0s autopkgtest [17:07:33]: starting date and time: 2025-02-03 17:07:33+0000 0s autopkgtest [17:07:33]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [17:07:33]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.yh312zro/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-vegan --apt-upgrade r-cran-adegenet --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-vegan/2.6-10+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-11.secgroup --name adt-plucky-arm64-r-cran-adegenet-20250203-170733-juju-7f2275-prod-proposed-migration-environment-2-0d1208aa-78b0-4085-a957-afbee6b1f959 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 83s autopkgtest [17:08:56]: testbed dpkg architecture: arm64 83s autopkgtest [17:08:56]: testbed apt version: 2.9.18 84s autopkgtest [17:08:57]: @@@@@@@@@@@@@@@@@@@@ test bed setup 84s autopkgtest [17:08:57]: testbed release detected to be: None 85s autopkgtest [17:08:58]: updating testbed package index (apt update) 86s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 87s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 87s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 87s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 87s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.5 kB] 87s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [897 kB] 87s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.0 kB] 87s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 87s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [835 kB] 87s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4816 B] 88s Fetched 2050 kB in 2s (1051 kB/s) 88s Reading package lists... 90s Reading package lists... 90s Building dependency tree... 90s Reading state information... 90s Calculating upgrade... 91s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 91s Reading package lists... 91s Building dependency tree... 91s Reading state information... 92s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s autopkgtest [17:09:05]: upgrading testbed (apt dist-upgrade and autopurge) 92s Reading package lists... 92s Building dependency tree... 92s Reading state information... 93s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 93s Starting 2 pkgProblemResolver with broken count: 0 93s Done 93s Entering ResolveByKeep 94s 94s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 94s Reading package lists... 95s Building dependency tree... 95s Reading state information... 95s Starting pkgProblemResolver with broken count: 0 95s Starting 2 pkgProblemResolver with broken count: 0 95s Done 96s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 102s autopkgtest [17:09:15]: testbed running kernel: Linux 6.12.0-12-generic #12-Ubuntu SMP PREEMPT_DYNAMIC Thu Jan 23 07:24:57 UTC 2025 102s autopkgtest [17:09:15]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-adegenet 105s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (dsc) [2280 B] 105s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (tar) [1701 kB] 105s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (diff) [4872 B] 105s gpgv: Signature made Mon Jan 30 12:39:21 2023 UTC 105s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 105s gpgv: issuer "tille@debian.org" 105s gpgv: Can't check signature: No public key 105s dpkg-source: warning: cannot verify inline signature for ./r-cran-adegenet_2.1.10-1.dsc: no acceptable signature found 105s autopkgtest [17:09:18]: testing package r-cran-adegenet version 2.1.10-1 106s autopkgtest [17:09:19]: build not needed 111s autopkgtest [17:09:24]: test run-unit-test: preparing testbed 111s Reading package lists... 112s Building dependency tree... 112s Reading state information... 112s Starting pkgProblemResolver with broken count: 0 112s Starting 2 pkgProblemResolver with broken count: 0 112s Done 113s The following NEW packages will be installed: 113s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 113s fonts-font-awesome fonts-glyphicons-halflings javascript-common libamd3 113s libblas3 libcairo2 libcolamd3 libdatrie1 libdeflate0 libfontconfig1 113s libgfortran5 libglpk40 libgomp1 libgraphite2-3 libharfbuzz0b libice6 113s libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3 113s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 113s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-microplugin.js 113s libjs-popper.js libjs-sifter.js libjs-twitter-bootstrap-datepicker 113s liblapack3 liblerc4 libltdl7 libpango-1.0-0 libpangocairo-1.0-0 113s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 113s libsuitesparseconfig7 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 113s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 113s littler node-bootstrap-sass node-html5shiv node-normalize.css r-base-core 113s r-cran-ade4 r-cran-adegenet r-cran-ape r-cran-base64enc r-cran-boot 113s r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli 113s r-cran-cluster r-cran-colorspace r-cran-commonmark r-cran-cpp11 113s r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr 113s r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fontawesome 113s r-cran-fs r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable 113s r-cran-htmltools r-cran-httpuv r-cran-igraph r-cran-isoband r-cran-jquerylib 113s r-cran-jsonlite r-cran-labeling r-cran-later r-cran-lattice r-cran-lifecycle 113s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise 113s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-permute 113s r-cran-pillar r-cran-pixmap r-cran-pkgbuild r-cran-pkgconfig 113s r-cran-pkgkitten r-cran-pkgload r-cran-plyr r-cran-praise r-cran-processx 113s r-cran-promises r-cran-ps r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer 113s r-cran-rcpp r-cran-rcpparmadillo r-cran-reshape2 r-cran-rlang 113s r-cran-rprojroot r-cran-sass r-cran-scales r-cran-segmented r-cran-seqinr 113s r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-stringi r-cran-stringr 113s r-cran-testthat r-cran-tibble r-cran-tidyselect r-cran-utf8 r-cran-vctrs 113s r-cran-vegan r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xtable 113s unzip x11-common xdg-utils zip 113s 0 upgraded, 157 newly installed, 0 to remove and 0 not upgraded. 113s Need to get 125 MB of archives. 113s After this operation, 248 MB of additional disk space will be used. 113s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 114s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 114s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 114s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 114s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 114s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 114s Get:7 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 114s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 11+nmu1 [5936 B] 114s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-13ubuntu1 [145 kB] 114s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libsuitesparseconfig7 arm64 1:7.8.3+dfsg-2 [13.1 kB] 114s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd3 arm64 1:7.8.3+dfsg-2 [26.1 kB] 114s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB] 114s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 114s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 114s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 114s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 114s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 114s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolamd3 arm64 1:7.8.3+dfsg-2 [18.2 kB] 114s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 114s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 114s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-13ubuntu1 [437 kB] 114s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libltdl7 arm64 2.5.4-2.1 [42.9 kB] 114s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 libglpk40 arm64 5.0-1build2 [337 kB] 114s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 114s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 115s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 115s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 115s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 115s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 115s Get:30 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 115s Get:31 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 115s Get:32 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 115s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 115s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 115s Get:35 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 115s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 115s Get:37 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 115s Get:38 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 115s Get:39 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 115s Get:40 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 115s Get:41 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 115s Get:42 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 115s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB] 117s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 117s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 117s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 117s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.1-1 [238 kB] 117s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.1-1 [49.6 kB] 117s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.1-1 [27.6 kB] 117s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 117s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 117s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 117s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 117s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 119s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 119s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 120s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 120s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 121s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 121s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 122s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 123s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 124s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 125s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 125s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.2-1build1 [28.4 MB] 362s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 363s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 363s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 364s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 364s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 364s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-64-1 [1110 kB] 374s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pixmap all 0.4-13-1 [213 kB] 377s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 384s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sp arm64 1:2.1-4+dfsg-1 [1472 kB] 399s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 400s Get:76 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 414s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpparmadillo arm64 14.2.2-1-1 [843 kB] 424s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ade4 arm64 1.7-22-1 [5324 kB] 465s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.3-1 [1347 kB] 469s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 470s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB] 480s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 481s Get:83 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 481s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-2-1 [4153 kB] 516s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 516s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 522s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cpp11 all 0.5.1-1 [233 kB] 523s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-igraph arm64 2.1.4-1 [5150 kB] 563s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.167-1 [2311 kB] 576s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 578s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ape arm64 5.8-1-1 [2901 kB] 597s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 597s Get:93 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 598s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 598s Get:95 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 599s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 601s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 602s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.8.9+dfsg-1 [445 kB] 604s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 604s Ign:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 604s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 604s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 605s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 612s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 613s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 615s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 617s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB] 618s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 619s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 619s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 620s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 622s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 622s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 627s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 652s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 653s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 671s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 673s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 683s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 712s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 721s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 721s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 729s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 730s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 730s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 739s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 743s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 750s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 751s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 755s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 760s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 791s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-segmented all 2.1-3-1 [1366 kB] 801s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-seqinr arm64 4.2-36-1 [4013 kB] 830s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-boot all 1.3-31-1 [635 kB] 834s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plyr arm64 1.8.9-1 [831 kB] 839s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringi arm64 1.8.4-1build1 [902 kB] 846s Get:136 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 847s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-reshape2 arm64 1.4.4-2build1 [110 kB] 848s Get:138 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 848s Get:139 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 851s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 863s Get:141 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-permute all 0.9-7-1 [228 kB] 864s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cluster arm64 2.1.8-1 [568 kB] 867s Get:143 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 r-cran-vegan arm64 2.6-10+dfsg-1 [3137 kB] 885s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-adegenet arm64 2.1.10-1 [2708 kB] 899s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 900s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.8.1-1 [395 kB] 900s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.5-1 [354 kB] 904s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 907s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 909s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 918s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 919s Get:152 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 920s Get:153 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB] 920s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB] 922s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 922s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-1 [150 kB] 923s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.1.1-1 [1629 kB] 932s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 935s Preconfiguring packages ... 936s Fetched 124 MB in 13min 42s (151 kB/s) 936s Selecting previously unselected package fonts-dejavu-mono. 936s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116576 files and directories currently installed.) 936s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 936s Unpacking fonts-dejavu-mono (2.37-8) ... 936s Selecting previously unselected package fonts-dejavu-core. 936s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 936s Unpacking fonts-dejavu-core (2.37-8) ... 936s Selecting previously unselected package fontconfig-config. 936s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 936s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 936s Selecting previously unselected package libfontconfig1:arm64. 936s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 936s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 936s Selecting previously unselected package fontconfig. 936s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 936s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 936s Selecting previously unselected package fonts-font-awesome. 936s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 936s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 936s Selecting previously unselected package fonts-glyphicons-halflings. 936s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 936s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 936s Selecting previously unselected package javascript-common. 936s Preparing to unpack .../007-javascript-common_11+nmu1_all.deb ... 936s Unpacking javascript-common (11+nmu1) ... 937s Selecting previously unselected package libgomp1:arm64. 937s Preparing to unpack .../008-libgomp1_14.2.0-13ubuntu1_arm64.deb ... 937s Unpacking libgomp1:arm64 (14.2.0-13ubuntu1) ... 937s Selecting previously unselected package libsuitesparseconfig7:arm64. 937s Preparing to unpack .../009-libsuitesparseconfig7_1%3a7.8.3+dfsg-2_arm64.deb ... 937s Unpacking libsuitesparseconfig7:arm64 (1:7.8.3+dfsg-2) ... 937s Selecting previously unselected package libamd3:arm64. 937s Preparing to unpack .../010-libamd3_1%3a7.8.3+dfsg-2_arm64.deb ... 937s Unpacking libamd3:arm64 (1:7.8.3+dfsg-2) ... 937s Selecting previously unselected package libblas3:arm64. 937s Preparing to unpack .../011-libblas3_3.12.0-4_arm64.deb ... 937s Unpacking libblas3:arm64 (3.12.0-4) ... 937s Selecting previously unselected package libpixman-1-0:arm64. 937s Preparing to unpack .../012-libpixman-1-0_0.44.0-3_arm64.deb ... 937s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 937s Selecting previously unselected package libxcb-render0:arm64. 937s Preparing to unpack .../013-libxcb-render0_1.17.0-2_arm64.deb ... 937s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 937s Selecting previously unselected package libxcb-shm0:arm64. 937s Preparing to unpack .../014-libxcb-shm0_1.17.0-2_arm64.deb ... 937s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 937s Selecting previously unselected package libxrender1:arm64. 937s Preparing to unpack .../015-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 937s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 937s Selecting previously unselected package libcairo2:arm64. 937s Preparing to unpack .../016-libcairo2_1.18.2-2_arm64.deb ... 937s Unpacking libcairo2:arm64 (1.18.2-2) ... 937s Selecting previously unselected package libcolamd3:arm64. 937s Preparing to unpack .../017-libcolamd3_1%3a7.8.3+dfsg-2_arm64.deb ... 937s Unpacking libcolamd3:arm64 (1:7.8.3+dfsg-2) ... 937s Selecting previously unselected package libdatrie1:arm64. 937s Preparing to unpack .../018-libdatrie1_0.2.13-3build1_arm64.deb ... 937s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 937s Selecting previously unselected package libdeflate0:arm64. 937s Preparing to unpack .../019-libdeflate0_1.23-1_arm64.deb ... 937s Unpacking libdeflate0:arm64 (1.23-1) ... 937s Selecting previously unselected package libgfortran5:arm64. 937s Preparing to unpack .../020-libgfortran5_14.2.0-13ubuntu1_arm64.deb ... 937s Unpacking libgfortran5:arm64 (14.2.0-13ubuntu1) ... 937s Selecting previously unselected package libltdl7:arm64. 937s Preparing to unpack .../021-libltdl7_2.5.4-2.1_arm64.deb ... 937s Unpacking libltdl7:arm64 (2.5.4-2.1) ... 937s Selecting previously unselected package libglpk40:arm64. 937s Preparing to unpack .../022-libglpk40_5.0-1build2_arm64.deb ... 937s Unpacking libglpk40:arm64 (5.0-1build2) ... 937s Selecting previously unselected package libgraphite2-3:arm64. 937s Preparing to unpack .../023-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 937s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 937s Selecting previously unselected package libharfbuzz0b:arm64. 937s Preparing to unpack .../024-libharfbuzz0b_10.2.0-1_arm64.deb ... 937s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 937s Selecting previously unselected package x11-common. 937s Preparing to unpack .../025-x11-common_1%3a7.7+23ubuntu3_all.deb ... 937s Unpacking x11-common (1:7.7+23ubuntu3) ... 937s Selecting previously unselected package libice6:arm64. 937s Preparing to unpack .../026-libice6_2%3a1.1.1-1_arm64.deb ... 937s Unpacking libice6:arm64 (2:1.1.1-1) ... 937s Selecting previously unselected package libjpeg-turbo8:arm64. 937s Preparing to unpack .../027-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 937s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 937s Selecting previously unselected package libjpeg8:arm64. 937s Preparing to unpack .../028-libjpeg8_8c-2ubuntu11_arm64.deb ... 937s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 937s Selecting previously unselected package libjs-bootstrap. 937s Preparing to unpack .../029-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 937s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 937s Selecting previously unselected package libjs-popper.js. 937s Preparing to unpack .../030-libjs-popper.js_1.16.1+ds-6_all.deb ... 937s Unpacking libjs-popper.js (1.16.1+ds-6) ... 938s Selecting previously unselected package libjs-bootstrap4. 938s Preparing to unpack .../031-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 938s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 938s Selecting previously unselected package libjs-d3. 938s Preparing to unpack .../032-libjs-d3_3.5.17-4_all.deb ... 938s Unpacking libjs-d3 (3.5.17-4) ... 938s Selecting previously unselected package libjs-es5-shim. 938s Preparing to unpack .../033-libjs-es5-shim_4.6.7-2_all.deb ... 938s Unpacking libjs-es5-shim (4.6.7-2) ... 938s Selecting previously unselected package libjs-highlight.js. 938s Preparing to unpack .../034-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 938s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 938s Selecting previously unselected package libjs-jquery. 938s Preparing to unpack .../035-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 938s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 938s Selecting previously unselected package libjs-jquery-datatables. 938s Preparing to unpack .../036-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 938s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 938s Selecting previously unselected package libjs-sifter.js. 938s Preparing to unpack .../037-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 938s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 938s Selecting previously unselected package libjs-microplugin.js. 938s Preparing to unpack .../038-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 938s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 938s Selecting previously unselected package libjs-jquery-selectize.js. 938s Preparing to unpack .../039-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 938s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 938s Selecting previously unselected package libjs-jquery-ui. 938s Preparing to unpack .../040-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 938s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 938s Selecting previously unselected package libjs-json. 938s Preparing to unpack .../041-libjs-json_0~20221030+~1.0.8-1_all.deb ... 938s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 938s Selecting previously unselected package liblapack3:arm64. 938s Preparing to unpack .../042-liblapack3_3.12.0-4_arm64.deb ... 938s Unpacking liblapack3:arm64 (3.12.0-4) ... 938s Selecting previously unselected package liblerc4:arm64. 938s Preparing to unpack .../043-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 938s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 938s Selecting previously unselected package libthai-data. 938s Preparing to unpack .../044-libthai-data_0.1.29-2build1_all.deb ... 938s Unpacking libthai-data (0.1.29-2build1) ... 938s Selecting previously unselected package libthai0:arm64. 938s Preparing to unpack .../045-libthai0_0.1.29-2build1_arm64.deb ... 938s Unpacking libthai0:arm64 (0.1.29-2build1) ... 938s Selecting previously unselected package libpango-1.0-0:arm64. 938s Preparing to unpack .../046-libpango-1.0-0_1.56.1-1_arm64.deb ... 938s Unpacking libpango-1.0-0:arm64 (1.56.1-1) ... 938s Selecting previously unselected package libpangoft2-1.0-0:arm64. 938s Preparing to unpack .../047-libpangoft2-1.0-0_1.56.1-1_arm64.deb ... 938s Unpacking libpangoft2-1.0-0:arm64 (1.56.1-1) ... 938s Selecting previously unselected package libpangocairo-1.0-0:arm64. 938s Preparing to unpack .../048-libpangocairo-1.0-0_1.56.1-1_arm64.deb ... 938s Unpacking libpangocairo-1.0-0:arm64 (1.56.1-1) ... 938s Selecting previously unselected package libpaper2:arm64. 938s Preparing to unpack .../049-libpaper2_2.2.5-0.3_arm64.deb ... 938s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 938s Selecting previously unselected package libpaper-utils. 939s Preparing to unpack .../050-libpaper-utils_2.2.5-0.3_arm64.deb ... 939s Unpacking libpaper-utils (2.2.5-0.3) ... 939s Selecting previously unselected package libsharpyuv0:arm64. 939s Preparing to unpack .../051-libsharpyuv0_1.5.0-0.1_arm64.deb ... 939s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 939s Selecting previously unselected package libsm6:arm64. 939s Preparing to unpack .../052-libsm6_2%3a1.2.4-1_arm64.deb ... 939s Unpacking libsm6:arm64 (2:1.2.4-1) ... 939s Selecting previously unselected package libtcl8.6:arm64. 939s Preparing to unpack .../053-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 939s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 939s Selecting previously unselected package libjbig0:arm64. 939s Preparing to unpack .../054-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 939s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 939s Selecting previously unselected package libwebp7:arm64. 939s Preparing to unpack .../055-libwebp7_1.5.0-0.1_arm64.deb ... 939s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 939s Selecting previously unselected package libtiff6:arm64. 939s Preparing to unpack .../056-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 939s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 939s Selecting previously unselected package libxft2:arm64. 939s Preparing to unpack .../057-libxft2_2.3.6-1build1_arm64.deb ... 939s Unpacking libxft2:arm64 (2.3.6-1build1) ... 939s Selecting previously unselected package libxss1:arm64. 939s Preparing to unpack .../058-libxss1_1%3a1.2.3-1build3_arm64.deb ... 939s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 939s Selecting previously unselected package libtk8.6:arm64. 939s Preparing to unpack .../059-libtk8.6_8.6.16-1_arm64.deb ... 939s Unpacking libtk8.6:arm64 (8.6.16-1) ... 939s Selecting previously unselected package libxt6t64:arm64. 939s Preparing to unpack .../060-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 939s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 939s Selecting previously unselected package zip. 939s Preparing to unpack .../061-zip_3.0-14ubuntu2_arm64.deb ... 939s Unpacking zip (3.0-14ubuntu2) ... 939s Selecting previously unselected package unzip. 939s Preparing to unpack .../062-unzip_6.0-28ubuntu6_arm64.deb ... 939s Unpacking unzip (6.0-28ubuntu6) ... 939s Selecting previously unselected package xdg-utils. 939s Preparing to unpack .../063-xdg-utils_1.2.1-0ubuntu1_all.deb ... 939s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 939s Selecting previously unselected package r-base-core. 939s Preparing to unpack .../064-r-base-core_4.4.2-1build1_arm64.deb ... 939s Unpacking r-base-core (4.4.2-1build1) ... 940s Selecting previously unselected package r-cran-littler. 940s Preparing to unpack .../065-r-cran-littler_0.3.20-2_arm64.deb ... 940s Unpacking r-cran-littler (0.3.20-2) ... 940s Selecting previously unselected package littler. 940s Preparing to unpack .../066-littler_0.3.20-2_all.deb ... 940s Unpacking littler (0.3.20-2) ... 940s Selecting previously unselected package node-bootstrap-sass. 940s Preparing to unpack .../067-node-bootstrap-sass_3.4.3-2_all.deb ... 940s Unpacking node-bootstrap-sass (3.4.3-2) ... 940s Selecting previously unselected package node-html5shiv. 940s Preparing to unpack .../068-node-html5shiv_3.7.3+dfsg-5_all.deb ... 940s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 940s Selecting previously unselected package node-normalize.css. 940s Preparing to unpack .../069-node-normalize.css_8.0.1-5_all.deb ... 940s Unpacking node-normalize.css (8.0.1-5) ... 940s Selecting previously unselected package r-cran-mass. 940s Preparing to unpack .../070-r-cran-mass_7.3-64-1_arm64.deb ... 940s Unpacking r-cran-mass (7.3-64-1) ... 940s Selecting previously unselected package r-cran-pixmap. 940s Preparing to unpack .../071-r-cran-pixmap_0.4-13-1_all.deb ... 940s Unpacking r-cran-pixmap (0.4-13-1) ... 940s Selecting previously unselected package r-cran-lattice. 940s Preparing to unpack .../072-r-cran-lattice_0.22-6-1_arm64.deb ... 940s Unpacking r-cran-lattice (0.22-6-1) ... 940s Selecting previously unselected package r-cran-sp. 940s Preparing to unpack .../073-r-cran-sp_1%3a2.1-4+dfsg-1_arm64.deb ... 940s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 940s Selecting previously unselected package r-cran-pkgkitten. 940s Preparing to unpack .../074-r-cran-pkgkitten_0.2.4-1_all.deb ... 940s Unpacking r-cran-pkgkitten (0.2.4-1) ... 940s Selecting previously unselected package r-cran-rcpp. 940s Preparing to unpack .../075-r-cran-rcpp_1.0.14-1_arm64.deb ... 940s Unpacking r-cran-rcpp (1.0.14-1) ... 940s Selecting previously unselected package r-cran-rcpparmadillo. 940s Preparing to unpack .../076-r-cran-rcpparmadillo_14.2.2-1-1_arm64.deb ... 940s Unpacking r-cran-rcpparmadillo (14.2.2-1-1) ... 940s Selecting previously unselected package r-cran-ade4. 940s Preparing to unpack .../077-r-cran-ade4_1.7-22-1_arm64.deb ... 940s Unpacking r-cran-ade4 (1.7-22-1) ... 940s Selecting previously unselected package r-cran-cli. 940s Preparing to unpack .../078-r-cran-cli_3.6.3-1_arm64.deb ... 940s Unpacking r-cran-cli (3.6.3-1) ... 940s Selecting previously unselected package r-cran-glue. 940s Preparing to unpack .../079-r-cran-glue_1.8.0-1_arm64.deb ... 940s Unpacking r-cran-glue (1.8.0-1) ... 940s Selecting previously unselected package r-cran-rlang. 940s Preparing to unpack .../080-r-cran-rlang_1.1.5-1_arm64.deb ... 940s Unpacking r-cran-rlang (1.1.5-1) ... 941s Selecting previously unselected package r-cran-lifecycle. 941s Preparing to unpack .../081-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 941s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 941s Selecting previously unselected package r-cran-magrittr. 941s Preparing to unpack .../082-r-cran-magrittr_2.0.3-1_arm64.deb ... 941s Unpacking r-cran-magrittr (2.0.3-1) ... 941s Selecting previously unselected package r-cran-matrix. 941s Preparing to unpack .../083-r-cran-matrix_1.7-2-1_arm64.deb ... 941s Unpacking r-cran-matrix (1.7-2-1) ... 941s Selecting previously unselected package r-cran-pkgconfig. 941s Preparing to unpack .../084-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 941s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 941s Selecting previously unselected package r-cran-vctrs. 941s Preparing to unpack .../085-r-cran-vctrs_0.6.5-1_arm64.deb ... 941s Unpacking r-cran-vctrs (0.6.5-1) ... 941s Selecting previously unselected package r-cran-cpp11. 941s Preparing to unpack .../086-r-cran-cpp11_0.5.1-1_all.deb ... 941s Unpacking r-cran-cpp11 (0.5.1-1) ... 941s Selecting previously unselected package r-cran-igraph. 941s Preparing to unpack .../087-r-cran-igraph_2.1.4-1_arm64.deb ... 941s Unpacking r-cran-igraph (2.1.4-1) ... 941s Selecting previously unselected package r-cran-nlme. 941s Preparing to unpack .../088-r-cran-nlme_3.1.167-1_arm64.deb ... 941s Unpacking r-cran-nlme (3.1.167-1) ... 941s Selecting previously unselected package r-cran-digest. 941s Preparing to unpack .../089-r-cran-digest_0.6.37-1_arm64.deb ... 941s Unpacking r-cran-digest (0.6.37-1) ... 941s Selecting previously unselected package r-cran-ape. 941s Preparing to unpack .../090-r-cran-ape_5.8-1-1_arm64.deb ... 941s Unpacking r-cran-ape (5.8-1-1) ... 941s Selecting previously unselected package r-cran-later. 941s Preparing to unpack .../091-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 941s Unpacking r-cran-later (1.4.1+dfsg-1) ... 941s Selecting previously unselected package r-cran-fastmap. 941s Preparing to unpack .../092-r-cran-fastmap_1.2.0-1_arm64.deb ... 941s Unpacking r-cran-fastmap (1.2.0-1) ... 941s Selecting previously unselected package r-cran-r6. 941s Preparing to unpack .../093-r-cran-r6_2.5.1-1_all.deb ... 941s Unpacking r-cran-r6 (2.5.1-1) ... 941s Selecting previously unselected package r-cran-promises. 941s Preparing to unpack .../094-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 941s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 941s Selecting previously unselected package r-cran-httpuv. 941s Preparing to unpack .../095-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 941s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 941s Selecting previously unselected package r-cran-mime. 941s Preparing to unpack .../096-r-cran-mime_0.12-2_arm64.deb ... 941s Unpacking r-cran-mime (0.12-2) ... 941s Selecting previously unselected package r-cran-jsonlite. 941s Preparing to unpack .../097-r-cran-jsonlite_1.8.9+dfsg-1_arm64.deb ... 941s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 941s Selecting previously unselected package r-cran-xtable. 942s Preparing to unpack .../098-r-cran-xtable_1%3a1.8-4-2_all.deb ... 942s Unpacking r-cran-xtable (1:1.8-4-2) ... 942s Selecting previously unselected package r-cran-base64enc. 942s Preparing to unpack .../099-r-cran-base64enc_0.1-3-3_arm64.deb ... 942s Unpacking r-cran-base64enc (0.1-3-3) ... 942s Selecting previously unselected package r-cran-htmltools. 942s Preparing to unpack .../100-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 942s Unpacking r-cran-htmltools (0.5.8.1-1) ... 942s Selecting previously unselected package r-cran-fontawesome. 942s Preparing to unpack .../101-r-cran-fontawesome_0.5.3-1_all.deb ... 942s Unpacking r-cran-fontawesome (0.5.3-1) ... 942s Selecting previously unselected package r-cran-sourcetools. 942s Preparing to unpack .../102-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 942s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 942s Selecting previously unselected package r-cran-crayon. 942s Preparing to unpack .../103-r-cran-crayon_1.5.3-1_all.deb ... 942s Unpacking r-cran-crayon (1.5.3-1) ... 942s Selecting previously unselected package r-cran-withr. 942s Preparing to unpack .../104-r-cran-withr_3.0.2+dfsg-1_all.deb ... 942s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 942s Selecting previously unselected package r-cran-commonmark. 942s Preparing to unpack .../105-r-cran-commonmark_1.9.2-2_arm64.deb ... 942s Unpacking r-cran-commonmark (1.9.2-2) ... 942s Selecting previously unselected package r-cran-cachem. 942s Preparing to unpack .../106-r-cran-cachem_1.1.0-1_arm64.deb ... 942s Unpacking r-cran-cachem (1.1.0-1) ... 942s Selecting previously unselected package r-cran-jquerylib. 942s Preparing to unpack .../107-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 942s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 942s Selecting previously unselected package r-cran-memoise. 942s Preparing to unpack .../108-r-cran-memoise_2.0.1-1_all.deb ... 942s Unpacking r-cran-memoise (2.0.1-1) ... 942s Selecting previously unselected package r-cran-fs. 942s Preparing to unpack .../109-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 942s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 942s Selecting previously unselected package r-cran-rappdirs. 942s Preparing to unpack .../110-r-cran-rappdirs_0.3.3-1_arm64.deb ... 942s Unpacking r-cran-rappdirs (0.3.3-1) ... 942s Selecting previously unselected package r-cran-sass. 942s Preparing to unpack .../111-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 942s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 942s Selecting previously unselected package r-cran-bslib. 942s Preparing to unpack .../112-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 942s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 942s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 942s Preparing to unpack .../113-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 942s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 942s Selecting previously unselected package r-cran-shiny. 942s Preparing to unpack .../114-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 942s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 942s Selecting previously unselected package r-cran-gtable. 942s Preparing to unpack .../115-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 942s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 943s Selecting previously unselected package r-cran-isoband. 943s Preparing to unpack .../116-r-cran-isoband_0.2.7-1_arm64.deb ... 943s Unpacking r-cran-isoband (0.2.7-1) ... 943s Selecting previously unselected package r-cran-mgcv. 943s Preparing to unpack .../117-r-cran-mgcv_1.9-1-1_arm64.deb ... 943s Unpacking r-cran-mgcv (1.9-1-1) ... 943s Selecting previously unselected package r-cran-farver. 943s Preparing to unpack .../118-r-cran-farver_2.1.2-1_arm64.deb ... 943s Unpacking r-cran-farver (2.1.2-1) ... 943s Selecting previously unselected package r-cran-labeling. 943s Preparing to unpack .../119-r-cran-labeling_0.4.3-1_all.deb ... 943s Unpacking r-cran-labeling (0.4.3-1) ... 943s Selecting previously unselected package r-cran-colorspace. 943s Preparing to unpack .../120-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 943s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 943s Selecting previously unselected package r-cran-munsell. 943s Preparing to unpack .../121-r-cran-munsell_0.5.1-1_all.deb ... 943s Unpacking r-cran-munsell (0.5.1-1) ... 943s Selecting previously unselected package r-cran-rcolorbrewer. 943s Preparing to unpack .../122-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 943s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 943s Selecting previously unselected package r-cran-viridislite. 943s Preparing to unpack .../123-r-cran-viridislite_0.4.2-2_all.deb ... 943s Unpacking r-cran-viridislite (0.4.2-2) ... 943s Selecting previously unselected package r-cran-scales. 943s Preparing to unpack .../124-r-cran-scales_1.3.0-1_all.deb ... 943s Unpacking r-cran-scales (1.3.0-1) ... 943s Selecting previously unselected package r-cran-fansi. 943s Preparing to unpack .../125-r-cran-fansi_1.0.5-1_arm64.deb ... 943s Unpacking r-cran-fansi (1.0.5-1) ... 943s Selecting previously unselected package r-cran-utf8. 943s Preparing to unpack .../126-r-cran-utf8_1.2.4-1_arm64.deb ... 943s Unpacking r-cran-utf8 (1.2.4-1) ... 943s Selecting previously unselected package r-cran-pillar. 943s Preparing to unpack .../127-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 943s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 943s Selecting previously unselected package r-cran-tibble. 943s Preparing to unpack .../128-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 943s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 943s Selecting previously unselected package r-cran-ggplot2. 943s Preparing to unpack .../129-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 943s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 943s Selecting previously unselected package r-cran-segmented. 943s Preparing to unpack .../130-r-cran-segmented_2.1-3-1_all.deb ... 943s Unpacking r-cran-segmented (2.1-3-1) ... 943s Selecting previously unselected package r-cran-seqinr. 943s Preparing to unpack .../131-r-cran-seqinr_4.2-36-1_arm64.deb ... 943s Unpacking r-cran-seqinr (4.2-36-1) ... 943s Selecting previously unselected package r-cran-boot. 943s Preparing to unpack .../132-r-cran-boot_1.3-31-1_all.deb ... 943s Unpacking r-cran-boot (1.3-31-1) ... 943s Selecting previously unselected package r-cran-plyr. 944s Preparing to unpack .../133-r-cran-plyr_1.8.9-1_arm64.deb ... 944s Unpacking r-cran-plyr (1.8.9-1) ... 944s Selecting previously unselected package r-cran-stringi. 944s Preparing to unpack .../134-r-cran-stringi_1.8.4-1build1_arm64.deb ... 944s Unpacking r-cran-stringi (1.8.4-1build1) ... 944s Selecting previously unselected package r-cran-stringr. 944s Preparing to unpack .../135-r-cran-stringr_1.5.1-1_all.deb ... 944s Unpacking r-cran-stringr (1.5.1-1) ... 944s Selecting previously unselected package r-cran-reshape2. 944s Preparing to unpack .../136-r-cran-reshape2_1.4.4-2build1_arm64.deb ... 944s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 944s Selecting previously unselected package r-cran-generics. 944s Preparing to unpack .../137-r-cran-generics_0.1.3-1_all.deb ... 944s Unpacking r-cran-generics (0.1.3-1) ... 944s Selecting previously unselected package r-cran-tidyselect. 944s Preparing to unpack .../138-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 944s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 944s Selecting previously unselected package r-cran-dplyr. 944s Preparing to unpack .../139-r-cran-dplyr_1.1.4-4_arm64.deb ... 944s Unpacking r-cran-dplyr (1.1.4-4) ... 944s Selecting previously unselected package r-cran-permute. 944s Preparing to unpack .../140-r-cran-permute_0.9-7-1_all.deb ... 944s Unpacking r-cran-permute (0.9-7-1) ... 944s Selecting previously unselected package r-cran-cluster. 944s Preparing to unpack .../141-r-cran-cluster_2.1.8-1_arm64.deb ... 944s Unpacking r-cran-cluster (2.1.8-1) ... 944s Selecting previously unselected package r-cran-vegan. 944s Preparing to unpack .../142-r-cran-vegan_2.6-10+dfsg-1_arm64.deb ... 944s Unpacking r-cran-vegan (2.6-10+dfsg-1) ... 944s Selecting previously unselected package r-cran-adegenet. 944s Preparing to unpack .../143-r-cran-adegenet_2.1.10-1_arm64.deb ... 944s Unpacking r-cran-adegenet (2.1.10-1) ... 944s Selecting previously unselected package r-cran-brio. 944s Preparing to unpack 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previously unselected package r-cran-testthat. 945s Preparing to unpack .../156-r-cran-testthat_3.2.1.1-1_arm64.deb ... 945s Unpacking r-cran-testthat (3.2.1.1-1) ... 945s Setting up libjs-json (0~20221030+~1.0.8-1) ... 945s Setting up javascript-common (11+nmu1) ... 945s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 945s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 945s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 945s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 945s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 945s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 945s Setting up libjs-popper.js (1.16.1+ds-6) ... 945s Setting up libxcb-render0:arm64 (1.17.0-2) ... 945s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 945s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 945s Setting up unzip (6.0-28ubuntu6) ... 945s Setting up x11-common (1:7.7+23ubuntu3) ... 945s Setting up node-html5shiv (3.7.3+dfsg-5) ... 945s Setting up libdeflate0:arm64 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r-cran-pkgbuild (1.4.6-1) ... 948s Setting up r-cran-dplyr (1.1.4-4) ... 948s Setting up r-cran-pkgload (1.4.0-1) ... 948s Setting up r-cran-seqinr (4.2-36-1) ... 948s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 948s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 948s Setting up r-cran-testthat (3.2.1.1-1) ... 948s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 948s Setting up r-cran-shiny (1.9.1+dfsg-1) ... 948s Setting up r-cran-adegenet (2.1.10-1) ... 948s Processing triggers for libc-bin (2.40-4ubuntu1) ... 948s Processing triggers for man-db (2.13.0-1) ... 950s Processing triggers for install-info (7.1.1-1) ... 951s autopkgtest [17:23:24]: test run-unit-test: [----------------------- 951s 951s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 951s Copyright (C) 2024 The R Foundation for Statistical Computing 951s Platform: aarch64-unknown-linux-gnu 951s 951s R is free software and comes with ABSOLUTELY NO WARRANTY. 951s You are welcome to redistribute it under certain conditions. 951s Type 'license()' or 'licence()' for distribution details. 951s 951s R is a collaborative project with many contributors. 951s Type 'contributors()' for more information and 951s 'citation()' on how to cite R or R packages in publications. 951s 951s Type 'demo()' for some demos, 'help()' for on-line help, or 951s 'help.start()' for an HTML browser interface to help. 951s Type 'q()' to quit R. 951s 951s > library(testthat) 952s > suppressPackageStartupMessages(library(adegenet)) 954s > test_check("adegenet") 954s 954s Converting data from a genind to a genpop object... 954s 954s ...done. 954s 955s [ FAIL 0 | WARN 47 | SKIP 39 | PASS 13 ] 955s 955s == Skipped tests (39) ========================================================== 956s * On CRAN (39): 'test-findclust.R:4:3', 'test-prop.R:13:3', 956s 'test-seppop.R:6:3', 'test-seppop.R:14:3', 'test-seppop.R:23:3', 956s 'test-seppop.R:33:3', 'test-seppop.R:56:3', 'test-seppop.R:65:3', 956s 'test-seppop.R:75:3', 'test_compoplot.R:6:3', 'test_compoplot.R:11:3', 956s 'test_compoplot.R:16:3', 'test_compoplot.R:21:3', 'test_compoplot.R:26:3', 956s 'test_constructors.R:4:3', 'test_constructors.R:11:3', 'test_genlight.R:5:3', 956s 'test_genlight.R:18:3', 'test_genlight.R:35:3', 'test_genlight.R:42:3', 956s 'test_genlight.R:68:3', 'test_genlight.R:79:3', 'test_genlight.R:90:3', 956s 'test_genlight.R:96:3', 'test_genlight.R:104:3', 'test_hierarchy.R:4:3', 956s 'test_hierarchy.R:27:3', 'test_hierarchy.R:38:3', 'test_repool.R:7:3', 956s 'test_snapclust.R:5:5', 'test_snapclust.R:31:5', 'test_snapclust.R:65:3', 956s 'test_snapclust.R:78:3', 'test_snapclust.R:88:3', 'test_subset.R:6:3', 956s 'test_subset.R:14:3', 'test_summary.R:4:3', 'test_xval.R:15:3', 956s 'test_xval.R:26:3' 956s 956s [ FAIL 0 | WARN 47 | SKIP 39 | PASS 13 ] 956s > 956s autopkgtest [17:23:29]: test run-unit-test: -----------------------] 957s autopkgtest [17:23:30]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 957s run-unit-test PASS 958s autopkgtest [17:23:31]: test pkg-r-autopkgtest: preparing testbed 958s Reading package lists... 959s Building dependency tree... 959s Reading state information... 959s Starting pkgProblemResolver with broken count: 0 959s Starting 2 pkgProblemResolver with broken count: 0 959s Done 960s The following NEW packages will be installed: 960s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 960s dctrl-tools g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 960s gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gdal-data gdal-plugins 960s gfortran gfortran-14 gfortran-14-aarch64-linux-gnu 960s gfortran-aarch64-linux-gnu icu-devtools libabsl20230802 libaec0 libaom3 960s libarmadillo14 libarpack2t64 libasan8 libavif16 libblas-dev libblosc1 960s libbz2-dev libcc1-0 libcfitsio10t64 libdav1d7 libde265-0 libdeflate-dev 960s libfreexl1 libfyba0t64 libgav1-1 libgcc-14-dev libgdal36 libgeos-c1t64 960s libgeos3.13.0 libgeotiff5 libgfortran-14-dev libgif7 libgpgmepp6t64 960s libhdf4-0-alt libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec 960s libheif-plugin-libde265 libheif1 libhwasan0 libicu-dev libisl23 libitm1 960s libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev libkmlbase1t64 libkmldom1t64 960s libkmlengine1t64 liblapack-dev liblcms2-2 liblsan0 liblzma-dev 960s libminizip1t64 libmpc3 libmysqlclient24 libncurses-dev libnetcdf19t64 960s libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7 libpcre2-16-0 libpcre2-32-0 960s libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libpoppler145 libpq5 960s libproj25 libqhull-r8.0 librav1e0.7 libreadline-dev librttopo1 libsnappy1v5 960s libspatialite8t64 libstdc++-14-dev libsvtav1enc2 libsz2 libtirpc-dev 960s libtsan2 libubsan1 libudunits2-0 libudunits2-data liburiparser1 960s libxerces-c3.2t64 libyuv0 mysql-common pkg-r-autopkgtest pkgconf pkgconf-bin 960s proj-data r-base-dev r-cran-class r-cran-classint r-cran-dbi r-cran-deldir 960s r-cran-e1071 r-cran-interp r-cran-kernsmooth r-cran-maps r-cran-proxy 960s r-cran-rcppeigen r-cran-s2 r-cran-sf r-cran-spdata r-cran-spdep r-cran-units 960s r-cran-wk unixodbc-common zlib1g-dev 960s 0 upgraded, 126 newly installed, 0 to remove and 0 not upgraded. 960s Need to get 149 MB of archives. 960s After this operation, 502 MB of additional disk space will be used. 960s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 962s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 962s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [10.6 MB] 965s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-13ubuntu1 [1030 B] 965s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B] 965s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB] 965s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-13ubuntu1 [49.6 kB] 965s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-13ubuntu1 [27.8 kB] 965s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-13ubuntu1 [2893 kB] 966s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-13ubuntu1 [1283 kB] 966s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-13ubuntu1 [2686 kB] 967s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-13ubuntu1 [1152 kB] 967s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-13ubuntu1 [1598 kB] 967s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-13ubuntu1 [2596 kB] 968s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [20.9 MB] 972s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-13ubuntu1 [523 kB] 973s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B] 973s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B] 973s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-13ubuntu1 [2502 kB] 973s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [12.1 MB] 975s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-13ubuntu1 [21.1 kB] 975s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B] 975s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B] 975s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 975s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 975s Get:26 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-data all 3.10.1+dfsg-1build2 [269 kB] 975s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 gdal-plugins arm64 3.10.1+dfsg-1build2 [25.6 kB] 975s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-13ubuntu1 [498 kB] 975s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-13ubuntu1 [11.4 MB] 977s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-13ubuntu1 [13.2 kB] 977s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1022 B] 977s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.1.0-2ubuntu1 [1162 B] 977s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 977s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libabsl20230802 arm64 20230802.1-4ubuntu2 [487 kB] 977s Get:35 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 977s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libaom3 arm64 3.11.0-1 [1837 kB] 978s Get:37 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarpack2t64 arm64 3.9.1-4 [94.4 kB] 978s Get:38 http://ftpmaster.internal/ubuntu plucky/universe arm64 libarmadillo14 arm64 1:14.2.1+dfsg-1 [104 kB] 978s Get:39 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdav1d7 arm64 1.5.1-1 [304 kB] 978s Get:40 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgav1-1 arm64 0.19.0-3 [572 kB] 978s Get:41 http://ftpmaster.internal/ubuntu plucky/universe arm64 librav1e0.7 arm64 0.7.1-9 [763 kB] 978s Get:42 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsvtav1enc2 arm64 2.3.0+dfsg-1 [1832 kB] 978s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libyuv0 arm64 0.0.1899.20250103-1 [158 kB] 978s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 libavif16 arm64 1.1.1-1ubuntu1 [94.6 kB] 978s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.0-4 [120 kB] 978s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 978s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 libblosc1 arm64 1.21.5+ds-1build1 [25.7 kB] 978s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 978s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcfitsio10t64 arm64 4.5.0-5 [519 kB] 978s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libde265-0 arm64 1.0.15-1build4 [146 kB] 978s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 978s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfyba0t64 arm64 4.1.1-11build1 [120 kB] 978s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [23.1 kB] 978s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfreexl1 arm64 2.0.0-1build2 [41.9 kB] 978s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos3.13.0 arm64 3.13.0-1 [918 kB] 978s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeos-c1t64 arm64 3.13.0-1 [92.6 kB] 978s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 proj-data all 9.5.1-1 [7924 kB] 979s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 libproj25 arm64 9.5.1-1 [1342 kB] 979s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeotiff5 arm64 1.7.3-1 [60.8 kB] 979s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 979s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 979s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf4-0-alt arm64 4.3.0-1 [271 kB] 979s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-310 arm64 1.14.5+repack-3 [1331 kB] 979s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-aomdec arm64 1.19.5-1build1 [11.4 kB] 979s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif-plugin-libde265 arm64 1.19.5-1build1 [8902 B] 979s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libheif1 arm64 1.19.5-1build1 [369 kB] 979s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB] 979s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlbase1t64 arm64 1.3.0-12build1 [47.8 kB] 979s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmldom1t64 arm64 1.3.0-12build1 [146 kB] 979s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 libkmlengine1t64 arm64 1.3.0-12build1 [68.1 kB] 979s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 mysql-common all 5.8+1.1.1 [6800 B] 979s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libmysqlclient24 arm64 8.4.4-0ubuntu1 [1243 kB] 980s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [59.8 kB] 980s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnetcdf19t64 arm64 1:4.9.2-6ubuntu2 [471 kB] 980s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbc2 arm64 2.3.12-2ubuntu1 [147 kB] 980s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 unixodbc-common all 2.3.12-2ubuntu1 [9044 B] 980s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libodbcinst2 arm64 2.3.12-2ubuntu1 [30.3 kB] 980s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 libogdi4.1 arm64 4.1.1+ds-5 [217 kB] 980s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu3 [182 kB] 980s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libgpgmepp6t64 arm64 1.24.1-2ubuntu1 [119 kB] 980s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB] 980s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libpoppler145 arm64 25.01.0-2 [1139 kB] 980s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libpq5 arm64 17.2-1build2 [141 kB] 980s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB] 980s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 librttopo1 arm64 1.1.0-3build2 [187 kB] 980s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 libspatialite8t64 arm64 5.1.0-3build1 [1814 kB] 980s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3build1 [874 kB] 980s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgdal36 arm64 3.10.1+dfsg-1build2 [8895 kB] 981s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 982s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 982s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 982s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 982s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.0-4 [4419 kB] 982s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5-2 [385 kB] 982s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB] 982s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu3 [187 kB] 982s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu3 [6704 B] 982s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.42-4ubuntu3 [694 kB] 982s Get:99 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 982s Get:100 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 982s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.44-3 [270 kB] 982s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 983s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-data all 2.2.28-7build1 [19.4 kB] 983s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 libudunits2-0 arm64 2.2.28-7build1 [52.8 kB] 983s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.3-1 [180 kB] 983s Get:106 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 983s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 983s Get:108 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 983s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.2-1build1 [4342 B] 983s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 983s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB] 983s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 983s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-e1071 arm64 1.7-16-1 [563 kB] 983s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-kernsmooth arm64 2.23-26-1 [93.3 kB] 983s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-classint arm64 0.4-11+dfsg-1 [108 kB] 983s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB] 983s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 983s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 984s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-interp arm64 1.1-6-1 [1433 kB] 984s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-maps arm64 3.4.2-1 [2362 kB] 985s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-wk arm64 0.9.4-1 [1790 kB] 987s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-s2 arm64 1.1.7-1 [1987 kB] 1000s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-units arm64 0.8-5+dfsg-1 [270 kB] 1001s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sf arm64 1.0-19+dfsg-1 [3247 kB] 1023s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spdata all 2.3.1-1 [3757 kB] 1045s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-spdep arm64 1.3-5+dfsg-1 [2168 kB] 1060s Fetched 149 MB in 1min 40s (1495 kB/s) 1061s Selecting previously unselected package libisl23:arm64. 1061s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 130828 files and directories currently installed.) 1061s Preparing to unpack .../000-libisl23_0.27-1_arm64.deb ... 1061s Unpacking libisl23:arm64 (0.27-1) ... 1061s Selecting previously unselected package libmpc3:arm64. 1061s Preparing to unpack .../001-libmpc3_1.3.1-1build2_arm64.deb ... 1061s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 1061s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 1061s Preparing to unpack .../002-cpp-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 1061s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1061s Selecting previously unselected package cpp-14. 1061s Preparing to unpack .../003-cpp-14_14.2.0-13ubuntu1_arm64.deb ... 1061s Unpacking cpp-14 (14.2.0-13ubuntu1) ... 1061s Selecting previously unselected package cpp-aarch64-linux-gnu. 1061s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 1061s Unpacking cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1061s Selecting previously unselected package cpp. 1061s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_arm64.deb ... 1061s Unpacking cpp (4:14.1.0-2ubuntu1) ... 1061s Selecting previously unselected package libcc1-0:arm64. 1061s Preparing to unpack .../006-libcc1-0_14.2.0-13ubuntu1_arm64.deb ... 1061s Unpacking libcc1-0:arm64 (14.2.0-13ubuntu1) ... 1061s Selecting previously unselected package libitm1:arm64. 1061s Preparing to unpack .../007-libitm1_14.2.0-13ubuntu1_arm64.deb ... 1061s Unpacking libitm1:arm64 (14.2.0-13ubuntu1) ... 1061s Selecting previously unselected package libasan8:arm64. 1061s Preparing to unpack .../008-libasan8_14.2.0-13ubuntu1_arm64.deb ... 1061s Unpacking libasan8:arm64 (14.2.0-13ubuntu1) ... 1061s Selecting previously unselected package liblsan0:arm64. 1061s Preparing to unpack .../009-liblsan0_14.2.0-13ubuntu1_arm64.deb ... 1061s Unpacking liblsan0:arm64 (14.2.0-13ubuntu1) ... 1061s Selecting previously unselected package libtsan2:arm64. 1061s Preparing to unpack .../010-libtsan2_14.2.0-13ubuntu1_arm64.deb ... 1061s Unpacking libtsan2:arm64 (14.2.0-13ubuntu1) ... 1062s Selecting previously unselected package libubsan1:arm64. 1062s Preparing to unpack .../011-libubsan1_14.2.0-13ubuntu1_arm64.deb ... 1062s Unpacking libubsan1:arm64 (14.2.0-13ubuntu1) ... 1062s Selecting previously unselected package libhwasan0:arm64. 1062s Preparing to unpack .../012-libhwasan0_14.2.0-13ubuntu1_arm64.deb ... 1062s Unpacking libhwasan0:arm64 (14.2.0-13ubuntu1) ... 1062s Selecting previously unselected package libgcc-14-dev:arm64. 1062s Preparing to unpack .../013-libgcc-14-dev_14.2.0-13ubuntu1_arm64.deb ... 1062s Unpacking libgcc-14-dev:arm64 (14.2.0-13ubuntu1) ... 1062s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 1062s Preparing to unpack .../014-gcc-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 1062s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1062s Selecting previously unselected package gcc-14. 1062s Preparing to unpack .../015-gcc-14_14.2.0-13ubuntu1_arm64.deb ... 1062s Unpacking gcc-14 (14.2.0-13ubuntu1) ... 1062s Selecting previously unselected package gcc-aarch64-linux-gnu. 1062s Preparing to unpack .../016-gcc-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 1062s Unpacking gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1062s Selecting previously unselected package gcc. 1062s Preparing to unpack .../017-gcc_4%3a14.1.0-2ubuntu1_arm64.deb ... 1062s Unpacking gcc (4:14.1.0-2ubuntu1) ... 1062s Selecting previously unselected package libstdc++-14-dev:arm64. 1062s Preparing to unpack .../018-libstdc++-14-dev_14.2.0-13ubuntu1_arm64.deb ... 1062s Unpacking libstdc++-14-dev:arm64 (14.2.0-13ubuntu1) ... 1063s Selecting previously unselected package g++-14-aarch64-linux-gnu. 1063s Preparing to unpack .../019-g++-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 1063s Unpacking g++-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1063s Selecting previously unselected package g++-14. 1063s Preparing to unpack .../020-g++-14_14.2.0-13ubuntu1_arm64.deb ... 1063s Unpacking g++-14 (14.2.0-13ubuntu1) ... 1063s Selecting previously unselected package g++-aarch64-linux-gnu. 1063s Preparing to unpack .../021-g++-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 1063s Unpacking g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1063s Selecting previously unselected package g++. 1063s Preparing to unpack .../022-g++_4%3a14.1.0-2ubuntu1_arm64.deb ... 1063s Unpacking g++ (4:14.1.0-2ubuntu1) ... 1063s Selecting previously unselected package build-essential. 1063s Preparing to unpack .../023-build-essential_12.10ubuntu1_arm64.deb ... 1063s Unpacking build-essential (12.10ubuntu1) ... 1063s Selecting previously unselected package dctrl-tools. 1063s Preparing to unpack .../024-dctrl-tools_2.24-3build3_arm64.deb ... 1063s Unpacking dctrl-tools (2.24-3build3) ... 1063s Selecting previously unselected package gdal-data. 1063s Preparing to unpack .../025-gdal-data_3.10.1+dfsg-1build2_all.deb ... 1063s Unpacking gdal-data (3.10.1+dfsg-1build2) ... 1063s Selecting previously unselected package gdal-plugins:arm64. 1063s Preparing to unpack .../026-gdal-plugins_3.10.1+dfsg-1build2_arm64.deb ... 1063s Unpacking gdal-plugins:arm64 (3.10.1+dfsg-1build2) ... 1063s Selecting previously unselected package libgfortran-14-dev:arm64. 1063s Preparing to unpack .../027-libgfortran-14-dev_14.2.0-13ubuntu1_arm64.deb ... 1063s Unpacking libgfortran-14-dev:arm64 (14.2.0-13ubuntu1) ... 1063s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 1063s Preparing to unpack .../028-gfortran-14-aarch64-linux-gnu_14.2.0-13ubuntu1_arm64.deb ... 1063s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-13ubuntu1) ... 1064s Selecting previously unselected package gfortran-14. 1064s Preparing to unpack .../029-gfortran-14_14.2.0-13ubuntu1_arm64.deb ... 1064s Unpacking gfortran-14 (14.2.0-13ubuntu1) ... 1064s Selecting previously unselected package gfortran-aarch64-linux-gnu. 1064s Preparing to unpack .../030-gfortran-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 1064s Unpacking gfortran-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 1064s Selecting previously unselected package gfortran. 1064s Preparing to unpack .../031-gfortran_4%3a14.1.0-2ubuntu1_arm64.deb ... 1064s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 1064s Selecting previously unselected package icu-devtools. 1064s Preparing to unpack .../032-icu-devtools_76.1-1ubuntu2_arm64.deb ... 1064s Unpacking icu-devtools (76.1-1ubuntu2) ... 1064s Selecting previously unselected package libabsl20230802:arm64. 1064s Preparing to unpack .../033-libabsl20230802_20230802.1-4ubuntu2_arm64.deb ... 1064s Unpacking libabsl20230802:arm64 (20230802.1-4ubuntu2) ... 1064s Selecting previously unselected package libaec0:arm64. 1064s Preparing to unpack .../034-libaec0_1.1.3-1_arm64.deb ... 1064s Unpacking libaec0:arm64 (1.1.3-1) ... 1064s Selecting previously unselected package libaom3:arm64. 1064s Preparing to unpack .../035-libaom3_3.11.0-1_arm64.deb ... 1064s Unpacking libaom3:arm64 (3.11.0-1) ... 1064s Selecting previously unselected package libarpack2t64:arm64. 1064s Preparing to unpack .../036-libarpack2t64_3.9.1-4_arm64.deb ... 1064s Unpacking libarpack2t64:arm64 (3.9.1-4) ... 1064s Selecting previously unselected package libarmadillo14. 1064s Preparing to unpack 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libyuv0:arm64 (0.0.1899.20250103-1) ... 1064s Selecting previously unselected package libavif16:arm64. 1065s Preparing to unpack .../043-libavif16_1.1.1-1ubuntu1_arm64.deb ... 1065s Unpacking libavif16:arm64 (1.1.1-1ubuntu1) ... 1065s Selecting previously unselected package libblas-dev:arm64. 1065s Preparing to unpack .../044-libblas-dev_3.12.0-4_arm64.deb ... 1065s Unpacking libblas-dev:arm64 (3.12.0-4) ... 1065s Selecting previously unselected package libsnappy1v5:arm64. 1065s Preparing to unpack .../045-libsnappy1v5_1.2.1-1_arm64.deb ... 1065s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 1065s Selecting previously unselected package libblosc1:arm64. 1065s Preparing to unpack .../046-libblosc1_1.21.5+ds-1build1_arm64.deb ... 1065s Unpacking libblosc1:arm64 (1.21.5+ds-1build1) ... 1065s Selecting previously unselected package libbz2-dev:arm64. 1065s Preparing to unpack .../047-libbz2-dev_1.0.8-6_arm64.deb ... 1065s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 1065s Selecting previously unselected package libcfitsio10t64:arm64. 1065s Preparing to unpack .../048-libcfitsio10t64_4.5.0-5_arm64.deb ... 1065s Unpacking libcfitsio10t64:arm64 (4.5.0-5) ... 1065s Selecting previously unselected package libde265-0:arm64. 1065s Preparing to unpack .../049-libde265-0_1.0.15-1build4_arm64.deb ... 1065s Unpacking libde265-0:arm64 (1.0.15-1build4) ... 1065s Selecting previously unselected package libdeflate-dev:arm64. 1065s Preparing to unpack .../050-libdeflate-dev_1.23-1_arm64.deb ... 1065s Unpacking libdeflate-dev:arm64 (1.23-1) ... 1065s Selecting previously unselected package libfyba0t64:arm64. 1065s Preparing to unpack .../051-libfyba0t64_4.1.1-11build1_arm64.deb ... 1065s Unpacking libfyba0t64:arm64 (4.1.1-11build1) ... 1065s Selecting previously unselected package libminizip1t64:arm64. 1065s Preparing to unpack .../052-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 1065s Unpacking libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1065s Selecting previously unselected package libfreexl1:arm64. 1065s Preparing to unpack .../053-libfreexl1_2.0.0-1build2_arm64.deb ... 1065s Unpacking libfreexl1:arm64 (2.0.0-1build2) ... 1065s Selecting previously unselected package libgeos3.13.0:arm64. 1065s Preparing to unpack .../054-libgeos3.13.0_3.13.0-1_arm64.deb ... 1065s Unpacking libgeos3.13.0:arm64 (3.13.0-1) ... 1065s Selecting previously unselected package libgeos-c1t64:arm64. 1065s Preparing to unpack .../055-libgeos-c1t64_3.13.0-1_arm64.deb ... 1065s Unpacking libgeos-c1t64:arm64 (3.13.0-1) ... 1065s Selecting previously unselected package proj-data. 1065s Preparing to unpack .../056-proj-data_9.5.1-1_all.deb ... 1065s Unpacking proj-data (9.5.1-1) ... 1065s Selecting previously unselected package libproj25:arm64. 1065s Preparing to unpack .../057-libproj25_9.5.1-1_arm64.deb ... 1065s Unpacking libproj25:arm64 (9.5.1-1) ... 1065s Selecting previously unselected package libgeotiff5:arm64. 1065s Preparing to unpack .../058-libgeotiff5_1.7.3-1_arm64.deb ... 1065s Unpacking libgeotiff5:arm64 (1.7.3-1) ... 1065s Selecting previously unselected package libgif7:arm64. 1065s Preparing to unpack .../059-libgif7_5.2.2-1ubuntu1_arm64.deb ... 1065s Unpacking libgif7:arm64 (5.2.2-1ubuntu1) ... 1065s Selecting previously unselected package libsz2:arm64. 1066s Preparing to unpack .../060-libsz2_1.1.3-1_arm64.deb ... 1066s Unpacking libsz2:arm64 (1.1.3-1) ... 1066s Selecting previously unselected package libhdf4-0-alt:arm64. 1066s Preparing to unpack .../061-libhdf4-0-alt_4.3.0-1_arm64.deb ... 1066s Unpacking libhdf4-0-alt:arm64 (4.3.0-1) ... 1066s Selecting previously unselected package libhdf5-310:arm64. 1066s Preparing to unpack .../062-libhdf5-310_1.14.5+repack-3_arm64.deb ... 1066s Unpacking libhdf5-310:arm64 (1.14.5+repack-3) ... 1066s Selecting previously unselected package libheif-plugin-aomdec:arm64. 1066s Preparing to unpack .../063-libheif-plugin-aomdec_1.19.5-1build1_arm64.deb ... 1066s Unpacking libheif-plugin-aomdec:arm64 (1.19.5-1build1) ... 1066s Selecting previously unselected package libheif-plugin-libde265:arm64. 1066s Preparing to unpack .../064-libheif-plugin-libde265_1.19.5-1build1_arm64.deb ... 1066s Unpacking libheif-plugin-libde265:arm64 (1.19.5-1build1) ... 1066s Selecting previously unselected package libheif1:arm64. 1066s Preparing to unpack .../065-libheif1_1.19.5-1build1_arm64.deb ... 1066s Unpacking libheif1:arm64 (1.19.5-1build1) ... 1066s Selecting previously unselected package liburiparser1:arm64. 1066s Preparing to unpack .../066-liburiparser1_0.9.8+dfsg-2_arm64.deb ... 1066s Unpacking liburiparser1:arm64 (0.9.8+dfsg-2) ... 1066s Selecting previously unselected package libkmlbase1t64:arm64. 1066s Preparing to unpack .../067-libkmlbase1t64_1.3.0-12build1_arm64.deb ... 1066s Unpacking libkmlbase1t64:arm64 (1.3.0-12build1) ... 1066s Selecting previously unselected package libkmldom1t64:arm64. 1066s Preparing to unpack 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unpack .../073-libnetcdf19t64_1%3a4.9.2-6ubuntu2_arm64.deb ... 1066s Unpacking libnetcdf19t64:arm64 (1:4.9.2-6ubuntu2) ... 1066s Selecting previously unselected package libodbc2:arm64. 1066s Preparing to unpack .../074-libodbc2_2.3.12-2ubuntu1_arm64.deb ... 1066s Unpacking libodbc2:arm64 (2.3.12-2ubuntu1) ... 1066s Selecting previously unselected package unixodbc-common. 1066s Preparing to unpack .../075-unixodbc-common_2.3.12-2ubuntu1_all.deb ... 1066s Unpacking unixodbc-common (2.3.12-2ubuntu1) ... 1066s Selecting previously unselected package libodbcinst2:arm64. 1066s Preparing to unpack .../076-libodbcinst2_2.3.12-2ubuntu1_arm64.deb ... 1066s Unpacking libodbcinst2:arm64 (2.3.12-2ubuntu1) ... 1066s Selecting previously unselected package libogdi4.1:arm64. 1066s Preparing to unpack .../077-libogdi4.1_4.1.1+ds-5_arm64.deb ... 1066s Unpacking libogdi4.1:arm64 (4.1.1+ds-5) ... 1066s Selecting previously unselected package libopenjp2-7:arm64. 1066s Preparing to unpack .../078-libopenjp2-7_2.5.0-2ubuntu3_arm64.deb ... 1066s Unpacking libopenjp2-7:arm64 (2.5.0-2ubuntu3) ... 1066s Selecting previously unselected package libgpgmepp6t64:arm64. 1066s Preparing to unpack .../079-libgpgmepp6t64_1.24.1-2ubuntu1_arm64.deb ... 1066s Unpacking libgpgmepp6t64:arm64 (1.24.1-2ubuntu1) ... 1066s Selecting previously unselected package liblcms2-2:arm64. 1066s Preparing to unpack .../080-liblcms2-2_2.16-2_arm64.deb ... 1066s Unpacking liblcms2-2:arm64 (2.16-2) ... 1067s Selecting previously unselected package libpoppler145:arm64. 1067s Preparing to unpack .../081-libpoppler145_25.01.0-2_arm64.deb ... 1067s Unpacking libpoppler145:arm64 (25.01.0-2) ... 1067s Selecting previously unselected package libpq5:arm64. 1067s Preparing to unpack .../082-libpq5_17.2-1build2_arm64.deb ... 1067s Unpacking libpq5:arm64 (17.2-1build2) ... 1067s Selecting previously unselected package libqhull-r8.0:arm64. 1067s Preparing to unpack .../083-libqhull-r8.0_2020.2-6build1_arm64.deb ... 1067s Unpacking libqhull-r8.0:arm64 (2020.2-6build1) ... 1067s Selecting previously unselected package librttopo1:arm64. 1067s Preparing to unpack .../084-librttopo1_1.1.0-3build2_arm64.deb ... 1067s Unpacking librttopo1:arm64 (1.1.0-3build2) ... 1067s Selecting previously unselected package libspatialite8t64:arm64. 1067s Preparing to unpack .../085-libspatialite8t64_5.1.0-3build1_arm64.deb ... 1067s Unpacking libspatialite8t64:arm64 (5.1.0-3build1) ... 1067s Selecting previously unselected package libxerces-c3.2t64:arm64. 1067s Preparing to unpack .../086-libxerces-c3.2t64_3.2.4+debian-1.3build1_arm64.deb ... 1067s Unpacking libxerces-c3.2t64:arm64 (3.2.4+debian-1.3build1) ... 1067s Selecting previously unselected package libgdal36:arm64. 1067s Preparing to unpack .../087-libgdal36_3.10.1+dfsg-1build2_arm64.deb ... 1067s Unpacking libgdal36:arm64 (3.10.1+dfsg-1build2) ... 1067s Selecting previously unselected package libicu-dev:arm64. 1067s Preparing to unpack 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.../093-libncurses-dev_6.5-2_arm64.deb ... 1068s Unpacking libncurses-dev:arm64 (6.5-2) ... 1068s Selecting previously unselected package libpcre2-16-0:arm64. 1068s Preparing to unpack .../094-libpcre2-16-0_10.42-4ubuntu3_arm64.deb ... 1068s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu3) ... 1068s Selecting previously unselected package libpcre2-32-0:arm64. 1068s Preparing to unpack .../095-libpcre2-32-0_10.42-4ubuntu3_arm64.deb ... 1068s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu3) ... 1068s Selecting previously unselected package libpcre2-posix3:arm64. 1068s Preparing to unpack .../096-libpcre2-posix3_10.42-4ubuntu3_arm64.deb ... 1068s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu3) ... 1068s Selecting previously unselected package libpcre2-dev:arm64. 1068s Preparing to unpack .../097-libpcre2-dev_10.42-4ubuntu3_arm64.deb ... 1068s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu3) ... 1068s Selecting previously unselected package libpkgconf3:arm64. 1068s Preparing to unpack .../098-libpkgconf3_1.8.1-4_arm64.deb ... 1068s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 1068s Selecting previously unselected package zlib1g-dev:arm64. 1068s Preparing to unpack .../099-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 1068s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1068s Selecting previously unselected package libpng-dev:arm64. 1068s Preparing to unpack .../100-libpng-dev_1.6.44-3_arm64.deb ... 1068s Unpacking libpng-dev:arm64 (1.6.44-3) ... 1068s Selecting previously unselected package libreadline-dev:arm64. 1068s Preparing to unpack .../101-libreadline-dev_8.2-6_arm64.deb ... 1068s Unpacking libreadline-dev:arm64 (8.2-6) ... 1068s Selecting previously unselected package libudunits2-data. 1068s Preparing to unpack .../102-libudunits2-data_2.2.28-7build1_all.deb ... 1068s Unpacking libudunits2-data (2.2.28-7build1) ... 1068s Selecting previously unselected package libudunits2-0. 1068s Preparing to unpack .../103-libudunits2-0_2.2.28-7build1_arm64.deb ... 1068s Unpacking libudunits2-0 (2.2.28-7build1) ... 1068s Selecting previously unselected package liblzma-dev:arm64. 1068s Preparing to unpack .../104-liblzma-dev_5.6.3-1_arm64.deb ... 1068s Unpacking liblzma-dev:arm64 (5.6.3-1) ... 1068s Selecting previously unselected package pkgconf-bin. 1069s Preparing to unpack .../105-pkgconf-bin_1.8.1-4_arm64.deb ... 1069s Unpacking pkgconf-bin (1.8.1-4) ... 1069s Selecting previously unselected package pkgconf:arm64. 1069s Preparing to unpack .../106-pkgconf_1.8.1-4_arm64.deb ... 1069s Unpacking pkgconf:arm64 (1.8.1-4) ... 1069s Selecting previously unselected package libtirpc-dev:arm64. 1069s Preparing to unpack .../107-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 1069s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 1069s Selecting previously unselected package r-base-dev. 1069s Preparing to unpack .../108-r-base-dev_4.4.2-1build1_all.deb ... 1069s Unpacking r-base-dev (4.4.2-1build1) ... 1069s Selecting previously unselected package pkg-r-autopkgtest. 1069s Preparing to unpack .../109-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 1069s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 1069s Selecting previously unselected package r-cran-class. 1069s Preparing to unpack .../110-r-cran-class_7.3-23-1_arm64.deb ... 1069s Unpacking r-cran-class (7.3-23-1) ... 1069s Selecting previously unselected package r-cran-proxy. 1069s Preparing to unpack .../111-r-cran-proxy_0.4-27-1_arm64.deb ... 1069s Unpacking r-cran-proxy (0.4-27-1) ... 1069s Selecting previously unselected package r-cran-e1071. 1069s Preparing to unpack .../112-r-cran-e1071_1.7-16-1_arm64.deb ... 1069s Unpacking r-cran-e1071 (1.7-16-1) ... 1069s Selecting previously unselected package r-cran-kernsmooth. 1069s Preparing to unpack .../113-r-cran-kernsmooth_2.23-26-1_arm64.deb ... 1069s Unpacking r-cran-kernsmooth (2.23-26-1) ... 1069s Selecting previously unselected package r-cran-classint. 1069s Preparing to unpack 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Selecting previously unselected package r-cran-wk. 1069s Preparing to unpack .../120-r-cran-wk_0.9.4-1_arm64.deb ... 1069s Unpacking r-cran-wk (0.9.4-1) ... 1069s Selecting previously unselected package r-cran-s2. 1069s Preparing to unpack .../121-r-cran-s2_1.1.7-1_arm64.deb ... 1069s Unpacking r-cran-s2 (1.1.7-1) ... 1069s Selecting previously unselected package r-cran-units. 1070s Preparing to unpack .../122-r-cran-units_0.8-5+dfsg-1_arm64.deb ... 1070s Unpacking r-cran-units (0.8-5+dfsg-1) ... 1070s Selecting previously unselected package r-cran-sf. 1070s Preparing to unpack .../123-r-cran-sf_1.0-19+dfsg-1_arm64.deb ... 1070s Unpacking r-cran-sf (1.0-19+dfsg-1) ... 1070s Selecting previously unselected package r-cran-spdata. 1070s Preparing to unpack .../124-r-cran-spdata_2.3.1-1_all.deb ... 1070s Unpacking r-cran-spdata (2.3.1-1) ... 1070s Selecting previously unselected package r-cran-spdep. 1070s Preparing to unpack .../125-r-cran-spdep_1.3-5+dfsg-1_arm64.deb ... 1070s Unpacking r-cran-spdep (1.3-5+dfsg-1) ... 1070s Setting up liblcms2-2:arm64 (2.16-2) ... 1070s Setting up libgpgmepp6t64:arm64 (1.24.1-2ubuntu1) ... 1070s Setting up libaom3:arm64 (3.11.0-1) ... 1070s Setting up mysql-common (5.8+1.1.1) ... 1070s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode 1070s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 1070s Setting up r-cran-maps (3.4.2-1) ... 1070s Setting up libncurses-dev:arm64 (6.5-2) ... 1070s Setting up libarpack2t64:arm64 (3.9.1-4) ... 1070s Setting up proj-data (9.5.1-1) ... 1070s Setting up r-cran-class (7.3-23-1) ... 1070s Setting up libproj25:arm64 (9.5.1-1) ... 1070s Setting up libogdi4.1:arm64 (4.1.1+ds-5) ... 1070s Setting up libgeos3.13.0:arm64 (3.13.0-1) ... 1070s Setting up r-cran-dbi (1.2.3-1) ... 1070s Setting up libpq5:arm64 (17.2-1build2) ... 1070s Setting up libqhull-r8.0:arm64 (2020.2-6build1) ... 1070s Setting up libreadline-dev:arm64 (8.2-6) ... 1070s Setting 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/usr/bin/f95 (f95) in auto mode 1070s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 1070s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 1070s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 1070s Setting up r-base-dev (4.4.2-1build1) ... 1070s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 1070s Setting up libheif1:arm64 (1.19.5-1build1) ... 1070s Setting up libgdal36:arm64 (3.10.1+dfsg-1build2) ... 1070s Setting up r-cran-sf (1.0-19+dfsg-1) ... 1070s Setting up r-cran-spdep (1.3-5+dfsg-1) ... 1070s Setting up libheif-plugin-aomdec:arm64 (1.19.5-1build1) ... 1070s Setting up libheif-plugin-libde265:arm64 (1.19.5-1build1) ... 1070s Processing triggers for libc-bin (2.40-4ubuntu1) ... 1070s Processing triggers for man-db (2.13.0-1) ... 1071s Processing triggers for install-info (7.1.1-1) ... 1072s autopkgtest [17:25:25]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1072s autopkgtest [17:25:25]: test pkg-r-autopkgtest: [----------------------- 1073s Test: Try to load the R library adegenet 1073s 1073s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 1073s Copyright (C) 2024 The R Foundation for Statistical Computing 1073s Platform: aarch64-unknown-linux-gnu 1073s 1073s R is free software and comes with ABSOLUTELY NO WARRANTY. 1073s You are welcome to redistribute it under certain conditions. 1073s Type 'license()' or 'licence()' for distribution details. 1073s 1073s R is a collaborative project with many contributors. 1073s Type 'contributors()' for more information and 1073s 'citation()' on how to cite R or R packages in publications. 1073s 1073s Type 'demo()' for some demos, 'help()' for on-line help, or 1073s 'help.start()' for an HTML browser interface to help. 1073s Type 'q()' to quit R. 1073s 1073s > library('adegenet') 1073s Loading required package: ade4 1076s 1076s /// adegenet 2.1.10 is loaded //////////// 1076s 1076s > overview: '?adegenet' 1076s > tutorials/doc/questions: 'adegenetWeb()' 1076s > bug reports/feature requests: adegenetIssues() 1076s 1076s 1076s > 1076s > 1076s Other tests are currently unsupported! 1076s They will be progressively added. 1076s autopkgtest [17:25:29]: test pkg-r-autopkgtest: -----------------------] 1077s autopkgtest [17:25:30]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1077s pkg-r-autopkgtest PASS 1077s autopkgtest [17:25:30]: @@@@@@@@@@@@@@@@@@@@ summary 1077s run-unit-test PASS 1077s pkg-r-autopkgtest PASS 1084s nova [W] Using flock in prodstack6-arm64 1084s Creating nova instance adt-plucky-arm64-r-cran-adegenet-20250203-170733-juju-7f2275-prod-proposed-migration-environment-2-0d1208aa-78b0-4085-a957-afbee6b1f959 from image adt/ubuntu-plucky-arm64-server-20250203.img (UUID fb7ca42f-38bc-45ee-b928-9b9fb089de0d)... 1084s nova [W] Timed out waiting for ba657e3c-c0af-47e6-b20e-4a94e3301276 to get deleted.