0s autopkgtest [15:10:28]: starting date and time: 2025-03-15 15:10:28+0000 0s autopkgtest [15:10:28]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:10:28]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.h821t1ze/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-scran --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-19.secgroup --name adt-plucky-arm64-r-bioc-scran-20250315-151028-juju-7f2275-prod-proposed-migration-environment-15-c22cdbe3-4b01-4d18-88be-5130575126fa --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 144s autopkgtest [15:12:52]: testbed dpkg architecture: arm64 144s autopkgtest [15:12:52]: testbed apt version: 2.9.33 145s autopkgtest [15:12:53]: @@@@@@@@@@@@@@@@@@@@ test bed setup 145s autopkgtest [15:12:53]: testbed release detected to be: None 147s autopkgtest [15:12:55]: updating testbed package index (apt update) 147s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 148s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 148s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 148s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 148s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 148s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 148s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 148s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [78.2 kB] 149s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1976 B] 149s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 149s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [346 kB] 149s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [15.8 kB] 149s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 149s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [572 B] 149s Fetched 1094 kB in 2s (728 kB/s) 150s Reading package lists... 151s + lsb_release --codename --short 151s + RELEASE=plucky 151s + cat 151s + [ plucky != trusty ] 151s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Calculating upgrade... 152s Calculating upgrade... 152s The following packages will be upgraded: 152s python3-jinja2 strace 152s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 152s Need to get 608 kB of archives. 152s After this operation, 11.3 kB of additional disk space will be used. 152s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 153s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 153s Fetched 608 kB in 1s (665 kB/s) 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 154s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 154s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 154s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 154s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 154s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 154s Setting up strace (6.13+ds-1ubuntu1) ... 154s Processing triggers for man-db (2.13.0-1) ... 155s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 155s + /usr/lib/apt/apt-helper analyze-pattern ?true 155s + uname -r 155s + sed s/\./\\./g 155s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.* 155s + apt list ?obsolete 155s + tail -n+2 155s + cut -d/ -f1 155s + grep -v ^linux-.*6\.14\.0-10-generic.* 155s + obsolete_pkgs=linux-headers-6.11.0-8-generic 155s linux-headers-6.11.0-8 155s linux-image-6.11.0-8-generic 155s linux-modules-6.11.0-8-generic 155s linux-tools-6.11.0-8-generic 155s linux-tools-6.11.0-8 155s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 155s Reading package lists... 155s Building dependency tree... 155s Reading state information... 156s Solving dependencies... 156s The following packages will be REMOVED: 156s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 156s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 156s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 156s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 157s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 157s After this operation, 267 MB disk space will be freed. 157s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 157s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 157s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 157s Removing libpython3.12t64:arm64 (3.12.9-1) ... 157s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 157s Removing libnsl2:arm64 (1.3.0-3build3) ... 157s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 157s Removing libunwind8:arm64 (1.6.2-3.1) ... 157s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 157s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 159s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 159s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 159s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 159s /etc/kernel/postrm.d/initramfs-tools: 159s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 159s /etc/kernel/postrm.d/zz-flash-kernel: 159s flash-kernel: Kernel 6.11.0-8-generic has been removed. 159s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 159s /etc/kernel/postrm.d/zz-update-grub: 159s Sourcing file `/etc/default/grub' 159s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 159s Generating grub configuration file ... 160s Found linux image: /boot/vmlinuz-6.14.0-10-generic 160s Found initrd image: /boot/initrd.img-6.14.0-10-generic 160s Warning: os-prober will not be executed to detect other bootable partitions. 160s Systems on them will not be added to the GRUB boot configuration. 160s Check GRUB_DISABLE_OS_PROBER documentation entry. 160s Adding boot menu entry for UEFI Firmware Settings ... 160s done 160s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 160s Processing triggers for libc-bin (2.41-1ubuntu1) ... 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 160s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 160s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 160s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 161s + grep -q trusty /etc/lsb-release 161s + [ ! -d /usr/share/doc/unattended-upgrades ] 161s + [ ! -d /usr/share/doc/lxd ] 161s + [ ! -d /usr/share/doc/lxd-client ] 161s + [ ! -d /usr/share/doc/snapd ] 161s + type iptables 161s + cat 161s + chmod 755 /etc/rc.local 161s + . /etc/rc.local 161s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 161s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 161s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 161s + uname -m 161s + [ aarch64 = ppc64le ] 161s + [ -d /run/systemd/system ] 161s + systemd-detect-virt --quiet --vm 161s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 161s + cat 161s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 161s + echo COMPRESS=lz4 161s autopkgtest [15:13:09]: upgrading testbed (apt dist-upgrade and autopurge) 161s Reading package lists... 161s Building dependency tree... 161s Reading state information... 162s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 162s Starting 2 pkgProblemResolver with broken count: 0 162s Done 163s Entering ResolveByKeep 163s 163s Calculating upgrade... 163s The following packages will be upgraded: 163s libc-bin libc-dev-bin libc6 libc6-dev locales 164s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 164s Need to get 9530 kB of archives. 164s After this operation, 0 B of additional disk space will be used. 164s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 165s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 166s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 168s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 169s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 173s Preconfiguring packages ... 173s Fetched 9530 kB in 9s (1030 kB/s) 173s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 173s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 173s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 173s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 173s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 173s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 174s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 174s Setting up libc6:arm64 (2.41-1ubuntu2) ... 174s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 174s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 174s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 174s Setting up libc-bin (2.41-1ubuntu2) ... 174s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 174s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 174s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 174s Setting up locales (2.41-1ubuntu2) ... 175s Generating locales (this might take a while)... 177s en_US.UTF-8... done 177s Generation complete. 177s Setting up libc-dev-bin (2.41-1ubuntu2) ... 177s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 177s Processing triggers for man-db (2.13.0-1) ... 178s Processing triggers for systemd (257.3-1ubuntu3) ... 179s Reading package lists... 179s Building dependency tree... 179s Reading state information... 179s Starting pkgProblemResolver with broken count: 0 180s Starting 2 pkgProblemResolver with broken count: 0 180s Done 180s Solving dependencies... 180s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 180s autopkgtest [15:13:28]: rebooting testbed after setup commands that affected boot 205s autopkgtest [15:13:53]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 209s autopkgtest [15:13:57]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-scran 233s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-scran 1.34.0+dfsg-3 (dsc) [2491 B] 233s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-scran 1.34.0+dfsg-3 (tar) [450 kB] 233s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-scran 1.34.0+dfsg-3 (diff) [4184 B] 233s gpgv: Signature made Tue Jan 21 13:17:21 2025 UTC 233s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 233s gpgv: issuer "crusoe@debian.org" 233s gpgv: Can't check signature: No public key 233s dpkg-source: warning: cannot verify inline signature for ./r-bioc-scran_1.34.0+dfsg-3.dsc: no acceptable signature found 236s autopkgtest [15:14:24]: testing package r-bioc-scran version 1.34.0+dfsg-3 738s autopkgtest [15:22:46]: build not needed 796s autopkgtest [15:23:44]: test pkg-r-autopkgtest: preparing testbed 796s Reading package lists... 797s Building dependency tree... 797s Reading state information... 797s Starting pkgProblemResolver with broken count: 0 797s Starting 2 pkgProblemResolver with broken count: 0 797s Done 798s The following NEW packages will be installed: 798s build-essential comerr-dev cpp cpp-14 cpp-14-aarch64-linux-gnu 798s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 798s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 798s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-14 798s g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 798s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 798s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu hdf5-helpers 798s icu-devtools javascript-common krb5-multidev libaec-dev libaec0 libamd3 798s libasan8 libbibtex-parser-perl libblas-dev libblas3 libblosc1 libboost-dev 798s libboost1.83-dev libbrotli-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 798s libcurl4-openssl-dev libdatrie1 libdeflate-dev libdeflate0 libevent-2.1-7t64 798s libfontconfig1 libgcc-14-dev libgfortran-14-dev libgfortran5 libglpk40 798s libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 798s libgnutls28-dev libgomp1 libgraphite2-3 libgssrpc4t64 libharfbuzz0b 798s libhdf5-310 libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310 798s libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libhnswlib-dev libhwasan0 libice6 798s libicu-dev libidn2-dev libio-string-perl libisl23 libitm1 libjbig0 798s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 798s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 798s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 798s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 798s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 798s libjs-twitter-bootstrap-datepicker libkadm5clnt-mit12 libkadm5srv-mit12 798s libkdb5-10t64 libkpathsea6 libkrb5-dev liblapack-dev liblapack3 798s liblatex-tounicode-perl libldap-dev liblerc4 liblsan0 libltdl7 liblua5.4-0 798s liblzma-dev libmpc3 libmpfi0 libncurses-dev libnghttp2-dev libp11-kit-dev 798s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 798s libpaper2 libpcg-cpp-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev 798s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl-dev 798s libptexenc1 libreadline-dev librtmp-dev libsharpyuv0 libsm6 libsnappy1v5 798s libssh2-1-dev libssl-dev libstdc++-14-dev libsuitesparseconfig7 libsynctex2 798s libsz2 libtasn1-6-dev libtcl8.6 libteckit0 libtexlua53-5 libthai-data 798s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libunbound8 798s libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 798s libxrender1 libxss1 libxt6t64 libzstd-dev libzzip-0-13t64 littler nettle-dev 798s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 798s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 798s r-bioc-alabaster.base r-bioc-alabaster.matrix r-bioc-alabaster.ranges 798s r-bioc-alabaster.sce r-bioc-alabaster.schemas r-bioc-alabaster.se 798s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-annotationhub 798s r-bioc-assorthead r-bioc-beachmat r-bioc-biobase r-bioc-biocfilecache 798s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocneighbors r-bioc-biocparallel 798s r-bioc-biocsingular r-bioc-biocstyle r-bioc-biocversion r-bioc-biostrings 798s r-bioc-bluster r-bioc-delayedarray r-bioc-delayedmatrixstats r-bioc-deseq2 798s r-bioc-edger r-bioc-ensembldb r-bioc-experimenthub r-bioc-genomeinfodb 798s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 798s r-bioc-genomicranges r-bioc-gypsum r-bioc-hdf5array r-bioc-iranges 798s r-bioc-keggrest r-bioc-limma r-bioc-matrixgenerics r-bioc-metapod 798s r-bioc-protgenerics r-bioc-residualmatrix r-bioc-rhdf5 r-bioc-rhdf5filters 798s r-bioc-rhdf5lib r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 798s r-bioc-s4arrays r-bioc-s4vectors r-bioc-scaledmatrix r-bioc-scater 798s r-bioc-scran r-bioc-scrnaseq r-bioc-scuttle r-bioc-singlecellexperiment 798s r-bioc-sparsearray r-bioc-sparsematrixstats r-bioc-summarizedexperiment 798s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass 798s r-cran-base64enc r-cran-beeswarm r-cran-bh r-cran-biocmanager r-cran-bit 798s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio 798s r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-cli 798s r-cran-cluster r-cran-codetools r-cran-colorspace r-cran-commonmark 798s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-desc 798s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-dqrng r-cran-dynamictreecut 798s r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock 798s r-cran-fnn r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 798s r-cran-futile.options r-cran-generics r-cran-ggbeeswarm r-cran-ggplot2 798s r-cran-ggrastr r-cran-ggrepel r-cran-glue r-cran-gridextra r-cran-gtable 798s r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-httr2 798s r-cran-igraph r-cran-irlba r-cran-isoband r-cran-jquerylib r-cran-jsonlite 798s r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice 798s r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-locfit 798s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise 798s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-openssl 798s r-cran-pheatmap r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 798s r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise 798s r-cran-processx r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-ragg 798s r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy 798s r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcppml r-cran-rcppprogress 798s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 798s r-cran-rprojroot r-cran-rspectra r-cran-rsqlite r-cran-rsvd r-cran-rtsne 798s r-cran-sass r-cran-scales r-cran-shiny r-cran-sitmo r-cran-snow 798s r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-stringr r-cran-sys 798s r-cran-systemfonts r-cran-testthat r-cran-textshaping r-cran-tibble 798s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-uwot 798s r-cran-vctrs r-cran-vipor r-cran-viridis r-cran-viridislite r-cran-waldo 798s r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml t1utils 798s tex-common texlive-base texlive-bibtex-extra texlive-binaries 798s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 798s 0 upgraded, 402 newly installed, 0 to remove and 0 not upgraded. 798s Need to get 506 MB of archives. 798s After this operation, 1530 MB of additional disk space will be used. 798s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 799s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 799s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB] 806s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B] 806s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 806s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 806s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB] 807s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 807s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB] 807s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB] 809s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB] 809s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB] 811s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB] 812s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB] 813s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB] 815s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB] 830s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB] 831s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 831s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 831s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB] 833s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB] 844s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB] 844s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 844s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 844s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 844s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 844s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 845s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 846s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 846s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 846s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 846s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 847s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 847s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 851s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 854s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 854s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB] 855s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB] 866s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB] 866s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 866s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 866s Get:42 http://ftpmaster.internal/ubuntu plucky/universe arm64 hdf5-helpers arm64 1.14.5+repack-3 [17.0 kB] 866s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 866s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 12 [5216 B] 867s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 comerr-dev arm64 2.1-1.47.2-1ubuntu1 [45.1 kB] 867s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libgssrpc4t64 arm64 1.21.3-4ubuntu2 [58.5 kB] 867s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libkadm5clnt-mit12 arm64 1.21.3-4ubuntu2 [40.3 kB] 867s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libkdb5-10t64 arm64 1.21.3-4ubuntu2 [40.9 kB] 867s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libkadm5srv-mit12 arm64 1.21.3-4ubuntu2 [53.8 kB] 867s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 krb5-multidev arm64 1.21.3-4ubuntu2 [125 kB] 867s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 867s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libsuitesparseconfig7 arm64 1:7.8.3+dfsg-3 [13.2 kB] 868s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd3 arm64 1:7.8.3+dfsg-3 [26.1 kB] 868s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 868s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] 868s Get:56 http://ftpmaster.internal/ubuntu plucky/universe arm64 libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 868s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 868s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 868s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 869s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 libblosc1 arm64 1.21.5+ds-1build1 [25.7 kB] 869s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost1.83-dev arm64 1.83.0-4.1ubuntu2 [10.7 MB] 879s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost-dev arm64 1.83.0.2ubuntu1 [4468 B] 880s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libbrotli-dev arm64 1.1.0-2build4 [359 kB] 880s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 880s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 880s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 880s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 881s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 881s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 881s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolamd3 arm64 1:7.8.3+dfsg-3 [18.3 kB] 881s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libidn2-dev arm64 2.3.7-2build2 [120 kB] 882s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libkrb5-dev arm64 1.21.3-4ubuntu2 [11.9 kB] 882s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libldap-dev arm64 2.6.9+dfsg-1~exp2ubuntu1 [318 kB] 882s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 882s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 882s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 882s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libnghttp2-dev arm64 1.64.0-1 [120 kB] 883s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libpsl-dev arm64 0.21.2-1.1build1 [77.2 kB] 883s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-3ubuntu1 [10.1 kB] 883s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-3ubuntu1 [335 kB] 883s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10 [140 kB] 884s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libunbound8 arm64 1.22.0-1ubuntu1 [437 kB] 884s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libgnutls-dane0t64 arm64 3.8.9-2ubuntu2 [24.4 kB] 884s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libgnutls-openssl27t64 arm64 3.8.9-2ubuntu2 [24.4 kB] 884s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libp11-kit-dev arm64 0.25.5-2ubuntu3 [23.5 kB] 884s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libtasn1-6-dev arm64 4.20.0-2 [91.1 kB] 885s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 nettle-dev arm64 3.10.1-1 [1190 kB] 886s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libgnutls28-dev arm64 3.8.9-2ubuntu2 [1143 kB] 887s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 888s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2build7 [69.4 kB] 888s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libssl-dev arm64 3.4.1-1ubuntu1 [3287 kB] 891s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libssh2-1-dev arm64 1.11.1-1 [286 kB] 891s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libzstd-dev arm64 1.5.6+dfsg-2 [353 kB] 892s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 libcurl4-openssl-dev arm64 8.12.1-3ubuntu1 [506 kB] 892s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 892s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 893s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 893s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 libltdl7 arm64 2.5.4-4 [43.0 kB] 893s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libglpk40 arm64 5.0-1build2 [337 kB] 893s Get:100 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 893s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 894s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 894s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-310 arm64 1.14.5+repack-3 [1331 kB] 896s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-cpp-310 arm64 1.14.5+repack-3 [117 kB] 896s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-fortran-310 arm64 1.14.5+repack-3 [109 kB] 896s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [59.8 kB] 896s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-fortran-310 arm64 1.14.5+repack-3 [31.8 kB] 896s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-cpp-310 arm64 1.14.5+repack-3 [11.6 kB] 896s Get:109 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 897s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 898s Get:111 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 898s Get:112 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 898s Get:113 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 898s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec-dev arm64 1.1.3-1 [19.3 kB] 898s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-dev arm64 1.14.5+repack-3 [3581 kB] 901s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhnswlib-dev all 0.8.0-1build3 [24.4 kB] 901s Get:117 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 901s Get:118 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 901s Get:119 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 912s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 912s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 912s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 913s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 913s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 913s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 914s Get:126 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 914s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 914s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 914s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 914s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 915s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 915s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 915s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 915s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 915s Get:135 http://ftpmaster.internal/ubuntu plucky/main arm64 libkpathsea6 arm64 2024.20240313.70630+ds-5build2 [64.3 kB] 915s Get:136 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 918s Get:137 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 922s Get:138 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 922s Get:139 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 923s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmpfi0 arm64 1.5.4+ds-4 [35.3 kB] 923s Get:141 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 923s Get:142 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 924s Get:143 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 924s Get:144 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB] 924s Get:145 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB] 924s Get:146 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB] 924s Get:147 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 924s Get:148 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 924s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpcg-cpp-dev all 0.98.1-2 [21.4 kB] 925s Get:150 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 925s Get:151 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 925s Get:152 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 925s Get:153 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 926s Get:154 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB] 927s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpotrace0 arm64 1.16-2build1 [16.0 kB] 927s Get:156 http://ftpmaster.internal/ubuntu plucky/main arm64 libptexenc1 arm64 2024.20240313.70630+ds-5build2 [41.7 kB] 927s Get:157 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 927s Get:158 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 927s Get:159 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 927s Get:160 http://ftpmaster.internal/ubuntu plucky/main arm64 libsynctex2 arm64 2024.20240313.70630+ds-5build2 [60.3 kB] 927s Get:161 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 928s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 929s Get:163 http://ftpmaster.internal/ubuntu plucky/main arm64 libtexlua53-5 arm64 2024.20240313.70630+ds-5build2 [122 kB] 929s Get:164 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 929s Get:165 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 930s Get:166 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 930s Get:167 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 930s Get:168 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 930s Get:169 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 931s Get:170 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 931s Get:171 http://ftpmaster.internal/ubuntu plucky/main arm64 libxmu6 arm64 2:1.1.3-3build2 [47.5 kB] 931s Get:172 http://ftpmaster.internal/ubuntu plucky/main arm64 libxpm4 arm64 1:3.5.17-1build2 [35.1 kB] 931s Get:173 http://ftpmaster.internal/ubuntu plucky/main arm64 libxaw7 arm64 2:1.0.16-1 [184 kB] 932s Get:174 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 932s Get:175 http://ftpmaster.internal/ubuntu plucky/universe arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.1 [30.8 kB] 932s Get:176 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 932s Get:177 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 932s Get:178 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 932s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 964s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 964s Get:181 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 964s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 964s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 964s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 964s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 965s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 989s Get:187 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB] 989s Get:188 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 989s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B] 989s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 989s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 990s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-alabaster.schemas all 1.6.0+ds-2 [24.9 kB] 990s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 992s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhdf5lib arm64 1.28.0+dfsg-2build1 [97.4 kB] 992s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhdf5filters arm64 1.18.0+dfsg-2 [135 kB] 992s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhdf5 arm64 2.50.2+dfsg-1build1 [819 kB] 993s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 993s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 993s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 995s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-alabaster.base arm64 1.6.1+ds-2build1 [752 kB] 995s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 996s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB] 999s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB] 1000s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 1000s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-iranges arm64 2.40.1-2 [2303 kB] 1002s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 1002s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 1002s Get:208 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 1002s Get:209 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 1003s Get:210 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 1003s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-sparsearray arm64 1.6.2+dfsg-1 [1369 kB] 1004s Get:212 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 1006s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-hdf5array arm64 1.34.0-2build1 [8783 kB] 1011s Get:214 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-alabaster.matrix arm64 1.6.1+ds-2 [442 kB] 1012s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-curl arm64 6.2.1+dfsg-1ubuntu1 [196 kB] 1012s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 1012s Get:217 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 1012s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 1012s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 1013s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 1013s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 1013s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 1013s Get:223 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 1023s Get:224 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 1026s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 1027s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-alabaster.ranges all 1.6.0+ds-2 [100 kB] 1028s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 1029s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 1030s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB] 1031s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-alabaster.se all 1.6.0+ds-2 [87.0 kB] 1031s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-alabaster.sce all 1.6.0+ds-2 [83.6 kB] 1031s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB] 1032s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bit arm64 4.6.0+dfsg-1 [450 kB] 1032s Get:234 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bit64 arm64 4.6.0-1-1ubuntu2 [497 kB] 1033s Get:235 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB] 1034s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 1035s Get:237 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 1035s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 1036s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 1037s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 1037s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 1037s Get:242 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 1037s Get:243 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 1037s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 1037s Get:245 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 1038s Get:246 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cpp11 all 0.5.2-1 [233 kB] 1038s Get:247 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rsqlite arm64 2.3.9-1 [1247 kB] 1039s Get:248 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB] 1039s Get:249 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 1049s Get:250 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-keggrest all 1.46.0+dfsg-2 [183 kB] 1049s Get:251 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 1053s Get:252 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 1053s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-annotationfilter all 1.30.0+dfsg-2 [247 kB] 1054s Get:254 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 1054s Get:255 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 1054s Get:256 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 1054s Get:257 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 1055s Get:258 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 1055s Get:259 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 1056s Get:260 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 1056s Get:261 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 1056s Get:262 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 1058s Get:263 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 1058s Get:264 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringi arm64 1.8.4-1build1 [902 kB] 1059s Get:265 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 1060s Get:266 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 1061s Get:267 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dbplyr all 2.5.0+dfsg-1 [1233 kB] 1062s Get:268 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 1063s Get:269 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 1063s Get:270 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 1063s Get:271 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 1063s Get:272 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 1063s Get:273 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 1064s Get:274 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-annotationhub all 3.14.0+dfsg-2 [447 kB] 1064s Get:275 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-assorthead all 1.0.1+ds-2 [194 kB] 1064s Get:276 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-beachmat arm64 2.22.0+ds-2 [940 kB] 1065s Get:277 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 1066s Get:278 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocneighbors arm64 2.0.1+ds-2 [397 kB] 1066s Get:279 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 1066s Get:280 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 1067s Get:281 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 1067s Get:282 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 1067s Get:283 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 1067s Get:284 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 1067s Get:285 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 1067s Get:286 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 1069s Get:287 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-scaledmatrix all 1.14.0+dfsg-2 [324 kB] 1069s Get:288 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-irlba arm64 2.3.5.1-4 [295 kB] 1070s Get:289 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rsvd all 1.0.5-1 [3589 kB] 1073s Get:290 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocsingular arm64 1.22.0+ds-2 [354 kB] 1074s Get:291 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 1074s Get:292 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 1074s Get:293 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 1075s Get:294 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 1075s Get:295 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.51+dfsg-1 [573 kB] 1076s Get:296 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 1076s Get:297 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 1081s Get:298 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 1082s Get:299 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 1082s Get:300 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 1082s Get:301 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 1083s Get:302 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 1087s Get:303 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 1089s Get:304 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.56-1 [148 kB] 1089s Get:305 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 1089s Get:306 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 1089s Get:307 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 1090s Get:308 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 1090s Get:309 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 1091s Get:310 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 1091s Get:311 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB] 1091s Get:312 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 1091s Get:313 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 1095s Get:314 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 1097s Get:315 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 1098s Get:316 http://ftpmaster.internal/ubuntu plucky/universe arm64 tex-common all 6.19 [29.8 kB] 1098s Get:317 http://ftpmaster.internal/ubuntu plucky/main arm64 t1utils arm64 1.41-4build3 [61.0 kB] 1098s Get:318 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-binaries arm64 2024.20240313.70630+ds-5build2 [8328 kB] 1108s Get:319 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-base all 2024.20250114-1 [22.5 MB] 1132s Get:320 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-latex-base all 2024.20250114-1 [1264 kB] 1134s Get:321 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-bibtex-extra all 2024.20250114-1 [79.5 MB] 1228s Get:322 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 1228s Get:323 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cluster arm64 2.1.8-1 [568 kB] 1229s Get:324 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-igraph arm64 2.1.4-1 [5150 kB] 1235s Get:325 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-bluster arm64 1.16.0+dfsg-2 [542 kB] 1236s Get:326 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-sparsematrixstats arm64 1.18.0+dfsg-2 [853 kB] 1237s Get:327 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-delayedmatrixstats all 1.28.1+ds-1 [502 kB] 1237s Get:328 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-locfit arm64 1.5-9.12-1 [514 kB] 1238s Get:329 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 1238s Get:330 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 1240s Get:331 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-64-1 [1110 kB] 1241s Get:332 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.167-1 [2311 kB] 1244s Get:333 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 1248s Get:334 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 1249s Get:335 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 1249s Get:336 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 1251s Get:337 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 1252s Get:338 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 1252s Get:339 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 1253s Get:340 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 1254s Get:341 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 1259s Get:342 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpparmadillo arm64 14.2.3-1-1 [843 kB] 1260s Get:343 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-deseq2 arm64 1.46.0+dfsg-2 [1237 kB] 1261s Get:344 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB] 1262s Get:345 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-limma arm64 3.62.2+dfsg-1 [1968 kB] 1264s Get:346 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-edger arm64 4.4.2+dfsg-1 [1114 kB] 1266s Get:347 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xml arm64 3.99-0.18-1 [1745 kB] 1268s Get:348 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bitops arm64 1.0-9-1 [30.2 kB] 1268s Get:349 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhtslib arm64 3.2.0+dfsg-2 [1429 kB] 1270s Get:350 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rsamtools arm64 2.22.0+dfsg-2 [3668 kB] 1274s Get:351 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomicalignments arm64 1.42.0-2 [2164 kB] 1277s Get:352 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcurl arm64 1.98-1.16+dfsg-1 [806 kB] 1278s Get:353 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rjson arm64 0.2.23-1 [104 kB] 1278s Get:354 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 1278s Get:355 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rtracklayer arm64 1.66.0-2 [5218 kB] 1284s Get:356 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 1285s Get:357 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-protgenerics all 1.38.0-2 [239 kB] 1286s Get:358 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-ensembldb all 2.30.0+dfsg-3 [1520 kB] 1287s Get:359 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-experimenthub all 2.14.0+ds-2 [84.6 kB] 1288s Get:360 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr2 all 1.1.1-1 [752 kB] 1288s Get:361 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-gypsum all 1.2.0+ds-2 [212 kB] 1289s Get:362 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-metapod arm64 1.14.0+dfsg-2 [218 kB] 1289s Get:363 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-residualmatrix all 1.16.0+dfsg-2 [317 kB] 1290s Get:364 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-scuttle arm64 1.16.0+dfsg-3 [443 kB] 1290s Get:365 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-beeswarm arm64 0.4.0-1 [82.0 kB] 1290s Get:366 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vipor all 0.4.7-1 [4624 kB] 1296s Get:367 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggbeeswarm all 0.7.2-1 [1732 kB] 1298s Get:368 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 1299s Get:369 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 1301s Get:370 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rtsne arm64 0.17-1 [105 kB] 1302s Get:371 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 1303s Get:372 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppml arm64 0.3.7-2 [173 kB] 1304s Get:373 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fnn arm64 1.1.4.1-1 [125 kB] 1304s Get:374 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppannoy arm64 0.0.22-1 [231 kB] 1304s Get:375 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rspectra arm64 0.16-2-1 [429 kB] 1305s Get:376 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sitmo arm64 2.0.2-1 [129 kB] 1305s Get:377 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dqrng arm64 0.3.2+dfsg-1 [157 kB] 1305s Get:378 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 1306s Get:379 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-uwot arm64 0.2.3-1 [941 kB] 1307s Get:380 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 1307s Get:381 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggrepel arm64 0.9.6-1 [264 kB] 1307s Get:382 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cairo arm64 1.6-2-1 [89.0 kB] 1307s Get:383 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-systemfonts arm64 1.2.1-1 [302 kB] 1308s Get:384 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-textshaping arm64 0.3.7-2 [91.8 kB] 1308s Get:385 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ragg arm64 1.3.3-1 [496 kB] 1309s Get:386 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggrastr all 1.0.2-1 [2566 kB] 1312s Get:387 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-scater all 1.34.1+ds-1 [472 kB] 1312s Get:388 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-scran arm64 1.34.0+dfsg-3 [1009 kB] 1314s Get:389 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-scrnaseq all 2.20.0+ds-2 [309 kB] 1314s Get:390 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 1314s Get:391 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 1315s Get:392 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 1315s Get:393 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 1316s Get:394 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 1316s Get:395 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 1318s Get:396 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dynamictreecut all 1.63-1-3build1 [91.4 kB] 1318s Get:397 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 1318s Get:398 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB] 1318s Get:399 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB] 1318s Get:400 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 1319s Get:401 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-2 [150 kB] 1319s Get:402 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 1321s Preconfiguring packages ... 1321s Fetched 506 MB in 8min 42s (969 kB/s) 1321s Selecting previously unselected package libisl23:arm64. 1322s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 1322s Preparing to unpack .../000-libisl23_0.27-1_arm64.deb ... 1322s Unpacking libisl23:arm64 (0.27-1) ... 1322s Selecting previously unselected package libmpc3:arm64. 1322s Preparing to unpack .../001-libmpc3_1.3.1-1build2_arm64.deb ... 1322s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 1322s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 1322s Preparing to unpack .../002-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 1322s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 1322s Selecting previously unselected package cpp-14. 1322s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_arm64.deb ... 1322s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 1322s Selecting previously unselected package cpp-aarch64-linux-gnu. 1322s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 1322s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 1322s Selecting previously unselected package cpp. 1322s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 1322s Unpacking cpp (4:14.2.0-1ubuntu1) ... 1322s Selecting previously unselected package libcc1-0:arm64. 1322s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_arm64.deb ... 1322s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ... 1322s Selecting previously unselected package libgomp1:arm64. 1322s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_arm64.deb ... 1322s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ... 1322s Selecting previously unselected package libitm1:arm64. 1322s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_arm64.deb ... 1322s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ... 1322s Selecting previously unselected package libasan8:arm64. 1322s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_arm64.deb ... 1322s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ... 1322s Selecting previously unselected package liblsan0:arm64. 1322s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_arm64.deb ... 1322s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ... 1322s Selecting previously unselected package libtsan2:arm64. 1322s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_arm64.deb ... 1322s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ... 1322s Selecting previously unselected package libubsan1:arm64. 1322s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_arm64.deb ... 1322s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ... 1322s Selecting previously unselected package libhwasan0:arm64. 1322s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_arm64.deb ... 1322s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ... 1322s Selecting previously unselected package libgcc-14-dev:arm64. 1322s Preparing to unpack .../014-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ... 1322s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 1323s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 1323s Preparing to unpack .../015-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 1323s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 1323s Selecting previously unselected package gcc-14. 1323s Preparing to unpack .../016-gcc-14_14.2.0-17ubuntu3_arm64.deb ... 1323s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 1323s Selecting previously unselected package gcc-aarch64-linux-gnu. 1323s Preparing to unpack .../017-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 1323s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 1323s Selecting previously unselected package gcc. 1323s Preparing to unpack .../018-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ... 1323s Unpacking gcc (4:14.2.0-1ubuntu1) ... 1323s Selecting previously unselected package libstdc++-14-dev:arm64. 1323s Preparing to unpack .../019-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ... 1323s Unpacking libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 1323s Selecting previously unselected package g++-14-aarch64-linux-gnu. 1323s Preparing to unpack .../020-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 1323s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 1323s Selecting previously unselected package g++-14. 1323s Preparing to unpack .../021-g++-14_14.2.0-17ubuntu3_arm64.deb ... 1323s Unpacking g++-14 (14.2.0-17ubuntu3) ... 1324s Selecting previously unselected package g++-aarch64-linux-gnu. 1324s Preparing to unpack .../022-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 1324s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 1324s Selecting previously unselected package g++. 1324s Preparing to unpack .../023-g++_4%3a14.2.0-1ubuntu1_arm64.deb ... 1324s Unpacking g++ (4:14.2.0-1ubuntu1) ... 1324s Selecting previously unselected package build-essential. 1324s Preparing to unpack .../024-build-essential_12.10ubuntu1_arm64.deb ... 1324s Unpacking build-essential (12.10ubuntu1) ... 1324s Selecting previously unselected package dctrl-tools. 1324s Preparing to unpack .../025-dctrl-tools_2.24-3build3_arm64.deb ... 1324s Unpacking dctrl-tools (2.24-3build3) ... 1324s Selecting previously unselected package fonts-dejavu-mono. 1324s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ... 1324s Unpacking fonts-dejavu-mono (2.37-8) ... 1324s Selecting previously unselected package fonts-dejavu-core. 1324s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ... 1324s Unpacking fonts-dejavu-core (2.37-8) ... 1324s Selecting previously unselected package fontconfig-config. 1324s Preparing to unpack .../028-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ... 1324s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 1324s Selecting previously unselected package libfontconfig1:arm64. 1324s Preparing to unpack .../029-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ... 1324s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 1324s Selecting previously unselected package fontconfig. 1324s Preparing to unpack .../030-fontconfig_2.15.0-2ubuntu1_arm64.deb ... 1324s Unpacking fontconfig (2.15.0-2ubuntu1) ... 1324s Selecting previously unselected package fonts-font-awesome. 1324s Preparing to unpack .../031-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 1324s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 1324s Selecting previously unselected package fonts-glyphicons-halflings. 1324s Preparing to unpack .../032-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 1324s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1324s Selecting previously unselected package fonts-lmodern. 1324s Preparing to unpack .../033-fonts-lmodern_2.005-1_all.deb ... 1324s Unpacking fonts-lmodern (2.005-1) ... 1324s Selecting previously unselected package fonts-mathjax. 1324s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 1324s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 1324s Selecting previously unselected package libgfortran5:arm64. 1324s Preparing to unpack .../035-libgfortran5_15-20250222-0ubuntu1_arm64.deb ... 1324s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ... 1324s Selecting previously unselected package libgfortran-14-dev:arm64. 1324s Preparing to unpack .../036-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ... 1324s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 1324s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 1325s Preparing to unpack .../037-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 1325s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 1325s Selecting previously unselected package gfortran-14. 1325s Preparing to unpack .../038-gfortran-14_14.2.0-17ubuntu3_arm64.deb ... 1325s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 1325s Selecting previously unselected package gfortran-aarch64-linux-gnu. 1325s Preparing to unpack .../039-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 1325s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 1325s Selecting previously unselected package gfortran. 1325s Preparing to unpack .../040-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ... 1325s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 1325s Selecting previously unselected package hdf5-helpers. 1325s Preparing to unpack .../041-hdf5-helpers_1.14.5+repack-3_arm64.deb ... 1325s Unpacking hdf5-helpers (1.14.5+repack-3) ... 1325s Selecting previously unselected package icu-devtools. 1325s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_arm64.deb ... 1325s Unpacking icu-devtools (76.1-1ubuntu2) ... 1325s Selecting previously unselected package javascript-common. 1325s Preparing to unpack .../043-javascript-common_12_all.deb ... 1325s Unpacking javascript-common (12) ... 1325s Selecting previously unselected package comerr-dev:arm64. 1325s Preparing to unpack .../044-comerr-dev_2.1-1.47.2-1ubuntu1_arm64.deb ... 1325s Unpacking comerr-dev:arm64 (2.1-1.47.2-1ubuntu1) ... 1325s Selecting previously unselected package libgssrpc4t64:arm64. 1325s Preparing to unpack .../045-libgssrpc4t64_1.21.3-4ubuntu2_arm64.deb ... 1325s Unpacking libgssrpc4t64:arm64 (1.21.3-4ubuntu2) ... 1325s Selecting previously unselected package libkadm5clnt-mit12:arm64. 1325s Preparing to unpack .../046-libkadm5clnt-mit12_1.21.3-4ubuntu2_arm64.deb ... 1325s Unpacking libkadm5clnt-mit12:arm64 (1.21.3-4ubuntu2) ... 1325s Selecting previously unselected package libkdb5-10t64:arm64. 1325s Preparing to unpack .../047-libkdb5-10t64_1.21.3-4ubuntu2_arm64.deb ... 1325s Unpacking libkdb5-10t64:arm64 (1.21.3-4ubuntu2) ... 1325s Selecting previously unselected package libkadm5srv-mit12:arm64. 1325s Preparing to unpack .../048-libkadm5srv-mit12_1.21.3-4ubuntu2_arm64.deb ... 1325s Unpacking libkadm5srv-mit12:arm64 (1.21.3-4ubuntu2) ... 1325s Selecting previously unselected package krb5-multidev:arm64. 1325s Preparing to unpack .../049-krb5-multidev_1.21.3-4ubuntu2_arm64.deb ... 1325s Unpacking krb5-multidev:arm64 (1.21.3-4ubuntu2) ... 1325s Selecting previously unselected package libaec0:arm64. 1325s Preparing to unpack .../050-libaec0_1.1.3-1_arm64.deb ... 1325s Unpacking libaec0:arm64 (1.1.3-1) ... 1325s Selecting previously unselected package libsuitesparseconfig7:arm64. 1325s Preparing to unpack .../051-libsuitesparseconfig7_1%3a7.8.3+dfsg-3_arm64.deb ... 1325s Unpacking libsuitesparseconfig7:arm64 (1:7.8.3+dfsg-3) ... 1325s Selecting previously unselected package libamd3:arm64. 1325s Preparing to unpack .../052-libamd3_1%3a7.8.3+dfsg-3_arm64.deb ... 1325s Unpacking libamd3:arm64 (1:7.8.3+dfsg-3) ... 1325s Selecting previously unselected package libio-string-perl. 1325s Preparing to unpack .../053-libio-string-perl_1.08-4_all.deb ... 1325s Unpacking libio-string-perl (1.08-4) ... 1325s Selecting previously unselected package liblatex-tounicode-perl. 1325s Preparing to unpack .../054-liblatex-tounicode-perl_0.55-1_all.deb ... 1325s Unpacking liblatex-tounicode-perl (0.55-1) ... 1325s Selecting previously unselected package libbibtex-parser-perl. 1325s Preparing to unpack .../055-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 1325s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 1325s Selecting previously unselected package libblas3:arm64. 1325s Preparing to unpack .../056-libblas3_3.12.1-2_arm64.deb ... 1325s Unpacking libblas3:arm64 (3.12.1-2) ... 1325s Selecting previously unselected package libblas-dev:arm64. 1325s Preparing to unpack .../057-libblas-dev_3.12.1-2_arm64.deb ... 1325s Unpacking libblas-dev:arm64 (3.12.1-2) ... 1325s Selecting previously unselected package libsnappy1v5:arm64. 1325s Preparing to unpack .../058-libsnappy1v5_1.2.1-1_arm64.deb ... 1325s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 1325s Selecting previously unselected package libblosc1:arm64. 1325s Preparing to unpack .../059-libblosc1_1.21.5+ds-1build1_arm64.deb ... 1325s Unpacking libblosc1:arm64 (1.21.5+ds-1build1) ... 1326s Selecting previously unselected package libboost1.83-dev:arm64. 1326s Preparing to unpack .../060-libboost1.83-dev_1.83.0-4.1ubuntu2_arm64.deb ... 1326s Unpacking libboost1.83-dev:arm64 (1.83.0-4.1ubuntu2) ... 1327s Selecting previously unselected package libboost-dev:arm64. 1327s Preparing to unpack .../061-libboost-dev_1.83.0.2ubuntu1_arm64.deb ... 1327s Unpacking libboost-dev:arm64 (1.83.0.2ubuntu1) ... 1327s Selecting previously unselected package libbrotli-dev:arm64. 1327s Preparing to unpack .../062-libbrotli-dev_1.1.0-2build4_arm64.deb ... 1327s Unpacking libbrotli-dev:arm64 (1.1.0-2build4) ... 1327s Selecting previously unselected package libbz2-dev:arm64. 1327s Preparing to unpack .../063-libbz2-dev_1.0.8-6_arm64.deb ... 1327s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 1327s Selecting previously unselected package libpixman-1-0:arm64. 1327s Preparing to unpack .../064-libpixman-1-0_0.44.0-3_arm64.deb ... 1327s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 1327s Selecting previously unselected package libxcb-render0:arm64. 1327s Preparing to unpack .../065-libxcb-render0_1.17.0-2_arm64.deb ... 1327s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 1327s Selecting previously unselected package libxcb-shm0:arm64. 1327s Preparing to unpack .../066-libxcb-shm0_1.17.0-2_arm64.deb ... 1327s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 1328s Selecting previously unselected package libxrender1:arm64. 1328s Preparing to unpack .../067-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 1328s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 1328s Selecting previously unselected package libcairo2:arm64. 1328s Preparing to unpack .../068-libcairo2_1.18.2-2_arm64.deb ... 1328s Unpacking libcairo2:arm64 (1.18.2-2) ... 1328s Selecting previously unselected package libcolamd3:arm64. 1328s Preparing to unpack .../069-libcolamd3_1%3a7.8.3+dfsg-3_arm64.deb ... 1328s Unpacking libcolamd3:arm64 (1:7.8.3+dfsg-3) ... 1328s Selecting previously unselected package libidn2-dev:arm64. 1328s Preparing to unpack .../070-libidn2-dev_2.3.7-2build2_arm64.deb ... 1328s Unpacking libidn2-dev:arm64 (2.3.7-2build2) ... 1328s Selecting previously unselected package libkrb5-dev:arm64. 1328s Preparing to unpack .../071-libkrb5-dev_1.21.3-4ubuntu2_arm64.deb ... 1328s Unpacking libkrb5-dev:arm64 (1.21.3-4ubuntu2) ... 1328s Selecting previously unselected package libldap-dev:arm64. 1328s Preparing to unpack .../072-libldap-dev_2.6.9+dfsg-1~exp2ubuntu1_arm64.deb ... 1328s Unpacking libldap-dev:arm64 (2.6.9+dfsg-1~exp2ubuntu1) ... 1328s Selecting previously unselected package libpkgconf3:arm64. 1328s Preparing to unpack .../073-libpkgconf3_1.8.1-4_arm64.deb ... 1328s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 1328s Selecting previously unselected package pkgconf-bin. 1328s Preparing to unpack .../074-pkgconf-bin_1.8.1-4_arm64.deb ... 1328s Unpacking pkgconf-bin (1.8.1-4) ... 1328s Selecting previously unselected package pkgconf:arm64. 1328s Preparing to unpack .../075-pkgconf_1.8.1-4_arm64.deb ... 1328s Unpacking pkgconf:arm64 (1.8.1-4) ... 1328s Selecting previously unselected package libnghttp2-dev:arm64. 1328s Preparing to unpack .../076-libnghttp2-dev_1.64.0-1_arm64.deb ... 1328s Unpacking libnghttp2-dev:arm64 (1.64.0-1) ... 1328s Selecting previously unselected package libpsl-dev:arm64. 1328s Preparing to unpack .../077-libpsl-dev_0.21.2-1.1build1_arm64.deb ... 1328s Unpacking libpsl-dev:arm64 (0.21.2-1.1build1) ... 1328s Selecting previously unselected package libgmpxx4ldbl:arm64. 1328s Preparing to unpack .../078-libgmpxx4ldbl_2%3a6.3.0+dfsg-3ubuntu1_arm64.deb ... 1328s Unpacking libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-3ubuntu1) ... 1328s Selecting previously unselected package libgmp-dev:arm64. 1328s Preparing to unpack .../079-libgmp-dev_2%3a6.3.0+dfsg-3ubuntu1_arm64.deb ... 1328s Unpacking libgmp-dev:arm64 (2:6.3.0+dfsg-3ubuntu1) ... 1328s Selecting previously unselected package libevent-2.1-7t64:arm64. 1328s Preparing to unpack .../080-libevent-2.1-7t64_2.1.12-stable-10_arm64.deb ... 1328s Unpacking libevent-2.1-7t64:arm64 (2.1.12-stable-10) ... 1328s Selecting previously unselected package libunbound8:arm64. 1328s Preparing to unpack .../081-libunbound8_1.22.0-1ubuntu1_arm64.deb ... 1328s Unpacking libunbound8:arm64 (1.22.0-1ubuntu1) ... 1328s Selecting previously unselected package libgnutls-dane0t64:arm64. 1328s Preparing to unpack .../082-libgnutls-dane0t64_3.8.9-2ubuntu2_arm64.deb ... 1328s Unpacking libgnutls-dane0t64:arm64 (3.8.9-2ubuntu2) ... 1328s Selecting previously unselected package libgnutls-openssl27t64:arm64. 1328s Preparing to unpack .../083-libgnutls-openssl27t64_3.8.9-2ubuntu2_arm64.deb ... 1328s Unpacking libgnutls-openssl27t64:arm64 (3.8.9-2ubuntu2) ... 1328s Selecting previously unselected package libp11-kit-dev:arm64. 1328s Preparing to unpack .../084-libp11-kit-dev_0.25.5-2ubuntu3_arm64.deb ... 1328s Unpacking libp11-kit-dev:arm64 (0.25.5-2ubuntu3) ... 1328s Selecting previously unselected package libtasn1-6-dev:arm64. 1328s Preparing to unpack .../085-libtasn1-6-dev_4.20.0-2_arm64.deb ... 1328s Unpacking libtasn1-6-dev:arm64 (4.20.0-2) ... 1328s Selecting previously unselected package nettle-dev:arm64. 1328s Preparing to unpack .../086-nettle-dev_3.10.1-1_arm64.deb ... 1328s Unpacking nettle-dev:arm64 (3.10.1-1) ... 1328s Selecting previously unselected package libgnutls28-dev:arm64. 1328s Preparing to unpack .../087-libgnutls28-dev_3.8.9-2ubuntu2_arm64.deb ... 1328s Unpacking libgnutls28-dev:arm64 (3.8.9-2ubuntu2) ... 1328s Selecting previously unselected package zlib1g-dev:arm64. 1328s Preparing to unpack .../088-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 1328s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1328s Selecting previously unselected package librtmp-dev:arm64. 1329s Preparing to unpack .../089-librtmp-dev_2.4+20151223.gitfa8646d.1-2build7_arm64.deb ... 1329s Unpacking librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2build7) ... 1329s Selecting previously unselected package libssl-dev:arm64. 1329s Preparing to unpack .../090-libssl-dev_3.4.1-1ubuntu1_arm64.deb ... 1329s Unpacking libssl-dev:arm64 (3.4.1-1ubuntu1) ... 1329s Selecting previously unselected package libssh2-1-dev:arm64. 1329s Preparing to unpack .../091-libssh2-1-dev_1.11.1-1_arm64.deb ... 1329s Unpacking libssh2-1-dev:arm64 (1.11.1-1) ... 1329s Selecting previously unselected package libzstd-dev:arm64. 1329s Preparing to unpack .../092-libzstd-dev_1.5.6+dfsg-2_arm64.deb ... 1329s Unpacking libzstd-dev:arm64 (1.5.6+dfsg-2) ... 1329s Selecting previously unselected package libcurl4-openssl-dev:arm64. 1329s Preparing to unpack .../093-libcurl4-openssl-dev_8.12.1-3ubuntu1_arm64.deb ... 1329s Unpacking libcurl4-openssl-dev:arm64 (8.12.1-3ubuntu1) ... 1329s Selecting previously unselected package libdatrie1:arm64. 1329s Preparing to unpack .../094-libdatrie1_0.2.13-3build1_arm64.deb ... 1329s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 1329s Selecting previously unselected package libdeflate0:arm64. 1329s Preparing to unpack .../095-libdeflate0_1.23-1_arm64.deb ... 1329s Unpacking libdeflate0:arm64 (1.23-1) ... 1329s Selecting previously unselected package libdeflate-dev:arm64. 1329s Preparing to unpack .../096-libdeflate-dev_1.23-1_arm64.deb ... 1329s Unpacking libdeflate-dev:arm64 (1.23-1) ... 1329s Selecting previously unselected package libltdl7:arm64. 1329s Preparing to unpack .../097-libltdl7_2.5.4-4_arm64.deb ... 1329s Unpacking libltdl7:arm64 (2.5.4-4) ... 1329s Selecting previously unselected package libglpk40:arm64. 1329s Preparing to unpack .../098-libglpk40_5.0-1build2_arm64.deb ... 1329s Unpacking libglpk40:arm64 (5.0-1build2) ... 1329s Selecting previously unselected package libgraphite2-3:arm64. 1329s Preparing to unpack .../099-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 1329s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 1329s Selecting previously unselected package libharfbuzz0b:arm64. 1329s Preparing to unpack .../100-libharfbuzz0b_10.2.0-1_arm64.deb ... 1329s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 1329s Selecting previously unselected package libsz2:arm64. 1329s Preparing to unpack .../101-libsz2_1.1.3-1_arm64.deb ... 1329s Unpacking libsz2:arm64 (1.1.3-1) ... 1329s Selecting previously unselected package libhdf5-310:arm64. 1329s Preparing to unpack .../102-libhdf5-310_1.14.5+repack-3_arm64.deb ... 1329s Unpacking libhdf5-310:arm64 (1.14.5+repack-3) ... 1329s Selecting previously unselected package libhdf5-cpp-310:arm64. 1329s Preparing to unpack .../103-libhdf5-cpp-310_1.14.5+repack-3_arm64.deb ... 1329s Unpacking libhdf5-cpp-310:arm64 (1.14.5+repack-3) ... 1329s Selecting previously unselected package libhdf5-fortran-310:arm64. 1329s Preparing to unpack .../104-libhdf5-fortran-310_1.14.5+repack-3_arm64.deb ... 1329s Unpacking libhdf5-fortran-310:arm64 (1.14.5+repack-3) ... 1329s Selecting previously unselected package libhdf5-hl-310:arm64. 1329s Preparing to unpack .../105-libhdf5-hl-310_1.14.5+repack-3_arm64.deb ... 1329s Unpacking libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 1329s Selecting previously unselected package libhdf5-hl-fortran-310:arm64. 1329s Preparing to unpack .../106-libhdf5-hl-fortran-310_1.14.5+repack-3_arm64.deb ... 1329s Unpacking libhdf5-hl-fortran-310:arm64 (1.14.5+repack-3) ... 1329s Selecting previously unselected package libhdf5-hl-cpp-310:arm64. 1329s Preparing to unpack .../107-libhdf5-hl-cpp-310_1.14.5+repack-3_arm64.deb ... 1329s Unpacking libhdf5-hl-cpp-310:arm64 (1.14.5+repack-3) ... 1329s Selecting previously unselected package libjpeg-turbo8:arm64. 1329s Preparing to unpack .../108-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 1329s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 1329s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 1329s Preparing to unpack .../109-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 1329s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 1329s Selecting previously unselected package libjpeg8:arm64. 1330s Preparing to unpack .../110-libjpeg8_8c-2ubuntu11_arm64.deb ... 1330s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 1330s Selecting previously unselected package libjpeg8-dev:arm64. 1330s Preparing to unpack .../111-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 1330s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 1330s Selecting previously unselected package libjpeg-dev:arm64. 1330s Preparing to unpack .../112-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 1330s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 1330s Selecting previously unselected package libaec-dev:arm64. 1330s Preparing to unpack .../113-libaec-dev_1.1.3-1_arm64.deb ... 1330s Unpacking libaec-dev:arm64 (1.1.3-1) ... 1330s Selecting previously unselected package libhdf5-dev. 1330s Preparing to unpack .../114-libhdf5-dev_1.14.5+repack-3_arm64.deb ... 1330s Unpacking libhdf5-dev (1.14.5+repack-3) ... 1330s Selecting previously unselected package libhnswlib-dev. 1330s Preparing to unpack .../115-libhnswlib-dev_0.8.0-1build3_all.deb ... 1330s Unpacking libhnswlib-dev (0.8.0-1build3) ... 1330s Selecting previously unselected package x11-common. 1330s Preparing to unpack .../116-x11-common_1%3a7.7+23ubuntu3_all.deb ... 1330s Unpacking x11-common (1:7.7+23ubuntu3) ... 1330s Selecting previously unselected package libice6:arm64. 1330s Preparing to unpack .../117-libice6_2%3a1.1.1-1_arm64.deb ... 1330s Unpacking libice6:arm64 (2:1.1.1-1) ... 1330s Selecting previously unselected package libicu-dev:arm64. 1330s Preparing to unpack .../118-libicu-dev_76.1-1ubuntu2_arm64.deb ... 1330s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 1330s Selecting previously unselected package libjs-bootstrap. 1330s Preparing to unpack .../119-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 1330s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 1330s Selecting previously unselected package libjs-popper.js. 1330s Preparing to unpack .../120-libjs-popper.js_1.16.1+ds-6_all.deb ... 1330s Unpacking libjs-popper.js (1.16.1+ds-6) ... 1330s Selecting previously unselected package libjs-bootstrap4. 1330s Preparing to unpack .../121-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 1330s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 1330s Selecting previously unselected package libjs-d3. 1330s Preparing to unpack .../122-libjs-d3_3.5.17-4_all.deb ... 1330s Unpacking libjs-d3 (3.5.17-4) ... 1330s Selecting previously unselected package libjs-es5-shim. 1330s Preparing to unpack .../123-libjs-es5-shim_4.6.7-2_all.deb ... 1330s Unpacking libjs-es5-shim (4.6.7-2) ... 1330s Selecting previously unselected package libjs-highlight.js. 1330s Preparing to unpack .../124-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 1330s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 1331s Selecting previously unselected package libjs-jquery. 1331s Preparing to unpack .../125-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 1331s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1331s Selecting previously unselected package libjs-jquery-datatables. 1331s Preparing to unpack .../126-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 1331s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 1331s Selecting previously unselected package libjs-sifter.js. 1331s Preparing to unpack .../127-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 1331s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 1331s Selecting previously unselected package libjs-microplugin.js. 1331s Preparing to unpack .../128-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 1331s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 1331s Selecting previously unselected package libjs-jquery-selectize.js. 1331s Preparing to unpack .../129-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 1331s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1331s Selecting previously unselected package libjs-jquery-ui. 1331s Preparing to unpack .../130-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 1331s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 1331s Selecting previously unselected package libjs-json. 1331s Preparing to unpack .../131-libjs-json_0~20221030+~1.0.8-1_all.deb ... 1331s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 1331s Selecting previously unselected package libjs-lunr. 1331s Preparing to unpack .../132-libjs-lunr_2.3.9~dfsg-2_all.deb ... 1331s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 1331s Selecting previously unselected package libjs-prettify. 1331s Preparing to unpack .../133-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 1331s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 1331s Selecting previously unselected package libkpathsea6:arm64. 1331s Preparing to unpack .../134-libkpathsea6_2024.20240313.70630+ds-5build2_arm64.deb ... 1331s Unpacking libkpathsea6:arm64 (2024.20240313.70630+ds-5build2) ... 1331s Selecting previously unselected package liblapack3:arm64. 1331s Preparing to unpack .../135-liblapack3_3.12.1-2_arm64.deb ... 1331s Unpacking liblapack3:arm64 (3.12.1-2) ... 1331s Selecting previously unselected package liblapack-dev:arm64. 1331s Preparing to unpack .../136-liblapack-dev_3.12.1-2_arm64.deb ... 1331s Unpacking liblapack-dev:arm64 (3.12.1-2) ... 1331s Selecting previously unselected package liblerc4:arm64. 1331s Preparing to unpack .../137-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 1331s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 1331s Selecting previously unselected package liblua5.4-0:arm64. 1331s Preparing to unpack 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libpango-1.0-0:arm64 (1.56.2-1) ... 1332s Selecting previously unselected package libpangoft2-1.0-0:arm64. 1332s Preparing to unpack .../144-libpangoft2-1.0-0_1.56.2-1_arm64.deb ... 1332s Unpacking libpangoft2-1.0-0:arm64 (1.56.2-1) ... 1332s Selecting previously unselected package libpangocairo-1.0-0:arm64. 1332s Preparing to unpack .../145-libpangocairo-1.0-0_1.56.2-1_arm64.deb ... 1332s Unpacking libpangocairo-1.0-0:arm64 (1.56.2-1) ... 1332s Selecting previously unselected package libpaper2:arm64. 1332s Preparing to unpack .../146-libpaper2_2.2.5-0.3_arm64.deb ... 1332s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 1332s Selecting previously unselected package libpaper-utils. 1332s Preparing to unpack .../147-libpaper-utils_2.2.5-0.3_arm64.deb ... 1332s Unpacking libpaper-utils (2.2.5-0.3) ... 1332s Selecting previously unselected package libpcg-cpp-dev. 1332s Preparing to unpack .../148-libpcg-cpp-dev_0.98.1-2_all.deb ... 1332s Unpacking libpcg-cpp-dev (0.98.1-2) ... 1332s Selecting previously unselected package libpcre2-16-0:arm64. 1332s Preparing to unpack .../149-libpcre2-16-0_10.45-1_arm64.deb ... 1332s Unpacking libpcre2-16-0:arm64 (10.45-1) ... 1332s Selecting previously unselected package libpcre2-32-0:arm64. 1332s Preparing to unpack .../150-libpcre2-32-0_10.45-1_arm64.deb ... 1332s Unpacking libpcre2-32-0:arm64 (10.45-1) ... 1332s Selecting previously unselected package libpcre2-posix3:arm64. 1332s Preparing to unpack .../151-libpcre2-posix3_10.45-1_arm64.deb ... 1332s Unpacking libpcre2-posix3:arm64 (10.45-1) ... 1332s Selecting previously unselected package libpcre2-dev:arm64. 1332s Preparing to unpack .../152-libpcre2-dev_10.45-1_arm64.deb ... 1332s Unpacking libpcre2-dev:arm64 (10.45-1) ... 1332s Selecting previously unselected package libpng-dev:arm64. 1332s Preparing to unpack .../153-libpng-dev_1.6.47-1_arm64.deb ... 1332s Unpacking libpng-dev:arm64 (1.6.47-1) ... 1332s Selecting previously unselected package libpotrace0:arm64. 1332s Preparing to unpack .../154-libpotrace0_1.16-2build1_arm64.deb ... 1332s Unpacking libpotrace0:arm64 (1.16-2build1) ... 1332s Selecting previously unselected package libptexenc1:arm64. 1332s Preparing to unpack .../155-libptexenc1_2024.20240313.70630+ds-5build2_arm64.deb ... 1332s Unpacking libptexenc1:arm64 (2024.20240313.70630+ds-5build2) ... 1332s Selecting previously unselected package libreadline-dev:arm64. 1332s Preparing to unpack .../156-libreadline-dev_8.2-6_arm64.deb ... 1332s Unpacking libreadline-dev:arm64 (8.2-6) ... 1332s Selecting previously unselected package libsharpyuv0:arm64. 1332s Preparing to unpack .../157-libsharpyuv0_1.5.0-0.1_arm64.deb ... 1332s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 1332s Selecting previously unselected package libsm6:arm64. 1332s Preparing to unpack .../158-libsm6_2%3a1.2.4-1_arm64.deb ... 1332s Unpacking libsm6:arm64 (2:1.2.4-1) ... 1332s Selecting previously unselected package libsynctex2:arm64. 1332s Preparing to unpack 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Preparing to unpack .../164-libwebp7_1.5.0-0.1_arm64.deb ... 1332s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 1332s Selecting previously unselected package libtiff6:arm64. 1333s Preparing to unpack .../165-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 1333s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 1333s Selecting previously unselected package libxft2:arm64. 1333s Preparing to unpack .../166-libxft2_2.3.6-1build1_arm64.deb ... 1333s Unpacking libxft2:arm64 (2.3.6-1build1) ... 1333s Selecting previously unselected package libxss1:arm64. 1333s Preparing to unpack .../167-libxss1_1%3a1.2.3-1build3_arm64.deb ... 1333s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 1333s Selecting previously unselected package libtk8.6:arm64. 1333s Preparing to unpack .../168-libtk8.6_8.6.16-1_arm64.deb ... 1333s Unpacking libtk8.6:arm64 (8.6.16-1) ... 1333s Selecting previously unselected package libxt6t64:arm64. 1333s Preparing to unpack .../169-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 1333s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 1333s Selecting previously unselected package libxmu6:arm64. 1333s Preparing to unpack .../170-libxmu6_2%3a1.1.3-3build2_arm64.deb ... 1333s Unpacking libxmu6:arm64 (2:1.1.3-3build2) ... 1333s Selecting previously unselected package libxpm4:arm64. 1333s Preparing to unpack .../171-libxpm4_1%3a3.5.17-1build2_arm64.deb ... 1333s Unpacking libxpm4:arm64 (1:3.5.17-1build2) ... 1333s Selecting previously unselected package libxaw7:arm64. 1333s Preparing to unpack .../172-libxaw7_2%3a1.0.16-1_arm64.deb ... 1333s Unpacking libxaw7:arm64 (2:1.0.16-1) ... 1333s Selecting previously unselected package libxi6:arm64. 1333s Preparing to unpack .../173-libxi6_2%3a1.8.2-1_arm64.deb ... 1333s Unpacking libxi6:arm64 (2:1.8.2-1) ... 1333s Selecting previously unselected package libzzip-0-13t64:arm64. 1333s Preparing to unpack .../174-libzzip-0-13t64_0.13.78+dfsg.1-0.1_arm64.deb ... 1333s Unpacking libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.1) ... 1333s Selecting previously unselected package zip. 1333s Preparing to unpack .../175-zip_3.0-14ubuntu2_arm64.deb ... 1333s Unpacking zip (3.0-14ubuntu2) ... 1333s Selecting previously unselected package unzip. 1333s Preparing to unpack .../176-unzip_6.0-28ubuntu6_arm64.deb ... 1333s Unpacking unzip (6.0-28ubuntu6) ... 1333s Selecting previously unselected package xdg-utils. 1333s Preparing to unpack .../177-xdg-utils_1.2.1-2ubuntu1_all.deb ... 1333s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 1333s Selecting previously unselected package r-base-core. 1333s Preparing to unpack .../178-r-base-core_4.4.3-1_arm64.deb ... 1333s Unpacking r-base-core (4.4.3-1) ... 1334s Selecting previously unselected package r-cran-littler. 1334s Preparing to unpack .../179-r-cran-littler_0.3.20-2_arm64.deb ... 1334s Unpacking r-cran-littler (0.3.20-2) ... 1334s Selecting previously unselected package littler. 1334s Preparing to unpack .../180-littler_0.3.20-2_all.deb ... 1334s Unpacking littler (0.3.20-2) ... 1334s Selecting previously unselected package node-bootstrap-sass. 1334s Preparing to unpack .../181-node-bootstrap-sass_3.4.3-2_all.deb ... 1334s Unpacking node-bootstrap-sass (3.4.3-2) ... 1334s Selecting previously unselected package node-html5shiv. 1334s Preparing to unpack .../182-node-html5shiv_3.7.3+dfsg-5_all.deb ... 1334s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 1334s Selecting previously unselected package node-normalize.css. 1334s Preparing to unpack .../183-node-normalize.css_8.0.1-5_all.deb ... 1334s Unpacking node-normalize.css (8.0.1-5) ... 1334s Selecting previously unselected package pandoc-data. 1334s Preparing to unpack .../184-pandoc-data_3.1.11.1-3build1_all.deb ... 1334s Unpacking pandoc-data (3.1.11.1-3build1) ... 1334s Selecting previously unselected package pandoc. 1334s Preparing to unpack .../185-pandoc_3.1.11.1+ds-2_arm64.deb ... 1334s Unpacking pandoc (3.1.11.1+ds-2) ... 1335s Selecting previously unselected package liblzma-dev:arm64. 1335s Preparing to unpack .../186-liblzma-dev_5.6.4-1_arm64.deb ... 1335s Unpacking liblzma-dev:arm64 (5.6.4-1) ... 1335s Selecting previously unselected package libtirpc-dev:arm64. 1335s Preparing to unpack .../187-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 1335s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 1335s Selecting previously unselected package r-base-dev. 1335s Preparing to unpack .../188-r-base-dev_4.4.3-1_all.deb ... 1335s Unpacking r-base-dev (4.4.3-1) ... 1335s Selecting previously unselected package pkg-r-autopkgtest. 1335s Preparing to unpack .../189-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 1335s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 1335s Selecting previously unselected package r-bioc-biocgenerics. 1335s Preparing to unpack .../190-r-bioc-biocgenerics_0.52.0-2_all.deb ... 1335s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 1335s Selecting previously unselected package r-bioc-alabaster.schemas. 1335s Preparing to unpack .../191-r-bioc-alabaster.schemas_1.6.0+ds-2_all.deb ... 1335s Unpacking r-bioc-alabaster.schemas (1.6.0+ds-2) ... 1335s Selecting previously unselected package r-bioc-s4vectors. 1335s Preparing to unpack .../192-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 1335s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 1335s Selecting previously unselected package r-bioc-rhdf5lib. 1335s Preparing to unpack .../193-r-bioc-rhdf5lib_1.28.0+dfsg-2build1_arm64.deb ... 1335s Unpacking r-bioc-rhdf5lib (1.28.0+dfsg-2build1) ... 1335s Selecting previously unselected package r-bioc-rhdf5filters. 1335s Preparing to unpack .../194-r-bioc-rhdf5filters_1.18.0+dfsg-2_arm64.deb ... 1335s Unpacking r-bioc-rhdf5filters (1.18.0+dfsg-2) ... 1335s Selecting previously unselected package r-bioc-rhdf5. 1335s Preparing to unpack .../195-r-bioc-rhdf5_2.50.2+dfsg-1build1_arm64.deb ... 1335s Unpacking r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 1335s Selecting previously unselected package r-cran-jsonlite. 1335s Preparing to unpack .../196-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 1335s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 1335s Selecting previously unselected package r-cran-pkgkitten. 1335s Preparing to unpack .../197-r-cran-pkgkitten_0.2.4-1_all.deb ... 1335s Unpacking r-cran-pkgkitten (0.2.4-1) ... 1335s Selecting previously unselected package r-cran-rcpp. 1335s Preparing to unpack .../198-r-cran-rcpp_1.0.14-1_arm64.deb ... 1335s Unpacking r-cran-rcpp (1.0.14-1) ... 1335s Selecting previously unselected package r-bioc-alabaster.base. 1335s Preparing to unpack .../199-r-bioc-alabaster.base_1.6.1+ds-2build1_arm64.deb ... 1335s Unpacking r-bioc-alabaster.base (1.6.1+ds-2build1) ... 1335s Selecting previously unselected package r-cran-lattice. 1335s Preparing to unpack .../200-r-cran-lattice_0.22-6-1_arm64.deb ... 1335s Unpacking r-cran-lattice (0.22-6-1) ... 1335s Selecting previously unselected package r-cran-matrix. 1335s Preparing to unpack .../201-r-cran-matrix_1.7-3-1_arm64.deb ... 1335s Unpacking r-cran-matrix (1.7-3-1) ... 1335s Selecting previously unselected package r-cran-matrixstats. 1336s Preparing to unpack .../202-r-cran-matrixstats_1.5.0-1_arm64.deb ... 1336s Unpacking r-cran-matrixstats (1.5.0-1) ... 1336s Selecting previously unselected package r-bioc-matrixgenerics. 1336s Preparing to unpack .../203-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 1336s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 1336s Selecting previously unselected package r-bioc-iranges. 1336s Preparing to unpack .../204-r-bioc-iranges_2.40.1-2_arm64.deb ... 1336s Unpacking r-bioc-iranges (2.40.1-2) ... 1336s Selecting previously unselected package r-cran-abind. 1336s Preparing to unpack .../205-r-cran-abind_1.4-8-1_all.deb ... 1336s Unpacking r-cran-abind (1.4-8-1) ... 1336s Selecting previously unselected package r-cran-crayon. 1336s Preparing to unpack .../206-r-cran-crayon_1.5.3-1_all.deb ... 1336s Unpacking r-cran-crayon (1.5.3-1) ... 1336s Selecting previously unselected package r-bioc-s4arrays. 1336s Preparing to unpack .../207-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 1336s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 1336s Selecting previously unselected package r-bioc-zlibbioc. 1336s Preparing to unpack .../208-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 1336s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 1336s Selecting previously unselected package r-bioc-xvector. 1336s Preparing to unpack .../209-r-bioc-xvector_0.46.0-2_arm64.deb ... 1336s Unpacking r-bioc-xvector (0.46.0-2) ... 1336s Selecting previously unselected package r-bioc-sparsearray. 1336s Preparing to unpack .../210-r-bioc-sparsearray_1.6.2+dfsg-1_arm64.deb ... 1336s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 1336s Selecting previously unselected package r-bioc-delayedarray. 1336s Preparing to unpack .../211-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 1336s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 1336s Selecting previously unselected package r-bioc-hdf5array. 1336s Preparing to unpack .../212-r-bioc-hdf5array_1.34.0-2build1_arm64.deb ... 1336s Unpacking r-bioc-hdf5array (1.34.0-2build1) ... 1336s Selecting previously unselected package r-bioc-alabaster.matrix. 1336s Preparing to unpack .../213-r-bioc-alabaster.matrix_1.6.1+ds-2_arm64.deb ... 1336s Unpacking r-bioc-alabaster.matrix (1.6.1+ds-2) ... 1336s Selecting previously unselected package r-cran-curl. 1336s Preparing to unpack .../214-r-cran-curl_6.2.1+dfsg-1ubuntu1_arm64.deb ... 1336s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 1336s Selecting previously unselected package r-cran-mime. 1336s Preparing to unpack .../215-r-cran-mime_0.12-2_arm64.deb ... 1336s Unpacking r-cran-mime (0.12-2) ... 1336s Selecting previously unselected package r-cran-sys. 1336s Preparing to unpack .../216-r-cran-sys_3.4.3-1_arm64.deb ... 1336s Unpacking r-cran-sys (3.4.3-1) ... 1336s Selecting previously unselected package r-cran-askpass. 1336s Preparing to unpack .../217-r-cran-askpass_1.2.1-1_arm64.deb ... 1336s Unpacking r-cran-askpass (1.2.1-1) ... 1336s Selecting previously unselected package r-cran-openssl. 1336s Preparing to unpack .../218-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 1336s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 1336s Selecting previously unselected package r-cran-r6. 1336s Preparing to unpack .../219-r-cran-r6_2.6.1-1_all.deb ... 1336s Unpacking r-cran-r6 (2.6.1-1) ... 1336s Selecting previously unselected package r-cran-httr. 1336s Preparing to unpack .../220-r-cran-httr_1.4.7+dfsg-1_all.deb ... 1336s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 1336s Selecting previously unselected package r-bioc-ucsc.utils. 1336s Preparing to unpack .../221-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 1336s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 1336s Selecting previously unselected package r-bioc-genomeinfodbdata. 1336s Preparing to unpack .../222-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 1336s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 1337s Selecting previously unselected package r-bioc-genomeinfodb. 1337s Preparing to unpack .../223-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 1337s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 1337s Selecting previously unselected package r-bioc-genomicranges. 1337s Preparing to unpack .../224-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 1337s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 1337s Selecting previously unselected package r-bioc-alabaster.ranges. 1337s Preparing to unpack .../225-r-bioc-alabaster.ranges_1.6.0+ds-2_all.deb ... 1337s Unpacking r-bioc-alabaster.ranges (1.6.0+ds-2) ... 1337s Selecting previously unselected package r-bioc-biobase. 1337s Preparing to unpack .../226-r-bioc-biobase_2.66.0-2_arm64.deb ... 1337s Unpacking r-bioc-biobase (2.66.0-2) ... 1337s Selecting previously unselected package r-bioc-summarizedexperiment. 1337s Preparing to unpack .../227-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 1337s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 1337s Selecting previously unselected package r-bioc-singlecellexperiment. 1337s Preparing to unpack .../228-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ... 1337s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ... 1337s Selecting previously unselected package r-bioc-alabaster.se. 1337s Preparing to unpack .../229-r-bioc-alabaster.se_1.6.0+ds-2_all.deb ... 1337s Unpacking r-bioc-alabaster.se (1.6.0+ds-2) ... 1337s Selecting previously unselected package r-bioc-alabaster.sce. 1337s Preparing to unpack .../230-r-bioc-alabaster.sce_1.6.0+ds-2_all.deb ... 1337s Unpacking r-bioc-alabaster.sce (1.6.0+ds-2) ... 1337s Selecting previously unselected package r-cran-dbi. 1337s Preparing to unpack .../231-r-cran-dbi_1.2.3-1_all.deb ... 1337s Unpacking r-cran-dbi (1.2.3-1) ... 1337s Selecting previously unselected package r-cran-bit. 1337s Preparing to unpack .../232-r-cran-bit_4.6.0+dfsg-1_arm64.deb ... 1337s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 1337s Selecting previously unselected package r-cran-bit64. 1337s Preparing to unpack .../233-r-cran-bit64_4.6.0-1-1ubuntu2_arm64.deb ... 1337s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 1337s Selecting previously unselected package r-cran-rlang. 1337s Preparing to unpack .../234-r-cran-rlang_1.1.5-1_arm64.deb ... 1337s Unpacking r-cran-rlang (1.1.5-1) ... 1337s Selecting previously unselected package r-cran-cli. 1337s Preparing to unpack .../235-r-cran-cli_3.6.4-1_arm64.deb ... 1337s Unpacking r-cran-cli (3.6.4-1) ... 1337s Selecting previously unselected package r-cran-glue. 1337s Preparing to unpack .../236-r-cran-glue_1.8.0-1_arm64.deb ... 1337s Unpacking r-cran-glue (1.8.0-1) ... 1337s Selecting previously unselected package r-cran-lifecycle. 1337s Preparing to unpack .../237-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 1337s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 1337s Selecting previously unselected package r-cran-vctrs. 1338s Preparing to unpack .../238-r-cran-vctrs_0.6.5-1_arm64.deb ... 1338s Unpacking r-cran-vctrs (0.6.5-1) ... 1338s Selecting previously unselected package r-cran-blob. 1338s Preparing to unpack .../239-r-cran-blob_1.2.4-1_all.deb ... 1338s Unpacking r-cran-blob (1.2.4-1) ... 1338s Selecting previously unselected package r-cran-fastmap. 1338s Preparing to unpack .../240-r-cran-fastmap_1.2.0-1_arm64.deb ... 1338s Unpacking r-cran-fastmap (1.2.0-1) ... 1338s Selecting previously unselected package r-cran-cachem. 1338s Preparing to unpack .../241-r-cran-cachem_1.1.0-1_arm64.deb ... 1338s Unpacking r-cran-cachem (1.1.0-1) ... 1338s Selecting previously unselected package r-cran-memoise. 1338s Preparing to unpack .../242-r-cran-memoise_2.0.1-1_all.deb ... 1338s Unpacking r-cran-memoise (2.0.1-1) ... 1338s Selecting previously unselected package r-cran-pkgconfig. 1338s Preparing to unpack .../243-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 1338s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 1338s Selecting previously unselected package r-cran-plogr. 1338s Preparing to unpack .../244-r-cran-plogr_0.2.0-3build1_all.deb ... 1338s Unpacking r-cran-plogr (0.2.0-3build1) ... 1338s Selecting previously unselected package r-cran-cpp11. 1338s Preparing to unpack .../245-r-cran-cpp11_0.5.2-1_all.deb ... 1338s Unpacking r-cran-cpp11 (0.5.2-1) ... 1338s Selecting previously unselected package r-cran-rsqlite. 1338s Preparing to unpack .../246-r-cran-rsqlite_2.3.9-1_arm64.deb ... 1338s Unpacking r-cran-rsqlite (2.3.9-1) ... 1338s Selecting previously unselected package r-cran-png. 1338s Preparing to unpack .../247-r-cran-png_0.1-8-1build2_arm64.deb ... 1338s Unpacking r-cran-png (0.1-8-1build2) ... 1338s Selecting previously unselected package r-bioc-biostrings. 1338s Preparing to unpack .../248-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 1338s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 1338s Selecting previously unselected package r-bioc-keggrest. 1338s Preparing to unpack .../249-r-bioc-keggrest_1.46.0+dfsg-2_all.deb ... 1338s Unpacking r-bioc-keggrest (1.46.0+dfsg-2) ... 1338s Selecting previously unselected package r-bioc-annotationdbi. 1338s Preparing to unpack .../250-r-bioc-annotationdbi_1.68.0-2_all.deb ... 1338s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 1338s Selecting previously unselected package r-cran-lazyeval. 1338s Preparing to unpack .../251-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 1338s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 1338s Selecting previously unselected package r-bioc-annotationfilter. 1338s Preparing to unpack .../252-r-bioc-annotationfilter_1.30.0+dfsg-2_all.deb ... 1338s Unpacking r-bioc-annotationfilter (1.30.0+dfsg-2) ... 1338s Selecting previously unselected package r-cran-generics. 1338s Preparing to unpack .../253-r-cran-generics_0.1.3-1_all.deb ... 1338s Unpacking r-cran-generics (0.1.3-1) ... 1338s Selecting previously unselected package r-cran-magrittr. 1338s Preparing to unpack .../254-r-cran-magrittr_2.0.3-1_arm64.deb ... 1338s Unpacking r-cran-magrittr (2.0.3-1) ... 1338s Selecting previously unselected package r-cran-utf8. 1338s Preparing to unpack .../255-r-cran-utf8_1.2.4-1_arm64.deb ... 1338s Unpacking r-cran-utf8 (1.2.4-1) ... 1338s Selecting previously unselected package r-cran-pillar. 1338s Preparing to unpack .../256-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 1338s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 1339s Selecting previously unselected package r-cran-fansi. 1339s Preparing to unpack .../257-r-cran-fansi_1.0.5-1_arm64.deb ... 1339s Unpacking r-cran-fansi (1.0.5-1) ... 1339s Selecting previously unselected package r-cran-tibble. 1339s Preparing to unpack .../258-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 1339s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 1339s Selecting previously unselected package r-cran-withr. 1339s Preparing to unpack .../259-r-cran-withr_3.0.2+dfsg-1_all.deb ... 1339s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 1339s Selecting previously unselected package r-cran-tidyselect. 1339s Preparing to unpack .../260-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 1339s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 1339s Selecting previously unselected package r-cran-dplyr. 1339s Preparing to unpack .../261-r-cran-dplyr_1.1.4-4_arm64.deb ... 1339s Unpacking r-cran-dplyr (1.1.4-4) ... 1339s Selecting previously unselected package r-cran-purrr. 1339s Preparing to unpack .../262-r-cran-purrr_1.0.4-1_arm64.deb ... 1339s Unpacking r-cran-purrr (1.0.4-1) ... 1339s Selecting previously unselected package r-cran-stringi. 1339s Preparing to unpack .../263-r-cran-stringi_1.8.4-1build1_arm64.deb ... 1339s Unpacking r-cran-stringi (1.8.4-1build1) ... 1339s Selecting previously unselected package r-cran-stringr. 1339s Preparing to unpack .../264-r-cran-stringr_1.5.1-1_all.deb ... 1339s Unpacking r-cran-stringr (1.5.1-1) ... 1339s Selecting previously unselected package r-cran-tidyr. 1339s Preparing to unpack .../265-r-cran-tidyr_1.3.1-1_arm64.deb ... 1339s Unpacking r-cran-tidyr (1.3.1-1) ... 1339s Selecting previously unselected package r-cran-dbplyr. 1339s Preparing to unpack .../266-r-cran-dbplyr_2.5.0+dfsg-1_all.deb ... 1339s Unpacking r-cran-dbplyr (2.5.0+dfsg-1) ... 1339s Selecting previously unselected package r-cran-filelock. 1339s Preparing to unpack .../267-r-cran-filelock_1.0.3-1_arm64.deb ... 1339s Unpacking r-cran-filelock (1.0.3-1) ... 1339s Selecting previously unselected package r-bioc-biocfilecache. 1339s Preparing to unpack .../268-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 1339s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 1339s Selecting previously unselected package r-cran-biocmanager. 1339s Preparing to unpack .../269-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 1339s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 1339s Selecting previously unselected package r-bioc-biocversion. 1339s Preparing to unpack .../270-r-bioc-biocversion_3.20.0-2_all.deb ... 1339s Unpacking r-bioc-biocversion (3.20.0-2) ... 1339s Selecting previously unselected package r-cran-rappdirs. 1339s Preparing to unpack .../271-r-cran-rappdirs_0.3.3-1_arm64.deb ... 1339s Unpacking r-cran-rappdirs (0.3.3-1) ... 1339s Selecting previously unselected package r-cran-yaml. 1339s Preparing to unpack .../272-r-cran-yaml_2.3.10-1_arm64.deb ... 1339s Unpacking r-cran-yaml (2.3.10-1) ... 1339s Selecting previously unselected package r-bioc-annotationhub. 1339s Preparing to unpack .../273-r-bioc-annotationhub_3.14.0+dfsg-2_all.deb ... 1339s Unpacking r-bioc-annotationhub (3.14.0+dfsg-2) ... 1339s Selecting previously unselected package r-bioc-assorthead. 1339s Preparing to unpack .../274-r-bioc-assorthead_1.0.1+ds-2_all.deb ... 1339s Unpacking r-bioc-assorthead (1.0.1+ds-2) ... 1340s Selecting previously unselected package r-bioc-beachmat. 1340s Preparing to unpack .../275-r-bioc-beachmat_2.22.0+ds-2_arm64.deb ... 1340s Unpacking r-bioc-beachmat (2.22.0+ds-2) ... 1340s Selecting previously unselected package r-bioc-biocio. 1340s Preparing to unpack .../276-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 1340s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 1340s Selecting previously unselected package r-bioc-biocneighbors. 1340s Preparing to unpack .../277-r-bioc-biocneighbors_2.0.1+ds-2_arm64.deb ... 1340s Unpacking r-bioc-biocneighbors (2.0.1+ds-2) ... 1340s Selecting previously unselected package r-cran-formatr. 1340s Preparing to unpack .../278-r-cran-formatr_1.14-2_all.deb ... 1340s Unpacking r-cran-formatr (1.14-2) ... 1340s Selecting previously unselected package r-cran-lambda.r. 1340s Preparing to unpack .../279-r-cran-lambda.r_1.2.4-2build1_all.deb ... 1340s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 1340s Selecting previously unselected package r-cran-futile.options. 1340s Preparing to unpack .../280-r-cran-futile.options_1.0.1-3build1_all.deb ... 1340s Unpacking r-cran-futile.options (1.0.1-3build1) ... 1340s Selecting previously unselected package r-cran-futile.logger. 1340s Preparing to unpack .../281-r-cran-futile.logger_1.4.3-4build1_all.deb ... 1340s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 1340s Selecting previously unselected package r-cran-snow. 1340s Preparing to unpack .../282-r-cran-snow_1%3a0.4.4-2_all.deb ... 1340s Unpacking r-cran-snow (1:0.4.4-2) ... 1340s Selecting previously unselected package r-cran-codetools. 1340s Preparing to unpack .../283-r-cran-codetools_0.2-20-1_all.deb ... 1340s Unpacking r-cran-codetools (0.2-20-1) ... 1340s Selecting previously unselected package r-cran-bh. 1340s Preparing to unpack .../284-r-cran-bh_1.84.0-1_all.deb ... 1340s Unpacking r-cran-bh (1.84.0-1) ... 1340s Selecting previously unselected package r-bioc-biocparallel. 1340s Preparing to unpack .../285-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 1340s Unpacking r-bioc-biocparallel (1.40.0-2) ... 1340s Selecting previously unselected package r-bioc-scaledmatrix. 1340s Preparing to unpack .../286-r-bioc-scaledmatrix_1.14.0+dfsg-2_all.deb ... 1340s Unpacking r-bioc-scaledmatrix (1.14.0+dfsg-2) ... 1340s Selecting previously unselected package r-cran-irlba. 1340s Preparing to unpack .../287-r-cran-irlba_2.3.5.1-4_arm64.deb ... 1340s Unpacking r-cran-irlba (2.3.5.1-4) ... 1340s Selecting previously unselected package r-cran-rsvd. 1340s Preparing to unpack .../288-r-cran-rsvd_1.0.5-1_all.deb ... 1340s Unpacking r-cran-rsvd (1.0.5-1) ... 1340s Selecting previously unselected package r-bioc-biocsingular. 1340s Preparing to unpack .../289-r-bioc-biocsingular_1.22.0+ds-2_arm64.deb ... 1340s Unpacking r-bioc-biocsingular (1.22.0+ds-2) ... 1340s Selecting previously unselected package r-cran-base64enc. 1340s Preparing to unpack .../290-r-cran-base64enc_0.1-3-3_arm64.deb ... 1340s Unpacking r-cran-base64enc (0.1-3-3) ... 1340s Selecting previously unselected package r-cran-digest. 1340s Preparing to unpack .../291-r-cran-digest_0.6.37-1_arm64.deb ... 1340s Unpacking r-cran-digest (0.6.37-1) ... 1340s Selecting previously unselected package r-cran-htmltools. 1340s Preparing to unpack .../292-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 1340s Unpacking r-cran-htmltools (0.5.8.1-1) ... 1341s Selecting previously unselected package r-cran-evaluate. 1341s Preparing to unpack .../293-r-cran-evaluate_1.0.3-1_all.deb ... 1341s Unpacking r-cran-evaluate (1.0.3-1) ... 1341s Selecting previously unselected package r-cran-xfun. 1341s Preparing to unpack .../294-r-cran-xfun_0.51+dfsg-1_arm64.deb ... 1341s Unpacking r-cran-xfun (0.51+dfsg-1) ... 1341s Selecting previously unselected package r-cran-highr. 1341s Preparing to unpack .../295-r-cran-highr_0.11+dfsg-1_all.deb ... 1341s Unpacking r-cran-highr (0.11+dfsg-1) ... 1341s Selecting previously unselected package libjs-mathjax. 1341s Preparing to unpack .../296-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 1341s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 1341s Selecting previously unselected package r-cran-knitr. 1341s Preparing to unpack .../297-r-cran-knitr_1.49+dfsg-1_all.deb ... 1341s Unpacking r-cran-knitr (1.49+dfsg-1) ... 1341s Selecting previously unselected package r-cran-jquerylib. 1341s Preparing to unpack .../298-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 1341s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 1341s Selecting previously unselected package r-cran-fs. 1341s Preparing to unpack .../299-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 1341s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 1341s Selecting previously unselected package r-cran-sass. 1342s Preparing to unpack .../300-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 1342s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 1342s Selecting previously unselected package r-cran-bslib. 1342s Preparing to unpack .../301-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 1342s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 1342s Selecting previously unselected package r-cran-fontawesome. 1342s Preparing to unpack .../302-r-cran-fontawesome_0.5.3-1_all.deb ... 1342s Unpacking r-cran-fontawesome (0.5.3-1) ... 1342s Selecting previously unselected package r-cran-tinytex. 1342s Preparing to unpack .../303-r-cran-tinytex_0.56-1_all.deb ... 1342s Unpacking r-cran-tinytex (0.56-1) ... 1342s Selecting previously unselected package libjs-modernizr. 1342s Preparing to unpack .../304-libjs-modernizr_3.13.0-0.1_all.deb ... 1342s Unpacking libjs-modernizr (3.13.0-0.1) ... 1342s Selecting previously unselected package r-cran-later. 1342s Preparing to unpack .../305-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 1342s Unpacking r-cran-later (1.4.1+dfsg-1) ... 1342s Selecting previously unselected package r-cran-promises. 1342s Preparing to unpack .../306-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 1342s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 1342s Selecting previously unselected package r-cran-httpuv. 1342s Preparing to unpack .../307-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 1342s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 1342s Selecting previously unselected package r-cran-xtable. 1342s Preparing to unpack .../308-r-cran-xtable_1%3a1.8-4-2_all.deb ... 1342s Unpacking r-cran-xtable (1:1.8-4-2) ... 1342s Selecting previously unselected package r-cran-sourcetools. 1342s Preparing to unpack .../309-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 1342s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 1342s Selecting previously unselected package r-cran-commonmark. 1342s Preparing to unpack .../310-r-cran-commonmark_1.9.2-2_arm64.deb ... 1342s Unpacking r-cran-commonmark (1.9.2-2) ... 1342s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 1342s Preparing to unpack .../311-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 1342s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1342s Selecting previously unselected package r-cran-shiny. 1342s Preparing to unpack .../312-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 1342s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 1342s Selecting previously unselected package r-cran-rmarkdown. 1342s Preparing to unpack .../313-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 1342s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 1343s Selecting previously unselected package r-cran-bookdown. 1343s Preparing to unpack .../314-r-cran-bookdown_0.42+dfsg-1_all.deb ... 1343s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 1343s Selecting previously unselected package tex-common. 1343s Preparing to unpack .../315-tex-common_6.19_all.deb ... 1343s Unpacking tex-common (6.19) ... 1343s Selecting previously unselected package t1utils. 1343s Preparing to unpack .../316-t1utils_1.41-4build3_arm64.deb ... 1343s Unpacking t1utils (1.41-4build3) ... 1343s Selecting previously unselected package texlive-binaries. 1343s Preparing to unpack .../317-texlive-binaries_2024.20240313.70630+ds-5build2_arm64.deb ... 1343s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ... 1343s Selecting previously unselected package texlive-base. 1343s Preparing to unpack .../318-texlive-base_2024.20250114-1_all.deb ... 1343s Unpacking texlive-base (2024.20250114-1) ... 1344s Selecting previously unselected package texlive-latex-base. 1344s Preparing to unpack .../319-texlive-latex-base_2024.20250114-1_all.deb ... 1344s Unpacking texlive-latex-base (2024.20250114-1) ... 1344s Selecting previously unselected package texlive-bibtex-extra. 1344s Preparing to unpack .../320-texlive-bibtex-extra_2024.20250114-1_all.deb ... 1344s Unpacking texlive-bibtex-extra (2024.20250114-1) ... 1347s Selecting previously unselected package r-bioc-biocstyle. 1347s Preparing to unpack .../321-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 1347s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 1347s Selecting previously unselected package r-cran-cluster. 1347s Preparing to unpack .../322-r-cran-cluster_2.1.8-1_arm64.deb ... 1347s Unpacking r-cran-cluster (2.1.8-1) ... 1347s Selecting previously unselected package r-cran-igraph. 1347s Preparing to unpack .../323-r-cran-igraph_2.1.4-1_arm64.deb ... 1347s Unpacking r-cran-igraph (2.1.4-1) ... 1347s Selecting previously unselected package r-bioc-bluster. 1347s Preparing to unpack .../324-r-bioc-bluster_1.16.0+dfsg-2_arm64.deb ... 1347s Unpacking r-bioc-bluster (1.16.0+dfsg-2) ... 1347s Selecting previously unselected package r-bioc-sparsematrixstats. 1347s Preparing to unpack .../325-r-bioc-sparsematrixstats_1.18.0+dfsg-2_arm64.deb ... 1347s Unpacking r-bioc-sparsematrixstats (1.18.0+dfsg-2) ... 1347s Selecting previously unselected package r-bioc-delayedmatrixstats. 1347s Preparing to unpack .../326-r-bioc-delayedmatrixstats_1.28.1+ds-1_all.deb ... 1347s Unpacking r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 1347s Selecting previously unselected package r-cran-locfit. 1347s Preparing to unpack .../327-r-cran-locfit_1.5-9.12-1_arm64.deb ... 1347s Unpacking r-cran-locfit (1.5-9.12-1) ... 1347s Selecting previously unselected package r-cran-gtable. 1347s Preparing to unpack .../328-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 1347s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 1347s Selecting previously unselected package r-cran-isoband. 1347s Preparing to unpack .../329-r-cran-isoband_0.2.7-1_arm64.deb ... 1347s Unpacking r-cran-isoband (0.2.7-1) ... 1347s Selecting previously unselected package r-cran-mass. 1347s Preparing to unpack .../330-r-cran-mass_7.3-64-1_arm64.deb ... 1347s Unpacking r-cran-mass (7.3-64-1) ... 1347s Selecting previously unselected package r-cran-nlme. 1347s Preparing to unpack .../331-r-cran-nlme_3.1.167-1_arm64.deb ... 1347s Unpacking r-cran-nlme (3.1.167-1) ... 1348s Selecting previously unselected package r-cran-mgcv. 1348s Preparing to unpack .../332-r-cran-mgcv_1.9-1-1_arm64.deb ... 1348s Unpacking r-cran-mgcv (1.9-1-1) ... 1348s Selecting previously unselected package r-cran-farver. 1348s Preparing to unpack .../333-r-cran-farver_2.1.2-1_arm64.deb ... 1348s Unpacking r-cran-farver (2.1.2-1) ... 1348s Selecting previously unselected package r-cran-labeling. 1348s Preparing to unpack .../334-r-cran-labeling_0.4.3-1_all.deb ... 1348s Unpacking r-cran-labeling (0.4.3-1) ... 1348s Selecting previously unselected package r-cran-colorspace. 1348s Preparing to unpack .../335-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 1348s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 1348s Selecting previously unselected package r-cran-munsell. 1348s Preparing to unpack .../336-r-cran-munsell_0.5.1-1_all.deb ... 1348s Unpacking r-cran-munsell (0.5.1-1) ... 1348s Selecting previously unselected package r-cran-rcolorbrewer. 1348s Preparing to unpack .../337-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 1348s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 1348s Selecting previously unselected package r-cran-viridislite. 1348s Preparing to unpack .../338-r-cran-viridislite_0.4.2-2_all.deb ... 1348s Unpacking r-cran-viridislite (0.4.2-2) ... 1348s Selecting previously unselected package r-cran-scales. 1348s Preparing to unpack .../339-r-cran-scales_1.3.0-1_all.deb ... 1348s Unpacking r-cran-scales (1.3.0-1) ... 1348s Selecting previously unselected package r-cran-ggplot2. 1348s Preparing to unpack .../340-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 1348s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 1348s Selecting previously unselected package r-cran-rcpparmadillo. 1348s Preparing to unpack .../341-r-cran-rcpparmadillo_14.2.3-1-1_arm64.deb ... 1348s Unpacking r-cran-rcpparmadillo (14.2.3-1-1) ... 1348s Selecting previously unselected package r-bioc-deseq2. 1348s Preparing to unpack .../342-r-bioc-deseq2_1.46.0+dfsg-2_arm64.deb ... 1348s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 1348s Selecting previously unselected package r-cran-statmod. 1348s Preparing to unpack .../343-r-cran-statmod_1.5.0-1_arm64.deb ... 1348s Unpacking r-cran-statmod (1.5.0-1) ... 1348s Selecting previously unselected package r-bioc-limma. 1348s Preparing to unpack .../344-r-bioc-limma_3.62.2+dfsg-1_arm64.deb ... 1348s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 1348s Selecting previously unselected package r-bioc-edger. 1348s Preparing to unpack .../345-r-bioc-edger_4.4.2+dfsg-1_arm64.deb ... 1348s Unpacking r-bioc-edger (4.4.2+dfsg-1) ... 1349s Selecting previously unselected package r-cran-xml. 1349s Preparing to unpack .../346-r-cran-xml_3.99-0.18-1_arm64.deb ... 1349s Unpacking r-cran-xml (3.99-0.18-1) ... 1349s Selecting previously unselected package r-cran-bitops. 1349s Preparing to unpack .../347-r-cran-bitops_1.0-9-1_arm64.deb ... 1349s Unpacking r-cran-bitops (1.0-9-1) ... 1349s Selecting previously unselected package r-bioc-rhtslib. 1349s Preparing to unpack .../348-r-bioc-rhtslib_3.2.0+dfsg-2_arm64.deb ... 1349s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 1349s Selecting previously unselected package r-bioc-rsamtools. 1349s Preparing to unpack .../349-r-bioc-rsamtools_2.22.0+dfsg-2_arm64.deb ... 1349s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 1349s Selecting previously unselected package r-bioc-genomicalignments. 1349s Preparing to unpack .../350-r-bioc-genomicalignments_1.42.0-2_arm64.deb ... 1349s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 1349s Selecting previously unselected package r-cran-rcurl. 1349s Preparing to unpack .../351-r-cran-rcurl_1.98-1.16+dfsg-1_arm64.deb ... 1349s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 1349s Selecting previously unselected package r-cran-rjson. 1349s Preparing to unpack .../352-r-cran-rjson_0.2.23-1_arm64.deb ... 1349s Unpacking r-cran-rjson (0.2.23-1) ... 1349s Selecting previously unselected package r-cran-restfulr. 1349s Preparing to unpack .../353-r-cran-restfulr_0.0.15-1_arm64.deb ... 1349s Unpacking r-cran-restfulr (0.0.15-1) ... 1349s Selecting previously unselected package r-bioc-rtracklayer. 1349s Preparing to unpack .../354-r-bioc-rtracklayer_1.66.0-2_arm64.deb ... 1349s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 1349s Selecting previously unselected package r-bioc-genomicfeatures. 1349s Preparing to unpack .../355-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ... 1349s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 1349s Selecting previously unselected package r-bioc-protgenerics. 1349s Preparing to unpack .../356-r-bioc-protgenerics_1.38.0-2_all.deb ... 1349s Unpacking r-bioc-protgenerics (1.38.0-2) ... 1349s Selecting previously unselected package r-bioc-ensembldb. 1349s Preparing to unpack .../357-r-bioc-ensembldb_2.30.0+dfsg-3_all.deb ... 1349s Unpacking r-bioc-ensembldb (2.30.0+dfsg-3) ... 1349s Selecting previously unselected package r-bioc-experimenthub. 1349s Preparing to unpack .../358-r-bioc-experimenthub_2.14.0+ds-2_all.deb ... 1349s Unpacking r-bioc-experimenthub (2.14.0+ds-2) ... 1349s Selecting previously unselected package r-cran-httr2. 1349s Preparing to unpack .../359-r-cran-httr2_1.1.1-1_all.deb ... 1349s Unpacking r-cran-httr2 (1.1.1-1) ... 1349s Selecting previously unselected package r-bioc-gypsum. 1350s Preparing to unpack .../360-r-bioc-gypsum_1.2.0+ds-2_all.deb ... 1350s Unpacking r-bioc-gypsum (1.2.0+ds-2) ... 1350s Selecting previously unselected package r-bioc-metapod. 1350s Preparing to unpack .../361-r-bioc-metapod_1.14.0+dfsg-2_arm64.deb ... 1350s Unpacking r-bioc-metapod (1.14.0+dfsg-2) ... 1350s Selecting previously unselected package r-bioc-residualmatrix. 1350s Preparing to unpack .../362-r-bioc-residualmatrix_1.16.0+dfsg-2_all.deb ... 1350s Unpacking r-bioc-residualmatrix (1.16.0+dfsg-2) ... 1350s Selecting previously unselected package r-bioc-scuttle. 1350s Preparing to unpack .../363-r-bioc-scuttle_1.16.0+dfsg-3_arm64.deb ... 1350s Unpacking r-bioc-scuttle (1.16.0+dfsg-3) ... 1350s Selecting previously unselected package r-cran-beeswarm. 1350s Preparing to unpack .../364-r-cran-beeswarm_0.4.0-1_arm64.deb ... 1350s Unpacking r-cran-beeswarm (0.4.0-1) ... 1350s Selecting previously unselected package r-cran-vipor. 1350s Preparing to unpack .../365-r-cran-vipor_0.4.7-1_all.deb ... 1350s Unpacking r-cran-vipor (0.4.7-1) ... 1350s Selecting previously unselected package r-cran-ggbeeswarm. 1350s Preparing to unpack .../366-r-cran-ggbeeswarm_0.7.2-1_all.deb ... 1350s Unpacking r-cran-ggbeeswarm (0.7.2-1) ... 1350s Selecting previously unselected package r-cran-gridextra. 1350s Preparing to unpack .../367-r-cran-gridextra_2.3-3build1_all.deb ... 1350s Unpacking r-cran-gridextra (2.3-3build1) ... 1350s Selecting previously unselected package r-cran-viridis. 1350s Preparing to unpack .../368-r-cran-viridis_0.6.5-1_all.deb ... 1350s Unpacking r-cran-viridis (0.6.5-1) ... 1350s Selecting previously unselected package r-cran-rtsne. 1350s Preparing to unpack .../369-r-cran-rtsne_0.17-1_arm64.deb ... 1350s Unpacking r-cran-rtsne (0.17-1) ... 1350s Selecting previously unselected package r-cran-rcppeigen. 1350s Preparing to unpack .../370-r-cran-rcppeigen_0.3.4.0.2-1_arm64.deb ... 1350s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 1350s Selecting previously unselected package r-cran-rcppml. 1350s Preparing to unpack .../371-r-cran-rcppml_0.3.7-2_arm64.deb ... 1350s Unpacking r-cran-rcppml (0.3.7-2) ... 1350s Selecting previously unselected package r-cran-fnn. 1350s Preparing to unpack .../372-r-cran-fnn_1.1.4.1-1_arm64.deb ... 1350s Unpacking r-cran-fnn (1.1.4.1-1) ... 1350s Selecting previously unselected package r-cran-rcppannoy. 1350s Preparing to unpack .../373-r-cran-rcppannoy_0.0.22-1_arm64.deb ... 1350s Unpacking r-cran-rcppannoy (0.0.22-1) ... 1350s Selecting previously unselected package r-cran-rspectra. 1350s Preparing to unpack .../374-r-cran-rspectra_0.16-2-1_arm64.deb ... 1350s Unpacking r-cran-rspectra (0.16-2-1) ... 1350s Selecting previously unselected package r-cran-sitmo. 1350s Preparing to unpack .../375-r-cran-sitmo_2.0.2-1_arm64.deb ... 1350s Unpacking r-cran-sitmo (2.0.2-1) ... 1351s Selecting previously unselected package r-cran-dqrng. 1351s Preparing to unpack .../376-r-cran-dqrng_0.3.2+dfsg-1_arm64.deb ... 1351s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 1351s Selecting previously unselected package r-cran-rcppprogress. 1351s Preparing to unpack .../377-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 1351s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 1351s Selecting previously unselected package r-cran-uwot. 1351s Preparing to unpack .../378-r-cran-uwot_0.2.3-1_arm64.deb ... 1351s Unpacking r-cran-uwot (0.2.3-1) ... 1351s Selecting previously unselected package r-cran-pheatmap. 1351s Preparing to unpack .../379-r-cran-pheatmap_1.0.12-2build1_all.deb ... 1351s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 1351s Selecting previously unselected package r-cran-ggrepel. 1351s Preparing to unpack .../380-r-cran-ggrepel_0.9.6-1_arm64.deb ... 1351s Unpacking r-cran-ggrepel (0.9.6-1) ... 1351s Selecting previously unselected package r-cran-cairo. 1351s Preparing to unpack .../381-r-cran-cairo_1.6-2-1_arm64.deb ... 1351s Unpacking r-cran-cairo (1.6-2-1) ... 1351s Selecting previously unselected package r-cran-systemfonts. 1351s Preparing to unpack .../382-r-cran-systemfonts_1.2.1-1_arm64.deb ... 1351s Unpacking r-cran-systemfonts (1.2.1-1) ... 1351s Selecting previously unselected package r-cran-textshaping. 1351s Preparing to unpack .../383-r-cran-textshaping_0.3.7-2_arm64.deb ... 1351s Unpacking r-cran-textshaping (0.3.7-2) ... 1351s Selecting previously unselected package r-cran-ragg. 1351s Preparing to unpack .../384-r-cran-ragg_1.3.3-1_arm64.deb ... 1351s Unpacking r-cran-ragg (1.3.3-1) ... 1351s Selecting previously unselected package r-cran-ggrastr. 1351s Preparing to unpack .../385-r-cran-ggrastr_1.0.2-1_all.deb ... 1351s Unpacking r-cran-ggrastr (1.0.2-1) ... 1351s Selecting previously unselected package r-bioc-scater. 1351s Preparing to unpack .../386-r-bioc-scater_1.34.1+ds-1_all.deb ... 1351s Unpacking r-bioc-scater (1.34.1+ds-1) ... 1351s Selecting previously unselected package r-bioc-scran. 1351s Preparing to unpack .../387-r-bioc-scran_1.34.0+dfsg-3_arm64.deb ... 1351s Unpacking r-bioc-scran (1.34.0+dfsg-3) ... 1351s Selecting previously unselected package r-bioc-scrnaseq. 1351s Preparing to unpack .../388-r-bioc-scrnaseq_2.20.0+ds-2_all.deb ... 1351s Unpacking r-bioc-scrnaseq (2.20.0+ds-2) ... 1351s Selecting previously unselected package r-cran-brio. 1351s Preparing to unpack .../389-r-cran-brio_1.1.5-1_arm64.deb ... 1351s Unpacking r-cran-brio (1.1.5-1) ... 1351s Selecting previously unselected package r-cran-ps. 1351s Preparing to unpack .../390-r-cran-ps_1.9.0-1_arm64.deb ... 1351s Unpacking r-cran-ps (1.9.0-1) ... 1351s Selecting previously unselected package r-cran-processx. 1351s Preparing to unpack .../391-r-cran-processx_3.8.6-1_arm64.deb ... 1351s Unpacking r-cran-processx (3.8.6-1) ... 1352s Selecting previously unselected package r-cran-callr. 1352s Preparing to unpack .../392-r-cran-callr_3.7.6-1_all.deb ... 1352s Unpacking r-cran-callr (3.7.6-1) ... 1352s Selecting previously unselected package r-cran-desc. 1352s Preparing to unpack .../393-r-cran-desc_1.4.3-1_all.deb ... 1352s Unpacking r-cran-desc (1.4.3-1) ... 1352s Selecting previously unselected package r-cran-diffobj. 1352s Preparing to unpack .../394-r-cran-diffobj_0.3.5-1_arm64.deb ... 1352s Unpacking r-cran-diffobj (0.3.5-1) ... 1352s Selecting previously unselected package r-cran-dynamictreecut. 1352s Preparing to unpack .../395-r-cran-dynamictreecut_1.63-1-3build1_all.deb ... 1352s Unpacking r-cran-dynamictreecut (1.63-1-3build1) ... 1352s Selecting previously unselected package r-cran-pkgbuild. 1352s Preparing to unpack .../396-r-cran-pkgbuild_1.4.6-1_all.deb ... 1352s Unpacking r-cran-pkgbuild (1.4.6-1) ... 1352s Selecting previously unselected package r-cran-rprojroot. 1352s Preparing to unpack .../397-r-cran-rprojroot_2.0.4-2_all.deb ... 1352s Unpacking r-cran-rprojroot (2.0.4-2) ... 1352s Selecting previously unselected package r-cran-pkgload. 1352s Preparing to unpack .../398-r-cran-pkgload_1.4.0-1_all.deb ... 1352s Unpacking r-cran-pkgload (1.4.0-1) ... 1352s Selecting previously unselected package r-cran-praise. 1352s Preparing to unpack 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1357s Setting up r-cran-desc (1.4.3-1) ... 1357s Setting up r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 1357s Setting up r-cran-munsell (0.5.1-1) ... 1357s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 1357s Setting up r-cran-fontawesome (0.5.3-1) ... 1357s Setting up r-cran-igraph (2.1.4-1) ... 1357s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 1357s Setting up gfortran (4:14.2.0-1ubuntu1) ... 1357s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 1357s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 1357s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 1357s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 1357s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 1357s Setting up 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... 1357s Setting up r-cran-uwot (0.2.3-1) ... 1357s Setting up r-cran-pheatmap (1.0.12-2build1) ... 1357s Setting up r-cran-pkgload (1.4.0-1) ... 1357s Setting up r-base-dev (4.4.3-1) ... 1357s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 1357s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 1357s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 1357s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 1357s Setting up r-cran-textshaping (0.3.7-2) ... 1357s Setting up r-cran-viridis (0.6.5-1) ... 1357s Setting up r-cran-testthat (3.2.3-1) ... 1357s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 1357s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 1357s Setting up r-cran-ragg (1.3.3-1) ... 1357s Setting up r-cran-ggrepel (0.9.6-1) ... 1357s Setting up r-cran-tidyr (1.3.1-1) ... 1357s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 1357s Setting up r-cran-dbplyr (2.5.0+dfsg-1) ... 1357s Setting up r-cran-ggbeeswarm (0.7.2-1) ... 1357s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 1357s Setting up r-bioc-hdf5array (1.34.0-2build1) ... 1357s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... 1357s Setting up r-bioc-residualmatrix (1.16.0+dfsg-2) ... 1357s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 1357s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 1357s Setting up r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 1357s Setting up r-bioc-annotationfilter (1.30.0+dfsg-2) ... 1357s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 1357s Setting up r-bioc-alabaster.matrix (1.6.1+ds-2) ... 1357s Setting up r-cran-ggrastr (1.0.2-1) ... 1357s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 1357s Setting up r-bioc-beachmat (2.22.0+ds-2) ... 1357s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 1357s Setting up r-bioc-scaledmatrix (1.14.0+dfsg-2) ... 1357s Setting up r-cran-bookdown (0.42+dfsg-1) ... 1357s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 1357s Setting up r-bioc-keggrest (1.46.0+dfsg-2) ... 1357s Setting up r-bioc-biocsingular (1.22.0+ds-2) ... 1357s Setting up r-bioc-alabaster.ranges (1.6.0+ds-2) ... 1357s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... 1357s Setting up r-bioc-annotationdbi (1.68.0-2) ... 1357s Setting up r-bioc-annotationhub (3.14.0+dfsg-2) ... 1357s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 1357s Setting up r-bioc-genomicalignments (1.42.0-2) ... 1357s Setting up r-bioc-alabaster.se (1.6.0+ds-2) ... 1357s Setting up r-bioc-rtracklayer (1.66.0-2) ... 1357s Setting up r-bioc-singlecellexperiment (1.28.1+ds-2) ... 1357s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 1357s Setting up r-bioc-experimenthub (2.14.0+ds-2) ... 1357s Setting up r-bioc-scuttle (1.16.0+dfsg-3) ... 1357s Setting up r-bioc-alabaster.sce (1.6.0+ds-2) ... 1357s Setting up r-bioc-ensembldb (2.30.0+dfsg-3) ... 1357s Setting up r-bioc-scran (1.34.0+dfsg-3) ... 1357s Setting up r-bioc-scrnaseq (2.20.0+ds-2) ... 1357s Setting up r-bioc-scater (1.34.1+ds-1) ... 1357s Processing triggers for libc-bin (2.41-1ubuntu2) ... 1358s Processing triggers for man-db (2.13.0-1) ... 1359s Processing triggers for install-info (7.1.1-1) ... 1359s Processing triggers for tex-common (6.19) ... 1360s Running updmap-sys. This may take some time... done. 1360s Running mktexlsr /var/lib/texmf ... done. 1360s Building format(s) --all. 1397s This may take some time... done. 1398s autopkgtest [15:33:46]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1398s autopkgtest [15:33:46]: test pkg-r-autopkgtest: [----------------------- 1399s Test: Try to load the R library scran 1399s 1399s R version 4.4.3 (2025-02-28) -- "Trophy Case" 1399s Copyright (C) 2025 The R Foundation for Statistical Computing 1399s Platform: aarch64-unknown-linux-gnu 1399s 1399s R is free software and comes with ABSOLUTELY NO WARRANTY. 1399s You are welcome to redistribute it under certain conditions. 1399s Type 'license()' or 'licence()' for distribution details. 1399s 1399s R is a collaborative project with many contributors. 1399s Type 'contributors()' for more information and 1399s 'citation()' on how to cite R or R packages in publications. 1399s 1399s Type 'demo()' for some demos, 'help()' for on-line help, or 1399s 'help.start()' for an HTML browser interface to help. 1399s Type 'q()' to quit R. 1399s 1399s > library('scran') 1399s Loading required package: SingleCellExperiment 1399s Loading required package: SummarizedExperiment 1399s Loading required package: MatrixGenerics 1399s Loading required package: matrixStats 1399s 1399s Attaching package: ‘MatrixGenerics’ 1399s 1399s The following objects are masked from ‘package:matrixStats’: 1399s 1399s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 1399s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 1399s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 1399s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 1399s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 1399s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 1399s colWeightedMeans, colWeightedMedians, colWeightedSds, 1399s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 1399s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 1399s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 1399s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 1399s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 1399s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 1399s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 1399s rowWeightedSds, rowWeightedVars 1399s 1399s Loading required package: GenomicRanges 1399s Loading required package: stats4 1399s Loading required package: BiocGenerics 1399s 1399s Attaching package: ‘BiocGenerics’ 1399s 1399s The following objects are masked from ‘package:stats’: 1399s 1399s IQR, mad, sd, var, xtabs 1399s 1399s The following objects are masked from ‘package:base’: 1399s 1399s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 1399s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 1399s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 1399s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 1399s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 1399s table, tapply, union, unique, unsplit, which.max, which.min 1399s 1399s Loading required package: S4Vectors 1400s 1400s Attaching package: ‘S4Vectors’ 1400s 1400s The following object is masked from ‘package:utils’: 1400s 1400s findMatches 1400s 1400s The following objects are masked from ‘package:base’: 1400s 1400s expand.grid, I, unname 1400s 1400s Loading required package: IRanges 1400s Loading required package: GenomeInfoDb 1401s Loading required package: Biobase 1401s Welcome to Bioconductor 1401s 1401s Vignettes contain introductory material; view with 1401s 'browseVignettes()'. To cite Bioconductor, see 1401s 'citation("Biobase")', and for packages 'citation("pkgname")'. 1401s 1401s 1401s Attaching package: ‘Biobase’ 1401s 1401s The following object is masked from ‘package:MatrixGenerics’: 1401s 1401s rowMedians 1401s 1401s The following objects are masked from ‘package:matrixStats’: 1401s 1401s anyMissing, rowMedians 1401s 1405s Loading required package: scuttle 1406s > 1406s > 1406s Other tests are currently unsupported! 1406s They will be progressively added. 1406s autopkgtest [15:33:54]: test pkg-r-autopkgtest: -----------------------] 1407s pkg-r-autopkgtest PASS 1407s autopkgtest [15:33:55]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1407s autopkgtest [15:33:55]: @@@@@@@@@@@@@@@@@@@@ summary 1407s pkg-r-autopkgtest PASS 1412s nova [W] Using flock in prodstack6-arm64 1412s Creating nova instance adt-plucky-arm64-r-bioc-scran-20250315-151028-juju-7f2275-prod-proposed-migration-environment-15-c22cdbe3-4b01-4d18-88be-5130575126fa from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 1412s nova [W] Timed out waiting for 4ee057bd-9305-4b75-a0de-8521d4904062 to get deleted.