,1]                                                        "  
294s  [4,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [5,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [6,] "     [,2]                                                        "  
294s  [7,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [8,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [9,] ""                                                                   
294s [10,] ", , 2"                                                              
294s [11,] ""                                                                   
294s [12,] "     [,1]                                                        "  
294s [13,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [14,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [15,] "     [,2]                                                        "  
294s [16,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [17,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [18,] ""                                                                   
294s          
294s  [1,] "0"
294s  [2,] "0"
294s  [3,] "0"
294s  [4,] "1"
294s  [5,] "1"
294s  [6,] "0"
294s  [7,] "1"
294s  [8,] "1"
294s  [9,] "0"
294s [10,] "0"
294s [11,] "0"
294s [12,] "0"
294s [13,] "1"
294s [14,] "1"
294s [15,] "0"
294s [16,] "1"
294s [17,] "1"
294s [18,] "0"
294s > all.equal(
294s +   diffobj:::which_array_rh(ca1, dimnames(a1)),
294s +   c(4L, 5L, 7L, 8L, 13L, 14L, 16L, 17L)
294s + )
294s [1] TRUE
294s > colnames(a2) <- c("ABC", "DEF")
294s > ca2 <- capture.output(a2)
294s > viz_sarh(ca2, a2)
294s       capt                                                                 
294s  [1,] ", , 1"                                                              
294s  [2,] ""                                                                   
294s  [3,] "     ABC                                                         "  
294s  [4,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [5,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [6,] "     DEF                                                         "  
294s  [7,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [8,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [9,] ""                                                                   
294s [10,] ", , 2"                                                              
294s [11,] ""                                                                   
294s [12,] "     ABC                                                         "  
294s [13,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [14,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [15,] "     DEF                                                         "  
294s [16,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [17,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [18,] ""                                                                   
294s          
294s  [1,] "0"
294s  [2,] "0"
294s  [3,] "0"
294s  [4,] "1"
294s  [5,] "1"
294s  [6,] "0"
294s  [7,] "1"
294s  [8,] "1"
294s  [9,] "0"
294s [10,] "0"
294s [11,] "0"
294s [12,] "0"
294s [13,] "1"
294s [14,] "1"
294s [15,] "0"
294s [16,] "1"
294s [17,] "1"
294s [18,] "0"
294s > all.equal(
294s +   diffobj:::which_array_rh(ca2, dimnames(a2)),
294s +   c(4L, 5L, 7L, 8L, 13L, 14L, 16L, 17L)
294s + )
294s [1] TRUE
294s > rownames(a3) <- 1:2
294s > ca3 <- capture.output(a3)
294s > viz_sarh(ca3, a3)
294s       capt                                                              
294s  [1,] ", , 1"                                                           
294s  [2,] ""                                                                
294s  [3,] "  [,1]                                                        "  
294s  [4,] "1 \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [5,] "2 \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [6,] "  [,2]                                                        "  
294s  [7,] "1 \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [8,] "2 \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [9,] ""                                                                
294s [10,] ", , 2"                                                           
294s [11,] ""                                                                
294s [12,] "  [,1]                                                        "  
294s [13,] "1 \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [14,] "2 \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [15,] "  [,2]                                                        "  
294s [16,] "1 \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [17,] "2 \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [18,] ""                                                                
294s          
294s  [1,] "0"
294s  [2,] "0"
294s  [3,] "0"
294s  [4,] "0"
294s  [5,] "0"
294s  [6,] "0"
294s  [7,] "0"
294s  [8,] "0"
294s  [9,] "0"
294s [10,] "0"
294s [11,] "0"
294s [12,] "0"
294s [13,] "0"
294s [14,] "0"
294s [15,] "0"
294s [16,] "0"
294s [17,] "0"
294s [18,] "0"
294s > all.equal(diffobj:::which_array_rh(ca3, dimnames(a3)), integer(0L))
294s [1] TRUE
294s > 
294s > attr(a4, "blahblah") <- matrix(1:4, 2)
294s > ca4 <- capture.output(a4)
294s > viz_sarh(ca4, a4)
294s       capt                                                                 
294s  [1,] ", , 1"                                                              
294s  [2,] ""                                                                   
294s  [3,] "     [,1]                                                        "  
294s  [4,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [5,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [6,] "     [,2]                                                        "  
294s  [7,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [8,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s  [9,] ""                                                                   
294s [10,] ", , 2"                                                              
294s [11,] ""                                                                   
294s [12,] "     [,1]                                                        "  
294s [13,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [14,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [15,] "     [,2]                                                        "  
294s [16,] "[1,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [17,] "[2,] \"averylongphrasethatwillforcemytwocolumnarraytowrapblahblah\""
294s [18,] ""                                                                   
294s [19,] "attr(,\"blahblah\")"                                                
294s [20,] "     [,1] [,2]"                                                     
294s [21,] "[1,]    1    3"                                                     
294s [22,] "[2,]    2    4"                                                     
294s          
294s  [1,] "0"
294s  [2,] "0"
294s  [3,] "0"
294s  [4,] "1"
294s  [5,] "1"
294s  [6,] "0"
294s  [7,] "1"
294s  [8,] "1"
294s  [9,] "0"
294s [10,] "0"
294s [11,] "0"
294s [12,] "0"
294s [13,] "1"
294s [14,] "1"
294s [15,] "0"
294s [16,] "1"
294s [17,] "1"
294s [18,] "0"
294s [19,] "0"
294s [20,] "0"
294s [21,] "0"
294s [22,] "0"
294s > all.equal(
294s +   diffobj:::which_array_rh(ca4, dimnames(a4)),
294s +   c(4L, 5L, 7L, 8L, 13L, 14L, 16L, 17L)
294s + )
294s [1] TRUE
294s > options(width=80)
294s > 
294s > # - List -----------------------------------------------------------------------
294s > 
294s > l1 <- list(
294s +   matrix(1:4, 2), b=list(abc=c(letters, LETTERS), list(matrix(4:1, 2)))
294s + )
294s > l1.c <- capture.output(l1)
294s > all.equal(
294s +   diffobj:::strip_list_rh(l1.c, l1),
294s +   c("[[1]]", "     [,1] [,2]", "   1    3", "   2    4", "", "$b", "$b$abc", "\"a\" \"b\" \"c\" \"d\" \"e\" \"f\" \"g\" \"h\" \"i\" \"j\" \"k\" \"l\" \"m\" \"n\" \"o\" \"p\" \"q\" \"r\" \"s\"", "\"t\" \"u\" \"v\" \"w\" \"x\" \"y\" \"z\" \"A\" \"B\" \"C\" \"D\" \"E\" \"F\" \"G\" \"H\" \"I\" \"J\" \"K\" \"L\"", "\"M\" \"N\" \"O\" \"P\" \"Q\" \"R\" \"S\" \"T\" \"U\" \"V\" \"W\" \"X\" \"Y\" \"Z\"", "", "$b[[2]]", "$b[[2]][[1]]", "     [,1] [,2]", "   4    2", "   3    1", "", "", "")
294s + )
294s [1] TRUE
294s > 
294s > a <- list(list())
294s > aa <- list(list(), "a")
294s > b <- list("a", list())
294s > c <- list(list("a"), "b")
294s > d <- list("a", "b", "c")
294s > 
294s > identical(
294s +   diffobj:::strip_list_rh(capture.output(d), d),
294s +   c("[[1]]", "\"a\"", "", "[[2]]", "\"b\"", "", "[[3]]", "\"c\"", "")
294s + )
294s [1] TRUE
294s > identical(
294s +   diffobj:::strip_list_rh(capture.output(a), a),
294s +   c("[[1]]", "list()", "")
294s + )
294s [1] TRUE
294s > identical(
294s +   diffobj:::strip_list_rh(capture.output(aa), aa),
294s +   c("[[1]]", "list()", "", "[[2]]", "\"a\"", "")
294s + )
294s [1] TRUE
294s > identical(
294s +   diffobj:::strip_list_rh(capture.output(b), b),
294s +   c("[[1]]", "\"a\"", "", "[[2]]", "list()", "")
294s + )
294s [1] TRUE
294s > identical(
294s +   diffobj:::strip_list_rh(capture.output(c), c),
294s +   c("[[1]]", "[[1]][[1]]", "\"a\"", "", "", "[[2]]", "\"b\"", "")
294s + )
294s [1] TRUE
294s > 
294s > # - custom trim fun ------------------------------------------------------------
294s > 
294s > a <- matrix(100:102)
294s > b <- matrix(101:103)
294s > fun1 <- function(x, y) cbind(rep(1L, 4), rep(5L, 4))
294s > 
294s > all.equal(as.character(diffPrint(a, b, trim=fun1)), rdsf(100))
294s [1] TRUE
294s > if(getRversion() >= "3.2.2") {
294s +   capture.output(
294s +     trim.err <- as.character(diffPrint(a, b, trim=function(x, y) stop("boom"))),
294s +     type="message"
294s +   ) # warn: "If you did not specify a `trim`"
294s +   all.equal(trim.err, rdsf(200))
294s + }
294s [1] TRUE
294s Warning message:
294s In apply_trim(current, cur.capt.p, etc@trim) :
294s   `trim*` method produced an error when attempting to trim ; If you did not specify a `trim` function or define custom `trim*` methods contact maintainer (see `?trim`).  Proceeding without trimming.
294s > # purposefully bad trim fun
294s > 
294s > try( # "method return value must be a two "
294s +   diffPrint(1:100, 2:100, trim=function(x, y) TRUE)
294s + )
294s Error in apply_trim(target, tar.capt.p, etc@trim) : 
294s   `trim*` method return value must be a two column integer matrix with no NAs; If you did not specify a `trim` function or define custom `trim*` methods contact maintainer (see `?trim`).  Proceeding without trimming.
294s > try( # "Invalid trim function" 
294s +   diffobj:::apply_trim(letters, letters, function(x) TRUE),
294s + )
294s Error in diffobj:::apply_trim(letters, letters, function(x) TRUE) : 
294s   Invalid trim function (does not have at least two arguments).  If you did not customize the trim function contact maintainer; see `?trim`
294s > try(#  "must have as many rows"
294s +   diffobj:::apply_trim(
294s +     letters, letters, function(x, y) cbind(1:25, 1:25)
294s +   )
294s + )
294s Error in diffobj:::apply_trim(letters, letters, function(x, y) cbind(1:25,  : 
294s   `trim*` method output matrix must have as many rows as object character representation has elements; If you did not specify a `trim` function or define custom `trim*` methods contact maintainer (see `?trim`).  Proceeding without trimming.
294s > 
294s > # - s4 -------------------------------------------------------------------------
294s > 
294s > setClass("DOTrimTest", slots=c(a="numeric", b="list", c="matrix"))
294s > obj <- new(
294s +   "DOTrimTest", a=1:40, b=list(a=1, letters, NULL), c=matrix(1:9, 3)
294s + )
294s > all.equal(
294s +   diffobj:::strip_s4_rh(capture.output(obj), obj), rdsf(300)
294s + )
294s [1] TRUE
294s > 
294s > 
294s PASS
294s Begin testing test-warnings.R
294s 
294s R version 4.4.3 (2025-02-28) -- "Trophy Case"
294s Copyright (C) 2025 The R Foundation for Statistical Computing
294s Platform: aarch64-unknown-linux-gnu
294s 
294s R is free software and comes with ABSOLUTELY NO WARRANTY.
294s You are welcome to redistribute it under certain conditions.
294s Type 'license()' or 'licence()' for distribution details.
294s 
294s R is a collaborative project with many contributors.
294s Type 'contributors()' for more information and
294s 'citation()' on how to cite R or R packages in publications.
294s 
294s Type 'demo()' for some demos, 'help()' for on-line help, or
294s 'help.start()' for an HTML browser interface to help.
294s Type 'q()' to quit R.
294s 
295s > NAME <- "warnings"
295s > source(file.path('_helper', 'init.R'))
295s > 
295s > # tests designed to produce warnings
295s > 
295s > # - Extra args for `str` -------------------------------------------------------
295s > 
295s > a <- "hello"
295s > b <- "goodbye"
295s > 
295s > invisible(diffStr(a, b, extra=list(comp.str="^"))) # "Specifying"
295s Warning message:
295s In capt_fun(target, current, etc = etc.proc, err = err, extra) :
295s   Specifying `comp.str` may cause `str` output level folding to be incorrect
295s > invisible(diffStr(a, b, extra=list(comp="^"))) #  "Specifying")
295s Warning messages:
295s 1: In match.call(definition, call, expand.dots, envir) :
295s   partial argument match of 'comp' to 'comp.str'
295s 2: In capt_fun(target, current, etc = etc.proc, err = err, extra) :
295s   Specifying `comp.str` may cause `str` output level folding to be incorrect
295s > invisible(diffStr(a, b, extra=list(indent.str="..."))) #  "Specifying"
295s Warning message:
295s In capt_fun(target, current, etc = etc.proc, err = err, extra) :
295s   Specifying `indent.str` may cause `str` output level folding to be incorrect
295s > invisible(diffStr(a, b, extra=list(indent="..."))) # "Specifying"
295s Warning messages:
295s 1: In match.call(definition, call, expand.dots, envir) :
295s   partial argument match of 'indent' to 'indent.str'
295s 2: In capt_fun(target, current, etc = etc.proc, err = err, extra) :
295s   Specifying `indent.str` may cause `str` output level folding to be incorrect
295s > 
295s > # - Max diffs ------------------------------------------------------------------
295s > 
295s > # Max limit warnings work properly; these are not fully fleshed out
295s > 
295s > A3 <- c("a b c", "d e f A B C D", "g h i", "f")
295s > B3 <- c("a b c", "xd e f E Q L S", "g h i", "q")
295s > 
295s > invisible(diffChr(A3, B3, max.diffs=2)) # warn: "Exceeded diff"
295s Warning message:
295s Exceeded diff limit during diff computation (6 vs. 2 allowed); overall diff is likely not optimal 
295s > 
295s > # - Overriden formals ----------------------------------------------------------
295s > 
295s > # warn "Provided `style` argument will override the provided `format` argument"
295s > invisible(diffChr(letters, LETTERS, style=StyleRaw(), format="ansi8"))
295s Warning message:
295s In diffChr(target = letters, current = LETTERS, style = StyleRaw(),  :
295s   Provided `style` argument will override the provided `format` argument
295s > 
295s > # warn: "Provided `style` .* `format` and `color.mode` arguments"
295s > invisible(
295s +   diffChr(letters, LETTERS, style=StyleRaw(), format="ansi8", color.mode="rgb")
295s + )
295s Warning message:
295s In diffChr(target = letters, current = LETTERS, style = StyleRaw(),  :
295s   Provided `style` argument will override the provided `format` and `color.mode` arguments.
295s > 
295s > 
295s PASS
295s autopkgtest [15:28:38]: test run-unit-test: -----------------------]
296s run-unit-test        PASS
296s autopkgtest [15:28:39]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
296s autopkgtest [15:28:39]: test pkg-r-autopkgtest: preparing testbed
476s autopkgtest [15:31:39]: testbed dpkg architecture: arm64
477s autopkgtest [15:31:40]: testbed apt version: 2.9.33
477s autopkgtest [15:31:40]: @@@@@@@@@@@@@@@@@@@@ test bed setup
477s autopkgtest [15:31:40]: testbed release detected to be: plucky
478s autopkgtest [15:31:41]: updating testbed package index (apt update)
479s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
479s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
479s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
479s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
479s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
479s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB]
480s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB]
480s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [78.2 kB]
480s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1976 B]
480s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B]
480s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [346 kB]
480s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [15.8 kB]
480s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B]
480s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [572 B]
481s Fetched 1094 kB in 2s (590 kB/s)
482s Reading package lists...
482s + lsb_release --codename --short
482s + RELEASE=plucky
482s + cat
482s + [ plucky != trusty ]
482s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade
482s Reading package lists...
483s Building dependency tree...
483s Reading state information...
483s Calculating upgrade...
484s Calculating upgrade...
484s The following packages will be upgraded:
484s   python3-jinja2 strace
484s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
484s Need to get 608 kB of archives.
484s After this operation, 11.3 kB of additional disk space will be used.
484s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB]
485s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
486s Fetched 608 kB in 1s (640 kB/s)
486s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 117701 files and directories currently installed.)
486s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ...
486s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
486s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
486s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
486s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
487s Setting up strace (6.13+ds-1ubuntu1) ...
487s Processing triggers for man-db (2.13.0-1) ...
488s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref
488s + /usr/lib/apt/apt-helper analyze-pattern ?true
488s + uname -r
488s + sed s/\./\\./g
488s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.*
488s + + tail -n+2
488s apt list ?obsolete
488s + cut -d/ -f1
488s + grep -v ^linux-.*6\.14\.0-10-generic.*
488s + obsolete_pkgs=linux-headers-6.11.0-8-generic
488s linux-headers-6.11.0-8
488s linux-image-6.11.0-8-generic
488s linux-modules-6.11.0-8-generic
488s linux-tools-6.11.0-8-generic
488s linux-tools-6.11.0-8
488s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8
488s Reading package lists...
489s Building dependency tree...
489s Reading state information...
490s Solving dependencies...
491s The following packages will be REMOVED:
491s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
491s   libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
491s   linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic*
491s   linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic*
492s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded.
492s After this operation, 267 MB disk space will be freed.
492s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 117701 files and directories currently installed.)
492s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
492s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
492s Removing libpython3.12t64:arm64 (3.12.9-1) ...
492s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ...
492s Removing libnsl2:arm64 (1.3.0-3build3) ...
492s Removing libpython3.12-minimal:arm64 (3.12.9-1) ...
492s Removing libunwind8:arm64 (1.6.2-3.1) ...
492s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
493s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
495s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ...
495s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic
495s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic
495s /etc/kernel/postrm.d/initramfs-tools:
495s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic
495s /etc/kernel/postrm.d/zz-flash-kernel:
495s flash-kernel: Kernel 6.11.0-8-generic has been removed.
495s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required.
496s /etc/kernel/postrm.d/zz-update-grub:
496s Sourcing file `/etc/default/grub'
496s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
496s Generating grub configuration file ...
496s Found linux image: /boot/vmlinuz-6.14.0-10-generic
496s Found initrd image: /boot/initrd.img-6.14.0-10-generic
496s Warning: os-prober will not be executed to detect other bootable partitions.
496s Systems on them will not be added to the GRUB boot configuration.
496s Check GRUB_DISABLE_OS_PROBER documentation entry.
496s Adding boot menu entry for UEFI Firmware Settings ...
496s done
496s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
497s Processing triggers for libc-bin (2.41-1ubuntu1) ...
497s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 81650 files and directories currently installed.)
497s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ...
497s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ...
497s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
497s + grep -q trusty /etc/lsb-release
497s + [ ! -d /usr/share/doc/unattended-upgrades ]
497s + [ ! -d /usr/share/doc/lxd ]
497s + [ ! -d /usr/share/doc/lxd-client ]
497s + [ ! -d /usr/share/doc/snapd ]
497s + type iptables
497s + cat
497s + chmod 755 /etc/rc.local
497s + . /etc/rc.local
497s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu
497s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP
497s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP
497s + uname -m
497s + [ aarch64 = ppc64le ]
497s + [ -d /run/systemd/system ]
497s + systemd-detect-virt --quiet --vm
497s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/
497s + cat
497s + grep -q lz4 /etc/initramfs-tools/initramfs.conf
497s + echo COMPRESS=lz4
497s autopkgtest [15:32:00]: upgrading testbed (apt dist-upgrade and autopurge)
498s Reading package lists...
498s Building dependency tree...
498s Reading state information...
499s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
499s Starting 2 pkgProblemResolver with broken count: 0
499s Done
500s Entering ResolveByKeep
500s 
500s Calculating upgrade...
501s The following packages will be upgraded:
501s   libc-bin libc-dev-bin libc6 libc6-dev locales
501s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
501s Need to get 9530 kB of archives.
501s After this operation, 0 B of additional disk space will be used.
501s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB]
503s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB]
503s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB]
506s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB]
507s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB]
512s Preconfiguring packages ...
512s Fetched 9530 kB in 11s (869 kB/s)
513s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 81647 files and directories currently installed.)
513s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ...
513s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
513s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ...
513s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
513s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ...
513s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
513s Setting up libc6:arm64 (2.41-1ubuntu2) ...
513s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 81647 files and directories currently installed.)
513s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ...
513s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
513s Setting up libc-bin (2.41-1ubuntu2) ...
514s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 81647 files and directories currently installed.)
514s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
514s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
514s Setting up locales (2.41-1ubuntu2) ...
515s Generating locales (this might take a while)...
517s   en_US.UTF-8... done
517s Generation complete.
517s Setting up libc-dev-bin (2.41-1ubuntu2) ...
517s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ...
517s Processing triggers for man-db (2.13.0-1) ...
518s Processing triggers for systemd (257.3-1ubuntu3) ...
519s Reading package lists...
519s Building dependency tree...
519s Reading state information...
519s Starting pkgProblemResolver with broken count: 0
520s Starting 2 pkgProblemResolver with broken count: 0
520s Done
520s Solving dependencies...
521s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
521s autopkgtest [15:32:24]: rebooting testbed after setup commands that affected boot
549s Reading package lists...
550s Building dependency tree...
550s Reading state information...
550s Starting pkgProblemResolver with broken count: 0
550s Starting 2 pkgProblemResolver with broken count: 0
550s Done
551s The following NEW packages will be installed:
551s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
551s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
551s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14
551s   g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
551s   gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14
551s   gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools
551s   javascript-common libasan8 libblas-dev libblas3 libbz2-dev libcairo2
551s   libcc1-0 libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 libgcc-14-dev
551s   libgfortran-14-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b
551s   libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev
551s   libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap
551s   libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
551s   libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
551s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
551s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
551s   liblapack-dev liblapack3 liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3
551s   libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
551s   libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
551s   libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libreadline-dev
551s   libsharpyuv0 libsm6 libstdc++-14-dev libtcl8.6 libthai-data libthai0
551s   libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0
551s   libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler
551s   node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data
551s   pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev
551s   r-cran-base64enc r-cran-bslib r-cran-cachem r-cran-cli r-cran-commonmark
551s   r-cran-crayon r-cran-diffobj r-cran-digest r-cran-evaluate r-cran-fastmap
551s   r-cran-fontawesome r-cran-fs r-cran-glue r-cran-highr r-cran-htmltools
551s   r-cran-httpuv r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-later
551s   r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-memoise r-cran-mime
551s   r-cran-pkgkitten r-cran-promises r-cran-r6 r-cran-rappdirs r-cran-rcpp
551s   r-cran-rlang r-cran-rmarkdown r-cran-sass r-cran-shiny r-cran-sourcetools
551s   r-cran-tinytex r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml unzip
551s   x11-common xdg-utils zip zlib1g-dev
551s 0 upgraded, 166 newly installed, 0 to remove and 0 not upgraded.
551s Need to get 194 MB of archives.
551s After this operation, 749 MB of additional disk space will be used.
551s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
552s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
552s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB]
564s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B]
564s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B]
564s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB]
564s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB]
564s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB]
564s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB]
564s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB]
568s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB]
569s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB]
572s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB]
573s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB]
575s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB]
578s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB]
601s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB]
602s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B]
602s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B]
602s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB]
605s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB]
618s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB]
618s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B]
618s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B]
618s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
618s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB]
618s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
619s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
620s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB]
620s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB]
620s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB]
621s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
621s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
621s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
624s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB]
624s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB]
625s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB]
638s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB]
638s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B]
638s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B]
638s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB]
639s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 12 [5216 B]
639s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB]
639s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB]
639s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB]
639s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
639s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
639s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
639s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
639s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
640s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
640s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB]
640s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB]
640s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
640s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB]
641s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
641s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
641s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB]
655s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
655s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB]
655s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
655s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
655s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
655s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
655s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
655s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB]
656s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB]
656s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
656s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
657s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
657s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
657s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
657s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
657s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
657s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
657s Get:76 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
657s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
657s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB]
660s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB]
665s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
665s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB]
665s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB]
666s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
666s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
666s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB]
666s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB]
666s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB]
666s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB]
666s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB]
666s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB]
667s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB]
667s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B]
667s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB]
668s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB]
668s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
669s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB]
669s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB]
669s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB]
669s Get:99 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
669s Get:100 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB]
671s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
671s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB]
671s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
671s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
671s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
671s Get:106 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB]
672s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
672s Get:108 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB]
673s Get:109 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
673s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
673s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB]
704s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB]
704s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B]
704s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB]
704s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
704s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB]
704s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
704s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB]
740s Get:119 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB]
740s Get:120 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB]
740s Get:121 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB]
740s Get:122 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB]
740s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B]
740s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
740s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB]
740s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB]
742s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB]
743s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB]
743s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB]
743s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB]
743s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
743s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB]
744s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB]
745s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB]
746s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
746s Get:136 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB]
746s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB]
746s Get:138 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB]
746s Get:139 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB]
746s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB]
746s Get:141 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB]
747s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB]
752s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB]
752s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB]
753s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB]
754s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB]
754s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
755s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.51+dfsg-1 [573 kB]
756s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
756s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
756s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB]
758s Get:152 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB]
758s Get:153 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
759s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB]
759s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB]
760s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB]
760s Get:157 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
767s Get:158 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.49+dfsg-1 [859 kB]
769s Get:159 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.56-1 [148 kB]
769s Get:160 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB]
769s Get:161 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB]
770s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB]
770s Get:163 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
770s Get:164 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
770s Get:165 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
775s Get:166 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB]
778s Preconfiguring packages ...
778s Fetched 194 MB in 3min 46s (857 kB/s)
778s Selecting previously unselected package libisl23:arm64.
778s (Reading database ... (Reading database ... 5%(Reading database ... 10%(Reading database ... 15%(Reading database ... 20%(Reading database ... 25%(Reading database ... 30%(Reading database ... 35%(Reading database ... 40%(Reading database ... 45%(Reading database ... 50%(Reading database ... 55%(Reading database ... 60%(Reading database ... 65%(Reading database ... 70%(Reading database ... 75%(Reading database ... 80%(Reading database ... 85%(Reading database ... 90%(Reading database ... 95%(Reading database ... 100%(Reading database ... 81647 files and directories currently installed.)
778s Preparing to unpack .../000-libisl23_0.27-1_arm64.deb ...
778s Unpacking libisl23:arm64 (0.27-1) ...
778s Selecting previously unselected package libmpc3:arm64.
778s Preparing to unpack .../001-libmpc3_1.3.1-1build2_arm64.deb ...
778s Unpacking libmpc3:arm64 (1.3.1-1build2) ...
778s Selecting previously unselected package cpp-14-aarch64-linux-gnu.
778s Preparing to unpack .../002-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
778s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
779s Selecting previously unselected package cpp-14.
779s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_arm64.deb ...
779s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
779s Selecting previously unselected package cpp-aarch64-linux-gnu.
779s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
779s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
779s Selecting previously unselected package cpp.
779s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ...
779s Unpacking cpp (4:14.2.0-1ubuntu1) ...
779s Selecting previously unselected package libcc1-0:arm64.
779s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_arm64.deb ...
779s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ...
779s Selecting previously unselected package libgomp1:arm64.
779s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_arm64.deb ...
779s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ...
779s Selecting previously unselected package libitm1:arm64.
779s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_arm64.deb ...
779s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ...
779s Selecting previously unselected package libasan8:arm64.
779s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_arm64.deb ...
779s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ...
779s Selecting previously unselected package liblsan0:arm64.
779s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_arm64.deb ...
779s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ...
779s Selecting previously unselected package libtsan2:arm64.
779s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_arm64.deb ...
779s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ...
779s Selecting previously unselected package libubsan1:arm64.
779s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_arm64.deb ...
779s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ...
779s Selecting previously unselected package libhwasan0:arm64.
779s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_arm64.deb ...
779s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ...
779s Selecting previously unselected package libgcc-14-dev:arm64.
779s Preparing to unpack .../014-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ...
779s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ...
779s Selecting previously unselected package gcc-14-aarch64-linux-gnu.
779s Preparing to unpack .../015-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
779s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
780s Selecting previously unselected package gcc-14.
780s Preparing to unpack .../016-gcc-14_14.2.0-17ubuntu3_arm64.deb ...
780s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
780s Selecting previously unselected package gcc-aarch64-linux-gnu.
780s Preparing to unpack .../017-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
780s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
780s Selecting previously unselected package gcc.
780s Preparing to unpack .../018-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ...
780s Unpacking gcc (4:14.2.0-1ubuntu1) ...
780s Selecting previously unselected package libstdc++-14-dev:arm64.
780s Preparing to unpack .../019-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ...
780s Unpacking libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ...
780s Selecting previously unselected package g++-14-aarch64-linux-gnu.
780s Preparing to unpack .../020-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
780s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
780s Selecting previously unselected package g++-14.
780s Preparing to unpack .../021-g++-14_14.2.0-17ubuntu3_arm64.deb ...
780s Unpacking g++-14 (14.2.0-17ubuntu3) ...
780s Selecting previously unselected package g++-aarch64-linux-gnu.
780s Preparing to unpack .../022-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
780s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
780s Selecting previously unselected package g++.
780s Preparing to unpack .../023-g++_4%3a14.2.0-1ubuntu1_arm64.deb ...
780s Unpacking g++ (4:14.2.0-1ubuntu1) ...
780s Selecting previously unselected package build-essential.
780s Preparing to unpack .../024-build-essential_12.10ubuntu1_arm64.deb ...
780s Unpacking build-essential (12.10ubuntu1) ...
780s Selecting previously unselected package dctrl-tools.
780s Preparing to unpack .../025-dctrl-tools_2.24-3build3_arm64.deb ...
780s Unpacking dctrl-tools (2.24-3build3) ...
780s Selecting previously unselected package fonts-dejavu-mono.
780s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ...
780s Unpacking fonts-dejavu-mono (2.37-8) ...
781s Selecting previously unselected package fonts-dejavu-core.
781s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ...
781s Unpacking fonts-dejavu-core (2.37-8) ...
781s Selecting previously unselected package fontconfig-config.
781s Preparing to unpack .../028-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ...
781s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
781s Selecting previously unselected package libfontconfig1:arm64.
781s Preparing to unpack .../029-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ...
781s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ...
781s Selecting previously unselected package fontconfig.
781s Preparing to unpack .../030-fontconfig_2.15.0-2ubuntu1_arm64.deb ...
781s Unpacking fontconfig (2.15.0-2ubuntu1) ...
781s Selecting previously unselected package fonts-font-awesome.
781s Preparing to unpack .../031-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
781s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
781s Selecting previously unselected package fonts-glyphicons-halflings.
781s Preparing to unpack .../032-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
781s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
781s Selecting previously unselected package fonts-mathjax.
781s Preparing to unpack .../033-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
781s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
781s Selecting previously unselected package libgfortran5:arm64.
781s Preparing to unpack .../034-libgfortran5_15-20250222-0ubuntu1_arm64.deb ...
781s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ...
781s Selecting previously unselected package libgfortran-14-dev:arm64.
781s Preparing to unpack .../035-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ...
781s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ...
781s Selecting previously unselected package gfortran-14-aarch64-linux-gnu.
781s Preparing to unpack .../036-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ...
781s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
782s Selecting previously unselected package gfortran-14.
782s Preparing to unpack .../037-gfortran-14_14.2.0-17ubuntu3_arm64.deb ...
782s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
782s Selecting previously unselected package gfortran-aarch64-linux-gnu.
782s Preparing to unpack .../038-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
782s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
782s Selecting previously unselected package gfortran.
782s Preparing to unpack .../039-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ...
782s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
782s Selecting previously unselected package icu-devtools.
782s Preparing to unpack .../040-icu-devtools_76.1-1ubuntu2_arm64.deb ...
782s Unpacking icu-devtools (76.1-1ubuntu2) ...
782s Selecting previously unselected package javascript-common.
782s Preparing to unpack .../041-javascript-common_12_all.deb ...
782s Unpacking javascript-common (12) ...
782s Selecting previously unselected package libblas3:arm64.
782s Preparing to unpack .../042-libblas3_3.12.1-2_arm64.deb ...
782s Unpacking libblas3:arm64 (3.12.1-2) ...
782s Selecting previously unselected package libblas-dev:arm64.
782s Preparing to unpack .../043-libblas-dev_3.12.1-2_arm64.deb ...
782s Unpacking libblas-dev:arm64 (3.12.1-2) ...
782s Selecting previously unselected package libbz2-dev:arm64.
782s Preparing to unpack .../044-libbz2-dev_1.0.8-6_arm64.deb ...
782s Unpacking libbz2-dev:arm64 (1.0.8-6) ...
782s Selecting previously unselected package libpixman-1-0:arm64.
782s Preparing to unpack .../045-libpixman-1-0_0.44.0-3_arm64.deb ...
782s Unpacking libpixman-1-0:arm64 (0.44.0-3) ...
782s Selecting previously unselected package libxcb-render0:arm64.
782s Preparing to unpack .../046-libxcb-render0_1.17.0-2_arm64.deb ...
782s Unpacking libxcb-render0:arm64 (1.17.0-2) ...
782s Selecting previously unselected package libxcb-shm0:arm64.
782s Preparing to unpack .../047-libxcb-shm0_1.17.0-2_arm64.deb ...
782s Unpacking libxcb-shm0:arm64 (1.17.0-2) ...
782s Selecting previously unselected package libxrender1:arm64.
782s Preparing to unpack .../048-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ...
782s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ...
782s Selecting previously unselected package libcairo2:arm64.
782s Preparing to unpack .../049-libcairo2_1.18.2-2_arm64.deb ...
782s Unpacking libcairo2:arm64 (1.18.2-2) ...
782s Selecting previously unselected package libdatrie1:arm64.
782s Preparing to unpack .../050-libdatrie1_0.2.13-3build1_arm64.deb ...
782s Unpacking libdatrie1:arm64 (0.2.13-3build1) ...
782s Selecting previously unselected package libdeflate0:arm64.
782s Preparing to unpack .../051-libdeflate0_1.23-1_arm64.deb ...
782s Unpacking libdeflate0:arm64 (1.23-1) ...
782s Selecting previously unselected package libdeflate-dev:arm64.
782s Preparing to unpack .../052-libdeflate-dev_1.23-1_arm64.deb ...
782s Unpacking libdeflate-dev:arm64 (1.23-1) ...
782s Selecting previously unselected package libgraphite2-3:arm64.
782s Preparing to unpack .../053-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ...
782s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
782s Selecting previously unselected package libharfbuzz0b:arm64.
782s Preparing to unpack .../054-libharfbuzz0b_10.2.0-1_arm64.deb ...
782s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ...
782s Selecting previously unselected package x11-common.
782s Preparing to unpack .../055-x11-common_1%3a7.7+23ubuntu3_all.deb ...
782s Unpacking x11-common (1:7.7+23ubuntu3) ...
782s Selecting previously unselected package libice6:arm64.
782s Preparing to unpack .../056-libice6_2%3a1.1.1-1_arm64.deb ...
782s Unpacking libice6:arm64 (2:1.1.1-1) ...
782s Selecting previously unselected package libicu-dev:arm64.
782s Preparing to unpack .../057-libicu-dev_76.1-1ubuntu2_arm64.deb ...
782s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ...
783s Selecting previously unselected package libjpeg-turbo8:arm64.
783s Preparing to unpack .../058-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ...
783s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
783s Selecting previously unselected package libjpeg-turbo8-dev:arm64.
783s Preparing to unpack .../059-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ...
783s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ...
783s Selecting previously unselected package libjpeg8:arm64.
783s Preparing to unpack .../060-libjpeg8_8c-2ubuntu11_arm64.deb ...
783s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
783s Selecting previously unselected package libjpeg8-dev:arm64.
783s Preparing to unpack .../061-libjpeg8-dev_8c-2ubuntu11_arm64.deb ...
783s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ...
783s Selecting previously unselected package libjpeg-dev:arm64.
783s Preparing to unpack .../062-libjpeg-dev_8c-2ubuntu11_arm64.deb ...
783s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ...
783s Selecting previously unselected package libjs-bootstrap.
783s Preparing to unpack .../063-libjs-bootstrap_3.4.1+dfsg-3_all.deb ...
783s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
783s Selecting previously unselected package libjs-popper.js.
783s Preparing to unpack .../064-libjs-popper.js_1.16.1+ds-6_all.deb ...
783s Unpacking libjs-popper.js (1.16.1+ds-6) ...
783s Selecting previously unselected package libjs-bootstrap4.
783s Preparing to unpack .../065-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ...
783s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ...
783s Selecting previously unselected package libjs-d3.
783s Preparing to unpack .../066-libjs-d3_3.5.17-4_all.deb ...
783s Unpacking libjs-d3 (3.5.17-4) ...
783s Selecting previously unselected package libjs-es5-shim.
783s Preparing to unpack .../067-libjs-es5-shim_4.6.7-2_all.deb ...
783s Unpacking libjs-es5-shim (4.6.7-2) ...
783s Selecting previously unselected package libjs-highlight.js.
783s Preparing to unpack .../068-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ...
783s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ...
783s Selecting previously unselected package libjs-jquery.
783s Preparing to unpack .../069-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
783s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
783s Selecting previously unselected package libjs-jquery-datatables.
783s Preparing to unpack .../070-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ...
783s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ...
783s Selecting previously unselected package libjs-sifter.js.
783s Preparing to unpack .../071-libjs-sifter.js_0.6.0+dfsg-3_all.deb ...
783s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ...
783s Selecting previously unselected package libjs-microplugin.js.
783s Preparing to unpack .../072-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ...
783s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ...
783s Selecting previously unselected package libjs-jquery-selectize.js.
783s Preparing to unpack .../073-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ...
783s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
784s Selecting previously unselected package libjs-jquery-ui.
784s Preparing to unpack .../074-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
784s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
784s Selecting previously unselected package libjs-json.
784s Preparing to unpack .../075-libjs-json_0~20221030+~1.0.8-1_all.deb ...
784s Unpacking libjs-json (0~20221030+~1.0.8-1) ...
784s Selecting previously unselected package libjs-prettify.
784s Preparing to unpack .../076-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ...
784s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ...
784s Selecting previously unselected package liblapack3:arm64.
784s Preparing to unpack .../077-liblapack3_3.12.1-2_arm64.deb ...
784s Unpacking liblapack3:arm64 (3.12.1-2) ...
784s Selecting previously unselected package liblapack-dev:arm64.
784s Preparing to unpack .../078-liblapack-dev_3.12.1-2_arm64.deb ...
784s Unpacking liblapack-dev:arm64 (3.12.1-2) ...
784s Selecting previously unselected package liblerc4:arm64.
784s Preparing to unpack .../079-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ...
784s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
784s Selecting previously unselected package liblua5.4-0:arm64.
784s Preparing to unpack .../080-liblua5.4-0_5.4.7-1_arm64.deb ...
784s Unpacking liblua5.4-0:arm64 (5.4.7-1) ...
784s Selecting previously unselected package libncurses-dev:arm64.
784s Preparing to unpack .../081-libncurses-dev_6.5+20250216-2_arm64.deb ...
784s Unpacking libncurses-dev:arm64 (6.5+20250216-2) ...
784s Selecting previously unselected package libthai-data.
784s Preparing to unpack .../082-libthai-data_0.1.29-2build1_all.deb ...
784s Unpacking libthai-data (0.1.29-2build1) ...
784s Selecting previously unselected package libthai0:arm64.
784s Preparing to unpack .../083-libthai0_0.1.29-2build1_arm64.deb ...
784s Unpacking libthai0:arm64 (0.1.29-2build1) ...
784s Selecting previously unselected package libpango-1.0-0:arm64.
784s Preparing to unpack .../084-libpango-1.0-0_1.56.2-1_arm64.deb ...
784s Unpacking libpango-1.0-0:arm64 (1.56.2-1) ...
784s Selecting previously unselected package libpangoft2-1.0-0:arm64.
784s Preparing to unpack .../085-libpangoft2-1.0-0_1.56.2-1_arm64.deb ...
784s Unpacking libpangoft2-1.0-0:arm64 (1.56.2-1) ...
784s Selecting previously unselected package libpangocairo-1.0-0:arm64.
784s Preparing to unpack .../086-libpangocairo-1.0-0_1.56.2-1_arm64.deb ...
784s Unpacking libpangocairo-1.0-0:arm64 (1.56.2-1) ...
784s Selecting previously unselected package libpaper2:arm64.
784s Preparing to unpack .../087-libpaper2_2.2.5-0.3_arm64.deb ...
784s Unpacking libpaper2:arm64 (2.2.5-0.3) ...
784s Selecting previously unselected package libpaper-utils.
784s Preparing to unpack .../088-libpaper-utils_2.2.5-0.3_arm64.deb ...
784s Unpacking libpaper-utils (2.2.5-0.3) ...
784s Selecting previously unselected package libpcre2-16-0:arm64.
784s Preparing to unpack .../089-libpcre2-16-0_10.45-1_arm64.deb ...
784s Unpacking libpcre2-16-0:arm64 (10.45-1) ...
784s Selecting previously unselected package libpcre2-32-0:arm64.
784s Preparing to unpack .../090-libpcre2-32-0_10.45-1_arm64.deb ...
784s Unpacking libpcre2-32-0:arm64 (10.45-1) ...
784s Selecting previously unselected package libpcre2-posix3:arm64.
784s Preparing to unpack .../091-libpcre2-posix3_10.45-1_arm64.deb ...
784s Unpacking libpcre2-posix3:arm64 (10.45-1) ...
784s Selecting previously unselected package libpcre2-dev:arm64.
785s Preparing to unpack .../092-libpcre2-dev_10.45-1_arm64.deb ...
785s Unpacking libpcre2-dev:arm64 (10.45-1) ...
785s Selecting previously unselected package libpkgconf3:arm64.
785s Preparing to unpack .../093-libpkgconf3_1.8.1-4_arm64.deb ...
785s Unpacking libpkgconf3:arm64 (1.8.1-4) ...
785s Selecting previously unselected package zlib1g-dev:arm64.
785s Preparing to unpack .../094-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ...
785s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
785s Selecting previously unselected package libpng-dev:arm64.
785s Preparing to unpack .../095-libpng-dev_1.6.47-1_arm64.deb ...
785s Unpacking libpng-dev:arm64 (1.6.47-1) ...
785s Selecting previously unselected package libreadline-dev:arm64.
785s Preparing to unpack .../096-libreadline-dev_8.2-6_arm64.deb ...
785s Unpacking libreadline-dev:arm64 (8.2-6) ...
785s Selecting previously unselected package libsharpyuv0:arm64.
785s Preparing to unpack .../097-libsharpyuv0_1.5.0-0.1_arm64.deb ...
785s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ...
785s Selecting previously unselected package libsm6:arm64.
785s Preparing to unpack .../098-libsm6_2%3a1.2.4-1_arm64.deb ...
785s Unpacking libsm6:arm64 (2:1.2.4-1) ...
785s Selecting previously unselected package libtcl8.6:arm64.
785s Preparing to unpack .../099-libtcl8.6_8.6.16+dfsg-1_arm64.deb ...
785s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ...
785s Selecting previously unselected package libjbig0:arm64.
785s Preparing to unpack .../100-libjbig0_2.1-6.1ubuntu2_arm64.deb ...
785s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ...
785s Selecting previously unselected package libwebp7:arm64.
785s Preparing to unpack .../101-libwebp7_1.5.0-0.1_arm64.deb ...
785s Unpacking libwebp7:arm64 (1.5.0-0.1) ...
785s Selecting previously unselected package libtiff6:arm64.
785s Preparing to unpack .../102-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ...
785s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
785s Selecting previously unselected package libxft2:arm64.
785s Preparing to unpack .../103-libxft2_2.3.6-1build1_arm64.deb ...
785s Unpacking libxft2:arm64 (2.3.6-1build1) ...
785s Selecting previously unselected package libxss1:arm64.
785s Preparing to unpack .../104-libxss1_1%3a1.2.3-1build3_arm64.deb ...
785s Unpacking libxss1:arm64 (1:1.2.3-1build3) ...
785s Selecting previously unselected package libtk8.6:arm64.
785s Preparing to unpack .../105-libtk8.6_8.6.16-1_arm64.deb ...
785s Unpacking libtk8.6:arm64 (8.6.16-1) ...
785s Selecting previously unselected package libxt6t64:arm64.
785s Preparing to unpack .../106-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ...
785s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ...
785s Selecting previously unselected package zip.
785s Preparing to unpack .../107-zip_3.0-14ubuntu2_arm64.deb ...
785s Unpacking zip (3.0-14ubuntu2) ...
785s Selecting previously unselected package unzip.
785s Preparing to unpack .../108-unzip_6.0-28ubuntu6_arm64.deb ...
785s Unpacking unzip (6.0-28ubuntu6) ...
785s Selecting previously unselected package xdg-utils.
785s Preparing to unpack .../109-xdg-utils_1.2.1-2ubuntu1_all.deb ...
785s Unpacking xdg-utils (1.2.1-2ubuntu1) ...
785s Selecting previously unselected package r-base-core.
785s Preparing to unpack .../110-r-base-core_4.4.3-1_arm64.deb ...
785s Unpacking r-base-core (4.4.3-1) ...
786s Selecting previously unselected package r-cran-littler.
786s Preparing to unpack .../111-r-cran-littler_0.3.20-2_arm64.deb ...
786s Unpacking r-cran-littler (0.3.20-2) ...
786s Selecting previously unselected package littler.
786s Preparing to unpack .../112-littler_0.3.20-2_all.deb ...
786s Unpacking littler (0.3.20-2) ...
786s Selecting previously unselected package node-bootstrap-sass.
786s Preparing to unpack .../113-node-bootstrap-sass_3.4.3-2_all.deb ...
786s Unpacking node-bootstrap-sass (3.4.3-2) ...
786s Selecting previously unselected package node-html5shiv.
786s Preparing to unpack .../114-node-html5shiv_3.7.3+dfsg-5_all.deb ...
786s Unpacking node-html5shiv (3.7.3+dfsg-5) ...
786s Selecting previously unselected package node-normalize.css.
786s Preparing to unpack .../115-node-normalize.css_8.0.1-5_all.deb ...
786s Unpacking node-normalize.css (8.0.1-5) ...
786s Selecting previously unselected package pandoc-data.
786s Preparing to unpack .../116-pandoc-data_3.1.11.1-3build1_all.deb ...
786s Unpacking pandoc-data (3.1.11.1-3build1) ...
786s Selecting previously unselected package pandoc.
786s Preparing to unpack .../117-pandoc_3.1.11.1+ds-2_arm64.deb ...
786s Unpacking pandoc (3.1.11.1+ds-2) ...
787s Selecting previously unselected package liblzma-dev:arm64.
787s Preparing to unpack .../118-liblzma-dev_5.6.4-1_arm64.deb ...
787s Unpacking liblzma-dev:arm64 (5.6.4-1) ...
787s Selecting previously unselected package pkgconf-bin.
787s Preparing to unpack .../119-pkgconf-bin_1.8.1-4_arm64.deb ...
787s Unpacking pkgconf-bin (1.8.1-4) ...
787s Selecting previously unselected package pkgconf:arm64.
787s Preparing to unpack .../120-pkgconf_1.8.1-4_arm64.deb ...
787s Unpacking pkgconf:arm64 (1.8.1-4) ...
787s Selecting previously unselected package libtirpc-dev:arm64.
787s Preparing to unpack .../121-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ...
787s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ...
787s Selecting previously unselected package r-base-dev.
787s Preparing to unpack .../122-r-base-dev_4.4.3-1_all.deb ...
787s Unpacking r-base-dev (4.4.3-1) ...
787s Selecting previously unselected package pkg-r-autopkgtest.
787s Preparing to unpack .../123-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
787s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
787s Selecting previously unselected package r-cran-base64enc.
787s Preparing to unpack .../124-r-cran-base64enc_0.1-3-3_arm64.deb ...
787s Unpacking r-cran-base64enc (0.1-3-3) ...
787s Selecting previously unselected package r-cran-rlang.
787s Preparing to unpack .../125-r-cran-rlang_1.1.5-1_arm64.deb ...
787s Unpacking r-cran-rlang (1.1.5-1) ...
787s Selecting previously unselected package r-cran-fastmap.
787s Preparing to unpack .../126-r-cran-fastmap_1.2.0-1_arm64.deb ...
787s Unpacking r-cran-fastmap (1.2.0-1) ...
787s Selecting previously unselected package r-cran-cachem.
787s Preparing to unpack .../127-r-cran-cachem_1.1.0-1_arm64.deb ...
787s Unpacking r-cran-cachem (1.1.0-1) ...
787s Selecting previously unselected package r-cran-digest.
787s Preparing to unpack .../128-r-cran-digest_0.6.37-1_arm64.deb ...
787s Unpacking r-cran-digest (0.6.37-1) ...
788s Selecting previously unselected package r-cran-htmltools.
788s Preparing to unpack .../129-r-cran-htmltools_0.5.8.1-1_arm64.deb ...
788s Unpacking r-cran-htmltools (0.5.8.1-1) ...
788s Selecting previously unselected package r-cran-jquerylib.
788s Preparing to unpack .../130-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ...
788s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ...
788s Selecting previously unselected package r-cran-jsonlite.
788s Preparing to unpack .../131-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ...
788s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
788s Selecting previously unselected package r-cran-cli.
788s Preparing to unpack .../132-r-cran-cli_3.6.4-1_arm64.deb ...
788s Unpacking r-cran-cli (3.6.4-1) ...
788s Selecting previously unselected package r-cran-glue.
788s Preparing to unpack .../133-r-cran-glue_1.8.0-1_arm64.deb ...
788s Unpacking r-cran-glue (1.8.0-1) ...
788s Selecting previously unselected package r-cran-lifecycle.
788s Preparing to unpack .../134-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
788s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
788s Selecting previously unselected package r-cran-memoise.
788s Preparing to unpack .../135-r-cran-memoise_2.0.1-1_all.deb ...
788s Unpacking r-cran-memoise (2.0.1-1) ...
788s Selecting previously unselected package r-cran-mime.
788s Preparing to unpack .../136-r-cran-mime_0.12-2_arm64.deb ...
788s Unpacking r-cran-mime (0.12-2) ...
788s Selecting previously unselected package r-cran-fs.
788s Preparing to unpack .../137-r-cran-fs_1.6.5+dfsg-1_arm64.deb ...
788s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
788s Selecting previously unselected package r-cran-r6.
788s Preparing to unpack .../138-r-cran-r6_2.6.1-1_all.deb ...
788s Unpacking r-cran-r6 (2.6.1-1) ...
788s Selecting previously unselected package r-cran-rappdirs.
788s Preparing to unpack .../139-r-cran-rappdirs_0.3.3-1_arm64.deb ...
788s Unpacking r-cran-rappdirs (0.3.3-1) ...
788s Selecting previously unselected package r-cran-sass.
788s Preparing to unpack .../140-r-cran-sass_0.4.9+dfsg-1_arm64.deb ...
788s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
788s Selecting previously unselected package r-cran-bslib.
788s Preparing to unpack .../141-r-cran-bslib_0.8.0+dfsg-1_all.deb ...
788s Unpacking r-cran-bslib (0.8.0+dfsg-1) ...
788s Selecting previously unselected package r-cran-commonmark.
788s Preparing to unpack .../142-r-cran-commonmark_1.9.2-2_arm64.deb ...
788s Unpacking r-cran-commonmark (1.9.2-2) ...
788s Selecting previously unselected package r-cran-crayon.
788s Preparing to unpack .../143-r-cran-crayon_1.5.3-1_all.deb ...
788s Unpacking r-cran-crayon (1.5.3-1) ...
788s Selecting previously unselected package r-cran-diffobj.
788s Preparing to unpack .../144-r-cran-diffobj_0.3.5-1_arm64.deb ...
788s Unpacking r-cran-diffobj (0.3.5-1) ...
788s Selecting previously unselected package r-cran-evaluate.
788s Preparing to unpack .../145-r-cran-evaluate_1.0.3-1_all.deb ...
788s Unpacking r-cran-evaluate (1.0.3-1) ...
789s Selecting previously unselected package r-cran-fontawesome.
789s Preparing to unpack .../146-r-cran-fontawesome_0.5.3-1_all.deb ...
789s Unpacking r-cran-fontawesome (0.5.3-1) ...
789s Selecting previously unselected package r-cran-xfun.
789s Preparing to unpack .../147-r-cran-xfun_0.51+dfsg-1_arm64.deb ...
789s Unpacking r-cran-xfun (0.51+dfsg-1) ...
789s Selecting previously unselected package r-cran-highr.
789s Preparing to unpack .../148-r-cran-highr_0.11+dfsg-1_all.deb ...
789s Unpacking r-cran-highr (0.11+dfsg-1) ...
789s Selecting previously unselected package r-cran-pkgkitten.
789s Preparing to unpack .../149-r-cran-pkgkitten_0.2.4-1_all.deb ...
789s Unpacking r-cran-pkgkitten (0.2.4-1) ...
789s Selecting previously unselected package r-cran-rcpp.
789s Preparing to unpack .../150-r-cran-rcpp_1.0.14-1_arm64.deb ...
789s Unpacking r-cran-rcpp (1.0.14-1) ...
789s Selecting previously unselected package r-cran-later.
789s Preparing to unpack .../151-r-cran-later_1.4.1+dfsg-1_arm64.deb ...
789s Unpacking r-cran-later (1.4.1+dfsg-1) ...
789s Selecting previously unselected package r-cran-magrittr.
789s Preparing to unpack .../152-r-cran-magrittr_2.0.3-1_arm64.deb ...
789s Unpacking r-cran-magrittr (2.0.3-1) ...
789s Selecting previously unselected package r-cran-promises.
789s Preparing to unpack .../153-r-cran-promises_1.3.2+dfsg-1_arm64.deb ...
789s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
789s Selecting previously unselected package r-cran-httpuv.
789s Preparing to unpack .../154-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ...
789s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
789s Selecting previously unselected package r-cran-yaml.
789s Preparing to unpack .../155-r-cran-yaml_2.3.10-1_arm64.deb ...
789s Unpacking r-cran-yaml (2.3.10-1) ...
789s Selecting previously unselected package libjs-mathjax.
789s Preparing to unpack .../156-libjs-mathjax_2.7.9+dfsg-1_all.deb ...
789s Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
790s Selecting previously unselected package r-cran-knitr.
790s Preparing to unpack .../157-r-cran-knitr_1.49+dfsg-1_all.deb ...
790s Unpacking r-cran-knitr (1.49+dfsg-1) ...
790s Selecting previously unselected package r-cran-tinytex.
790s Preparing to unpack .../158-r-cran-tinytex_0.56-1_all.deb ...
790s Unpacking r-cran-tinytex (0.56-1) ...
790s Selecting previously unselected package libjs-modernizr.
790s Preparing to unpack .../159-libjs-modernizr_3.13.0-0.1_all.deb ...
790s Unpacking libjs-modernizr (3.13.0-0.1) ...
790s Selecting previously unselected package r-cran-xtable.
790s Preparing to unpack .../160-r-cran-xtable_1%3a1.8-4-2_all.deb ...
790s Unpacking r-cran-xtable (1:1.8-4-2) ...
790s Selecting previously unselected package r-cran-sourcetools.
790s Preparing to unpack .../161-r-cran-sourcetools_0.1.7-1-1_arm64.deb ...
790s Unpacking r-cran-sourcetools (0.1.7-1-1) ...
790s Selecting previously unselected package r-cran-withr.
790s Preparing to unpack .../162-r-cran-withr_3.0.2+dfsg-1_all.deb ...
790s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
790s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
790s Preparing to unpack .../163-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ...
790s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
790s Selecting previously unselected package r-cran-shiny.
790s Preparing to unpack .../164-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
790s Unpacking r-cran-shiny (1.10.0+dfsg-2) ...
790s Selecting previously unselected package r-cran-rmarkdown.
790s Preparing to unpack .../165-r-cran-rmarkdown_2.29+dfsg-1_all.deb ...
790s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ...
790s Setting up libjs-json (0~20221030+~1.0.8-1) ...
790s Setting up javascript-common (12) ...
790s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
790s Setting up libpixman-1-0:arm64 (0.44.0-3) ...
790s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ...
790s Setting up libncurses-dev:arm64 (6.5+20250216-2) ...
790s Setting up fonts-mathjax (2.7.9+dfsg-1) ...
790s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
790s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
790s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ...
790s Setting up libdatrie1:arm64 (0.2.13-3build1) ...
790s Setting up libjs-popper.js (1.16.1+ds-6) ...
790s Setting up libxcb-render0:arm64 (1.17.0-2) ...
790s Setting up libjs-sifter.js (0.6.0+dfsg-3) ...
790s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
790s Setting up unzip (6.0-28ubuntu6) ...
790s Setting up x11-common (1:7.7+23ubuntu3) ...
791s Setting up node-html5shiv (3.7.3+dfsg-5) ...
791s Setting up libdeflate0:arm64 (1.23-1) ...
791s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ...
791s Setting up libxcb-shm0:arm64 (1.17.0-2) ...
791s Setting up libreadline-dev:arm64 (8.2-6) ...
791s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ...
791s Setting up libjs-modernizr (3.13.0-0.1) ...
791s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ...
791s Setting up libpcre2-16-0:arm64 (10.45-1) ...
791s Setting up libjs-es5-shim (4.6.7-2) ...
791s Setting up zip (3.0-14ubuntu2) ...
791s Setting up libpcre2-32-0:arm64 (10.45-1) ...
791s Setting up libblas3:arm64 (3.12.1-2) ...
791s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
791s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ...
791s Setting up libpkgconf3:arm64 (1.8.1-4) ...
791s Setting up libjs-d3 (3.5.17-4) ...
791s Setting up fonts-dejavu-mono (2.37-8) ...
791s Setting up libmpc3:arm64 (1.3.1-1build2) ...
791s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ...
791s Setting up icu-devtools (76.1-1ubuntu2) ...
791s Setting up fonts-dejavu-core (2.37-8) ...
791s Setting up pkgconf-bin (1.8.1-4) ...
791s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
791s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ...
791s Setting up libwebp7:arm64 (1.5.0-0.1) ...
791s Setting up liblzma-dev:arm64 (5.6.4-1) ...
791s Setting up libubsan1:arm64 (15-20250222-0ubuntu1) ...
791s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
791s Setting up libpcre2-posix3:arm64 (10.45-1) ...
791s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ...
791s Setting up libhwasan0:arm64 (15-20250222-0ubuntu1) ...
791s Setting up libasan8:arm64 (15-20250222-0ubuntu1) ...
791s Setting up liblua5.4-0:arm64 (5.4.7-1) ...
791s Setting up libharfbuzz0b:arm64 (10.2.0-1) ...
791s Setting up libthai-data (0.1.29-2build1) ...
791s Setting up node-bootstrap-sass (3.4.3-2) ...
791s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ...
791s Setting up libxss1:arm64 (1:1.2.3-1build3) ...
791s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ...
791s Setting up libpaper2:arm64 (2.2.5-0.3) ...
791s Setting up pandoc-data (3.1.11.1-3build1) ...
791s Setting up libtsan2:arm64 (15-20250222-0ubuntu1) ...
791s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
791s Setting up libisl23:arm64 (0.27-1) ...
791s Setting up libdeflate-dev:arm64 (1.23-1) ...
791s Setting up node-normalize.css (8.0.1-5) ...
791s Setting up libicu-dev:arm64 (76.1-1ubuntu2) ...
791s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
791s Setting up xdg-utils (1.2.1-2ubuntu1) ...
791s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
791s Setting up libcc1-0:arm64 (15-20250222-0ubuntu1) ...
791s Setting up liblsan0:arm64 (15-20250222-0ubuntu1) ...
791s Setting up libblas-dev:arm64 (3.12.1-2) ...
791s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
791s Setting up dctrl-tools (2.24-3build3) ...
791s Setting up libjs-bootstrap (3.4.1+dfsg-3) ...
791s Setting up libitm1:arm64 (15-20250222-0ubuntu1) ...
791s Setting up libbz2-dev:arm64 (1.0.8-6) ...
791s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
791s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
791s Setting up libice6:arm64 (2:1.1.1-1) ...
791s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ...
791s Setting up liblapack3:arm64 (3.12.1-2) ...
791s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
791s Setting up libpcre2-dev:arm64 (10.45-1) ...
791s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
791s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
791s Setting up libpng-dev:arm64 (1.6.47-1) ...
791s Setting up libpaper-utils (2.2.5-0.3) ...
791s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ...
791s Setting up pkgconf:arm64 (1.8.1-4) ...
791s Setting up libthai0:arm64 (0.1.29-2build1) ...
791s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
791s Setting up pandoc (3.1.11.1+ds-2) ...
791s Setting up liblapack-dev:arm64 (3.12.1-2) ...
791s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
791s Setting up cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
791s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
791s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ...
791s Setting up libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ...
791s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ...
791s Setting up libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ...
791s Setting up libsm6:arm64 (2:1.2.4-1) ...
791s Setting up libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ...
791s Setting up fontconfig (2.15.0-2ubuntu1) ...
793s Regenerating fonts cache... done.
793s Setting up libxft2:arm64 (2.3.6-1build1) ...
793s Setting up libtk8.6:arm64 (8.6.16-1) ...
793s Setting up libpango-1.0-0:arm64 (1.56.2-1) ...
793s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ...
793s Setting up libcairo2:arm64 (1.18.2-2) ...
793s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
793s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ...
793s Setting up cpp-14 (14.2.0-17ubuntu3) ...
793s Setting up cpp (4:14.2.0-1ubuntu1) ...
793s Setting up gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
793s Setting up libpangoft2-1.0-0:arm64 (1.56.2-1) ...
793s Setting up libpangocairo-1.0-0:arm64 (1.56.2-1) ...
793s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
793s Setting up g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
793s Setting up gcc-14 (14.2.0-17ubuntu3) ...
793s Setting up r-base-core (4.4.3-1) ...
793s Creating config file /etc/R/Renviron with new version
794s Setting up r-cran-crayon (1.5.3-1) ...
794s Setting up r-cran-sourcetools (0.1.7-1-1) ...
794s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ...
794s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
794s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
794s Setting up r-cran-commonmark (1.9.2-2) ...
794s Setting up g++-14 (14.2.0-17ubuntu3) ...
794s Setting up r-cran-r6 (2.6.1-1) ...
794s Setting up r-cran-pkgkitten (0.2.4-1) ...
794s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
794s Setting up r-cran-magrittr (2.0.3-1) ...
794s Setting up r-cran-rappdirs (0.3.3-1) ...
794s Setting up r-cran-littler (0.3.20-2) ...
794s Setting up r-cran-fs (1.6.5+dfsg-1) ...
794s Setting up r-cran-rcpp (1.0.14-1) ...
794s Setting up r-cran-diffobj (0.3.5-1) ...
794s Setting up r-cran-rlang (1.1.5-1) ...
794s Setting up littler (0.3.20-2) ...
794s Setting up r-cran-xfun (0.51+dfsg-1) ...
794s Setting up r-cran-withr (3.0.2+dfsg-1) ...
794s Setting up r-cran-mime (0.12-2) ...
794s Setting up r-cran-base64enc (0.1-3-3) ...
794s Setting up r-cran-digest (0.6.37-1) ...
794s Setting up r-cran-yaml (2.3.10-1) ...
794s Setting up r-cran-evaluate (1.0.3-1) ...
794s Setting up r-cran-highr (0.11+dfsg-1) ...
794s Setting up r-cran-glue (1.8.0-1) ...
794s Setting up r-cran-xtable (1:1.8-4-2) ...
794s Setting up r-cran-cli (3.6.4-1) ...
794s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
794s Setting up gcc (4:14.2.0-1ubuntu1) ...
794s Setting up r-cran-fastmap (1.2.0-1) ...
794s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
794s Setting up r-cran-later (1.4.1+dfsg-1) ...
794s Setting up r-cran-htmltools (0.5.8.1-1) ...
794s Setting up r-cran-tinytex (0.56-1) ...
794s Setting up r-cran-knitr (1.49+dfsg-1) ...
794s Setting up g++ (4:14.2.0-1ubuntu1) ...
794s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
794s Setting up r-cran-cachem (1.1.0-1) ...
794s Setting up r-cran-sass (0.4.9+dfsg-1) ...
794s Setting up build-essential (12.10ubuntu1) ...
794s Setting up r-cran-fontawesome (0.5.3-1) ...
794s Setting up gfortran (4:14.2.0-1ubuntu1) ...
794s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
794s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
794s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
794s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
794s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
794s Setting up r-cran-memoise (2.0.1-1) ...
794s Setting up r-cran-promises (1.3.2+dfsg-1) ...
794s Setting up r-base-dev (4.4.3-1) ...
794s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
794s Setting up r-cran-bslib (0.8.0+dfsg-1) ...
794s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
794s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
794s Setting up r-cran-rmarkdown (2.29+dfsg-1) ...
794s Processing triggers for libc-bin (2.41-1ubuntu2) ...
794s Processing triggers for man-db (2.13.0-1) ...
796s Processing triggers for install-info (7.1.1-1) ...
799s autopkgtest [15:37:02]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
799s autopkgtest [15:37:02]: test pkg-r-autopkgtest: [-----------------------
800s Test: Try to load the R library diffobj
800s 
800s R version 4.4.3 (2025-02-28) -- "Trophy Case"
800s Copyright (C) 2025 The R Foundation for Statistical Computing
800s Platform: aarch64-unknown-linux-gnu
800s 
800s R is free software and comes with ABSOLUTELY NO WARRANTY.
800s You are welcome to redistribute it under certain conditions.
800s Type 'license()' or 'licence()' for distribution details.
800s 
800s R is a collaborative project with many contributors.
800s Type 'contributors()' for more information and
800s 'citation()' on how to cite R or R packages in publications.
800s 
800s Type 'demo()' for some demos, 'help()' for on-line help, or
800s 'help.start()' for an HTML browser interface to help.
800s Type 'q()' to quit R.
800s 
800s > library('diffobj')
800s > 
800s > 
800s Other tests are currently unsupported!
800s They will be progressively added.
800s autopkgtest [15:37:03]: test pkg-r-autopkgtest: -----------------------]
801s autopkgtest [15:37:04]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
801s pkg-r-autopkgtest    PASS
802s autopkgtest [15:37:05]: @@@@@@@@@@@@@@@@@@@@ summary
802s run-unit-test        PASS
802s pkg-r-autopkgtest    PASS
810s nova [W] Using flock in prodstack6-arm64
810s Creating nova instance adt-plucky-arm64-r-cran-diffobj-20250315-152342-juju-7f2275-prod-proposed-migration-environment-15-69a4a03a-e904-4c70-ae15-c91e93b20d4d from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)...
810s nova [W] Timed out waiting for aca57b0f-efe0-41a8-9194-611c59e7231d to get deleted.
810s nova [W] Using flock in prodstack6-arm64
810s flock: timeout while waiting to get lock
810s Creating nova instance adt-plucky-arm64-r-cran-diffobj-20250315-152342-juju-7f2275-prod-proposed-migration-environment-15-69a4a03a-e904-4c70-ae15-c91e93b20d4d from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)...
810s nova [W] Timed out waiting for d7713e29-2c51-44f2-a62a-a9f435fe5e8b to get deleted.