0s autopkgtest [15:15:52]: starting date and time: 2025-03-15 15:15:52+0000 0s autopkgtest [15:15:52]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:15:52]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.zxbkqr_e/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-s4arrays --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-40.secgroup --name adt-plucky-arm64-r-bioc-s4arrays-20250315-151552-juju-7f2275-prod-proposed-migration-environment-2-57d5923d-b5a7-430a-b050-990b8651e488 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 134s autopkgtest [15:18:06]: testbed dpkg architecture: arm64 134s autopkgtest [15:18:06]: testbed apt version: 2.9.33 135s autopkgtest [15:18:07]: @@@@@@@@@@@@@@@@@@@@ test bed setup 135s autopkgtest [15:18:07]: testbed release detected to be: None 136s autopkgtest [15:18:08]: updating testbed package index (apt update) 136s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 137s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 137s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 137s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 137s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 137s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 137s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 137s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [78.2 kB] 137s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1976 B] 137s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 137s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [346 kB] 137s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [15.8 kB] 137s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 137s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [572 B] 138s Fetched 1094 kB in 1s (897 kB/s) 139s Reading package lists... 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 141s Calculating upgrade... 141s Calculating upgrade... 141s The following packages will be upgraded: 141s python3-jinja2 strace 141s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 141s Need to get 608 kB of archives. 141s After this operation, 11.3 kB of additional disk space will be used. 141s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 142s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 142s Fetched 608 kB in 1s (761 kB/s) 143s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 143s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 143s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 143s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 143s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 143s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 143s Setting up strace (6.13+ds-1ubuntu1) ... 143s Processing triggers for man-db (2.13.0-1) ... 144s Reading package lists... 145s Building dependency tree... 145s Reading state information... 146s Solving dependencies... 146s The following packages will be REMOVED: 146s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 146s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 146s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 146s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 147s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 147s After this operation, 267 MB disk space will be freed. 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 147s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 147s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 147s Removing libpython3.12t64:arm64 (3.12.9-1) ... 147s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 147s Removing libnsl2:arm64 (1.3.0-3build3) ... 147s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 147s Removing libunwind8:arm64 (1.6.2-3.1) ... 147s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 148s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 149s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 150s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 150s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 150s /etc/kernel/postrm.d/initramfs-tools: 150s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 150s /etc/kernel/postrm.d/zz-flash-kernel: 150s flash-kernel: Kernel 6.11.0-8-generic has been removed. 150s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 150s /etc/kernel/postrm.d/zz-update-grub: 150s Sourcing file `/etc/default/grub' 150s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 150s Generating grub configuration file ... 150s Found linux image: /boot/vmlinuz-6.14.0-10-generic 150s Found initrd image: /boot/initrd.img-6.14.0-10-generic 151s Warning: os-prober will not be executed to detect other bootable partitions. 151s Systems on them will not be added to the GRUB boot configuration. 151s Check GRUB_DISABLE_OS_PROBER documentation entry. 151s Adding boot menu entry for UEFI Firmware Settings ... 151s done 151s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 151s Processing triggers for libc-bin (2.41-1ubuntu1) ... 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 151s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 152s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 152s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 152s autopkgtest [15:18:24]: upgrading testbed (apt dist-upgrade and autopurge) 152s Reading package lists... 153s Building dependency tree... 153s Reading state information... 154s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 154s Starting 2 pkgProblemResolver with broken count: 0 154s Done 155s Entering ResolveByKeep 155s 155s Calculating upgrade... 156s The following packages will be upgraded: 156s libc-bin libc-dev-bin libc6 libc6-dev locales 156s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 156s Need to get 9530 kB of archives. 156s After this operation, 0 B of additional disk space will be used. 156s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 157s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 157s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 158s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 158s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 160s Preconfiguring packages ... 160s Fetched 9530 kB in 4s (2553 kB/s) 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 160s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 160s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 160s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 160s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 160s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 160s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 161s Setting up libc6:arm64 (2.41-1ubuntu2) ... 161s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 161s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 161s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 161s Setting up libc-bin (2.41-1ubuntu2) ... 161s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 161s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 161s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 161s Setting up locales (2.41-1ubuntu2) ... 162s Generating locales (this might take a while)... 164s en_US.UTF-8... done 164s Generation complete. 164s Setting up libc-dev-bin (2.41-1ubuntu2) ... 164s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 164s Processing triggers for man-db (2.13.0-1) ... 165s Processing triggers for systemd (257.3-1ubuntu3) ... 166s Reading package lists... 166s Building dependency tree... 166s Reading state information... 167s Starting pkgProblemResolver with broken count: 0 167s Starting 2 pkgProblemResolver with broken count: 0 167s Done 167s Solving dependencies... 168s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 168s autopkgtest [15:18:40]: rebooting testbed after setup commands that affected boot 192s autopkgtest [15:19:04]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 195s autopkgtest [15:19:07]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-s4arrays 197s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-s4arrays 1.6.0+dfsg-2 (dsc) [2267 B] 197s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-s4arrays 1.6.0+dfsg-2 (tar) [57.4 kB] 197s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-s4arrays 1.6.0+dfsg-2 (diff) [5424 B] 197s gpgv: Signature made Sun Jan 12 11:41:49 2025 UTC 197s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 197s gpgv: issuer "crusoe@debian.org" 197s gpgv: Can't check signature: No public key 197s dpkg-source: warning: cannot verify inline signature for ./r-bioc-s4arrays_1.6.0+dfsg-2.dsc: no acceptable signature found 197s autopkgtest [15:19:09]: testing package r-bioc-s4arrays version 1.6.0+dfsg-2 199s autopkgtest [15:19:11]: build not needed 204s autopkgtest [15:19:16]: test pkg-r-autopkgtest: preparing testbed 204s Reading package lists... 204s Building dependency tree... 204s Reading state information... 205s Starting pkgProblemResolver with broken count: 0 205s Starting 2 pkgProblemResolver with broken count: 0 205s Done 206s The following NEW packages will be installed: 206s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 206s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 206s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 206s g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 206s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 206s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 206s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 206s libboost-dev libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libdatrie1 206s libdeflate-dev libdeflate0 libfontconfig1 libgcc-14-dev libgfortran-14-dev 206s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 206s libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 206s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 206s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 206s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 206s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 206s libjs-popper.js libjs-prettify libjs-sifter.js 206s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 206s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 206s libmpfi0 libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 206s libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 206s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 206s libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libsynctex2 libtcl8.6 206s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 206s libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 206s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzzip-0-13t64 206s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 206s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 206s r-bioc-biocgenerics r-bioc-biocparallel r-bioc-biocstyle r-bioc-biocversion 206s r-bioc-delayedarray r-bioc-iranges r-bioc-matrixgenerics r-bioc-s4arrays 206s r-bioc-s4vectors r-bioc-sparsearray r-bioc-xvector r-bioc-zlibbioc 206s r-cran-abind r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bookdown 206s r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli 206s r-cran-codetools r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-desc 206s r-cran-diffobj r-cran-digest r-cran-evaluate r-cran-fastmap 206s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 206s r-cran-futile.options r-cran-glue r-cran-highr r-cran-htmltools 206s r-cran-httpuv r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r 206s r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr 206s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-pkgbuild 206s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx 206s r-cran-promises r-cran-ps r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rlang 206s r-cran-rmarkdown r-cran-rprojroot r-cran-sass r-cran-shiny r-cran-snow 206s r-cran-sourcetools r-cran-testthat r-cran-tinytex r-cran-waldo r-cran-withr 206s r-cran-xfun r-cran-xtable r-cran-yaml t1utils tex-common texlive-base 206s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 206s xdg-utils zip zlib1g-dev 206s 0 upgraded, 228 newly installed, 0 to remove and 0 not upgraded. 206s Need to get 347 MB of archives. 206s After this operation, 1222 MB of additional disk space will be used. 206s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 206s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 206s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB] 208s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B] 208s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 208s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 208s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB] 208s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 208s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB] 208s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB] 208s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB] 208s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB] 208s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB] 208s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB] 208s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB] 208s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB] 209s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB] 209s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 209s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 209s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB] 209s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB] 210s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB] 210s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 210s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 210s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 210s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 210s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 210s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 210s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 210s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 210s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 210s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 210s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 210s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 210s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 210s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 210s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB] 210s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB] 210s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB] 210s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 210s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 210s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 210s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 12 [5216 B] 210s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 210s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] 210s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 210s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 210s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 210s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost1.83-dev arm64 1.83.0-4.1ubuntu2 [10.7 MB] 211s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost-dev arm64 1.83.0.2ubuntu1 [4468 B] 211s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 211s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 211s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 211s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 211s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 211s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 211s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 211s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 211s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 211s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 211s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 211s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 211s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 211s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 211s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 211s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 211s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 211s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 211s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 211s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 211s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 211s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 211s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 211s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 211s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 211s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 211s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 211s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 211s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 211s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 211s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 211s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 211s Get:83 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 211s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 211s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libkpathsea6 arm64 2024.20240313.70630+ds-5build2 [64.3 kB] 211s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 211s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 212s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 212s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 212s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmpfi0 arm64 1.5.4+ds-4 [35.3 kB] 212s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 212s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 212s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 212s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB] 212s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB] 212s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB] 212s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 212s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 212s Get:99 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 212s Get:100 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 212s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 212s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 212s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 212s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 212s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB] 212s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpotrace0 arm64 1.16-2build1 [16.0 kB] 212s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 libptexenc1 arm64 2024.20240313.70630+ds-5build2 [41.7 kB] 212s Get:108 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 212s Get:109 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 212s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 212s Get:111 http://ftpmaster.internal/ubuntu plucky/main arm64 libsynctex2 arm64 2024.20240313.70630+ds-5build2 [60.3 kB] 212s Get:112 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 212s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 213s Get:114 http://ftpmaster.internal/ubuntu plucky/main arm64 libtexlua53-5 arm64 2024.20240313.70630+ds-5build2 [122 kB] 213s Get:115 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 213s Get:116 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 213s Get:117 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 213s Get:118 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 213s Get:119 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 213s Get:120 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 213s Get:121 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 213s Get:122 http://ftpmaster.internal/ubuntu plucky/main arm64 libxmu6 arm64 2:1.1.3-3build2 [47.5 kB] 213s Get:123 http://ftpmaster.internal/ubuntu plucky/main arm64 libxpm4 arm64 1:3.5.17-1build2 [35.1 kB] 213s Get:124 http://ftpmaster.internal/ubuntu plucky/main arm64 libxaw7 arm64 2:1.0.16-1 [184 kB] 213s Get:125 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 213s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.1 [30.8 kB] 213s Get:127 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 213s Get:128 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 213s Get:129 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 213s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 214s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 214s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 214s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 214s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 214s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 214s Get:136 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 214s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 215s Get:138 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB] 215s Get:139 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 215s Get:140 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 215s Get:141 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 215s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B] 215s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 215s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 215s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 215s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 215s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 215s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 215s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 215s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 215s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 215s Get:152 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cpp11 all 0.5.2-1 [233 kB] 215s Get:153 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 215s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 215s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 215s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 215s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB] 215s Get:158 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 215s Get:159 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 215s Get:160 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.51+dfsg-1 [573 kB] 215s Get:161 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 215s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 215s Get:163 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 216s Get:164 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 216s Get:165 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 216s Get:166 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 216s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 216s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 216s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 216s Get:170 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 216s Get:171 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 216s Get:172 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 216s Get:173 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 216s Get:174 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 216s Get:175 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 216s Get:176 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 216s Get:177 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 216s Get:178 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 216s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.56-1 [148 kB] 216s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 216s Get:181 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 216s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 216s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 216s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 216s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 216s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 216s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 216s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 216s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 216s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 216s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB] 216s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 216s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 216s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 216s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 216s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 216s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 tex-common all 6.19 [29.8 kB] 216s Get:198 http://ftpmaster.internal/ubuntu plucky/main arm64 t1utils arm64 1.41-4build3 [61.0 kB] 216s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-binaries arm64 2024.20240313.70630+ds-5build2 [8328 kB] 217s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-base all 2024.20250114-1 [22.5 MB] 218s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-latex-base all 2024.20250114-1 [1264 kB] 218s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-bibtex-extra all 2024.20250114-1 [79.5 MB] 221s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 221s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 222s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 222s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB] 222s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB] 222s Get:208 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 222s Get:209 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 222s Get:210 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-iranges arm64 2.40.1-2 [2303 kB] 222s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 222s Get:212 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 222s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 222s Get:214 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 222s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-sparsearray arm64 1.6.2+dfsg-1 [1369 kB] 222s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 222s Get:217 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 222s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 222s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 222s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 222s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 222s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 222s Get:223 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 222s Get:224 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB] 222s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB] 222s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 222s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-2 [150 kB] 222s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 223s Preconfiguring packages ... 223s Fetched 347 MB in 17s (20.8 MB/s) 223s Selecting previously unselected package libisl23:arm64. 223s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 223s Preparing to unpack .../000-libisl23_0.27-1_arm64.deb ... 223s Unpacking libisl23:arm64 (0.27-1) ... 223s Selecting previously unselected package libmpc3:arm64. 223s Preparing to unpack .../001-libmpc3_1.3.1-1build2_arm64.deb ... 223s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 223s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 224s Preparing to unpack .../002-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 224s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 224s Selecting previously unselected package cpp-14. 224s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_arm64.deb ... 224s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 224s Selecting previously unselected package cpp-aarch64-linux-gnu. 224s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 224s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 224s Selecting previously unselected package cpp. 224s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 224s Unpacking cpp (4:14.2.0-1ubuntu1) ... 224s Selecting previously unselected package libcc1-0:arm64. 224s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_arm64.deb ... 224s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ... 224s Selecting previously unselected package libgomp1:arm64. 224s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_arm64.deb ... 224s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ... 224s Selecting previously unselected package libitm1:arm64. 224s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_arm64.deb ... 224s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ... 224s Selecting previously unselected package libasan8:arm64. 224s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_arm64.deb ... 224s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ... 224s Selecting previously unselected package liblsan0:arm64. 224s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_arm64.deb ... 224s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ... 224s Selecting previously unselected package libtsan2:arm64. 224s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_arm64.deb ... 224s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ... 224s Selecting previously unselected package libubsan1:arm64. 224s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_arm64.deb ... 224s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ... 224s Selecting previously unselected package libhwasan0:arm64. 224s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_arm64.deb ... 224s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ... 224s Selecting previously unselected package libgcc-14-dev:arm64. 224s Preparing to unpack .../014-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ... 224s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 224s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 224s Preparing to unpack .../015-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 224s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 225s Selecting previously unselected package gcc-14. 225s Preparing to unpack .../016-gcc-14_14.2.0-17ubuntu3_arm64.deb ... 225s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 225s Selecting previously unselected package gcc-aarch64-linux-gnu. 225s Preparing to unpack .../017-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 225s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 225s Selecting previously unselected package gcc. 225s Preparing to unpack .../018-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ... 225s Unpacking gcc (4:14.2.0-1ubuntu1) ... 225s Selecting previously unselected package libstdc++-14-dev:arm64. 225s Preparing to unpack .../019-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ... 225s Unpacking libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 225s Selecting previously unselected package g++-14-aarch64-linux-gnu. 225s Preparing to unpack .../020-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 225s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 226s Selecting previously unselected package g++-14. 226s Preparing to unpack .../021-g++-14_14.2.0-17ubuntu3_arm64.deb ... 226s Unpacking g++-14 (14.2.0-17ubuntu3) ... 226s Selecting previously unselected package g++-aarch64-linux-gnu. 226s Preparing to unpack .../022-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 226s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 226s Selecting previously unselected package g++. 226s Preparing to unpack .../023-g++_4%3a14.2.0-1ubuntu1_arm64.deb ... 226s Unpacking g++ (4:14.2.0-1ubuntu1) ... 226s Selecting previously unselected package build-essential. 226s Preparing to unpack .../024-build-essential_12.10ubuntu1_arm64.deb ... 226s Unpacking build-essential (12.10ubuntu1) ... 226s Selecting previously unselected package dctrl-tools. 226s Preparing to unpack .../025-dctrl-tools_2.24-3build3_arm64.deb ... 226s Unpacking dctrl-tools (2.24-3build3) ... 226s Selecting previously unselected package fonts-dejavu-mono. 226s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ... 226s Unpacking fonts-dejavu-mono (2.37-8) ... 226s Selecting previously unselected package fonts-dejavu-core. 226s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ... 226s Unpacking fonts-dejavu-core (2.37-8) ... 226s Selecting previously unselected package fontconfig-config. 226s Preparing to unpack .../028-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ... 226s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 226s Selecting previously unselected package libfontconfig1:arm64. 226s Preparing to unpack .../029-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ... 226s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 226s Selecting previously unselected package fontconfig. 226s Preparing to unpack .../030-fontconfig_2.15.0-2ubuntu1_arm64.deb ... 226s Unpacking fontconfig (2.15.0-2ubuntu1) ... 226s Selecting previously unselected package fonts-font-awesome. 226s Preparing to unpack .../031-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 226s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 226s Selecting previously unselected package fonts-glyphicons-halflings. 226s Preparing to unpack .../032-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 226s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 226s Selecting previously unselected package fonts-lmodern. 226s Preparing to unpack .../033-fonts-lmodern_2.005-1_all.deb ... 226s Unpacking fonts-lmodern (2.005-1) ... 226s Selecting previously unselected package fonts-mathjax. 226s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 226s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 226s Selecting previously unselected package libgfortran5:arm64. 227s Preparing to unpack .../035-libgfortran5_15-20250222-0ubuntu1_arm64.deb ... 227s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ... 227s Selecting previously unselected package libgfortran-14-dev:arm64. 227s Preparing to unpack .../036-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ... 227s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 227s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 227s Preparing to unpack .../037-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 227s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 227s Selecting previously unselected package gfortran-14. 227s Preparing to unpack .../038-gfortran-14_14.2.0-17ubuntu3_arm64.deb ... 227s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 227s Selecting previously unselected package gfortran-aarch64-linux-gnu. 227s Preparing to unpack .../039-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 227s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 227s Selecting previously unselected package gfortran. 227s Preparing to unpack .../040-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ... 227s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 227s Selecting previously unselected package icu-devtools. 227s Preparing to unpack .../041-icu-devtools_76.1-1ubuntu2_arm64.deb ... 227s Unpacking icu-devtools (76.1-1ubuntu2) ... 227s Selecting previously unselected package javascript-common. 227s Preparing to unpack .../042-javascript-common_12_all.deb ... 227s Unpacking javascript-common (12) ... 227s Selecting previously unselected package libio-string-perl. 227s Preparing to unpack .../043-libio-string-perl_1.08-4_all.deb ... 227s Unpacking libio-string-perl (1.08-4) ... 227s Selecting previously unselected package liblatex-tounicode-perl. 227s Preparing to unpack .../044-liblatex-tounicode-perl_0.55-1_all.deb ... 227s Unpacking liblatex-tounicode-perl (0.55-1) ... 227s Selecting previously unselected package libbibtex-parser-perl. 227s Preparing to unpack .../045-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 227s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 227s Selecting previously unselected package libblas3:arm64. 227s Preparing to unpack .../046-libblas3_3.12.1-2_arm64.deb ... 227s Unpacking libblas3:arm64 (3.12.1-2) ... 227s Selecting previously unselected package libblas-dev:arm64. 227s Preparing to unpack .../047-libblas-dev_3.12.1-2_arm64.deb ... 227s Unpacking libblas-dev:arm64 (3.12.1-2) ... 227s Selecting previously unselected package libboost1.83-dev:arm64. 227s Preparing to unpack .../048-libboost1.83-dev_1.83.0-4.1ubuntu2_arm64.deb ... 227s Unpacking libboost1.83-dev:arm64 (1.83.0-4.1ubuntu2) ... 229s Selecting previously unselected package libboost-dev:arm64. 229s Preparing to unpack .../049-libboost-dev_1.83.0.2ubuntu1_arm64.deb ... 229s Unpacking libboost-dev:arm64 (1.83.0.2ubuntu1) ... 229s Selecting previously unselected package libbz2-dev:arm64. 229s Preparing to unpack .../050-libbz2-dev_1.0.8-6_arm64.deb ... 229s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 229s Selecting previously unselected package libpixman-1-0:arm64. 229s Preparing to unpack .../051-libpixman-1-0_0.44.0-3_arm64.deb ... 229s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 229s Selecting previously unselected package libxcb-render0:arm64. 229s Preparing to unpack .../052-libxcb-render0_1.17.0-2_arm64.deb ... 229s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 229s Selecting previously unselected package libxcb-shm0:arm64. 229s Preparing to unpack .../053-libxcb-shm0_1.17.0-2_arm64.deb ... 229s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 229s Selecting previously unselected package libxrender1:arm64. 229s Preparing to unpack .../054-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 229s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 229s Selecting previously unselected package libcairo2:arm64. 229s Preparing to unpack .../055-libcairo2_1.18.2-2_arm64.deb ... 229s Unpacking libcairo2:arm64 (1.18.2-2) ... 230s Selecting previously unselected package libdatrie1:arm64. 230s Preparing to unpack .../056-libdatrie1_0.2.13-3build1_arm64.deb ... 230s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 230s Selecting previously unselected package libdeflate0:arm64. 230s Preparing to unpack .../057-libdeflate0_1.23-1_arm64.deb ... 230s Unpacking libdeflate0:arm64 (1.23-1) ... 230s Selecting previously unselected package libdeflate-dev:arm64. 230s Preparing to unpack .../058-libdeflate-dev_1.23-1_arm64.deb ... 230s Unpacking libdeflate-dev:arm64 (1.23-1) ... 230s Selecting previously unselected package libgraphite2-3:arm64. 230s Preparing to unpack .../059-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 230s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 230s Selecting previously unselected package libharfbuzz0b:arm64. 230s Preparing to unpack .../060-libharfbuzz0b_10.2.0-1_arm64.deb ... 230s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 230s Selecting previously unselected package x11-common. 230s Preparing to unpack .../061-x11-common_1%3a7.7+23ubuntu3_all.deb ... 230s Unpacking x11-common (1:7.7+23ubuntu3) ... 230s Selecting previously unselected package libice6:arm64. 230s Preparing to unpack .../062-libice6_2%3a1.1.1-1_arm64.deb ... 230s Unpacking libice6:arm64 (2:1.1.1-1) ... 230s Selecting previously unselected package libicu-dev:arm64. 230s Preparing to unpack .../063-libicu-dev_76.1-1ubuntu2_arm64.deb ... 230s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 230s Selecting previously unselected package libjpeg-turbo8:arm64. 230s Preparing to unpack .../064-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 230s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 230s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 230s Preparing to unpack .../065-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 230s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 230s Selecting previously unselected package libjpeg8:arm64. 230s Preparing to unpack .../066-libjpeg8_8c-2ubuntu11_arm64.deb ... 230s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 230s Selecting previously unselected package libjpeg8-dev:arm64. 230s Preparing to unpack .../067-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 230s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 230s Selecting previously unselected package libjpeg-dev:arm64. 230s Preparing to unpack .../068-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 230s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 230s Selecting previously unselected package libjs-bootstrap. 230s Preparing to unpack .../069-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 230s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 231s Selecting previously unselected package libjs-popper.js. 231s Preparing to unpack .../070-libjs-popper.js_1.16.1+ds-6_all.deb ... 231s Unpacking libjs-popper.js (1.16.1+ds-6) ... 231s Selecting previously unselected package libjs-bootstrap4. 231s Preparing to unpack .../071-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 231s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 231s Selecting previously unselected package libjs-d3. 231s Preparing to unpack .../072-libjs-d3_3.5.17-4_all.deb ... 231s Unpacking libjs-d3 (3.5.17-4) ... 231s Selecting previously unselected package libjs-es5-shim. 231s Preparing to unpack .../073-libjs-es5-shim_4.6.7-2_all.deb ... 231s Unpacking libjs-es5-shim (4.6.7-2) ... 231s Selecting previously unselected package libjs-highlight.js. 231s Preparing to unpack .../074-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 231s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 231s Selecting previously unselected package libjs-jquery. 231s Preparing to unpack .../075-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 231s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 231s Selecting previously unselected package libjs-jquery-datatables. 231s Preparing to unpack .../076-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 231s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 231s Selecting previously unselected package libjs-sifter.js. 231s Preparing to unpack .../077-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 231s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 231s Selecting previously unselected package libjs-microplugin.js. 231s Preparing to unpack .../078-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 231s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 231s Selecting previously unselected package libjs-jquery-selectize.js. 231s Preparing to unpack .../079-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 231s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 231s Selecting previously unselected package libjs-jquery-ui. 231s Preparing to unpack .../080-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 231s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 231s Selecting previously unselected package libjs-json. 231s Preparing to unpack .../081-libjs-json_0~20221030+~1.0.8-1_all.deb ... 231s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 231s Selecting previously unselected package libjs-lunr. 231s Preparing to unpack .../082-libjs-lunr_2.3.9~dfsg-2_all.deb ... 231s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 231s Selecting previously unselected package libjs-prettify. 231s Preparing to unpack .../083-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 231s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 231s Selecting previously unselected package libkpathsea6:arm64. 231s Preparing to unpack .../084-libkpathsea6_2024.20240313.70630+ds-5build2_arm64.deb ... 231s Unpacking libkpathsea6:arm64 (2024.20240313.70630+ds-5build2) ... 231s Selecting previously unselected package liblapack3:arm64. 231s Preparing to unpack .../085-liblapack3_3.12.1-2_arm64.deb ... 231s Unpacking liblapack3:arm64 (3.12.1-2) ... 231s Selecting previously unselected package liblapack-dev:arm64. 231s Preparing to unpack .../086-liblapack-dev_3.12.1-2_arm64.deb ... 231s Unpacking liblapack-dev:arm64 (3.12.1-2) ... 232s Selecting previously unselected package liblerc4:arm64. 232s Preparing to unpack .../087-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 232s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 232s Selecting previously unselected package liblua5.4-0:arm64. 232s Preparing to unpack .../088-liblua5.4-0_5.4.7-1_arm64.deb ... 232s Unpacking liblua5.4-0:arm64 (5.4.7-1) ... 232s Selecting previously unselected package libmpfi0:arm64. 232s Preparing to unpack .../089-libmpfi0_1.5.4+ds-4_arm64.deb ... 232s Unpacking libmpfi0:arm64 (1.5.4+ds-4) ... 232s Selecting previously unselected package libncurses-dev:arm64. 232s Preparing to unpack .../090-libncurses-dev_6.5+20250216-2_arm64.deb ... 232s Unpacking libncurses-dev:arm64 (6.5+20250216-2) ... 232s Selecting previously unselected package libthai-data. 232s Preparing to unpack .../091-libthai-data_0.1.29-2build1_all.deb ... 232s Unpacking libthai-data (0.1.29-2build1) ... 232s Selecting previously unselected package libthai0:arm64. 232s Preparing to unpack .../092-libthai0_0.1.29-2build1_arm64.deb ... 232s Unpacking libthai0:arm64 (0.1.29-2build1) ... 232s Selecting previously unselected package libpango-1.0-0:arm64. 232s Preparing to unpack .../093-libpango-1.0-0_1.56.2-1_arm64.deb ... 232s Unpacking libpango-1.0-0:arm64 (1.56.2-1) ... 232s Selecting previously unselected package libpangoft2-1.0-0:arm64. 232s Preparing to unpack .../094-libpangoft2-1.0-0_1.56.2-1_arm64.deb ... 232s Unpacking libpangoft2-1.0-0:arm64 (1.56.2-1) ... 232s Selecting previously unselected package libpangocairo-1.0-0:arm64. 232s Preparing to unpack .../095-libpangocairo-1.0-0_1.56.2-1_arm64.deb ... 232s Unpacking libpangocairo-1.0-0:arm64 (1.56.2-1) ... 232s Selecting previously unselected package libpaper2:arm64. 232s Preparing to unpack .../096-libpaper2_2.2.5-0.3_arm64.deb ... 232s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 232s Selecting previously unselected package libpaper-utils. 232s Preparing to unpack .../097-libpaper-utils_2.2.5-0.3_arm64.deb ... 232s Unpacking libpaper-utils (2.2.5-0.3) ... 232s Selecting previously unselected package libpcre2-16-0:arm64. 232s Preparing to unpack .../098-libpcre2-16-0_10.45-1_arm64.deb ... 232s Unpacking libpcre2-16-0:arm64 (10.45-1) ... 232s Selecting previously unselected package libpcre2-32-0:arm64. 232s Preparing to unpack .../099-libpcre2-32-0_10.45-1_arm64.deb ... 232s Unpacking libpcre2-32-0:arm64 (10.45-1) ... 232s Selecting previously unselected package libpcre2-posix3:arm64. 232s Preparing to unpack .../100-libpcre2-posix3_10.45-1_arm64.deb ... 232s Unpacking libpcre2-posix3:arm64 (10.45-1) ... 232s Selecting previously unselected package libpcre2-dev:arm64. 232s Preparing to unpack .../101-libpcre2-dev_10.45-1_arm64.deb ... 232s Unpacking libpcre2-dev:arm64 (10.45-1) ... 232s Selecting previously unselected package libpkgconf3:arm64. 232s Preparing to unpack .../102-libpkgconf3_1.8.1-4_arm64.deb ... 232s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 232s Selecting previously unselected package zlib1g-dev:arm64. 232s Preparing to unpack .../103-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 232s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 232s Selecting previously unselected package libpng-dev:arm64. 232s Preparing to unpack .../104-libpng-dev_1.6.47-1_arm64.deb ... 232s Unpacking libpng-dev:arm64 (1.6.47-1) ... 233s Selecting previously unselected package libpotrace0:arm64. 233s Preparing to unpack .../105-libpotrace0_1.16-2build1_arm64.deb ... 233s Unpacking libpotrace0:arm64 (1.16-2build1) ... 233s Selecting previously unselected package libptexenc1:arm64. 233s Preparing to unpack .../106-libptexenc1_2024.20240313.70630+ds-5build2_arm64.deb ... 233s Unpacking libptexenc1:arm64 (2024.20240313.70630+ds-5build2) ... 233s Selecting previously unselected package libreadline-dev:arm64. 233s Preparing to unpack .../107-libreadline-dev_8.2-6_arm64.deb ... 233s Unpacking libreadline-dev:arm64 (8.2-6) ... 233s Selecting previously unselected package libsharpyuv0:arm64. 233s Preparing to unpack .../108-libsharpyuv0_1.5.0-0.1_arm64.deb ... 233s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 233s Selecting previously unselected package libsm6:arm64. 233s Preparing to unpack .../109-libsm6_2%3a1.2.4-1_arm64.deb ... 233s Unpacking libsm6:arm64 (2:1.2.4-1) ... 233s Selecting previously unselected package libsynctex2:arm64. 233s Preparing to unpack .../110-libsynctex2_2024.20240313.70630+ds-5build2_arm64.deb ... 233s Unpacking libsynctex2:arm64 (2024.20240313.70630+ds-5build2) ... 233s Selecting previously unselected package libtcl8.6:arm64. 233s Preparing to unpack .../111-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 233s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 233s Selecting previously unselected package libteckit0:arm64. 233s Preparing to unpack .../112-libteckit0_2.5.12+ds1-1_arm64.deb ... 233s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 233s Selecting previously unselected package libtexlua53-5:arm64. 233s Preparing to unpack .../113-libtexlua53-5_2024.20240313.70630+ds-5build2_arm64.deb ... 233s Unpacking libtexlua53-5:arm64 (2024.20240313.70630+ds-5build2) ... 233s Selecting previously unselected package libjbig0:arm64. 233s Preparing to unpack .../114-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 233s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 233s Selecting previously unselected package libwebp7:arm64. 233s Preparing to unpack .../115-libwebp7_1.5.0-0.1_arm64.deb ... 233s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 233s Selecting previously unselected package libtiff6:arm64. 233s Preparing to unpack .../116-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 233s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 233s Selecting previously unselected package libxft2:arm64. 233s Preparing to unpack .../117-libxft2_2.3.6-1build1_arm64.deb ... 233s Unpacking libxft2:arm64 (2.3.6-1build1) ... 233s Selecting previously unselected package libxss1:arm64. 233s Preparing to unpack .../118-libxss1_1%3a1.2.3-1build3_arm64.deb ... 233s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 233s Selecting previously unselected package libtk8.6:arm64. 233s Preparing to unpack .../119-libtk8.6_8.6.16-1_arm64.deb ... 233s Unpacking libtk8.6:arm64 (8.6.16-1) ... 233s Selecting previously unselected package libxt6t64:arm64. 233s Preparing to unpack .../120-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 233s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 233s Selecting previously unselected package libxmu6:arm64. 233s Preparing to unpack .../121-libxmu6_2%3a1.1.3-3build2_arm64.deb ... 233s Unpacking libxmu6:arm64 (2:1.1.3-3build2) ... 233s Selecting previously unselected package libxpm4:arm64. 233s Preparing to unpack .../122-libxpm4_1%3a3.5.17-1build2_arm64.deb ... 233s Unpacking libxpm4:arm64 (1:3.5.17-1build2) ... 233s Selecting previously unselected package libxaw7:arm64. 233s Preparing to unpack .../123-libxaw7_2%3a1.0.16-1_arm64.deb ... 233s Unpacking libxaw7:arm64 (2:1.0.16-1) ... 233s Selecting previously unselected package libxi6:arm64. 233s Preparing to unpack .../124-libxi6_2%3a1.8.2-1_arm64.deb ... 233s Unpacking libxi6:arm64 (2:1.8.2-1) ... 233s Selecting previously unselected package libzzip-0-13t64:arm64. 233s Preparing to unpack .../125-libzzip-0-13t64_0.13.78+dfsg.1-0.1_arm64.deb ... 233s Unpacking libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.1) ... 234s Selecting previously unselected package zip. 234s Preparing to unpack .../126-zip_3.0-14ubuntu2_arm64.deb ... 234s Unpacking zip (3.0-14ubuntu2) ... 234s Selecting previously unselected package unzip. 234s Preparing to unpack .../127-unzip_6.0-28ubuntu6_arm64.deb ... 234s Unpacking unzip (6.0-28ubuntu6) ... 234s Selecting previously unselected package xdg-utils. 234s Preparing to unpack .../128-xdg-utils_1.2.1-2ubuntu1_all.deb ... 234s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 234s Selecting previously unselected package r-base-core. 234s Preparing to unpack .../129-r-base-core_4.4.3-1_arm64.deb ... 234s Unpacking r-base-core (4.4.3-1) ... 234s Selecting previously unselected package r-cran-littler. 234s Preparing to unpack .../130-r-cran-littler_0.3.20-2_arm64.deb ... 234s Unpacking r-cran-littler (0.3.20-2) ... 234s Selecting previously unselected package littler. 234s Preparing to unpack .../131-littler_0.3.20-2_all.deb ... 234s Unpacking littler (0.3.20-2) ... 234s Selecting previously unselected package node-bootstrap-sass. 234s Preparing to unpack .../132-node-bootstrap-sass_3.4.3-2_all.deb ... 234s Unpacking node-bootstrap-sass (3.4.3-2) ... 234s Selecting previously unselected package node-html5shiv. 234s Preparing to unpack .../133-node-html5shiv_3.7.3+dfsg-5_all.deb ... 234s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 234s Selecting previously unselected package node-normalize.css. 234s Preparing to unpack .../134-node-normalize.css_8.0.1-5_all.deb ... 234s Unpacking node-normalize.css (8.0.1-5) ... 234s Selecting previously unselected package pandoc-data. 234s Preparing to unpack .../135-pandoc-data_3.1.11.1-3build1_all.deb ... 234s Unpacking pandoc-data (3.1.11.1-3build1) ... 234s Selecting previously unselected package pandoc. 234s Preparing to unpack .../136-pandoc_3.1.11.1+ds-2_arm64.deb ... 234s Unpacking pandoc (3.1.11.1+ds-2) ... 235s Selecting previously unselected package liblzma-dev:arm64. 235s Preparing to unpack .../137-liblzma-dev_5.6.4-1_arm64.deb ... 235s Unpacking liblzma-dev:arm64 (5.6.4-1) ... 235s Selecting previously unselected package pkgconf-bin. 235s Preparing to unpack .../138-pkgconf-bin_1.8.1-4_arm64.deb ... 235s Unpacking pkgconf-bin (1.8.1-4) ... 235s Selecting previously unselected package pkgconf:arm64. 236s Preparing to unpack .../139-pkgconf_1.8.1-4_arm64.deb ... 236s Unpacking pkgconf:arm64 (1.8.1-4) ... 236s Selecting previously unselected package libtirpc-dev:arm64. 236s Preparing to unpack .../140-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 236s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 236s Selecting previously unselected package r-base-dev. 236s Preparing to unpack .../141-r-base-dev_4.4.3-1_all.deb ... 236s Unpacking r-base-dev (4.4.3-1) ... 236s Selecting previously unselected package pkg-r-autopkgtest. 236s Preparing to unpack .../142-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 236s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 236s Selecting previously unselected package r-bioc-biocgenerics. 236s Preparing to unpack .../143-r-bioc-biocgenerics_0.52.0-2_all.deb ... 236s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 236s Selecting previously unselected package r-cran-formatr. 236s Preparing to unpack .../144-r-cran-formatr_1.14-2_all.deb ... 236s Unpacking r-cran-formatr (1.14-2) ... 236s Selecting previously unselected package r-cran-lambda.r. 236s Preparing to unpack .../145-r-cran-lambda.r_1.2.4-2build1_all.deb ... 236s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 236s Selecting previously unselected package r-cran-futile.options. 236s Preparing to unpack .../146-r-cran-futile.options_1.0.1-3build1_all.deb ... 236s Unpacking r-cran-futile.options (1.0.1-3build1) ... 236s Selecting previously unselected package r-cran-futile.logger. 236s Preparing to unpack .../147-r-cran-futile.logger_1.4.3-4build1_all.deb ... 236s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 236s Selecting previously unselected package r-cran-snow. 236s Preparing to unpack .../148-r-cran-snow_1%3a0.4.4-2_all.deb ... 236s Unpacking r-cran-snow (1:0.4.4-2) ... 236s Selecting previously unselected package r-cran-codetools. 236s Preparing to unpack .../149-r-cran-codetools_0.2-20-1_all.deb ... 236s Unpacking r-cran-codetools (0.2-20-1) ... 236s Selecting previously unselected package r-cran-bh. 236s Preparing to unpack .../150-r-cran-bh_1.84.0-1_all.deb ... 236s Unpacking r-cran-bh (1.84.0-1) ... 236s Selecting previously unselected package r-cran-cpp11. 236s Preparing to unpack .../151-r-cran-cpp11_0.5.2-1_all.deb ... 236s Unpacking r-cran-cpp11 (0.5.2-1) ... 236s Selecting previously unselected package r-bioc-biocparallel. 236s Preparing to unpack .../152-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 236s Unpacking r-bioc-biocparallel (1.40.0-2) ... 236s Selecting previously unselected package r-cran-base64enc. 236s Preparing to unpack .../153-r-cran-base64enc_0.1-3-3_arm64.deb ... 236s Unpacking r-cran-base64enc (0.1-3-3) ... 236s Selecting previously unselected package r-cran-digest. 236s Preparing to unpack .../154-r-cran-digest_0.6.37-1_arm64.deb ... 236s Unpacking r-cran-digest (0.6.37-1) ... 236s Selecting previously unselected package r-cran-fastmap. 236s Preparing to unpack .../155-r-cran-fastmap_1.2.0-1_arm64.deb ... 236s Unpacking r-cran-fastmap (1.2.0-1) ... 236s Selecting previously unselected package r-cran-rlang. 236s Preparing to unpack .../156-r-cran-rlang_1.1.5-1_arm64.deb ... 236s Unpacking r-cran-rlang (1.1.5-1) ... 236s Selecting previously unselected package r-cran-htmltools. 236s Preparing to unpack .../157-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 236s Unpacking r-cran-htmltools (0.5.8.1-1) ... 236s Selecting previously unselected package r-cran-evaluate. 237s Preparing to unpack .../158-r-cran-evaluate_1.0.3-1_all.deb ... 237s Unpacking r-cran-evaluate (1.0.3-1) ... 237s Selecting previously unselected package r-cran-xfun. 237s Preparing to unpack .../159-r-cran-xfun_0.51+dfsg-1_arm64.deb ... 237s Unpacking r-cran-xfun (0.51+dfsg-1) ... 237s Selecting previously unselected package r-cran-highr. 237s Preparing to unpack .../160-r-cran-highr_0.11+dfsg-1_all.deb ... 237s Unpacking r-cran-highr (0.11+dfsg-1) ... 237s Selecting previously unselected package r-cran-yaml. 237s Preparing to unpack .../161-r-cran-yaml_2.3.10-1_arm64.deb ... 237s Unpacking r-cran-yaml (2.3.10-1) ... 237s Selecting previously unselected package libjs-mathjax. 237s Preparing to unpack .../162-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 237s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 237s Selecting previously unselected package r-cran-knitr. 237s Preparing to unpack .../163-r-cran-knitr_1.49+dfsg-1_all.deb ... 237s Unpacking r-cran-knitr (1.49+dfsg-1) ... 237s Selecting previously unselected package r-cran-cachem. 237s Preparing to unpack .../164-r-cran-cachem_1.1.0-1_arm64.deb ... 237s Unpacking r-cran-cachem (1.1.0-1) ... 237s Selecting previously unselected package r-cran-jquerylib. 237s Preparing to unpack .../165-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 237s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 238s Selecting previously unselected package r-cran-jsonlite. 238s Preparing to unpack .../166-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 238s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 238s Selecting previously unselected package r-cran-cli. 238s Preparing to unpack .../167-r-cran-cli_3.6.4-1_arm64.deb ... 238s Unpacking r-cran-cli (3.6.4-1) ... 238s Selecting previously unselected package r-cran-glue. 238s Preparing to unpack .../168-r-cran-glue_1.8.0-1_arm64.deb ... 238s Unpacking r-cran-glue (1.8.0-1) ... 238s Selecting previously unselected package r-cran-lifecycle. 238s Preparing to unpack .../169-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 238s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 238s Selecting previously unselected package r-cran-memoise. 238s Preparing to unpack .../170-r-cran-memoise_2.0.1-1_all.deb ... 238s Unpacking r-cran-memoise (2.0.1-1) ... 238s Selecting previously unselected package r-cran-mime. 238s Preparing to unpack .../171-r-cran-mime_0.12-2_arm64.deb ... 238s Unpacking r-cran-mime (0.12-2) ... 238s Selecting previously unselected package r-cran-fs. 238s Preparing to unpack .../172-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 238s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 238s Selecting previously unselected package r-cran-r6. 238s Preparing to unpack .../173-r-cran-r6_2.6.1-1_all.deb ... 238s Unpacking r-cran-r6 (2.6.1-1) ... 238s Selecting previously unselected package r-cran-rappdirs. 238s Preparing to unpack .../174-r-cran-rappdirs_0.3.3-1_arm64.deb ... 238s Unpacking r-cran-rappdirs (0.3.3-1) ... 238s Selecting previously unselected package r-cran-sass. 238s Preparing to unpack .../175-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 238s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 238s Selecting previously unselected package r-cran-bslib. 238s Preparing to unpack .../176-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 238s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 238s Selecting previously unselected package r-cran-fontawesome. 238s Preparing to unpack .../177-r-cran-fontawesome_0.5.3-1_all.deb ... 238s Unpacking r-cran-fontawesome (0.5.3-1) ... 238s Selecting previously unselected package r-cran-tinytex. 238s Preparing to unpack .../178-r-cran-tinytex_0.56-1_all.deb ... 238s Unpacking r-cran-tinytex (0.56-1) ... 238s Selecting previously unselected package libjs-modernizr. 238s Preparing to unpack .../179-libjs-modernizr_3.13.0-0.1_all.deb ... 238s Unpacking libjs-modernizr (3.13.0-0.1) ... 238s Selecting previously unselected package r-cran-pkgkitten. 238s Preparing to unpack .../180-r-cran-pkgkitten_0.2.4-1_all.deb ... 238s Unpacking r-cran-pkgkitten (0.2.4-1) ... 238s Selecting previously unselected package r-cran-rcpp. 238s Preparing to unpack .../181-r-cran-rcpp_1.0.14-1_arm64.deb ... 238s Unpacking r-cran-rcpp (1.0.14-1) ... 239s Selecting previously unselected package r-cran-later. 239s Preparing to unpack .../182-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 239s Unpacking r-cran-later (1.4.1+dfsg-1) ... 239s Selecting previously unselected package r-cran-magrittr. 239s Preparing to unpack .../183-r-cran-magrittr_2.0.3-1_arm64.deb ... 239s Unpacking r-cran-magrittr (2.0.3-1) ... 239s Selecting previously unselected package r-cran-promises. 239s Preparing to unpack .../184-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 239s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 239s Selecting previously unselected package r-cran-httpuv. 239s Preparing to unpack .../185-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 239s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 239s Selecting previously unselected package r-cran-xtable. 239s Preparing to unpack .../186-r-cran-xtable_1%3a1.8-4-2_all.deb ... 239s Unpacking r-cran-xtable (1:1.8-4-2) ... 239s Selecting previously unselected package r-cran-sourcetools. 239s Preparing to unpack .../187-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 239s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 239s Selecting previously unselected package r-cran-crayon. 239s Preparing to unpack .../188-r-cran-crayon_1.5.3-1_all.deb ... 239s Unpacking r-cran-crayon (1.5.3-1) ... 239s Selecting previously unselected package r-cran-withr. 239s Preparing to unpack .../189-r-cran-withr_3.0.2+dfsg-1_all.deb ... 239s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 239s Selecting previously unselected package r-cran-commonmark. 239s Preparing to unpack .../190-r-cran-commonmark_1.9.2-2_arm64.deb ... 239s Unpacking r-cran-commonmark (1.9.2-2) ... 239s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 239s Preparing to unpack .../191-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 239s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 239s Selecting previously unselected package r-cran-shiny. 239s Preparing to unpack .../192-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 239s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 239s Selecting previously unselected package r-cran-rmarkdown. 239s Preparing to unpack .../193-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 239s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 239s Selecting previously unselected package r-cran-bookdown. 239s Preparing to unpack .../194-r-cran-bookdown_0.42+dfsg-1_all.deb ... 239s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 239s Selecting previously unselected package r-cran-biocmanager. 239s Preparing to unpack .../195-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 239s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 239s Selecting previously unselected package tex-common. 239s Preparing to unpack .../196-tex-common_6.19_all.deb ... 239s Unpacking tex-common (6.19) ... 240s Selecting previously unselected package t1utils. 240s Preparing to unpack .../197-t1utils_1.41-4build3_arm64.deb ... 240s Unpacking t1utils (1.41-4build3) ... 240s Selecting previously unselected package texlive-binaries. 240s Preparing to unpack .../198-texlive-binaries_2024.20240313.70630+ds-5build2_arm64.deb ... 240s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ... 240s Selecting previously unselected package texlive-base. 240s Preparing to unpack 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.../204-r-cran-lattice_0.22-6-1_arm64.deb ... 244s Unpacking r-cran-lattice (0.22-6-1) ... 244s Selecting previously unselected package r-cran-matrix. 244s Preparing to unpack .../205-r-cran-matrix_1.7-3-1_arm64.deb ... 244s Unpacking r-cran-matrix (1.7-3-1) ... 244s Selecting previously unselected package r-cran-matrixstats. 244s Preparing to unpack .../206-r-cran-matrixstats_1.5.0-1_arm64.deb ... 244s Unpacking r-cran-matrixstats (1.5.0-1) ... 244s Selecting previously unselected package r-bioc-matrixgenerics. 244s Preparing to unpack .../207-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 244s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 244s Selecting previously unselected package r-bioc-s4vectors. 244s Preparing to unpack .../208-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 244s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 244s Selecting previously unselected package r-bioc-iranges. 244s Preparing to unpack .../209-r-bioc-iranges_2.40.1-2_arm64.deb ... 244s Unpacking r-bioc-iranges (2.40.1-2) ... 244s Selecting previously unselected package r-cran-abind. 244s Preparing to unpack .../210-r-cran-abind_1.4-8-1_all.deb ... 244s Unpacking r-cran-abind (1.4-8-1) ... 244s Selecting previously unselected package r-bioc-s4arrays. 244s Preparing to unpack .../211-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 244s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 244s Selecting previously unselected package r-bioc-zlibbioc. 244s Preparing to unpack .../212-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 244s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 244s Selecting previously unselected package r-bioc-xvector. 244s Preparing to unpack .../213-r-bioc-xvector_0.46.0-2_arm64.deb ... 244s Unpacking r-bioc-xvector (0.46.0-2) ... 244s Selecting previously unselected package r-bioc-sparsearray. 245s Preparing to unpack .../214-r-bioc-sparsearray_1.6.2+dfsg-1_arm64.deb ... 245s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 245s Selecting previously unselected package r-bioc-delayedarray. 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mode 251s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 251s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 251s Setting up texlive-bibtex-extra (2024.20250114-1) ... 251s Setting up r-cran-memoise (2.0.1-1) ... 251s Setting up r-cran-promises (1.3.2+dfsg-1) ... 251s Setting up r-bioc-xvector (0.46.0-2) ... 251s Setting up r-cran-pkgbuild (1.4.6-1) ... 251s Setting up r-cran-pkgload (1.4.0-1) ... 251s Setting up r-base-dev (4.4.3-1) ... 251s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 251s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 251s Setting up r-cran-testthat (3.2.3-1) ... 251s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 251s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 251s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 251s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 251s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 251s Setting up r-cran-bookdown (0.42+dfsg-1) ... 251s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 251s Processing triggers for libc-bin (2.41-1ubuntu2) ... 251s Processing triggers for man-db (2.13.0-1) ... 253s Processing triggers for install-info (7.1.1-1) ... 253s Processing triggers for tex-common (6.19) ... 253s Running updmap-sys. This may take some time... done. 254s Running mktexlsr /var/lib/texmf ... done. 254s Building format(s) --all. 291s This may take some time... done. 292s autopkgtest [15:20:44]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 292s autopkgtest [15:20:44]: test pkg-r-autopkgtest: [----------------------- 292s Test: Try to load the R library S4Arrays 293s 293s R version 4.4.3 (2025-02-28) -- "Trophy Case" 293s Copyright (C) 2025 The R Foundation for Statistical Computing 293s Platform: aarch64-unknown-linux-gnu 293s 293s R is free software and comes with ABSOLUTELY NO WARRANTY. 293s You are welcome to redistribute it under certain conditions. 293s Type 'license()' or 'licence()' for distribution details. 293s 293s R is a collaborative project with many contributors. 293s Type 'contributors()' for more information and 293s 'citation()' on how to cite R or R packages in publications. 293s 293s Type 'demo()' for some demos, 'help()' for on-line help, or 293s 'help.start()' for an HTML browser interface to help. 293s Type 'q()' to quit R. 293s 293s > library('S4Arrays') 293s Loading required package: Matrix 294s Loading required package: abind 294s Loading required package: BiocGenerics 294s 294s Attaching package: ‘BiocGenerics’ 294s 294s The following objects are masked from ‘package:stats’: 294s 294s IQR, mad, sd, var, xtabs 294s 294s The following objects are masked from ‘package:base’: 294s 294s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 294s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 294s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 294s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 294s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 294s table, tapply, union, unique, unsplit, which.max, which.min 294s 294s Loading required package: S4Vectors 294s Loading required package: stats4 294s 294s Attaching package: ‘S4Vectors’ 294s 294s The following objects are masked from ‘package:Matrix’: 294s 294s expand, unname 294s 294s The following object is masked from ‘package:utils’: 294s 294s findMatches 294s 294s The following objects are masked from ‘package:base’: 294s 294s expand.grid, I, unname 294s 294s Loading required package: IRanges 295s 295s Attaching package: ‘S4Arrays’ 295s 295s The following object is masked from ‘package:abind’: 295s 295s abind 295s 295s The following object is masked from ‘package:base’: 295s 295s rowsum 295s 295s > 295s > 295s Other tests are currently unsupported! 295s They will be progressively added. 296s autopkgtest [15:20:48]: test pkg-r-autopkgtest: -----------------------] 296s autopkgtest [15:20:48]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 296s pkg-r-autopkgtest PASS 296s autopkgtest [15:20:48]: @@@@@@@@@@@@@@@@@@@@ summary 296s pkg-r-autopkgtest PASS 316s nova [W] Using flock in prodstack6-arm64 316s Creating nova instance adt-plucky-arm64-r-bioc-s4arrays-20250315-151552-juju-7f2275-prod-proposed-migration-environment-2-57d5923d-b5a7-430a-b050-990b8651e488 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 316s nova [W] Timed out waiting for 94f81417-0944-4e5a-aea7-3853ef5f8e7f to get deleted.