0s autopkgtest [13:56:49]: starting date and time: 2025-01-09 13:56:49+0000
  0s autopkgtest [13:56:49]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [13:56:49]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.uqsgr3gz/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-bigmemory --apt-upgrade r-cran-bigmemory --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-bigmemory/4.6.4-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-4.secgroup --name adt-plucky-arm64-r-cran-bigmemory-20250109-135649-juju-7f2275-prod-proposed-migration-environment-20-a5db2688-8142-4dc6-a602-1f2f12057b75 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
107s autopkgtest [13:58:36]: testbed dpkg architecture: arm64
108s autopkgtest [13:58:37]: testbed apt version: 2.9.18
108s autopkgtest [13:58:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup
108s autopkgtest [13:58:37]: testbed release detected to be: None
109s autopkgtest [13:58:38]: updating testbed package index (apt update)
109s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
110s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
110s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
110s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
110s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [760 kB]
110s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B]
110s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [127 kB]
110s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.6 kB]
110s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [243 kB]
110s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [57.8 kB]
110s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [978 kB]
110s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [11.7 kB]
110s Fetched 2278 kB in 1s (2284 kB/s)
111s Reading package lists...
112s Reading package lists...
112s Building dependency tree...
112s Reading state information...
113s Calculating upgrade...
113s The following packages will be upgraded:
113s   libgpgme11t64 python3-oauthlib
113s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
113s Need to get 232 kB of archives.
113s After this operation, 0 B of additional disk space will be used.
113s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libgpgme11t64 arm64 1.24.1-2ubuntu1 [142 kB]
114s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-oauthlib all 3.2.2-3 [89.9 kB]
114s Fetched 232 kB in 0s (543 kB/s)
114s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80185 files and directories currently installed.)
114s Preparing to unpack .../libgpgme11t64_1.24.1-2ubuntu1_arm64.deb ...
114s Unpacking libgpgme11t64:arm64 (1.24.1-2ubuntu1) over (1.24.0-2ubuntu1) ...
114s Preparing to unpack .../python3-oauthlib_3.2.2-3_all.deb ...
114s Unpacking python3-oauthlib (3.2.2-3) over (3.2.2-2) ...
115s Setting up python3-oauthlib (3.2.2-3) ...
115s Setting up libgpgme11t64:arm64 (1.24.1-2ubuntu1) ...
115s Processing triggers for libc-bin (2.40-4ubuntu1) ...
115s Reading package lists...
115s Building dependency tree...
115s Reading state information...
116s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
116s autopkgtest [13:58:45]: upgrading testbed (apt dist-upgrade and autopurge)
116s Reading package lists...
116s Building dependency tree...
116s Reading state information...
117s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
117s Starting 2 pkgProblemResolver with broken count: 0
117s Done
118s Entering ResolveByKeep
118s 
119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
119s Reading package lists...
119s Building dependency tree...
119s Reading state information...
120s Starting pkgProblemResolver with broken count: 0
120s Starting 2 pkgProblemResolver with broken count: 0
120s Done
120s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
123s autopkgtest [13:58:52]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024
123s autopkgtest [13:58:52]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-bigmemory
125s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-bigmemory 4.6.4-1 (dsc) [2219 B]
125s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-bigmemory 4.6.4-1 (tar) [72.3 kB]
125s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-bigmemory 4.6.4-1 (diff) [3096 B]
125s gpgv: Signature made Wed Jan 17 13:08:49 2024 UTC
125s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
125s gpgv:                issuer "tille@debian.org"
125s gpgv: Can't check signature: No public key
125s dpkg-source: warning: cannot verify inline signature for ./r-cran-bigmemory_4.6.4-1.dsc: no acceptable signature found
125s autopkgtest [13:58:54]: testing package r-cran-bigmemory version 4.6.4-1
125s autopkgtest [13:58:54]: build not needed
127s autopkgtest [13:58:56]: test run-unit-test: preparing testbed
127s Reading package lists...
128s Building dependency tree...
128s Reading state information...
128s Starting pkgProblemResolver with broken count: 0
128s Starting 2 pkgProblemResolver with broken count: 0
128s Done
129s The following NEW packages will be installed:
129s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libasan8
129s   libblas3 libboost-dev libboost1.83-dev libcairo2 libdatrie1 libdeflate0
129s   libfontconfig1 libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3
129s   libharfbuzz0b libhwasan0 libice6 libitm1 libjbig0 libjpeg-turbo8 libjpeg8
129s   liblapack3 liblerc4 liblsan0 libpango-1.0-0 libpangocairo-1.0-0
129s   libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6
129s   libstdc++-14-dev libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libtsan2
129s   libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1
129s   libxt6t64 littler r-base-core r-cran-bh r-cran-bigmemory
129s   r-cran-bigmemory.sri r-cran-brio r-cran-callr r-cran-cli r-cran-crayon
129s   r-cran-desc r-cran-diffobj r-cran-digest r-cran-evaluate r-cran-fs
129s   r-cran-glue r-cran-jsonlite r-cran-lifecycle r-cran-littler r-cran-magrittr
129s   r-cran-pkgbuild r-cran-pkgkitten r-cran-pkgload r-cran-praise
129s   r-cran-processx r-cran-ps r-cran-r6 r-cran-rcpp r-cran-remotes r-cran-rlang
129s   r-cran-rprojroot r-cran-testthat r-cran-uuid r-cran-waldo r-cran-withr unzip
129s   x11-common xdg-utils zip
129s 0 upgraded, 87 newly installed, 0 to remove and 0 not upgraded.
129s Need to get 76.9 MB of archives.
129s After this operation, 342 MB of additional disk space will be used.
129s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
129s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
129s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB]
129s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB]
129s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB]
129s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-12ubuntu1 [2896 kB]
130s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB]
130s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-12ubuntu1 [145 kB]
130s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-12ubuntu1 [27.7 kB]
130s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-12ubuntu1 [1283 kB]
130s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-12ubuntu1 [2687 kB]
130s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-12ubuntu1 [1152 kB]
130s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-12ubuntu1 [1598 kB]
130s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-12ubuntu1 [2596 kB]
130s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-12ubuntu1 [2500 kB]
130s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost1.83-dev arm64 1.83.0-4ubuntu1 [10.7 MB]
130s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost-dev arm64 1.83.0.2ubuntu1 [4468 B]
130s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
130s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
130s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
130s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
130s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
130s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
130s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB]
130s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-12ubuntu1 [437 kB]
130s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
130s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.1.0-1 [489 kB]
130s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
130s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
130s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
130s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
130s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB]
130s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
130s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
130s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
130s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.55.0+ds-3 [237 kB]
130s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.55.0+ds-3 [48.9 kB]
130s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.55.0+ds-3 [27.5 kB]
130s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB]
130s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB]
130s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB]
130s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
130s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [987 kB]
130s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
130s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB]
130s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
130s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
130s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
130s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.15-1 [774 kB]
131s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
131s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu1 [172 kB]
131s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
131s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB]
131s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.2-1 [28.4 MB]
132s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB]
132s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B]
132s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bh all 1.84.0-1 [5962 B]
132s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bigmemory.sri all 0.1.8-1 [13.4 kB]
132s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
132s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.13-1-1 [1973 kB]
132s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-uuid arm64 1.2-1-1 [48.7 kB]
132s Get:62 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-bigmemory arm64 4.6.4-1 [437 kB]
132s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB]
132s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.8.0-1 [395 kB]
132s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB]
132s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.4-1 [352 kB]
132s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB]
132s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB]
132s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB]
132s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB]
132s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB]
132s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB]
132s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.0-1 [111 kB]
132s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.4+dfsg-1 [244 kB]
132s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB]
132s Get:76 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB]
132s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.4-1 [1707 kB]
132s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
132s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
132s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.4-1 [212 kB]
132s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB]
132s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
132s Get:83 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB]
132s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB]
132s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-remotes all 2.5.0+dfsg-1 [447 kB]
132s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-1 [150 kB]
132s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.1.1-1 [1629 kB]
133s Preconfiguring packages ...
133s Fetched 76.9 MB in 4s (21.1 MB/s)
133s Selecting previously unselected package fonts-dejavu-mono.
133s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80185 files and directories currently installed.)
133s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ...
133s Unpacking fonts-dejavu-mono (2.37-8) ...
133s Selecting previously unselected package fonts-dejavu-core.
133s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ...
133s Unpacking fonts-dejavu-core (2.37-8) ...
133s Selecting previously unselected package fontconfig-config.
133s Preparing to unpack .../02-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ...
133s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
133s Selecting previously unselected package libfontconfig1:arm64.
133s Preparing to unpack .../03-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ...
133s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ...
133s Selecting previously unselected package fontconfig.
133s Preparing to unpack .../04-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ...
133s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
133s Selecting previously unselected package libasan8:arm64.
133s Preparing to unpack .../05-libasan8_14.2.0-12ubuntu1_arm64.deb ...
133s Unpacking libasan8:arm64 (14.2.0-12ubuntu1) ...
133s Selecting previously unselected package libblas3:arm64.
133s Preparing to unpack .../06-libblas3_3.12.0-4_arm64.deb ...
133s Unpacking libblas3:arm64 (3.12.0-4) ...
133s Selecting previously unselected package libgomp1:arm64.
133s Preparing to unpack .../07-libgomp1_14.2.0-12ubuntu1_arm64.deb ...
133s Unpacking libgomp1:arm64 (14.2.0-12ubuntu1) ...
133s Selecting previously unselected package libitm1:arm64.
133s Preparing to unpack .../08-libitm1_14.2.0-12ubuntu1_arm64.deb ...
133s Unpacking libitm1:arm64 (14.2.0-12ubuntu1) ...
134s Selecting previously unselected package liblsan0:arm64.
134s Preparing to unpack .../09-liblsan0_14.2.0-12ubuntu1_arm64.deb ...
134s Unpacking liblsan0:arm64 (14.2.0-12ubuntu1) ...
134s Selecting previously unselected package libtsan2:arm64.
134s Preparing to unpack .../10-libtsan2_14.2.0-12ubuntu1_arm64.deb ...
134s Unpacking libtsan2:arm64 (14.2.0-12ubuntu1) ...
134s Selecting previously unselected package libubsan1:arm64.
134s Preparing to unpack .../11-libubsan1_14.2.0-12ubuntu1_arm64.deb ...
134s Unpacking libubsan1:arm64 (14.2.0-12ubuntu1) ...
134s Selecting previously unselected package libhwasan0:arm64.
134s Preparing to unpack .../12-libhwasan0_14.2.0-12ubuntu1_arm64.deb ...
134s Unpacking libhwasan0:arm64 (14.2.0-12ubuntu1) ...
134s Selecting previously unselected package libgcc-14-dev:arm64.
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134s Selecting previously unselected package libboost1.83-dev:arm64.
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136s Selecting previously unselected package libice6:arm64.
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136s Selecting previously unselected package liblapack3:arm64.
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136s Selecting previously unselected package liblerc4:arm64.
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136s Selecting previously unselected package libpango-1.0-0:arm64.
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136s Selecting previously unselected package libpangoft2-1.0-0:arm64.
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137s Selecting previously unselected package libpangocairo-1.0-0:arm64.
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137s Selecting previously unselected package libpaper2:arm64.
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137s Selecting previously unselected package libsharpyuv0:arm64.
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137s Selecting previously unselected package libtiff6:arm64.
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137s Selecting previously unselected package libtk8.6:arm64.
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137s Selecting previously unselected package r-base-core.
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137s Unpacking r-base-core (4.4.2-1) ...
138s Selecting previously unselected package r-cran-littler.
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138s Unpacking r-cran-littler (0.3.20-2) ...
138s Selecting previously unselected package littler.
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138s Unpacking littler (0.3.20-2) ...
138s Selecting previously unselected package r-cran-bh.
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138s Unpacking r-cran-bh (1.84.0-1) ...
138s Selecting previously unselected package r-cran-bigmemory.sri.
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138s Unpacking r-cran-bigmemory.sri (0.1.8-1) ...
138s Selecting previously unselected package r-cran-pkgkitten.
138s Preparing to unpack .../58-r-cran-pkgkitten_0.2.4-1_all.deb ...
138s Unpacking r-cran-pkgkitten (0.2.4-1) ...
138s Selecting previously unselected package r-cran-rcpp.
138s Preparing to unpack .../59-r-cran-rcpp_1.0.13-1-1_arm64.deb ...
138s Unpacking r-cran-rcpp (1.0.13-1-1) ...
138s Selecting previously unselected package r-cran-uuid.
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138s Unpacking r-cran-uuid (1.2-1-1) ...
138s Selecting previously unselected package r-cran-bigmemory.
138s Preparing to unpack .../61-r-cran-bigmemory_4.6.4-1_arm64.deb ...
138s Unpacking r-cran-bigmemory (4.6.4-1) ...
138s Selecting previously unselected package r-cran-brio.
138s Preparing to unpack .../62-r-cran-brio_1.1.5-1_arm64.deb ...
138s Unpacking r-cran-brio (1.1.5-1) ...
138s Selecting previously unselected package r-cran-ps.
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138s Selecting previously unselected package r-cran-r6.
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138s Selecting previously unselected package r-cran-processx.
138s Preparing to unpack .../65-r-cran-processx_3.8.4-1_arm64.deb ...
138s Unpacking r-cran-processx (3.8.4-1) ...
138s Selecting previously unselected package r-cran-callr.
138s Preparing to unpack .../66-r-cran-callr_3.7.6-1_all.deb ...
138s Unpacking r-cran-callr (3.7.6-1) ...
138s Selecting previously unselected package r-cran-cli.
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138s Selecting previously unselected package r-cran-crayon.
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138s Selecting previously unselected package r-cran-diffobj.
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139s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
139s Setting up libpixman-1-0:arm64 (0.44.0-3) ...
139s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ...
139s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
139s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ...
139s Setting up libdatrie1:arm64 (0.2.13-3build1) ...
139s Setting up libxcb-render0:arm64 (1.17.0-2) ...
139s Setting up unzip (6.0-28ubuntu6) ...
139s Setting up x11-common (1:7.7+23ubuntu3) ...
140s Setting up libdeflate0:arm64 (1.22-1) ...
140s Setting up libxcb-shm0:arm64 (1.17.0-2) ...
140s Setting up libgomp1:arm64 (14.2.0-12ubuntu1) ...
140s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ...
140s Setting up zip (3.0-14ubuntu1) ...
140s Setting up libblas3:arm64 (3.12.0-4) ...
140s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
140s Setting up fonts-dejavu-mono (2.37-8) ...
140s Setting up libtcl8.6:arm64 (8.6.15+dfsg-2) ...
140s Setting up fonts-dejavu-core (2.37-8) ...
140s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
140s Setting up libgfortran5:arm64 (14.2.0-12ubuntu1) ...
140s Setting up libwebp7:arm64 (1.4.0-0.1) ...
140s Setting up libubsan1:arm64 (14.2.0-12ubuntu1) ...
140s Setting up libhwasan0:arm64 (14.2.0-12ubuntu1) ...
140s Setting up libasan8:arm64 (14.2.0-12ubuntu1) ...
140s Setting up libharfbuzz0b:arm64 (10.1.0-1) ...
140s Setting up libthai-data (0.1.29-2build1) ...
140s Setting up libxss1:arm64 (1:1.2.3-1build3) ...
140s Setting up libpaper2:arm64 (2.2.5-0.3) ...
140s Setting up libtsan2:arm64 (14.2.0-12ubuntu1) ...
140s Setting up xdg-utils (1.2.1-0ubuntu1) ...
140s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
140s Setting up liblsan0:arm64 (14.2.0-12ubuntu1) ...
140s Setting up libitm1:arm64 (14.2.0-12ubuntu1) ...
140s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
140s Setting up libice6:arm64 (2:1.1.1-1) ...
140s Setting up liblapack3:arm64 (3.12.0-4) ...
140s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
140s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ...
140s Setting up libpaper-utils (2.2.5-0.3) ...
140s Setting up libthai0:arm64 (0.1.29-2build1) ...
140s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
140s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ...
140s Setting up libgcc-14-dev:arm64 (14.2.0-12ubuntu1) ...
140s Setting up libstdc++-14-dev:arm64 (14.2.0-12ubuntu1) ...
140s Setting up libsm6:arm64 (2:1.2.4-1) ...
140s Setting up fontconfig (2.15.0-1.1ubuntu2) ...
142s Regenerating fonts cache... done.
142s Setting up libxft2:arm64 (2.3.6-1build1) ...
142s Setting up libboost1.83-dev:arm64 (1.83.0-4ubuntu1) ...
142s Setting up libtk8.6:arm64 (8.6.15-1) ...
142s Setting up libpango-1.0-0:arm64 (1.55.0+ds-3) ...
142s Setting up libcairo2:arm64 (1.18.2-2) ...
142s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ...
142s Setting up libboost-dev:arm64 (1.83.0.2ubuntu1) ...
142s Setting up libpangoft2-1.0-0:arm64 (1.55.0+ds-3) ...
142s Setting up libpangocairo-1.0-0:arm64 (1.55.0+ds-3) ...
142s Setting up r-base-core (4.4.2-1) ...
142s Creating config file /etc/R/Renviron with new version
142s Setting up r-cran-crayon (1.5.2-1) ...
142s Setting up r-cran-ps (1.8.0-1) ...
142s Setting up r-cran-remotes (2.5.0+dfsg-1) ...
142s Setting up r-cran-r6 (2.5.1-1) ...
142s Setting up r-cran-pkgkitten (0.2.4-1) ...
142s Setting up r-cran-magrittr (2.0.3-1) ...
142s Setting up r-cran-littler (0.3.20-2) ...
142s Setting up r-cran-bh (1.84.0-1) ...
142s Setting up r-cran-fs (1.6.4+dfsg-1) ...
142s Setting up r-cran-rcpp (1.0.13-1-1) ...
142s Setting up r-cran-brio (1.1.5-1) ...
142s Setting up r-cran-diffobj (0.3.5-1) ...
142s Setting up r-cran-bigmemory.sri (0.1.8-1) ...
142s Setting up r-cran-rlang (1.1.4-1) ...
142s Setting up littler (0.3.20-2) ...
142s Setting up r-cran-uuid (1.2-1-1) ...
142s Setting up r-cran-withr (3.0.2+dfsg-1) ...
142s Setting up r-cran-processx (3.8.4-1) ...
142s Setting up r-cran-praise (1.0.0-4build1) ...
142s Setting up r-cran-digest (0.6.37-1) ...
142s Setting up r-cran-evaluate (1.0.0-1) ...
142s Setting up r-cran-bigmemory (4.6.4-1) ...
142s Setting up r-cran-glue (1.8.0-1) ...
142s Setting up r-cran-cli (3.6.3-1) ...
142s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
142s Setting up r-cran-rprojroot (2.0.4-1) ...
142s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ...
142s Setting up r-cran-waldo (0.6.1-1) ...
142s Setting up r-cran-callr (3.7.6-1) ...
142s Setting up r-cran-desc (1.4.3-1) ...
142s Setting up r-cran-pkgbuild (1.4.4-1) ...
142s Setting up r-cran-pkgload (1.4.0-1) ...
142s Setting up r-cran-testthat (3.2.1.1-1) ...
142s Processing triggers for libc-bin (2.40-4ubuntu1) ...
142s Processing triggers for man-db (2.13.0-1) ...
144s Processing triggers for install-info (7.1.1-1) ...
145s autopkgtest [13:59:14]: test run-unit-test: [-----------------------
145s BEGIN TEST testthat.R
145s 
145s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
145s Copyright (C) 2024 The R Foundation for Statistical Computing
145s Platform: aarch64-unknown-linux-gnu
145s 
145s R is free software and comes with ABSOLUTELY NO WARRANTY.
145s You are welcome to redistribute it under certain conditions.
145s Type 'license()' or 'licence()' for distribution details.
145s 
145s R is a collaborative project with many contributors.
145s Type 'contributors()' for more information and
145s 'citation()' on how to cite R or R packages in publications.
145s 
145s Type 'demo()' for some demos, 'help()' for on-line help, or
145s 'help.start()' for an HTML browser interface to help.
145s Type 'q()' to quit R.
145s 
145s > library(testthat)
145s > library(bigmemory)
145s > 
145s > test_check("bigmemory")
149s [ FAIL 1 | WARN 104 | SKIP 7 | PASS 189 ]
149s 
149s ══ Skipped tests (7) ═══════════════════════════════════════════════════════════
149s • empty test (7): 'test_assignment.R:175:1', 'test_assignment.R:179:1',
149s   'test_assignment.R:183:1', 'test_assignment.R:187:1',
149s   'test_assignment.R:191:1', 'test_matrix_manips.R:3:1', 'test_mwhich.R:38:1'
149s 
149s ══ Failed tests ════════════════════════════════════════════════════════════════
149s ── Failure ('test_raw.R:31:3'): Making sure the 'char' matrix behaves like signed byte ──
149s mchar[1:3, 1] not equal to c(40, -123, NA).
149s 2/3 mismatches (average diff: NaN)
149s [2]  NA - -123 == NA
149s [3] 190 -   NA == NA
149s 
149s [ FAIL 1 | WARN 104 | SKIP 7 | PASS 189 ]
149s Error: Test failures
149s Execution halted
149s autopkgtest [13:59:18]: test run-unit-test: -----------------------]
150s autopkgtest [13:59:19]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
150s run-unit-test        FAIL non-zero exit status 1
150s autopkgtest [13:59:19]: test pkg-r-autopkgtest: preparing testbed
150s Reading package lists...
151s Building dependency tree...
151s Reading state information...
151s Starting pkgProblemResolver with broken count: 0
151s Starting 2 pkgProblemResolver with broken count: 0
151s Done
152s The following NEW packages will be installed:
152s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
152s   dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
152s   gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14
152s   gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools
152s   libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgfortran-14-dev libicu-dev
152s   libisl23 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev
152s   liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev
152s   libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev libtirpc-dev
152s   pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
152s 0 upgraded, 46 newly installed, 0 to remove and 0 not upgraded.
152s Need to get 77.3 MB of archives.
152s After this operation, 259 MB of additional disk space will be used.
152s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
152s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
152s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-12ubuntu1 [10.6 MB]
153s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-12ubuntu1 [1032 B]
153s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B]
153s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB]
153s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-12ubuntu1 [49.6 kB]
153s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-12ubuntu1 [20.9 MB]
153s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-12ubuntu1 [522 kB]
153s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B]
153s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B]
153s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-12ubuntu1 [12.1 MB]
154s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-12ubuntu1 [20.2 kB]
154s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B]
154s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B]
154s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
154s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB]
154s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-12ubuntu1 [498 kB]
154s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-12ubuntu1 [11.4 MB]
154s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-12ubuntu1 [13.1 kB]
154s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1022 B]
154s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.1.0-2ubuntu1 [1162 B]
154s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 74.2-1ubuntu4 [210 kB]
154s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.0-4 [120 kB]
154s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB]
154s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.22-1 [53.8 kB]
154s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 74.2-1ubuntu4 [11.9 MB]
154s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB]
154s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
154s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
154s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.0-4 [4419 kB]
154s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5-2 [385 kB]
154s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB]
154s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu3 [187 kB]
154s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu3 [6704 B]
154s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.42-4ubuntu3 [694 kB]
154s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB]
154s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
154s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.44-3 [270 kB]
154s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB]
154s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.3-1 [180 kB]
154s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB]
154s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB]
155s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB]
155s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.2-1 [4340 B]
155s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
155s Fetched 77.3 MB in 3s (27.0 MB/s)
155s Selecting previously unselected package libisl23:arm64.
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158s Setting up g++ (4:14.1.0-2ubuntu1) ...
158s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
158s Setting up build-essential (12.10ubuntu1) ...
158s Setting up gfortran (4:14.1.0-2ubuntu1) ...
158s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
158s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
158s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
158s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
158s Setting up r-base-dev (4.4.2-1) ...
158s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
158s Processing triggers for libc-bin (2.40-4ubuntu1) ...
158s Processing triggers for man-db (2.13.0-1) ...
159s Processing triggers for install-info (7.1.1-1) ...
161s autopkgtest [13:59:30]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
161s autopkgtest [13:59:30]: test pkg-r-autopkgtest: [-----------------------
161s Test: Try to load the R library bigmemory
161s 
161s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
161s Copyright (C) 2024 The R Foundation for Statistical Computing
161s Platform: aarch64-unknown-linux-gnu
161s 
161s R is free software and comes with ABSOLUTELY NO WARRANTY.
161s You are welcome to redistribute it under certain conditions.
161s Type 'license()' or 'licence()' for distribution details.
161s 
161s R is a collaborative project with many contributors.
161s Type 'contributors()' for more information and
161s 'citation()' on how to cite R or R packages in publications.
161s 
161s Type 'demo()' for some demos, 'help()' for on-line help, or
161s 'help.start()' for an HTML browser interface to help.
161s Type 'q()' to quit R.
161s 
161s > library('bigmemory')
161s > 
161s > 
161s Other tests are currently unsupported!
161s They will be progressively added.
161s autopkgtest [13:59:30]: test pkg-r-autopkgtest: -----------------------]
162s pkg-r-autopkgtest    PASS
162s autopkgtest [13:59:31]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
162s autopkgtest [13:59:31]: @@@@@@@@@@@@@@@@@@@@ summary
162s run-unit-test        FAIL non-zero exit status 1
162s pkg-r-autopkgtest    PASS
192s nova [W] Using flock in prodstack6-arm64
192s Creating nova instance adt-plucky-arm64-r-cran-bigmemory-20250109-135649-juju-7f2275-prod-proposed-migration-environment-20-a5db2688-8142-4dc6-a602-1f2f12057b75 from image adt/ubuntu-plucky-arm64-server-20250108.img (UUID 053f5e9f-d810-4aac-9e57-cf8ac63865d2)...
192s nova [W] Timed out waiting for f97212b6-83fb-4ea9-97f2-fb5d8267e48e to get deleted.