0s autopkgtest [15:22:11]: starting date and time: 2025-03-15 15:22:11+0000 0s autopkgtest [15:22:11]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:22:11]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.4z2xedcn/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-cmprsk --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-38.secgroup --name adt-plucky-arm64-r-cran-cmprsk-20250315-152211-juju-7f2275-prod-proposed-migration-environment-2-1f47ba2e-f47c-44d3-95b2-b02ed3e0eb7e --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 166s autopkgtest [15:24:57]: testbed dpkg architecture: arm64 166s autopkgtest [15:24:57]: testbed apt version: 2.9.33 166s autopkgtest [15:24:57]: @@@@@@@@@@@@@@@@@@@@ test bed setup 167s autopkgtest [15:24:58]: testbed release detected to be: None 168s autopkgtest [15:24:59]: updating testbed package index (apt update) 168s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 168s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 168s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 168s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 168s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 169s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 169s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 169s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [78.2 kB] 169s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1976 B] 169s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 169s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [346 kB] 169s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [15.8 kB] 169s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 169s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [572 B] 170s Fetched 1094 kB in 2s (668 kB/s) 171s Reading package lists... 171s Reading package lists... 172s Building dependency tree... 172s Reading state information... 172s Calculating upgrade... 172s Calculating upgrade... 173s The following packages will be upgraded: 173s python3-jinja2 strace 173s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 173s Need to get 608 kB of archives. 173s After this operation, 11.3 kB of additional disk space will be used. 173s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 174s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 174s Fetched 608 kB in 1s (617 kB/s) 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 175s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 175s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 175s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 175s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 175s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 175s Setting up strace (6.13+ds-1ubuntu1) ... 175s Processing triggers for man-db (2.13.0-1) ... 176s Reading package lists... 176s Building dependency tree... 176s Reading state information... 176s Solving dependencies... 177s The following packages will be REMOVED: 177s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 177s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 177s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 177s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 177s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 177s After this operation, 267 MB disk space will be freed. 177s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 177s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 177s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 177s Removing libpython3.12t64:arm64 (3.12.9-1) ... 177s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 177s Removing libnsl2:arm64 (1.3.0-3build3) ... 177s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 178s Removing libunwind8:arm64 (1.6.2-3.1) ... 178s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 178s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 180s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 180s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 180s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 180s /etc/kernel/postrm.d/initramfs-tools: 180s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 180s /etc/kernel/postrm.d/zz-flash-kernel: 180s flash-kernel: Kernel 6.11.0-8-generic has been removed. 180s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 180s /etc/kernel/postrm.d/zz-update-grub: 180s Sourcing file `/etc/default/grub' 180s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 180s Generating grub configuration file ... 181s Found linux image: /boot/vmlinuz-6.14.0-10-generic 181s Found initrd image: /boot/initrd.img-6.14.0-10-generic 181s Warning: os-prober will not be executed to detect other bootable partitions. 181s Systems on them will not be added to the GRUB boot configuration. 181s Check GRUB_DISABLE_OS_PROBER documentation entry. 181s Adding boot menu entry for UEFI Firmware Settings ... 181s done 181s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 181s Processing triggers for libc-bin (2.41-1ubuntu1) ... 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 181s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 181s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 181s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 182s autopkgtest [15:25:13]: upgrading testbed (apt dist-upgrade and autopurge) 182s Reading package lists... 182s Building dependency tree... 182s Reading state information... 183s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 183s Starting 2 pkgProblemResolver with broken count: 0 183s Done 183s Entering ResolveByKeep 184s 184s Calculating upgrade... 184s The following packages will be upgraded: 184s libc-bin libc-dev-bin libc6 libc6-dev locales 185s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 185s Need to get 9530 kB of archives. 185s After this operation, 0 B of additional disk space will be used. 185s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 186s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 187s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 190s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 191s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 195s Preconfiguring packages ... 195s Fetched 9530 kB in 10s (936 kB/s) 195s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 195s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 195s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 195s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 195s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 195s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 196s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 196s Setting up libc6:arm64 (2.41-1ubuntu2) ... 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 196s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 196s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 196s Setting up libc-bin (2.41-1ubuntu2) ... 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 196s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 196s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 197s Setting up locales (2.41-1ubuntu2) ... 198s Generating locales (this might take a while)... 199s en_US.UTF-8... done 199s Generation complete. 199s Setting up libc-dev-bin (2.41-1ubuntu2) ... 199s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 199s Processing triggers for man-db (2.13.0-1) ... 201s Processing triggers for systemd (257.3-1ubuntu3) ... 202s Reading package lists... 202s Building dependency tree... 202s Reading state information... 202s Starting pkgProblemResolver with broken count: 0 202s Starting 2 pkgProblemResolver with broken count: 0 202s Done 203s Solving dependencies... 203s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 204s autopkgtest [15:25:35]: rebooting testbed after setup commands that affected boot 227s autopkgtest [15:25:58]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 230s autopkgtest [15:26:01]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-cmprsk 232s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-cmprsk 2.2-12-1 (dsc) [2075 B] 232s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-cmprsk 2.2-12-1 (tar) [45.8 kB] 232s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-cmprsk 2.2-12-1 (diff) [3264 B] 232s gpgv: Signature made Tue Jan 28 08:28:23 2025 UTC 232s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 232s gpgv: issuer "plessy@debian.org" 232s gpgv: Can't check signature: No public key 232s dpkg-source: warning: cannot verify inline signature for ./r-cran-cmprsk_2.2-12-1.dsc: no acceptable signature found 232s autopkgtest [15:26:03]: testing package r-cran-cmprsk version 2.2-12-1 233s autopkgtest [15:26:04]: build not needed 238s autopkgtest [15:26:09]: test run-unit-test: preparing testbed 238s Reading package lists... 238s Building dependency tree... 239s Reading state information... 239s Starting pkgProblemResolver with broken count: 0 239s Starting 2 pkgProblemResolver with broken count: 0 239s Done 240s The following NEW packages will be installed: 240s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 240s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1 240s libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 240s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 240s libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 240s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 240s libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-cmprsk 240s r-cran-lattice r-cran-matrix r-cran-survival unzip x11-common xdg-utils zip 240s 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. 240s Need to get 52.1 MB of archives. 240s After this operation, 98.8 MB of additional disk space will be used. 240s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 241s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 242s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 242s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 242s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 242s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 242s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 242s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 243s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 243s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 243s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 243s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 243s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 243s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 244s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 244s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 244s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 244s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 245s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 245s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 245s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 245s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 247s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 247s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 248s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 248s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB] 248s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB] 248s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB] 248s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 248s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 248s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 248s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 248s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 249s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 249s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 249s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 250s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 250s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 250s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 251s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 251s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 251s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 251s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 251s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 278s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 279s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB] 283s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 289s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cmprsk arm64 2.2-12-1 [104 kB] 289s Preconfiguring packages ... 289s Fetched 52.1 MB in 49s (1062 kB/s) 289s Selecting previously unselected package fonts-dejavu-mono. 290s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 290s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 290s Unpacking fonts-dejavu-mono (2.37-8) ... 290s Selecting previously unselected package fonts-dejavu-core. 290s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 290s Unpacking fonts-dejavu-core (2.37-8) ... 290s Selecting previously unselected package fontconfig-config. 290s Preparing to unpack .../02-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ... 290s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 290s Selecting previously unselected package libfontconfig1:arm64. 290s Preparing to unpack .../03-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ... 290s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 290s Selecting previously unselected package fontconfig. 290s Preparing to unpack .../04-fontconfig_2.15.0-2ubuntu1_arm64.deb ... 290s Unpacking fontconfig (2.15.0-2ubuntu1) ... 290s Selecting previously unselected package libblas3:arm64. 290s Preparing to unpack .../05-libblas3_3.12.1-2_arm64.deb ... 290s Unpacking libblas3:arm64 (3.12.1-2) ... 290s Selecting previously unselected package libpixman-1-0:arm64. 290s Preparing to unpack .../06-libpixman-1-0_0.44.0-3_arm64.deb ... 290s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 290s Selecting previously unselected package libxcb-render0:arm64. 290s Preparing to unpack .../07-libxcb-render0_1.17.0-2_arm64.deb ... 290s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 290s Selecting previously unselected package libxcb-shm0:arm64. 290s Preparing to unpack .../08-libxcb-shm0_1.17.0-2_arm64.deb ... 290s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 290s Selecting previously unselected package libxrender1:arm64. 290s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 290s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 290s Selecting previously unselected package libcairo2:arm64. 290s Preparing to unpack .../10-libcairo2_1.18.2-2_arm64.deb ... 290s Unpacking libcairo2:arm64 (1.18.2-2) ... 290s Selecting previously unselected package libdatrie1:arm64. 290s Preparing to unpack .../11-libdatrie1_0.2.13-3build1_arm64.deb ... 290s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 290s Selecting previously unselected package libdeflate0:arm64. 290s Preparing to unpack .../12-libdeflate0_1.23-1_arm64.deb ... 290s Unpacking libdeflate0:arm64 (1.23-1) ... 290s Selecting previously unselected package libgfortran5:arm64. 290s Preparing to unpack .../13-libgfortran5_15-20250222-0ubuntu1_arm64.deb ... 290s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ... 290s Selecting previously unselected package libgomp1:arm64. 290s Preparing to unpack .../14-libgomp1_15-20250222-0ubuntu1_arm64.deb ... 290s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ... 290s Selecting previously unselected package libgraphite2-3:arm64. 290s Preparing to unpack .../15-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 290s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 290s Selecting previously unselected package libharfbuzz0b:arm64. 290s Preparing to unpack .../16-libharfbuzz0b_10.2.0-1_arm64.deb ... 290s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 291s Selecting previously unselected package x11-common. 291s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu3_all.deb ... 291s Unpacking x11-common (1:7.7+23ubuntu3) ... 291s Selecting previously unselected package libice6:arm64. 291s Preparing to unpack .../18-libice6_2%3a1.1.1-1_arm64.deb ... 291s Unpacking libice6:arm64 (2:1.1.1-1) ... 291s Selecting previously unselected package libjpeg-turbo8:arm64. 291s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 291s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 291s Selecting previously unselected package libjpeg8:arm64. 291s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_arm64.deb ... 291s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 291s Selecting previously unselected package liblapack3:arm64. 291s Preparing to unpack .../21-liblapack3_3.12.1-2_arm64.deb ... 291s Unpacking liblapack3:arm64 (3.12.1-2) ... 291s Selecting previously unselected package liblerc4:arm64. 291s Preparing to unpack .../22-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 291s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 291s Selecting previously unselected package libthai-data. 291s Preparing to unpack .../23-libthai-data_0.1.29-2build1_all.deb ... 291s Unpacking libthai-data (0.1.29-2build1) ... 291s Selecting previously unselected package libthai0:arm64. 291s Preparing to unpack .../24-libthai0_0.1.29-2build1_arm64.deb ... 291s Unpacking libthai0:arm64 (0.1.29-2build1) ... 291s Selecting previously unselected package libpango-1.0-0:arm64. 291s Preparing to unpack .../25-libpango-1.0-0_1.56.2-1_arm64.deb ... 291s Unpacking libpango-1.0-0:arm64 (1.56.2-1) ... 291s Selecting previously unselected package libpangoft2-1.0-0:arm64. 291s Preparing to unpack .../26-libpangoft2-1.0-0_1.56.2-1_arm64.deb ... 291s Unpacking libpangoft2-1.0-0:arm64 (1.56.2-1) ... 291s Selecting previously unselected package libpangocairo-1.0-0:arm64. 291s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.2-1_arm64.deb ... 291s Unpacking libpangocairo-1.0-0:arm64 (1.56.2-1) ... 291s Selecting previously unselected package libpaper2:arm64. 291s Preparing to unpack .../28-libpaper2_2.2.5-0.3_arm64.deb ... 291s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 291s Selecting previously unselected package libpaper-utils. 291s Preparing to unpack .../29-libpaper-utils_2.2.5-0.3_arm64.deb ... 291s Unpacking libpaper-utils (2.2.5-0.3) ... 291s Selecting previously unselected package libsharpyuv0:arm64. 291s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_arm64.deb ... 291s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 291s Selecting previously unselected package libsm6:arm64. 291s Preparing to unpack .../31-libsm6_2%3a1.2.4-1_arm64.deb ... 291s Unpacking libsm6:arm64 (2:1.2.4-1) ... 291s Selecting previously unselected package libtcl8.6:arm64. 291s Preparing to unpack .../32-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 291s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 291s Selecting previously unselected package libjbig0:arm64. 291s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 291s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 291s Selecting previously unselected package libwebp7:arm64. 291s Preparing to unpack .../34-libwebp7_1.5.0-0.1_arm64.deb ... 291s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 291s Selecting previously unselected package libtiff6:arm64. 291s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 291s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 291s Selecting previously unselected package libxft2:arm64. 291s Preparing to unpack .../36-libxft2_2.3.6-1build1_arm64.deb ... 291s Unpacking libxft2:arm64 (2.3.6-1build1) ... 291s Selecting previously unselected package libxss1:arm64. 291s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build3_arm64.deb ... 291s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 291s Selecting previously unselected package libtk8.6:arm64. 291s Preparing to unpack .../38-libtk8.6_8.6.16-1_arm64.deb ... 291s Unpacking libtk8.6:arm64 (8.6.16-1) ... 291s Selecting previously unselected package libxt6t64:arm64. 292s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 292s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 292s Selecting previously unselected package zip. 292s Preparing to unpack .../40-zip_3.0-14ubuntu2_arm64.deb ... 292s Unpacking zip (3.0-14ubuntu2) ... 292s Selecting previously unselected package unzip. 292s Preparing to unpack .../41-unzip_6.0-28ubuntu6_arm64.deb ... 292s Unpacking unzip (6.0-28ubuntu6) ... 292s Selecting previously unselected package xdg-utils. 292s Preparing to unpack .../42-xdg-utils_1.2.1-2ubuntu1_all.deb ... 292s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 292s Selecting previously unselected package r-base-core. 292s Preparing to unpack .../43-r-base-core_4.4.3-1_arm64.deb ... 292s Unpacking r-base-core (4.4.3-1) ... 292s Selecting previously unselected package r-cran-lattice. 292s Preparing to unpack .../44-r-cran-lattice_0.22-6-1_arm64.deb ... 292s Unpacking r-cran-lattice (0.22-6-1) ... 292s Selecting previously unselected package r-cran-matrix. 292s Preparing to unpack .../45-r-cran-matrix_1.7-3-1_arm64.deb ... 292s Unpacking r-cran-matrix (1.7-3-1) ... 292s Selecting previously unselected package r-cran-survival. 292s Preparing to unpack .../46-r-cran-survival_3.8-3-1_arm64.deb ... 292s Unpacking r-cran-survival (3.8-3-1) ... 292s Selecting previously unselected package r-cran-cmprsk. 292s Preparing to unpack .../47-r-cran-cmprsk_2.2-12-1_arm64.deb ... 292s Unpacking r-cran-cmprsk (2.2-12-1) ... 292s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 292s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 292s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 292s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 292s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 292s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 292s Setting up libxcb-render0:arm64 (1.17.0-2) ... 292s Setting up unzip (6.0-28ubuntu6) ... 292s Setting up x11-common (1:7.7+23ubuntu3) ... 293s Setting up libdeflate0:arm64 (1.23-1) ... 293s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 293s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ... 293s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 293s Setting up zip (3.0-14ubuntu2) ... 293s Setting up libblas3:arm64 (3.12.1-2) ... 293s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 293s Setting up fonts-dejavu-mono (2.37-8) ... 293s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ... 293s Setting up fonts-dejavu-core (2.37-8) ... 293s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 293s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ... 293s Setting up libwebp7:arm64 (1.5.0-0.1) ... 293s Setting up libharfbuzz0b:arm64 (10.2.0-1) ... 293s Setting up libthai-data (0.1.29-2build1) ... 293s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 293s Setting up libpaper2:arm64 (2.2.5-0.3) ... 293s Setting up xdg-utils (1.2.1-2ubuntu1) ... 293s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 293s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 293s Setting up libice6:arm64 (2:1.1.1-1) ... 293s Setting up liblapack3:arm64 (3.12.1-2) ... 293s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 293s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 293s Setting up libpaper-utils (2.2.5-0.3) ... 293s Setting up libthai0:arm64 (0.1.29-2build1) ... 293s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 293s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 293s Setting up libsm6:arm64 (2:1.2.4-1) ... 293s Setting up fontconfig (2.15.0-2ubuntu1) ... 295s Regenerating fonts cache... done. 295s Setting up libxft2:arm64 (2.3.6-1build1) ... 295s Setting up libtk8.6:arm64 (8.6.16-1) ... 295s Setting up libpango-1.0-0:arm64 (1.56.2-1) ... 295s Setting up libcairo2:arm64 (1.18.2-2) ... 295s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 295s Setting up libpangoft2-1.0-0:arm64 (1.56.2-1) ... 295s Setting up libpangocairo-1.0-0:arm64 (1.56.2-1) ... 295s Setting up r-base-core (4.4.3-1) ... 295s Creating config file /etc/R/Renviron with new version 295s Setting up r-cran-lattice (0.22-6-1) ... 295s Setting up r-cran-matrix (1.7-3-1) ... 295s Setting up r-cran-survival (3.8-3-1) ... 295s Setting up r-cran-cmprsk (2.2-12-1) ... 295s Processing triggers for libc-bin (2.41-1ubuntu2) ... 295s Processing triggers for man-db (2.13.0-1) ... 297s Processing triggers for install-info (7.1.1-1) ... 298s autopkgtest [15:27:09]: test run-unit-test: [----------------------- 300s Test test passed 300s autopkgtest [15:27:11]: test run-unit-test: -----------------------] 301s run-unit-test PASS 301s autopkgtest [15:27:12]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 301s autopkgtest [15:27:12]: test pkg-r-autopkgtest: preparing testbed 301s Reading package lists... 302s Building dependency tree... 302s Reading state information... 302s Starting pkgProblemResolver with broken count: 0 302s Starting 2 pkgProblemResolver with broken count: 0 302s Done 303s The following NEW packages will be installed: 303s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 303s dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 303s gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 303s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 303s libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 303s libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 303s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 303s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 303s libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev 303s libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev 303s zlib1g-dev 303s 0 upgraded, 54 newly installed, 0 to remove and 0 not upgraded. 303s Need to get 92.7 MB of archives. 303s After this operation, 334 MB of additional disk space will be used. 303s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 304s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 304s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB] 311s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B] 311s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 311s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 311s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB] 311s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB] 311s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB] 313s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB] 314s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB] 316s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB] 317s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB] 318s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB] 320s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB] 335s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB] 335s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 335s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 335s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB] 337s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB] 346s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB] 346s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 346s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 347s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 347s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 347s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB] 347s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB] 358s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB] 358s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 358s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 358s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 358s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 358s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 359s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 359s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 371s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 372s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 372s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 372s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 376s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 377s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 377s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 377s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 378s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 379s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 379s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 380s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB] 380s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 380s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB] 381s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 381s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 381s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 381s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B] 381s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 382s Fetched 92.7 MB in 1min 18s (1188 kB/s) 382s Selecting previously unselected package libisl23:arm64. 382s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84165 files and directories currently installed.) 382s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ... 382s Unpacking libisl23:arm64 (0.27-1) ... 382s Selecting previously unselected package libmpc3:arm64. 382s Preparing to unpack .../01-libmpc3_1.3.1-1build2_arm64.deb ... 382s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 382s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 382s Preparing to unpack .../02-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 382s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 382s Selecting previously unselected package cpp-14. 382s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_arm64.deb ... 382s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 382s Selecting previously unselected package cpp-aarch64-linux-gnu. 382s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 382s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 382s Selecting previously unselected package cpp. 383s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 383s Unpacking cpp (4:14.2.0-1ubuntu1) ... 383s Selecting previously unselected package libcc1-0:arm64. 383s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_arm64.deb ... 383s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ... 383s Selecting previously unselected package libitm1:arm64. 383s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_arm64.deb ... 383s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ... 383s Selecting previously unselected package libasan8:arm64. 383s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_arm64.deb ... 383s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ... 383s Selecting previously unselected package liblsan0:arm64. 383s Preparing to unpack .../09-liblsan0_15-20250222-0ubuntu1_arm64.deb ... 383s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ... 383s Selecting previously unselected package libtsan2:arm64. 383s Preparing to unpack .../10-libtsan2_15-20250222-0ubuntu1_arm64.deb ... 383s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ... 383s Selecting previously unselected package libubsan1:arm64. 383s Preparing to unpack .../11-libubsan1_15-20250222-0ubuntu1_arm64.deb ... 383s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ... 383s Selecting previously unselected package libhwasan0:arm64. 383s Preparing to unpack .../12-libhwasan0_15-20250222-0ubuntu1_arm64.deb ... 383s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ... 383s Selecting previously unselected package libgcc-14-dev:arm64. 383s Preparing to unpack .../13-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ... 383s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 383s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 383s Preparing to unpack .../14-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 383s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 384s Selecting previously unselected package gcc-14. 384s Preparing to unpack .../15-gcc-14_14.2.0-17ubuntu3_arm64.deb ... 384s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 384s Selecting previously unselected package gcc-aarch64-linux-gnu. 384s Preparing to unpack .../16-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 384s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 384s Selecting previously unselected package gcc. 384s Preparing to unpack .../17-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ... 384s Unpacking gcc (4:14.2.0-1ubuntu1) ... 384s Selecting previously unselected package libstdc++-14-dev:arm64. 384s Preparing to unpack .../18-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ... 384s Unpacking libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 384s Selecting previously unselected package g++-14-aarch64-linux-gnu. 384s Preparing to unpack .../19-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 384s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 384s Selecting previously unselected package g++-14. 384s Preparing to unpack .../20-g++-14_14.2.0-17ubuntu3_arm64.deb ... 384s Unpacking g++-14 (14.2.0-17ubuntu3) ... 384s Selecting previously unselected package g++-aarch64-linux-gnu. 384s Preparing to unpack .../21-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 384s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 384s Selecting previously unselected package g++. 384s Preparing to unpack .../22-g++_4%3a14.2.0-1ubuntu1_arm64.deb ... 384s Unpacking g++ (4:14.2.0-1ubuntu1) ... 384s Selecting previously unselected package build-essential. 384s Preparing to unpack .../23-build-essential_12.10ubuntu1_arm64.deb ... 384s Unpacking build-essential (12.10ubuntu1) ... 384s Selecting previously unselected package dctrl-tools. 384s Preparing to unpack .../24-dctrl-tools_2.24-3build3_arm64.deb ... 384s Unpacking dctrl-tools (2.24-3build3) ... 384s Selecting previously unselected package libgfortran-14-dev:arm64. 384s Preparing to unpack .../25-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ... 384s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 384s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 385s Preparing to unpack .../26-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 385s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 385s Selecting previously unselected package gfortran-14. 385s Preparing to unpack .../27-gfortran-14_14.2.0-17ubuntu3_arm64.deb ... 385s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 385s Selecting previously unselected package gfortran-aarch64-linux-gnu. 385s Preparing to unpack .../28-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 385s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 385s Selecting previously unselected package gfortran. 385s Preparing to unpack .../29-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ... 385s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 385s Selecting previously unselected package icu-devtools. 385s Preparing to unpack .../30-icu-devtools_76.1-1ubuntu2_arm64.deb ... 385s Unpacking icu-devtools (76.1-1ubuntu2) ... 385s Selecting previously unselected package libblas-dev:arm64. 385s Preparing to unpack .../31-libblas-dev_3.12.1-2_arm64.deb ... 385s Unpacking libblas-dev:arm64 (3.12.1-2) ... 385s Selecting previously unselected package libbz2-dev:arm64. 385s Preparing to unpack .../32-libbz2-dev_1.0.8-6_arm64.deb ... 385s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 385s Selecting previously unselected package libdeflate-dev:arm64. 385s Preparing to unpack .../33-libdeflate-dev_1.23-1_arm64.deb ... 385s Unpacking libdeflate-dev:arm64 (1.23-1) ... 385s Selecting previously unselected package libicu-dev:arm64. 385s Preparing to unpack .../34-libicu-dev_76.1-1ubuntu2_arm64.deb ... 385s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 385s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 385s Preparing to unpack .../35-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 385s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 385s Selecting previously unselected package libjpeg8-dev:arm64. 385s Preparing to unpack .../36-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 385s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 385s Selecting previously unselected package libjpeg-dev:arm64. 385s Preparing to unpack .../37-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 385s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 385s Selecting previously unselected package liblapack-dev:arm64. 385s Preparing to unpack .../38-liblapack-dev_3.12.1-2_arm64.deb ... 385s Unpacking liblapack-dev:arm64 (3.12.1-2) ... 386s Selecting previously unselected package libncurses-dev:arm64. 386s Preparing to unpack .../39-libncurses-dev_6.5+20250216-2_arm64.deb ... 386s Unpacking libncurses-dev:arm64 (6.5+20250216-2) ... 386s Selecting previously unselected package libpcre2-16-0:arm64. 386s Preparing to unpack .../40-libpcre2-16-0_10.45-1_arm64.deb ... 386s Unpacking libpcre2-16-0:arm64 (10.45-1) ... 386s Selecting previously unselected package libpcre2-32-0:arm64. 386s Preparing to unpack .../41-libpcre2-32-0_10.45-1_arm64.deb ... 386s Unpacking libpcre2-32-0:arm64 (10.45-1) ... 386s Selecting previously unselected package libpcre2-posix3:arm64. 386s Preparing to unpack .../42-libpcre2-posix3_10.45-1_arm64.deb ... 386s Unpacking libpcre2-posix3:arm64 (10.45-1) ... 386s Selecting previously unselected package libpcre2-dev:arm64. 386s Preparing to unpack .../43-libpcre2-dev_10.45-1_arm64.deb ... 386s Unpacking libpcre2-dev:arm64 (10.45-1) ... 386s Selecting previously unselected package libpkgconf3:arm64. 386s Preparing to unpack .../44-libpkgconf3_1.8.1-4_arm64.deb ... 386s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 386s Selecting previously unselected package zlib1g-dev:arm64. 386s Preparing to unpack .../45-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 386s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 386s Selecting previously unselected package libpng-dev:arm64. 386s Preparing to unpack .../46-libpng-dev_1.6.47-1_arm64.deb ... 386s Unpacking libpng-dev:arm64 (1.6.47-1) ... 386s Selecting previously unselected package libreadline-dev:arm64. 386s Preparing to unpack .../47-libreadline-dev_8.2-6_arm64.deb ... 386s Unpacking libreadline-dev:arm64 (8.2-6) ... 386s Selecting previously unselected package liblzma-dev:arm64. 386s Preparing to unpack .../48-liblzma-dev_5.6.4-1_arm64.deb ... 386s Unpacking liblzma-dev:arm64 (5.6.4-1) ... 386s Selecting previously unselected package pkgconf-bin. 386s Preparing to unpack .../49-pkgconf-bin_1.8.1-4_arm64.deb ... 386s Unpacking pkgconf-bin (1.8.1-4) ... 386s Selecting previously unselected package pkgconf:arm64. 386s Preparing to unpack .../50-pkgconf_1.8.1-4_arm64.deb ... 386s Unpacking pkgconf:arm64 (1.8.1-4) ... 386s Selecting previously unselected package libtirpc-dev:arm64. 386s Preparing to unpack .../51-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 386s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 386s Selecting previously unselected package r-base-dev. 386s Preparing to unpack .../52-r-base-dev_4.4.3-1_all.deb ... 386s Unpacking r-base-dev (4.4.3-1) ... 386s Selecting previously unselected package pkg-r-autopkgtest. 386s Preparing to unpack .../53-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 386s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 386s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 386s Setting up libncurses-dev:arm64 (6.5+20250216-2) ... 386s Setting up libreadline-dev:arm64 (8.2-6) ... 386s Setting up libpcre2-16-0:arm64 (10.45-1) ... 386s Setting up libpcre2-32-0:arm64 (10.45-1) ... 386s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 386s Setting up libpkgconf3:arm64 (1.8.1-4) ... 386s Setting up libmpc3:arm64 (1.3.1-1build2) ... 386s Setting up icu-devtools (76.1-1ubuntu2) ... 386s Setting up pkgconf-bin (1.8.1-4) ... 386s Setting up liblzma-dev:arm64 (5.6.4-1) ... 386s Setting up libubsan1:arm64 (15-20250222-0ubuntu1) ... 386s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 386s Setting up libpcre2-posix3:arm64 (10.45-1) ... 386s Setting up libhwasan0:arm64 (15-20250222-0ubuntu1) ... 386s Setting up libasan8:arm64 (15-20250222-0ubuntu1) ... 386s Setting up libtsan2:arm64 (15-20250222-0ubuntu1) ... 386s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 386s Setting up libisl23:arm64 (0.27-1) ... 386s Setting up libdeflate-dev:arm64 (1.23-1) ... 386s Setting up libicu-dev:arm64 (76.1-1ubuntu2) ... 386s Setting up libcc1-0:arm64 (15-20250222-0ubuntu1) ... 386s Setting up liblsan0:arm64 (15-20250222-0ubuntu1) ... 386s Setting up libblas-dev:arm64 (3.12.1-2) ... 386s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 386s Setting up dctrl-tools (2.24-3build3) ... 386s Setting up libitm1:arm64 (15-20250222-0ubuntu1) ... 386s Setting up libbz2-dev:arm64 (1.0.8-6) ... 386s Setting up libpcre2-dev:arm64 (10.45-1) ... 386s Setting up libpng-dev:arm64 (1.6.47-1) ... 386s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 386s Setting up pkgconf:arm64 (1.8.1-4) ... 386s Setting up liblapack-dev:arm64 (3.12.1-2) ... 386s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 386s Setting up cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 386s Setting up libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 386s Setting up libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 386s Setting up libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 386s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 386s Setting up cpp-14 (14.2.0-17ubuntu3) ... 386s Setting up cpp (4:14.2.0-1ubuntu1) ... 386s Setting up gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 386s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 386s Setting up g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 386s Setting up gcc-14 (14.2.0-17ubuntu3) ... 386s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 386s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 386s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 386s Setting up g++-14 (14.2.0-17ubuntu3) ... 386s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 386s Setting up gcc (4:14.2.0-1ubuntu1) ... 386s Setting up g++ (4:14.2.0-1ubuntu1) ... 386s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 386s Setting up build-essential (12.10ubuntu1) ... 386s Setting up gfortran (4:14.2.0-1ubuntu1) ... 386s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 386s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 386s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 386s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 386s Setting up r-base-dev (4.4.3-1) ... 386s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 386s Processing triggers for libc-bin (2.41-1ubuntu2) ... 386s Processing triggers for man-db (2.13.0-1) ... 387s Processing triggers for install-info (7.1.1-1) ... 389s autopkgtest [15:28:40]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 389s autopkgtest [15:28:40]: test pkg-r-autopkgtest: [----------------------- 389s Test: Try to load the R library cmprsk 389s 389s R version 4.4.3 (2025-02-28) -- "Trophy Case" 389s Copyright (C) 2025 The R Foundation for Statistical Computing 389s Platform: aarch64-unknown-linux-gnu 389s 389s R is free software and comes with ABSOLUTELY NO WARRANTY. 389s You are welcome to redistribute it under certain conditions. 389s Type 'license()' or 'licence()' for distribution details. 389s 389s R is a collaborative project with many contributors. 389s Type 'contributors()' for more information and 389s 'citation()' on how to cite R or R packages in publications. 389s 389s Type 'demo()' for some demos, 'help()' for on-line help, or 389s 'help.start()' for an HTML browser interface to help. 389s Type 'q()' to quit R. 389s 389s > library('cmprsk') 389s Loading required package: survival 390s > 390s > 390s Other tests are currently unsupported! 390s They will be progressively added. 390s autopkgtest [15:28:41]: test pkg-r-autopkgtest: -----------------------] 391s pkg-r-autopkgtest PASS 391s autopkgtest [15:28:42]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 391s autopkgtest [15:28:42]: @@@@@@@@@@@@@@@@@@@@ summary 391s run-unit-test PASS 391s pkg-r-autopkgtest PASS 409s nova [W] Using flock in prodstack6-arm64 409s Creating nova instance adt-plucky-arm64-r-cran-cmprsk-20250315-152211-juju-7f2275-prod-proposed-migration-environment-2-1f47ba2e-f47c-44d3-95b2-b02ed3e0eb7e from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 409s nova [W] Timed out waiting for de3ba498-d701-4df9-8752-7c54489bcda9 to get deleted.