0s autopkgtest [15:38:14]: starting date and time: 2025-03-15 15:38:14+0000 0s autopkgtest [15:38:14]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:38:14]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.4kh9j2u_/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-deseq2 --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-37.secgroup --name adt-plucky-arm64-r-bioc-deseq2-20250315-150535-juju-7f2275-prod-proposed-migration-environment-20-4fc86fa0-b5ca-41d5-b9ef-51225c20e640 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 132s autopkgtest [15:40:26]: testbed dpkg architecture: arm64 132s autopkgtest [15:40:26]: testbed apt version: 2.9.33 133s autopkgtest [15:40:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup 133s autopkgtest [15:40:27]: testbed release detected to be: None 134s autopkgtest [15:40:28]: updating testbed package index (apt update) 135s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 135s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 135s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 135s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 135s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 135s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 136s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 136s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [111 kB] 136s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1856 B] 136s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 136s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [324 kB] 136s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [14.7 kB] 136s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 136s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [268 B] 137s Fetched 1078 kB in 2s (592 kB/s) 138s Reading package lists... 139s Reading package lists... 139s Building dependency tree... 139s Reading state information... 139s Calculating upgrade... 140s Calculating upgrade... 140s The following packages will be upgraded: 140s pinentry-curses python3-jinja2 strace 140s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 140s Need to get 647 kB of archives. 140s After this operation, 11.3 kB of additional disk space will be used. 140s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 141s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pinentry-curses arm64 1.3.1-2ubuntu3 [39.2 kB] 141s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 142s Fetched 647 kB in 1s (572 kB/s) 142s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 142s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 142s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 142s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_arm64.deb ... 142s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 142s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 142s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 143s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 143s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 143s Setting up strace (6.13+ds-1ubuntu1) ... 143s Processing triggers for man-db (2.13.0-1) ... 144s Reading package lists... 145s Building dependency tree... 145s Reading state information... 146s Solving dependencies... 147s The following packages will be REMOVED: 147s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 147s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 147s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 147s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 148s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 148s After this operation, 267 MB disk space will be freed. 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 148s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 148s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 148s Removing libpython3.12t64:arm64 (3.12.9-1) ... 148s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 148s Removing libnsl2:arm64 (1.3.0-3build3) ... 148s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 148s Removing libunwind8:arm64 (1.6.2-3.1) ... 148s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 149s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 151s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 151s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 151s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 151s /etc/kernel/postrm.d/initramfs-tools: 151s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 151s /etc/kernel/postrm.d/zz-flash-kernel: 151s flash-kernel: Kernel 6.11.0-8-generic has been removed. 151s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 151s /etc/kernel/postrm.d/zz-update-grub: 151s Sourcing file `/etc/default/grub' 151s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 151s Generating grub configuration file ... 151s Found linux image: /boot/vmlinuz-6.14.0-10-generic 152s Found initrd image: /boot/initrd.img-6.14.0-10-generic 152s Warning: os-prober will not be executed to detect other bootable partitions. 152s Systems on them will not be added to the GRUB boot configuration. 152s Check GRUB_DISABLE_OS_PROBER documentation entry. 152s Adding boot menu entry for UEFI Firmware Settings ... 152s done 152s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 152s Processing triggers for libc-bin (2.41-1ubuntu1) ... 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 152s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 152s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 152s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 153s autopkgtest [15:40:47]: upgrading testbed (apt dist-upgrade and autopurge) 153s Reading package lists... 153s Building dependency tree... 153s Reading state information... 154s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 154s Starting 2 pkgProblemResolver with broken count: 0 154s Done 155s Entering ResolveByKeep 155s 156s Calculating upgrade... 156s The following packages will be upgraded: 156s libc-bin libc-dev-bin libc6 libc6-dev locales 156s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 156s Need to get 9530 kB of archives. 156s After this operation, 0 B of additional disk space will be used. 156s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 159s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 159s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 162s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 162s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 167s Preconfiguring packages ... 167s Fetched 9530 kB in 11s (879 kB/s) 167s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 167s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 167s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 168s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 168s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 168s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 168s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 168s Setting up libc6:arm64 (2.41-1ubuntu2) ... 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 168s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 168s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 168s Setting up libc-bin (2.41-1ubuntu2) ... 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 168s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 168s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 169s Setting up locales (2.41-1ubuntu2) ... 169s Generating locales (this might take a while)... 171s en_US.UTF-8... done 171s Generation complete. 171s Setting up libc-dev-bin (2.41-1ubuntu2) ... 171s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 171s Processing triggers for man-db (2.13.0-1) ... 172s Processing triggers for systemd (257.3-1ubuntu3) ... 173s Reading package lists... 173s Building dependency tree... 173s Reading state information... 174s Starting pkgProblemResolver with broken count: 0 174s Starting 2 pkgProblemResolver with broken count: 0 174s Done 174s Solving dependencies... 175s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 175s autopkgtest [15:41:09]: rebooting testbed after setup commands that affected boot 200s autopkgtest [15:41:34]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 203s autopkgtest [15:41:37]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-deseq2 206s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-deseq2 1.46.0+dfsg-2 (dsc) [2408 B] 206s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-deseq2 1.46.0+dfsg-2 (tar) [597 kB] 206s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-deseq2 1.46.0+dfsg-2 (diff) [5208 B] 206s gpgv: Signature made Mon Jan 13 07:59:02 2025 UTC 206s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 206s gpgv: issuer "crusoe@debian.org" 206s gpgv: Can't check signature: No public key 206s dpkg-source: warning: cannot verify inline signature for ./r-bioc-deseq2_1.46.0+dfsg-2.dsc: no acceptable signature found 206s autopkgtest [15:41:40]: testing package r-bioc-deseq2 version 1.46.0+dfsg-2 209s autopkgtest [15:41:43]: build not needed 213s autopkgtest [15:41:47]: test pkg-r-autopkgtest: preparing testbed 213s Reading package lists... 214s Building dependency tree... 214s Reading state information... 214s Starting pkgProblemResolver with broken count: 0 214s Starting 2 pkgProblemResolver with broken count: 0 214s Done 215s The following NEW packages will be installed: 215s build-essential comerr-dev cpp cpp-14 cpp-14-aarch64-linux-gnu 215s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 215s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 215s fonts-glyphicons-halflings fonts-mathjax g++ g++-14 g++-14-aarch64-linux-gnu 215s g++-aarch64-linux-gnu gcc gcc-14 gcc-14-aarch64-linux-gnu 215s gcc-aarch64-linux-gnu gfortran gfortran-14 gfortran-14-aarch64-linux-gnu 215s gfortran-aarch64-linux-gnu hdf5-helpers icu-devtools javascript-common 215s krb5-multidev libaec-dev libaec0 libasan8 libblas-dev libblas3 libblosc1 215s libboost-dev libboost1.83-dev libbrotli-dev libbz2-dev libcairo2 libcc1-0 215s libcurl4-openssl-dev libdatrie1 libdeflate-dev libdeflate0 libevent-2.1-7t64 215s libfontconfig1 libgcc-14-dev libgfortran-14-dev libgfortran5 libgmp-dev 215s libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 libgnutls28-dev 215s libgomp1 libgraphite2-3 libgssrpc4t64 libharfbuzz0b libhdf5-310 215s libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310 215s libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libhnswlib-dev libhwasan0 libice6 215s libicu-dev libidn2-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 215s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 215s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 215s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 215s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 215s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 215s libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkrb5-dev liblapack-dev 215s liblapack3 libldap-dev liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 215s libncurses-dev libnghttp2-dev libp11-kit-dev libpango-1.0-0 215s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 215s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 215s libpng-dev libpsl-dev libreadline-dev librtmp-dev libsharpyuv0 libsm6 215s libsnappy1v5 libssh2-1-dev libssl-dev libstdc++-14-dev libsz2 libtasn1-6-dev 215s libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 215s libubsan1 libunbound8 libwebp7 libxcb-render0 libxcb-shm0 libxft2 215s libxrender1 libxss1 libxt6t64 libzstd-dev littler nettle-dev 215s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 215s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 215s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-annotationhub 215s r-bioc-assorthead r-bioc-beachmat r-bioc-biobase r-bioc-biocfilecache 215s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biocversion 215s r-bioc-biomart r-bioc-biostrings r-bioc-delayedarray 215s r-bioc-delayedmatrixstats r-bioc-deseq2 r-bioc-ensembldb r-bioc-genomeinfodb 215s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 215s r-bioc-genomicranges r-bioc-glmgampoi r-bioc-hdf5array r-bioc-iranges 215s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-protgenerics r-bioc-rhdf5 215s r-bioc-rhdf5filters r-bioc-rhdf5lib r-bioc-rhtslib r-bioc-rsamtools 215s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 215s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-sparsematrixstats 215s r-bioc-summarizedexperiment r-bioc-txdbmaker r-bioc-tximeta r-bioc-tximport 215s r-bioc-tximportdata r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 215s r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager 215s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-brio r-cran-bslib 215s r-cran-cachem r-cran-callr r-cran-cli r-cran-clipr r-cran-codetools 215s r-cran-colorspace r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl 215s r-cran-dbi r-cran-dbplyr r-cran-desc r-cran-diffobj r-cran-digest 215s r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap 215s r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 215s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-ggplot2 215s r-cran-glue r-cran-gtable r-cran-highr r-cran-hms r-cran-htmltools 215s r-cran-httpuv r-cran-httr r-cran-httr2 r-cran-isoband r-cran-jquerylib 215s r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 215s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-locfit 215s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise 215s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-openssl 215s r-cran-pbapply r-cran-pheatmap r-cran-pillar r-cran-pkgbuild 215s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png 215s r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 215s r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-rappdirs 215s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo r-cran-rcurl 215s r-cran-readr r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 215s r-cran-rprojroot r-cran-rsqlite r-cran-sass r-cran-scales r-cran-shiny 215s r-cran-snow r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-sys 215s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 215s r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-vroom 215s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable 215s r-cran-yaml unzip x11-common xdg-utils zip zlib1g-dev 215s 0 upgraded, 339 newly installed, 0 to remove and 0 not upgraded. 215s Need to get 355 MB of archives. 215s After this operation, 1204 MB of additional disk space will be used. 215s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 216s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 216s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB] 228s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B] 228s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 228s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 228s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB] 229s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 229s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB] 229s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB] 232s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB] 234s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB] 236s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB] 238s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB] 240s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB] 243s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB] 265s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB] 266s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 266s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 266s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB] 269s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB] 282s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB] 282s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 282s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 282s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 282s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 282s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 282s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 283s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 283s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 284s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 284s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 284s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 284s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 287s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 287s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB] 288s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB] 301s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB] 301s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 301s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 301s Get:41 http://ftpmaster.internal/ubuntu plucky/universe arm64 hdf5-helpers arm64 1.14.5+repack-3 [17.0 kB] 301s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 302s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 12 [5216 B] 302s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 comerr-dev arm64 2.1-1.47.2-1ubuntu1 [45.1 kB] 302s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libgssrpc4t64 arm64 1.21.3-4ubuntu2 [58.5 kB] 302s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libkadm5clnt-mit12 arm64 1.21.3-4ubuntu2 [40.3 kB] 302s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libkdb5-10t64 arm64 1.21.3-4ubuntu2 [40.9 kB] 302s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libkadm5srv-mit12 arm64 1.21.3-4ubuntu2 [53.8 kB] 302s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 krb5-multidev arm64 1.21.3-4ubuntu2 [125 kB] 302s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 302s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 302s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 302s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 302s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 libblosc1 arm64 1.21.5+ds-1build1 [25.7 kB] 302s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost1.83-dev arm64 1.83.0-4.1ubuntu2 [10.7 MB] 315s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost-dev arm64 1.83.0.2ubuntu1 [4468 B] 315s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libbrotli-dev arm64 1.1.0-2build4 [359 kB] 315s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 315s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 315s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 315s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 315s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 315s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 316s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libidn2-dev arm64 2.3.7-2build2 [120 kB] 316s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libkrb5-dev arm64 1.21.3-4ubuntu2 [11.9 kB] 316s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libldap-dev arm64 2.6.9+dfsg-1~exp2ubuntu1 [318 kB] 316s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 316s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 316s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 316s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libnghttp2-dev arm64 1.64.0-1 [120 kB] 317s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libpsl-dev arm64 0.21.2-1.1build1 [77.2 kB] 317s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-3ubuntu1 [10.1 kB] 317s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-3ubuntu1 [335 kB] 317s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10 [140 kB] 317s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libunbound8 arm64 1.22.0-1ubuntu1 [437 kB] 318s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libgnutls-dane0t64 arm64 3.8.9-2ubuntu2 [24.4 kB] 318s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libgnutls-openssl27t64 arm64 3.8.9-2ubuntu2 [24.4 kB] 318s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libp11-kit-dev arm64 0.25.5-2ubuntu3 [23.5 kB] 318s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libtasn1-6-dev arm64 4.20.0-2 [91.1 kB] 318s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 nettle-dev arm64 3.10.1-1 [1190 kB] 319s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libgnutls28-dev arm64 3.8.9-2ubuntu2 [1143 kB] 321s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 322s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2build7 [69.4 kB] 322s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libssl-dev arm64 3.4.1-1ubuntu1 [3287 kB] 325s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libssh2-1-dev arm64 1.11.1-1 [286 kB] 326s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libzstd-dev arm64 1.5.6+dfsg-2 [353 kB] 326s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libcurl4-openssl-dev arm64 8.12.1-3ubuntu1 [506 kB] 327s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 327s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 327s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 327s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 327s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 328s Get:93 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 328s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-310 arm64 1.14.5+repack-3 [1331 kB] 330s Get:95 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-cpp-310 arm64 1.14.5+repack-3 [117 kB] 330s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-fortran-310 arm64 1.14.5+repack-3 [109 kB] 330s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [59.8 kB] 330s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-fortran-310 arm64 1.14.5+repack-3 [31.8 kB] 330s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-cpp-310 arm64 1.14.5+repack-3 [11.6 kB] 330s Get:100 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 330s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 331s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 331s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 331s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 331s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec-dev arm64 1.1.3-1 [19.3 kB] 331s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-dev arm64 1.14.5+repack-3 [3581 kB] 337s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhnswlib-dev all 0.8.0-1build3 [24.4 kB] 337s Get:108 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 337s Get:109 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 337s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 357s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 357s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 357s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 358s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 358s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 358s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 359s Get:117 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 359s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 360s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 360s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 360s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 360s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 360s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 360s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 360s Get:125 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 364s Get:126 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 370s Get:127 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 371s Get:128 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 371s Get:129 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 371s Get:130 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 372s Get:131 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 372s Get:132 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB] 372s Get:133 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB] 372s Get:134 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB] 372s Get:135 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 372s Get:136 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 372s Get:137 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 373s Get:138 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 373s Get:139 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 373s Get:140 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 374s Get:141 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB] 374s Get:142 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 374s Get:143 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 374s Get:144 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 374s Get:145 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 376s Get:146 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 376s Get:147 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 376s Get:148 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 376s Get:149 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 377s Get:150 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 377s Get:151 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 378s Get:152 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 378s Get:153 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 378s Get:154 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 379s Get:155 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 379s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 436s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 436s Get:158 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 436s Get:159 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 437s Get:160 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 437s Get:161 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 437s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 437s Get:163 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 492s Get:164 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB] 492s Get:165 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 492s Get:166 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B] 492s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 492s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 493s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 497s Get:170 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 500s Get:171 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-iranges arm64 2.40.1-2 [2303 kB] 503s Get:172 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB] 504s Get:173 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bit arm64 4.6.0+dfsg-1 [450 kB] 504s Get:174 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bit64 arm64 4.6.0-1-1ubuntu2 [497 kB] 505s Get:175 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB] 507s Get:176 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 508s Get:177 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 509s Get:178 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 509s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 511s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 511s Get:181 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 511s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 511s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 511s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 511s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 511s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cpp11 all 0.5.2-1 [233 kB] 512s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rsqlite arm64 2.3.9-1 [1247 kB] 513s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-curl arm64 6.2.1+dfsg-1ubuntu1 [196 kB] 514s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 514s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 514s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 514s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 515s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 515s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 515s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 516s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB] 516s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 516s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 517s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 517s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 535s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 539s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 540s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 554s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-keggrest all 1.46.0+dfsg-2 [183 kB] 555s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 558s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 560s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 560s Get:208 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-annotationfilter all 1.30.0+dfsg-2 [247 kB] 561s Get:209 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 561s Get:210 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 561s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 561s Get:212 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 562s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 563s Get:214 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 563s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 564s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 564s Get:217 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 566s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 566s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringi arm64 1.8.4-1build1 [902 kB] 568s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 568s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 570s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-dbplyr all 2.5.0+dfsg-1 [1233 kB] 571s Get:223 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 571s Get:224 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 572s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 572s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 572s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 572s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 572s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-annotationhub all 3.14.0+dfsg-2 [447 kB] 573s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-assorthead all 1.0.1+ds-2 [194 kB] 573s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 576s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB] 583s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB] 584s Get:234 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 584s Get:235 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 585s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 586s Get:237 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-sparsearray arm64 1.6.2+dfsg-1 [1369 kB] 588s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 592s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 592s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 595s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-beachmat arm64 2.22.0+ds-2 [940 kB] 597s Get:242 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 597s Get:243 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 598s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 598s Get:245 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 598s Get:246 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 598s Get:247 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 598s Get:248 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 599s Get:249 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 599s Get:250 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 601s Get:251 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 601s Get:252 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 601s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 601s Get:254 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr2 all 1.1.1-1 [752 kB] 603s Get:255 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 603s Get:256 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xml2 arm64 1.3.7-1 [327 kB] 604s Get:257 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biomart all 2.62.1+dfsg-1 [444 kB] 604s Get:258 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-sparsematrixstats arm64 1.18.0+dfsg-2 [853 kB] 606s Get:259 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-delayedmatrixstats all 1.28.1+ds-1 [502 kB] 607s Get:260 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 609s Get:261 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-locfit arm64 1.5-9.12-1 [514 kB] 610s Get:262 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 610s Get:263 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 612s Get:264 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-64-1 [1110 kB] 614s Get:265 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.167-1 [2311 kB] 618s Get:266 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 623s Get:267 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 625s Get:268 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 625s Get:269 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 627s Get:270 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 628s Get:271 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 628s Get:272 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 629s Get:273 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 630s Get:274 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 635s Get:275 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpparmadillo arm64 14.2.3-1-1 [843 kB] 636s Get:276 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-deseq2 arm64 1.46.0+dfsg-2 [1237 kB] 637s Get:277 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xml arm64 3.99-0.18-1 [1745 kB] 640s Get:278 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bitops arm64 1.0-9-1 [30.2 kB] 640s Get:279 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhtslib arm64 3.2.0+dfsg-2 [1429 kB] 641s Get:280 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rsamtools arm64 2.22.0+dfsg-2 [3668 kB] 645s Get:281 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomicalignments arm64 1.42.0-2 [2164 kB] 648s Get:282 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcurl arm64 1.98-1.16+dfsg-1 [806 kB] 649s Get:283 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rjson arm64 0.2.23-1 [104 kB] 649s Get:284 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 650s Get:285 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rtracklayer arm64 1.66.0-2 [5218 kB] 656s Get:286 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 657s Get:287 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-protgenerics all 1.38.0-2 [239 kB] 657s Get:288 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-ensembldb all 2.30.0+dfsg-3 [1520 kB] 659s Get:289 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhdf5lib arm64 1.28.0+dfsg-2build1 [97.4 kB] 659s Get:290 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhdf5filters arm64 1.18.0+dfsg-2 [135 kB] 660s Get:291 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhdf5 arm64 2.50.2+dfsg-1build1 [819 kB] 661s Get:292 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-hdf5array arm64 1.34.0-2build1 [8783 kB] 671s Get:293 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB] 672s Get:294 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-glmgampoi arm64 1.18.0+dfsg-2 [1212 kB] 673s Get:295 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-txdbmaker all 1.2.1+ds-2 [875 kB] 674s Get:296 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-tximport all 1.34.0+dfsg-2 [90.4 kB] 674s Get:297 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-tximeta all 1.24.0+dfsg-2 [436 kB] 675s Get:298 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-tximportdata all 1.34.0+ds-2 [9562 B] 675s Get:299 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 675s Get:300 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 675s Get:301 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 676s Get:302 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 676s Get:303 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 676s Get:304 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 677s Get:305 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 683s Get:306 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 683s Get:307 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 683s Get:308 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 684s Get:309 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-clipr all 0.8.0-1 [53.5 kB] 684s Get:310 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB] 684s Get:311 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 685s Get:312 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 686s Get:313 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 686s Get:314 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 688s Get:315 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.51+dfsg-1 [573 kB] 689s Get:316 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 689s Get:317 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 689s Get:318 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 690s Get:319 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 691s Get:320 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 698s Get:321 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 698s Get:322 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 698s Get:323 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 698s Get:324 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 699s Get:325 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB] 699s Get:326 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB] 699s Get:327 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 699s Get:328 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tzdb arm64 0.4.0-2 [512 kB] 700s Get:329 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vroom arm64 1.6.5-1 [832 kB] 701s Get:330 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-readr arm64 2.1.5-1 [756 kB] 702s Get:331 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.56-1 [148 kB] 702s Get:332 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 702s Get:333 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 703s Get:334 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 703s Get:335 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 703s Get:336 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 707s Get:337 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 709s Get:338 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-2 [150 kB] 709s Get:339 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 712s Preconfiguring packages ... 712s Fetched 355 MB in 8min 16s (716 kB/s) 712s Selecting previously unselected package libisl23:arm64. 713s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 713s Preparing to unpack .../000-libisl23_0.27-1_arm64.deb ... 713s Unpacking libisl23:arm64 (0.27-1) ... 713s Selecting previously unselected package libmpc3:arm64. 713s Preparing to unpack .../001-libmpc3_1.3.1-1build2_arm64.deb ... 713s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 713s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 713s Preparing to unpack .../002-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 713s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 713s Selecting previously unselected package cpp-14. 713s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_arm64.deb ... 713s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 713s Selecting previously unselected package cpp-aarch64-linux-gnu. 713s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 713s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 713s Selecting previously unselected package cpp. 713s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 713s Unpacking cpp (4:14.2.0-1ubuntu1) ... 713s Selecting previously unselected package libcc1-0:arm64. 713s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_arm64.deb ... 713s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ... 713s Selecting previously unselected package libgomp1:arm64. 713s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_arm64.deb ... 713s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ... 713s Selecting previously unselected package libitm1:arm64. 713s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_arm64.deb ... 713s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ... 713s Selecting previously unselected package libasan8:arm64. 713s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_arm64.deb ... 713s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ... 713s Selecting previously unselected package liblsan0:arm64. 713s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_arm64.deb ... 713s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ... 713s Selecting previously unselected package libtsan2:arm64. 713s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_arm64.deb ... 713s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ... 713s Selecting previously unselected package libubsan1:arm64. 713s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_arm64.deb ... 713s Unpacking libubsan1:arm64 (15-20250222-0ubuntu1) ... 714s Selecting previously unselected package libhwasan0:arm64. 714s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_arm64.deb ... 714s Unpacking libhwasan0:arm64 (15-20250222-0ubuntu1) ... 714s Selecting previously unselected package libgcc-14-dev:arm64. 714s Preparing to unpack .../014-libgcc-14-dev_14.2.0-17ubuntu3_arm64.deb ... 714s Unpacking libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 714s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 714s Preparing to unpack .../015-gcc-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 714s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 714s Selecting previously unselected package gcc-14. 714s Preparing to unpack .../016-gcc-14_14.2.0-17ubuntu3_arm64.deb ... 714s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 714s Selecting previously unselected package gcc-aarch64-linux-gnu. 714s Preparing to unpack .../017-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 714s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 714s Selecting previously unselected package gcc. 714s Preparing to unpack .../018-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ... 714s Unpacking gcc (4:14.2.0-1ubuntu1) ... 714s Selecting previously unselected package libstdc++-14-dev:arm64. 714s Preparing to unpack .../019-libstdc++-14-dev_14.2.0-17ubuntu3_arm64.deb ... 714s Unpacking libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 715s Selecting previously unselected package g++-14-aarch64-linux-gnu. 715s Preparing to unpack .../020-g++-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 715s Unpacking g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 715s Selecting previously unselected package g++-14. 715s Preparing to unpack .../021-g++-14_14.2.0-17ubuntu3_arm64.deb ... 715s Unpacking g++-14 (14.2.0-17ubuntu3) ... 715s Selecting previously unselected package g++-aarch64-linux-gnu. 715s Preparing to unpack .../022-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 715s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 715s Selecting previously unselected package g++. 715s Preparing to unpack .../023-g++_4%3a14.2.0-1ubuntu1_arm64.deb ... 715s Unpacking g++ (4:14.2.0-1ubuntu1) ... 715s Selecting previously unselected package build-essential. 715s Preparing to unpack .../024-build-essential_12.10ubuntu1_arm64.deb ... 715s Unpacking build-essential (12.10ubuntu1) ... 715s Selecting previously unselected package dctrl-tools. 715s Preparing to unpack .../025-dctrl-tools_2.24-3build3_arm64.deb ... 715s Unpacking dctrl-tools (2.24-3build3) ... 715s Selecting previously unselected package fonts-dejavu-mono. 715s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ... 715s Unpacking fonts-dejavu-mono (2.37-8) ... 715s Selecting previously unselected package fonts-dejavu-core. 715s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ... 715s Unpacking fonts-dejavu-core (2.37-8) ... 715s Selecting previously unselected package fontconfig-config. 715s Preparing to unpack .../028-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ... 715s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 715s Selecting previously unselected package libfontconfig1:arm64. 715s Preparing to unpack .../029-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ... 715s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 715s Selecting previously unselected package fontconfig. 715s Preparing to unpack .../030-fontconfig_2.15.0-2ubuntu1_arm64.deb ... 715s Unpacking fontconfig (2.15.0-2ubuntu1) ... 715s Selecting previously unselected package fonts-font-awesome. 715s Preparing to unpack .../031-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 715s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 715s Selecting previously unselected package fonts-glyphicons-halflings. 716s Preparing to unpack .../032-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 716s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 716s Selecting previously unselected package fonts-mathjax. 716s Preparing to unpack .../033-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 716s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 716s Selecting previously unselected package libgfortran5:arm64. 716s Preparing to unpack .../034-libgfortran5_15-20250222-0ubuntu1_arm64.deb ... 716s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ... 716s Selecting previously unselected package libgfortran-14-dev:arm64. 716s Preparing to unpack .../035-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ... 716s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 716s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 716s Preparing to unpack .../036-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 716s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 716s Selecting previously unselected package gfortran-14. 716s Preparing to unpack .../037-gfortran-14_14.2.0-17ubuntu3_arm64.deb ... 716s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 716s Selecting previously unselected package gfortran-aarch64-linux-gnu. 716s Preparing to unpack .../038-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 716s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 716s Selecting previously unselected package gfortran. 716s Preparing to unpack .../039-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ... 716s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 716s Selecting previously unselected package hdf5-helpers. 716s Preparing to unpack .../040-hdf5-helpers_1.14.5+repack-3_arm64.deb ... 716s Unpacking hdf5-helpers (1.14.5+repack-3) ... 716s Selecting previously unselected package icu-devtools. 716s Preparing to unpack .../041-icu-devtools_76.1-1ubuntu2_arm64.deb ... 716s Unpacking icu-devtools (76.1-1ubuntu2) ... 716s Selecting previously unselected package javascript-common. 716s Preparing to unpack .../042-javascript-common_12_all.deb ... 716s Unpacking javascript-common (12) ... 716s Selecting previously unselected package comerr-dev:arm64. 716s Preparing to unpack .../043-comerr-dev_2.1-1.47.2-1ubuntu1_arm64.deb ... 716s Unpacking comerr-dev:arm64 (2.1-1.47.2-1ubuntu1) ... 716s Selecting previously unselected package libgssrpc4t64:arm64. 716s Preparing to unpack .../044-libgssrpc4t64_1.21.3-4ubuntu2_arm64.deb ... 716s Unpacking libgssrpc4t64:arm64 (1.21.3-4ubuntu2) ... 716s Selecting previously unselected package libkadm5clnt-mit12:arm64. 716s Preparing to unpack .../045-libkadm5clnt-mit12_1.21.3-4ubuntu2_arm64.deb ... 716s Unpacking libkadm5clnt-mit12:arm64 (1.21.3-4ubuntu2) ... 716s Selecting previously unselected package libkdb5-10t64:arm64. 716s Preparing to unpack .../046-libkdb5-10t64_1.21.3-4ubuntu2_arm64.deb ... 716s Unpacking libkdb5-10t64:arm64 (1.21.3-4ubuntu2) ... 716s Selecting previously unselected package libkadm5srv-mit12:arm64. 716s Preparing to unpack .../047-libkadm5srv-mit12_1.21.3-4ubuntu2_arm64.deb ... 716s Unpacking libkadm5srv-mit12:arm64 (1.21.3-4ubuntu2) ... 716s Selecting previously unselected package krb5-multidev:arm64. 716s Preparing to unpack .../048-krb5-multidev_1.21.3-4ubuntu2_arm64.deb ... 716s Unpacking krb5-multidev:arm64 (1.21.3-4ubuntu2) ... 716s Selecting previously unselected package libaec0:arm64. 716s Preparing to unpack .../049-libaec0_1.1.3-1_arm64.deb ... 716s Unpacking libaec0:arm64 (1.1.3-1) ... 716s Selecting previously unselected package libblas3:arm64. 716s Preparing to unpack .../050-libblas3_3.12.1-2_arm64.deb ... 716s Unpacking libblas3:arm64 (3.12.1-2) ... 717s Selecting previously unselected package libblas-dev:arm64. 717s Preparing to unpack .../051-libblas-dev_3.12.1-2_arm64.deb ... 717s Unpacking libblas-dev:arm64 (3.12.1-2) ... 717s Selecting previously unselected package libsnappy1v5:arm64. 717s Preparing to unpack .../052-libsnappy1v5_1.2.1-1_arm64.deb ... 717s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 717s Selecting previously unselected package libblosc1:arm64. 717s Preparing to unpack .../053-libblosc1_1.21.5+ds-1build1_arm64.deb ... 717s Unpacking libblosc1:arm64 (1.21.5+ds-1build1) ... 717s Selecting previously unselected package libboost1.83-dev:arm64. 717s Preparing to unpack .../054-libboost1.83-dev_1.83.0-4.1ubuntu2_arm64.deb ... 717s Unpacking libboost1.83-dev:arm64 (1.83.0-4.1ubuntu2) ... 718s Selecting previously unselected package libboost-dev:arm64. 718s Preparing to unpack .../055-libboost-dev_1.83.0.2ubuntu1_arm64.deb ... 718s Unpacking libboost-dev:arm64 (1.83.0.2ubuntu1) ... 718s Selecting previously unselected package libbrotli-dev:arm64. 718s Preparing to unpack .../056-libbrotli-dev_1.1.0-2build4_arm64.deb ... 718s Unpacking libbrotli-dev:arm64 (1.1.0-2build4) ... 718s Selecting previously unselected package libbz2-dev:arm64. 718s Preparing to unpack .../057-libbz2-dev_1.0.8-6_arm64.deb ... 718s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 719s Selecting previously unselected package libpixman-1-0:arm64. 719s Preparing to unpack .../058-libpixman-1-0_0.44.0-3_arm64.deb ... 719s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 719s Selecting previously unselected package libxcb-render0:arm64. 719s Preparing to unpack .../059-libxcb-render0_1.17.0-2_arm64.deb ... 719s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 719s Selecting previously unselected package libxcb-shm0:arm64. 719s Preparing to unpack .../060-libxcb-shm0_1.17.0-2_arm64.deb ... 719s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 719s Selecting previously unselected package libxrender1:arm64. 719s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 719s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 719s Selecting previously unselected package libcairo2:arm64. 719s Preparing to unpack .../062-libcairo2_1.18.2-2_arm64.deb ... 719s Unpacking libcairo2:arm64 (1.18.2-2) ... 719s Selecting previously unselected package libidn2-dev:arm64. 719s Preparing to unpack .../063-libidn2-dev_2.3.7-2build2_arm64.deb ... 719s Unpacking libidn2-dev:arm64 (2.3.7-2build2) ... 719s Selecting previously unselected package libkrb5-dev:arm64. 719s Preparing to unpack .../064-libkrb5-dev_1.21.3-4ubuntu2_arm64.deb ... 719s Unpacking libkrb5-dev:arm64 (1.21.3-4ubuntu2) ... 719s Selecting previously unselected package libldap-dev:arm64. 719s Preparing to unpack .../065-libldap-dev_2.6.9+dfsg-1~exp2ubuntu1_arm64.deb ... 719s Unpacking libldap-dev:arm64 (2.6.9+dfsg-1~exp2ubuntu1) ... 719s Selecting previously unselected package libpkgconf3:arm64. 719s Preparing to unpack .../066-libpkgconf3_1.8.1-4_arm64.deb ... 719s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 719s Selecting previously unselected package pkgconf-bin. 719s Preparing to unpack .../067-pkgconf-bin_1.8.1-4_arm64.deb ... 719s Unpacking pkgconf-bin (1.8.1-4) ... 719s Selecting previously unselected package pkgconf:arm64. 719s Preparing to unpack .../068-pkgconf_1.8.1-4_arm64.deb ... 719s Unpacking pkgconf:arm64 (1.8.1-4) ... 719s Selecting previously unselected package libnghttp2-dev:arm64. 719s Preparing to unpack .../069-libnghttp2-dev_1.64.0-1_arm64.deb ... 719s Unpacking libnghttp2-dev:arm64 (1.64.0-1) ... 719s Selecting previously unselected package libpsl-dev:arm64. 719s Preparing to unpack .../070-libpsl-dev_0.21.2-1.1build1_arm64.deb ... 719s Unpacking libpsl-dev:arm64 (0.21.2-1.1build1) ... 719s Selecting previously unselected package libgmpxx4ldbl:arm64. 719s Preparing to unpack .../071-libgmpxx4ldbl_2%3a6.3.0+dfsg-3ubuntu1_arm64.deb ... 719s Unpacking libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-3ubuntu1) ... 719s Selecting previously unselected package libgmp-dev:arm64. 719s Preparing to unpack .../072-libgmp-dev_2%3a6.3.0+dfsg-3ubuntu1_arm64.deb ... 719s Unpacking libgmp-dev:arm64 (2:6.3.0+dfsg-3ubuntu1) ... 719s Selecting previously unselected package libevent-2.1-7t64:arm64. 719s Preparing to unpack .../073-libevent-2.1-7t64_2.1.12-stable-10_arm64.deb ... 719s Unpacking libevent-2.1-7t64:arm64 (2.1.12-stable-10) ... 719s Selecting previously unselected package libunbound8:arm64. 719s Preparing to unpack .../074-libunbound8_1.22.0-1ubuntu1_arm64.deb ... 719s Unpacking libunbound8:arm64 (1.22.0-1ubuntu1) ... 719s Selecting previously unselected package libgnutls-dane0t64:arm64. 719s Preparing to unpack .../075-libgnutls-dane0t64_3.8.9-2ubuntu2_arm64.deb ... 719s Unpacking libgnutls-dane0t64:arm64 (3.8.9-2ubuntu2) ... 719s Selecting previously unselected package libgnutls-openssl27t64:arm64. 719s Preparing to unpack .../076-libgnutls-openssl27t64_3.8.9-2ubuntu2_arm64.deb ... 719s Unpacking libgnutls-openssl27t64:arm64 (3.8.9-2ubuntu2) ... 719s Selecting previously unselected package libp11-kit-dev:arm64. 719s Preparing to unpack .../077-libp11-kit-dev_0.25.5-2ubuntu3_arm64.deb ... 719s Unpacking libp11-kit-dev:arm64 (0.25.5-2ubuntu3) ... 719s Selecting previously unselected package libtasn1-6-dev:arm64. 719s Preparing to unpack .../078-libtasn1-6-dev_4.20.0-2_arm64.deb ... 719s Unpacking libtasn1-6-dev:arm64 (4.20.0-2) ... 719s Selecting previously unselected package nettle-dev:arm64. 719s Preparing to unpack .../079-nettle-dev_3.10.1-1_arm64.deb ... 719s Unpacking nettle-dev:arm64 (3.10.1-1) ... 720s Selecting previously unselected package libgnutls28-dev:arm64. 720s Preparing to unpack .../080-libgnutls28-dev_3.8.9-2ubuntu2_arm64.deb ... 720s Unpacking libgnutls28-dev:arm64 (3.8.9-2ubuntu2) ... 720s Selecting previously unselected package zlib1g-dev:arm64. 720s Preparing to unpack .../081-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 720s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 720s Selecting previously unselected package librtmp-dev:arm64. 720s Preparing to unpack .../082-librtmp-dev_2.4+20151223.gitfa8646d.1-2build7_arm64.deb ... 720s Unpacking librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2build7) ... 720s Selecting previously unselected package libssl-dev:arm64. 720s Preparing to unpack .../083-libssl-dev_3.4.1-1ubuntu1_arm64.deb ... 720s Unpacking libssl-dev:arm64 (3.4.1-1ubuntu1) ... 720s Selecting previously unselected package libssh2-1-dev:arm64. 720s Preparing to unpack .../084-libssh2-1-dev_1.11.1-1_arm64.deb ... 720s Unpacking libssh2-1-dev:arm64 (1.11.1-1) ... 720s Selecting previously unselected package libzstd-dev:arm64. 720s Preparing to unpack .../085-libzstd-dev_1.5.6+dfsg-2_arm64.deb ... 720s Unpacking libzstd-dev:arm64 (1.5.6+dfsg-2) ... 720s Selecting previously unselected package libcurl4-openssl-dev:arm64. 720s Preparing to unpack .../086-libcurl4-openssl-dev_8.12.1-3ubuntu1_arm64.deb ... 720s Unpacking libcurl4-openssl-dev:arm64 (8.12.1-3ubuntu1) ... 720s Selecting previously unselected package libdatrie1:arm64. 720s Preparing to unpack .../087-libdatrie1_0.2.13-3build1_arm64.deb ... 720s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 720s Selecting previously unselected package libdeflate0:arm64. 720s Preparing to unpack .../088-libdeflate0_1.23-1_arm64.deb ... 720s Unpacking libdeflate0:arm64 (1.23-1) ... 720s Selecting previously unselected package libdeflate-dev:arm64. 720s Preparing to unpack .../089-libdeflate-dev_1.23-1_arm64.deb ... 720s Unpacking libdeflate-dev:arm64 (1.23-1) ... 720s Selecting previously unselected package libgraphite2-3:arm64. 720s Preparing to unpack .../090-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 720s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 720s Selecting previously unselected package libharfbuzz0b:arm64. 720s Preparing to unpack .../091-libharfbuzz0b_10.2.0-1_arm64.deb ... 720s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 720s Selecting previously unselected package libsz2:arm64. 720s Preparing to unpack .../092-libsz2_1.1.3-1_arm64.deb ... 720s Unpacking libsz2:arm64 (1.1.3-1) ... 720s Selecting previously unselected package libhdf5-310:arm64. 720s Preparing to unpack .../093-libhdf5-310_1.14.5+repack-3_arm64.deb ... 720s Unpacking libhdf5-310:arm64 (1.14.5+repack-3) ... 720s Selecting previously unselected package libhdf5-cpp-310:arm64. 720s Preparing to unpack .../094-libhdf5-cpp-310_1.14.5+repack-3_arm64.deb ... 720s Unpacking libhdf5-cpp-310:arm64 (1.14.5+repack-3) ... 721s Selecting previously unselected package libhdf5-fortran-310:arm64. 721s Preparing to unpack .../095-libhdf5-fortran-310_1.14.5+repack-3_arm64.deb ... 721s Unpacking libhdf5-fortran-310:arm64 (1.14.5+repack-3) ... 721s Selecting previously unselected package libhdf5-hl-310:arm64. 721s Preparing to unpack .../096-libhdf5-hl-310_1.14.5+repack-3_arm64.deb ... 721s Unpacking libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 721s Selecting previously unselected package libhdf5-hl-fortran-310:arm64. 721s Preparing to unpack .../097-libhdf5-hl-fortran-310_1.14.5+repack-3_arm64.deb ... 721s Unpacking libhdf5-hl-fortran-310:arm64 (1.14.5+repack-3) ... 721s Selecting previously unselected package libhdf5-hl-cpp-310:arm64. 721s Preparing to unpack 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Selecting previously unselected package libicu-dev:arm64. 722s Preparing to unpack .../109-libicu-dev_76.1-1ubuntu2_arm64.deb ... 722s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 722s Selecting previously unselected package libjs-bootstrap. 722s Preparing to unpack .../110-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 722s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 722s Selecting previously unselected package libjs-popper.js. 722s Preparing to unpack .../111-libjs-popper.js_1.16.1+ds-6_all.deb ... 722s Unpacking libjs-popper.js (1.16.1+ds-6) ... 722s Selecting previously unselected package libjs-bootstrap4. 722s Preparing to unpack .../112-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 722s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 722s Selecting previously unselected package libjs-d3. 722s Preparing to unpack .../113-libjs-d3_3.5.17-4_all.deb ... 722s Unpacking libjs-d3 (3.5.17-4) ... 722s Selecting previously unselected package libjs-es5-shim. 722s Preparing to unpack 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libthai-data (0.1.29-2build1) ... 723s Selecting previously unselected package libthai0:arm64. 723s Preparing to unpack .../130-libthai0_0.1.29-2build1_arm64.deb ... 723s Unpacking libthai0:arm64 (0.1.29-2build1) ... 723s Selecting previously unselected package libpango-1.0-0:arm64. 723s Preparing to unpack .../131-libpango-1.0-0_1.56.2-1_arm64.deb ... 723s Unpacking libpango-1.0-0:arm64 (1.56.2-1) ... 723s Selecting previously unselected package libpangoft2-1.0-0:arm64. 723s Preparing to unpack .../132-libpangoft2-1.0-0_1.56.2-1_arm64.deb ... 723s Unpacking libpangoft2-1.0-0:arm64 (1.56.2-1) ... 723s Selecting previously unselected package libpangocairo-1.0-0:arm64. 723s Preparing to unpack .../133-libpangocairo-1.0-0_1.56.2-1_arm64.deb ... 723s Unpacking libpangocairo-1.0-0:arm64 (1.56.2-1) ... 723s Selecting previously unselected package libpaper2:arm64. 723s Preparing to unpack .../134-libpaper2_2.2.5-0.3_arm64.deb ... 723s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 723s Selecting previously unselected package libpaper-utils. 723s Preparing to unpack .../135-libpaper-utils_2.2.5-0.3_arm64.deb ... 723s Unpacking libpaper-utils (2.2.5-0.3) ... 723s Selecting previously unselected package libpcre2-16-0:arm64. 723s Preparing to unpack .../136-libpcre2-16-0_10.45-1_arm64.deb ... 723s Unpacking libpcre2-16-0:arm64 (10.45-1) ... 723s Selecting previously unselected package libpcre2-32-0:arm64. 723s Preparing to unpack .../137-libpcre2-32-0_10.45-1_arm64.deb ... 723s Unpacking libpcre2-32-0:arm64 (10.45-1) ... 723s Selecting previously unselected package libpcre2-posix3:arm64. 723s Preparing to unpack .../138-libpcre2-posix3_10.45-1_arm64.deb ... 723s Unpacking libpcre2-posix3:arm64 (10.45-1) ... 723s Selecting previously unselected package libpcre2-dev:arm64. 723s Preparing to unpack .../139-libpcre2-dev_10.45-1_arm64.deb ... 723s Unpacking libpcre2-dev:arm64 (10.45-1) ... 723s Selecting previously unselected package libpng-dev:arm64. 723s Preparing to unpack .../140-libpng-dev_1.6.47-1_arm64.deb ... 723s Unpacking libpng-dev:arm64 (1.6.47-1) ... 724s Selecting previously unselected package libreadline-dev:arm64. 724s Preparing to unpack .../141-libreadline-dev_8.2-6_arm64.deb ... 724s Unpacking libreadline-dev:arm64 (8.2-6) ... 724s Selecting previously unselected package libsharpyuv0:arm64. 724s Preparing to unpack .../142-libsharpyuv0_1.5.0-0.1_arm64.deb ... 724s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 724s Selecting previously unselected package libsm6:arm64. 724s Preparing to unpack .../143-libsm6_2%3a1.2.4-1_arm64.deb ... 724s Unpacking libsm6:arm64 (2:1.2.4-1) ... 724s Selecting previously unselected package libtcl8.6:arm64. 724s Preparing to unpack .../144-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 724s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 724s Selecting previously unselected package libjbig0:arm64. 724s Preparing to unpack .../145-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 724s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 724s Selecting previously unselected package libwebp7:arm64. 724s Preparing to unpack .../146-libwebp7_1.5.0-0.1_arm64.deb ... 724s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 724s Selecting previously unselected package libtiff6:arm64. 724s Preparing to unpack .../147-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 724s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 724s Selecting previously unselected package libxft2:arm64. 724s Preparing to unpack .../148-libxft2_2.3.6-1build1_arm64.deb ... 724s Unpacking libxft2:arm64 (2.3.6-1build1) ... 724s Selecting previously unselected package libxss1:arm64. 724s Preparing to unpack .../149-libxss1_1%3a1.2.3-1build3_arm64.deb ... 724s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 724s Selecting previously unselected package libtk8.6:arm64. 724s Preparing to unpack .../150-libtk8.6_8.6.16-1_arm64.deb ... 724s Unpacking libtk8.6:arm64 (8.6.16-1) ... 724s Selecting previously unselected package libxt6t64:arm64. 724s Preparing to unpack .../151-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 724s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 724s Selecting previously unselected package zip. 724s Preparing to unpack .../152-zip_3.0-14ubuntu2_arm64.deb ... 724s Unpacking zip (3.0-14ubuntu2) ... 724s Selecting previously unselected package unzip. 724s Preparing to unpack .../153-unzip_6.0-28ubuntu6_arm64.deb ... 724s Unpacking unzip (6.0-28ubuntu6) ... 724s Selecting previously unselected package xdg-utils. 724s Preparing to unpack .../154-xdg-utils_1.2.1-2ubuntu1_all.deb ... 724s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 724s Selecting previously unselected package r-base-core. 724s Preparing to unpack .../155-r-base-core_4.4.3-1_arm64.deb ... 724s Unpacking r-base-core (4.4.3-1) ... 725s Selecting previously unselected package r-cran-littler. 725s Preparing to unpack .../156-r-cran-littler_0.3.20-2_arm64.deb ... 725s Unpacking r-cran-littler (0.3.20-2) ... 725s Selecting previously unselected package littler. 725s Preparing to unpack .../157-littler_0.3.20-2_all.deb ... 725s Unpacking littler (0.3.20-2) ... 725s Selecting previously unselected package node-bootstrap-sass. 725s Preparing to unpack .../158-node-bootstrap-sass_3.4.3-2_all.deb ... 725s Unpacking node-bootstrap-sass (3.4.3-2) ... 725s Selecting previously unselected package node-html5shiv. 725s Preparing to unpack .../159-node-html5shiv_3.7.3+dfsg-5_all.deb ... 725s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 725s Selecting previously unselected package node-normalize.css. 725s Preparing to unpack .../160-node-normalize.css_8.0.1-5_all.deb ... 725s Unpacking node-normalize.css (8.0.1-5) ... 725s Selecting previously unselected package pandoc-data. 725s Preparing to unpack .../161-pandoc-data_3.1.11.1-3build1_all.deb ... 725s Unpacking pandoc-data (3.1.11.1-3build1) ... 725s Selecting previously unselected package pandoc. 725s Preparing to unpack .../162-pandoc_3.1.11.1+ds-2_arm64.deb ... 725s Unpacking pandoc (3.1.11.1+ds-2) ... 726s Selecting previously unselected package liblzma-dev:arm64. 726s Preparing to unpack .../163-liblzma-dev_5.6.4-1_arm64.deb ... 726s Unpacking liblzma-dev:arm64 (5.6.4-1) ... 726s Selecting previously unselected package libtirpc-dev:arm64. 726s Preparing to unpack .../164-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 726s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 726s Selecting previously unselected package r-base-dev. 726s Preparing to unpack .../165-r-base-dev_4.4.3-1_all.deb ... 726s Unpacking r-base-dev (4.4.3-1) ... 726s Selecting previously unselected package pkg-r-autopkgtest. 726s Preparing to unpack .../166-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 726s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 726s Selecting previously unselected package r-bioc-biocgenerics. 726s Preparing to unpack .../167-r-bioc-biocgenerics_0.52.0-2_all.deb ... 726s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 726s Selecting previously unselected package r-bioc-biobase. 726s Preparing to unpack .../168-r-bioc-biobase_2.66.0-2_arm64.deb ... 726s Unpacking r-bioc-biobase (2.66.0-2) ... 726s Selecting previously unselected package r-bioc-s4vectors. 726s Preparing to unpack .../169-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 726s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 726s Selecting previously unselected package r-bioc-iranges. 726s Preparing to unpack .../170-r-bioc-iranges_2.40.1-2_arm64.deb ... 726s Unpacking r-bioc-iranges (2.40.1-2) ... 726s Selecting previously unselected package r-cran-dbi. 726s Preparing to unpack .../171-r-cran-dbi_1.2.3-1_all.deb ... 726s Unpacking r-cran-dbi (1.2.3-1) ... 726s Selecting previously unselected package r-cran-bit. 726s Preparing to unpack .../172-r-cran-bit_4.6.0+dfsg-1_arm64.deb ... 726s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 726s Selecting previously unselected package r-cran-bit64. 726s Preparing to unpack .../173-r-cran-bit64_4.6.0-1-1ubuntu2_arm64.deb ... 726s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 726s Selecting previously unselected package r-cran-rlang. 726s Preparing to unpack .../174-r-cran-rlang_1.1.5-1_arm64.deb ... 726s Unpacking r-cran-rlang (1.1.5-1) ... 726s Selecting previously unselected package r-cran-cli. 726s Preparing to unpack .../175-r-cran-cli_3.6.4-1_arm64.deb ... 726s Unpacking r-cran-cli (3.6.4-1) ... 727s Selecting previously unselected package r-cran-glue. 727s Preparing to unpack .../176-r-cran-glue_1.8.0-1_arm64.deb ... 727s Unpacking r-cran-glue (1.8.0-1) ... 727s Selecting previously unselected package r-cran-lifecycle. 727s Preparing to unpack .../177-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 727s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 727s Selecting previously unselected package r-cran-vctrs. 727s Preparing to unpack .../178-r-cran-vctrs_0.6.5-1_arm64.deb ... 727s Unpacking r-cran-vctrs (0.6.5-1) ... 727s Selecting previously unselected package r-cran-blob. 727s Preparing to unpack .../179-r-cran-blob_1.2.4-1_all.deb ... 727s Unpacking r-cran-blob (1.2.4-1) ... 727s Selecting previously unselected package r-cran-fastmap. 727s Preparing to unpack .../180-r-cran-fastmap_1.2.0-1_arm64.deb ... 727s Unpacking r-cran-fastmap (1.2.0-1) ... 727s Selecting previously unselected package r-cran-cachem. 727s Preparing to unpack .../181-r-cran-cachem_1.1.0-1_arm64.deb ... 727s Unpacking r-cran-cachem (1.1.0-1) ... 727s Selecting previously unselected package r-cran-memoise. 727s Preparing to unpack .../182-r-cran-memoise_2.0.1-1_all.deb ... 727s Unpacking r-cran-memoise (2.0.1-1) ... 727s Selecting previously unselected package r-cran-pkgconfig. 727s Preparing to unpack .../183-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 727s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 727s Selecting previously unselected package r-cran-plogr. 727s Preparing to unpack .../184-r-cran-plogr_0.2.0-3build1_all.deb ... 727s Unpacking r-cran-plogr (0.2.0-3build1) ... 727s Selecting previously unselected package r-cran-cpp11. 727s Preparing to unpack .../185-r-cran-cpp11_0.5.2-1_all.deb ... 727s Unpacking r-cran-cpp11 (0.5.2-1) ... 727s Selecting previously unselected package r-cran-rsqlite. 727s Preparing to unpack .../186-r-cran-rsqlite_2.3.9-1_arm64.deb ... 727s Unpacking r-cran-rsqlite (2.3.9-1) ... 727s Selecting previously unselected package r-cran-curl. 727s Preparing to unpack .../187-r-cran-curl_6.2.1+dfsg-1ubuntu1_arm64.deb ... 727s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 727s Selecting previously unselected package r-cran-jsonlite. 727s Preparing to unpack .../188-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 727s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 727s Selecting previously unselected package r-cran-mime. 727s Preparing to unpack .../189-r-cran-mime_0.12-2_arm64.deb ... 727s Unpacking r-cran-mime (0.12-2) ... 727s Selecting previously unselected package r-cran-sys. 727s Preparing to unpack .../190-r-cran-sys_3.4.3-1_arm64.deb ... 727s Unpacking r-cran-sys (3.4.3-1) ... 727s Selecting previously unselected package r-cran-askpass. 727s Preparing to unpack .../191-r-cran-askpass_1.2.1-1_arm64.deb ... 727s Unpacking r-cran-askpass (1.2.1-1) ... 727s Selecting previously unselected package r-cran-openssl. 727s Preparing to unpack .../192-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 727s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 727s Selecting previously unselected package r-cran-r6. 727s Preparing to unpack .../193-r-cran-r6_2.6.1-1_all.deb ... 727s Unpacking r-cran-r6 (2.6.1-1) ... 727s Selecting previously unselected package r-cran-httr. 727s Preparing to unpack .../194-r-cran-httr_1.4.7+dfsg-1_all.deb ... 727s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 727s Selecting previously unselected package r-cran-png. 727s Preparing to unpack .../195-r-cran-png_0.1-8-1build2_arm64.deb ... 727s Unpacking r-cran-png (0.1-8-1build2) ... 728s Selecting previously unselected package r-bioc-zlibbioc. 728s Preparing to unpack .../196-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 728s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 728s Selecting previously unselected package r-bioc-xvector. 728s Preparing to unpack .../197-r-bioc-xvector_0.46.0-2_arm64.deb ... 728s Unpacking r-bioc-xvector (0.46.0-2) ... 728s Selecting previously unselected package r-bioc-ucsc.utils. 728s Preparing to unpack .../198-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 728s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 728s Selecting previously unselected package r-bioc-genomeinfodbdata. 728s Preparing to unpack .../199-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 728s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 728s Selecting previously unselected package r-bioc-genomeinfodb. 728s Preparing to unpack .../200-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 728s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 728s Selecting previously unselected package r-cran-crayon. 728s Preparing to unpack .../201-r-cran-crayon_1.5.3-1_all.deb ... 728s Unpacking r-cran-crayon (1.5.3-1) ... 728s Selecting previously unselected package r-bioc-biostrings. 728s Preparing to unpack .../202-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 728s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 728s Selecting previously unselected package r-bioc-keggrest. 728s Preparing to unpack .../203-r-bioc-keggrest_1.46.0+dfsg-2_all.deb ... 728s Unpacking r-bioc-keggrest (1.46.0+dfsg-2) ... 728s Selecting previously unselected package r-bioc-annotationdbi. 728s Preparing to unpack .../204-r-bioc-annotationdbi_1.68.0-2_all.deb ... 728s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 728s Selecting previously unselected package r-bioc-genomicranges. 728s Preparing to unpack .../205-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 728s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 728s Selecting previously unselected package r-cran-lazyeval. 728s Preparing to unpack .../206-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 728s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 728s Selecting previously unselected package r-bioc-annotationfilter. 728s Preparing to unpack .../207-r-bioc-annotationfilter_1.30.0+dfsg-2_all.deb ... 728s Unpacking r-bioc-annotationfilter (1.30.0+dfsg-2) ... 728s Selecting previously unselected package r-cran-generics. 728s Preparing to unpack .../208-r-cran-generics_0.1.3-1_all.deb ... 728s Unpacking r-cran-generics (0.1.3-1) ... 728s Selecting previously unselected package r-cran-magrittr. 728s Preparing to unpack .../209-r-cran-magrittr_2.0.3-1_arm64.deb ... 728s Unpacking r-cran-magrittr (2.0.3-1) ... 728s Selecting previously unselected package r-cran-utf8. 728s Preparing to unpack .../210-r-cran-utf8_1.2.4-1_arm64.deb ... 728s Unpacking r-cran-utf8 (1.2.4-1) ... 728s Selecting previously unselected package r-cran-pillar. 728s Preparing to unpack .../211-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 728s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 728s Selecting previously unselected package r-cran-fansi. 728s Preparing to unpack .../212-r-cran-fansi_1.0.5-1_arm64.deb ... 728s Unpacking r-cran-fansi (1.0.5-1) ... 729s Selecting previously unselected package r-cran-tibble. 729s Preparing to unpack .../213-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 729s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 729s Selecting previously unselected package r-cran-withr. 729s Preparing to unpack .../214-r-cran-withr_3.0.2+dfsg-1_all.deb ... 729s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 729s Selecting previously unselected package r-cran-tidyselect. 729s Preparing to unpack .../215-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 729s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 729s Selecting previously unselected package r-cran-dplyr. 729s Preparing to unpack .../216-r-cran-dplyr_1.1.4-4_arm64.deb ... 729s Unpacking r-cran-dplyr (1.1.4-4) ... 729s Selecting previously unselected package r-cran-purrr. 729s Preparing to unpack .../217-r-cran-purrr_1.0.4-1_arm64.deb ... 729s Unpacking r-cran-purrr (1.0.4-1) ... 729s Selecting previously unselected package r-cran-stringi. 729s Preparing to unpack .../218-r-cran-stringi_1.8.4-1build1_arm64.deb ... 729s Unpacking r-cran-stringi (1.8.4-1build1) ... 729s Selecting previously unselected package r-cran-stringr. 729s Preparing to unpack .../219-r-cran-stringr_1.5.1-1_all.deb ... 729s Unpacking r-cran-stringr (1.5.1-1) ... 729s Selecting previously unselected package r-cran-tidyr. 729s Preparing to unpack .../220-r-cran-tidyr_1.3.1-1_arm64.deb ... 729s Unpacking r-cran-tidyr (1.3.1-1) ... 729s Selecting previously unselected package r-cran-dbplyr. 729s Preparing to unpack .../221-r-cran-dbplyr_2.5.0+dfsg-1_all.deb ... 729s Unpacking r-cran-dbplyr (2.5.0+dfsg-1) ... 729s Selecting previously unselected package r-cran-filelock. 729s Preparing to unpack .../222-r-cran-filelock_1.0.3-1_arm64.deb ... 729s Unpacking r-cran-filelock (1.0.3-1) ... 729s Selecting previously unselected package r-bioc-biocfilecache. 729s Preparing to unpack .../223-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 729s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 729s Selecting previously unselected package r-cran-biocmanager. 729s Preparing to unpack .../224-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 729s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 729s Selecting previously unselected package r-bioc-biocversion. 729s Preparing to unpack .../225-r-bioc-biocversion_3.20.0-2_all.deb ... 729s Unpacking r-bioc-biocversion (3.20.0-2) ... 729s Selecting previously unselected package r-cran-rappdirs. 729s Preparing to unpack .../226-r-cran-rappdirs_0.3.3-1_arm64.deb ... 729s Unpacking r-cran-rappdirs (0.3.3-1) ... 729s Selecting previously unselected package r-cran-yaml. 729s Preparing to unpack .../227-r-cran-yaml_2.3.10-1_arm64.deb ... 729s Unpacking r-cran-yaml (2.3.10-1) ... 729s Selecting previously unselected package r-bioc-annotationhub. 729s Preparing to unpack .../228-r-bioc-annotationhub_3.14.0+dfsg-2_all.deb ... 729s Unpacking r-bioc-annotationhub (3.14.0+dfsg-2) ... 729s Selecting previously unselected package r-bioc-assorthead. 729s Preparing to unpack .../229-r-bioc-assorthead_1.0.1+ds-2_all.deb ... 729s Unpacking r-bioc-assorthead (1.0.1+ds-2) ... 729s Selecting previously unselected package r-cran-lattice. 729s Preparing to unpack .../230-r-cran-lattice_0.22-6-1_arm64.deb ... 729s Unpacking r-cran-lattice (0.22-6-1) ... 730s Selecting previously unselected package r-cran-matrix. 730s Preparing to unpack .../231-r-cran-matrix_1.7-3-1_arm64.deb ... 730s Unpacking r-cran-matrix (1.7-3-1) ... 730s Selecting previously unselected package r-cran-matrixstats. 730s Preparing to unpack .../232-r-cran-matrixstats_1.5.0-1_arm64.deb ... 730s Unpacking r-cran-matrixstats (1.5.0-1) ... 730s Selecting previously unselected package r-bioc-matrixgenerics. 730s Preparing to unpack .../233-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 730s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 730s Selecting previously unselected package r-cran-abind. 730s Preparing to unpack .../234-r-cran-abind_1.4-8-1_all.deb ... 730s Unpacking r-cran-abind (1.4-8-1) ... 730s Selecting previously unselected package r-bioc-s4arrays. 730s Preparing to unpack .../235-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 730s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 730s Selecting previously unselected package r-bioc-sparsearray. 730s Preparing to unpack .../236-r-bioc-sparsearray_1.6.2+dfsg-1_arm64.deb ... 730s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 730s Selecting previously unselected package r-bioc-delayedarray. 730s Preparing to unpack .../237-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 730s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 730s Selecting previously unselected package r-cran-pkgkitten. 730s Preparing to unpack .../238-r-cran-pkgkitten_0.2.4-1_all.deb ... 730s Unpacking r-cran-pkgkitten (0.2.4-1) ... 730s Selecting previously unselected package r-cran-rcpp. 730s Preparing to unpack .../239-r-cran-rcpp_1.0.14-1_arm64.deb ... 730s Unpacking r-cran-rcpp (1.0.14-1) ... 730s Selecting previously unselected package r-bioc-beachmat. 730s Preparing to unpack .../240-r-bioc-beachmat_2.22.0+ds-2_arm64.deb ... 730s Unpacking r-bioc-beachmat (2.22.0+ds-2) ... 730s Selecting previously unselected package r-bioc-biocio. 730s Preparing to unpack .../241-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 730s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 730s Selecting previously unselected package r-cran-formatr. 730s Preparing to unpack .../242-r-cran-formatr_1.14-2_all.deb ... 730s Unpacking r-cran-formatr (1.14-2) ... 730s Selecting previously unselected package r-cran-lambda.r. 730s Preparing to unpack .../243-r-cran-lambda.r_1.2.4-2build1_all.deb ... 730s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 730s Selecting previously unselected package r-cran-futile.options. 730s Preparing to unpack .../244-r-cran-futile.options_1.0.1-3build1_all.deb ... 730s Unpacking r-cran-futile.options (1.0.1-3build1) ... 730s Selecting previously unselected package r-cran-futile.logger. 730s Preparing to unpack .../245-r-cran-futile.logger_1.4.3-4build1_all.deb ... 730s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 730s Selecting previously unselected package r-cran-snow. 730s Preparing to unpack .../246-r-cran-snow_1%3a0.4.4-2_all.deb ... 730s Unpacking r-cran-snow (1:0.4.4-2) ... 731s Selecting previously unselected package r-cran-codetools. 731s Preparing to unpack .../247-r-cran-codetools_0.2-20-1_all.deb ... 731s Unpacking r-cran-codetools (0.2-20-1) ... 731s Selecting previously unselected package r-cran-bh. 731s Preparing to unpack .../248-r-cran-bh_1.84.0-1_all.deb ... 731s Unpacking r-cran-bh (1.84.0-1) ... 731s Selecting previously unselected package r-bioc-biocparallel. 731s Preparing to unpack .../249-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 731s Unpacking r-bioc-biocparallel (1.40.0-2) ... 731s Selecting previously unselected package r-cran-hms. 731s Preparing to unpack .../250-r-cran-hms_1.1.3-1_all.deb ... 731s Unpacking r-cran-hms (1.1.3-1) ... 731s Selecting previously unselected package r-cran-prettyunits. 731s Preparing to unpack .../251-r-cran-prettyunits_1.2.0-1_all.deb ... 731s Unpacking r-cran-prettyunits (1.2.0-1) ... 731s Selecting previously unselected package r-cran-progress. 731s Preparing to unpack .../252-r-cran-progress_1.2.3-1_all.deb ... 731s Unpacking r-cran-progress (1.2.3-1) ... 731s Selecting previously unselected package r-cran-httr2. 731s Preparing to unpack .../253-r-cran-httr2_1.1.1-1_all.deb ... 731s Unpacking r-cran-httr2 (1.1.1-1) ... 731s Selecting previously unselected package r-cran-digest. 731s Preparing to unpack .../254-r-cran-digest_0.6.37-1_arm64.deb ... 731s Unpacking r-cran-digest (0.6.37-1) ... 731s Selecting previously unselected package r-cran-xml2. 731s Preparing to unpack .../255-r-cran-xml2_1.3.7-1_arm64.deb ... 731s Unpacking r-cran-xml2 (1.3.7-1) ... 731s Selecting previously unselected package r-bioc-biomart. 731s Preparing to unpack .../256-r-bioc-biomart_2.62.1+dfsg-1_all.deb ... 731s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ... 731s Selecting previously unselected package r-bioc-sparsematrixstats. 731s Preparing to unpack .../257-r-bioc-sparsematrixstats_1.18.0+dfsg-2_arm64.deb ... 731s Unpacking r-bioc-sparsematrixstats (1.18.0+dfsg-2) ... 731s Selecting previously unselected package r-bioc-delayedmatrixstats. 731s Preparing to unpack .../258-r-bioc-delayedmatrixstats_1.28.1+ds-1_all.deb ... 731s Unpacking r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 731s Selecting previously unselected package r-bioc-summarizedexperiment. 731s Preparing to unpack .../259-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 731s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 731s Selecting previously unselected package r-cran-locfit. 731s Preparing to unpack .../260-r-cran-locfit_1.5-9.12-1_arm64.deb ... 731s Unpacking r-cran-locfit (1.5-9.12-1) ... 731s Selecting previously unselected package r-cran-gtable. 731s Preparing to unpack .../261-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 731s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 731s Selecting previously unselected package r-cran-isoband. 731s Preparing to unpack .../262-r-cran-isoband_0.2.7-1_arm64.deb ... 731s Unpacking r-cran-isoband (0.2.7-1) ... 731s Selecting previously unselected package r-cran-mass. 731s Preparing to unpack .../263-r-cran-mass_7.3-64-1_arm64.deb ... 731s Unpacking r-cran-mass (7.3-64-1) ... 731s Selecting previously unselected package r-cran-nlme. 731s Preparing to unpack .../264-r-cran-nlme_3.1.167-1_arm64.deb ... 731s Unpacking r-cran-nlme (3.1.167-1) ... 731s Selecting previously unselected package r-cran-mgcv. 731s Preparing to unpack .../265-r-cran-mgcv_1.9-1-1_arm64.deb ... 731s Unpacking r-cran-mgcv (1.9-1-1) ... 732s Selecting previously unselected package r-cran-farver. 732s Preparing to unpack .../266-r-cran-farver_2.1.2-1_arm64.deb ... 732s Unpacking r-cran-farver (2.1.2-1) ... 732s Selecting previously unselected package r-cran-labeling. 732s Preparing to unpack .../267-r-cran-labeling_0.4.3-1_all.deb ... 732s Unpacking r-cran-labeling (0.4.3-1) ... 732s Selecting previously unselected package r-cran-colorspace. 732s Preparing to unpack .../268-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 732s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 732s Selecting previously unselected package r-cran-munsell. 732s Preparing to unpack .../269-r-cran-munsell_0.5.1-1_all.deb ... 732s Unpacking r-cran-munsell (0.5.1-1) ... 732s Selecting previously unselected package r-cran-rcolorbrewer. 732s Preparing to unpack .../270-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 732s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 732s Selecting previously unselected package r-cran-viridislite. 732s Preparing to unpack .../271-r-cran-viridislite_0.4.2-2_all.deb ... 732s Unpacking r-cran-viridislite (0.4.2-2) ... 732s Selecting previously unselected package r-cran-scales. 732s Preparing to unpack .../272-r-cran-scales_1.3.0-1_all.deb ... 732s Unpacking r-cran-scales (1.3.0-1) ... 732s Selecting previously unselected package r-cran-ggplot2. 732s Preparing to unpack .../273-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 732s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 732s Selecting previously unselected package r-cran-rcpparmadillo. 732s Preparing to unpack .../274-r-cran-rcpparmadillo_14.2.3-1-1_arm64.deb ... 732s Unpacking r-cran-rcpparmadillo (14.2.3-1-1) ... 732s Selecting previously unselected package r-bioc-deseq2. 732s Preparing to unpack .../275-r-bioc-deseq2_1.46.0+dfsg-2_arm64.deb ... 732s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 732s Selecting previously unselected package r-cran-xml. 732s Preparing to unpack .../276-r-cran-xml_3.99-0.18-1_arm64.deb ... 732s Unpacking r-cran-xml (3.99-0.18-1) ... 732s Selecting previously unselected package r-cran-bitops. 732s Preparing to unpack .../277-r-cran-bitops_1.0-9-1_arm64.deb ... 732s Unpacking r-cran-bitops (1.0-9-1) ... 732s Selecting previously unselected package r-bioc-rhtslib. 732s Preparing to unpack .../278-r-bioc-rhtslib_3.2.0+dfsg-2_arm64.deb ... 732s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 732s Selecting previously unselected package r-bioc-rsamtools. 732s Preparing to unpack .../279-r-bioc-rsamtools_2.22.0+dfsg-2_arm64.deb ... 732s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 733s Selecting previously unselected package r-bioc-genomicalignments. 733s Preparing to unpack .../280-r-bioc-genomicalignments_1.42.0-2_arm64.deb ... 733s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 733s Selecting previously unselected package r-cran-rcurl. 733s Preparing to unpack .../281-r-cran-rcurl_1.98-1.16+dfsg-1_arm64.deb ... 733s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 733s Selecting previously unselected package r-cran-rjson. 733s Preparing to unpack .../282-r-cran-rjson_0.2.23-1_arm64.deb ... 733s Unpacking r-cran-rjson (0.2.23-1) ... 733s Selecting previously unselected package r-cran-restfulr. 733s Preparing to unpack .../283-r-cran-restfulr_0.0.15-1_arm64.deb ... 733s Unpacking r-cran-restfulr (0.0.15-1) ... 733s Selecting previously unselected package r-bioc-rtracklayer. 733s Preparing to unpack .../284-r-bioc-rtracklayer_1.66.0-2_arm64.deb ... 733s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 733s Selecting previously unselected package r-bioc-genomicfeatures. 733s Preparing to unpack .../285-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ... 733s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 733s Selecting previously unselected package r-bioc-protgenerics. 733s Preparing to unpack .../286-r-bioc-protgenerics_1.38.0-2_all.deb ... 733s Unpacking r-bioc-protgenerics (1.38.0-2) ... 733s Selecting previously unselected package r-bioc-ensembldb. 733s Preparing to unpack .../287-r-bioc-ensembldb_2.30.0+dfsg-3_all.deb ... 733s Unpacking r-bioc-ensembldb (2.30.0+dfsg-3) ... 733s Selecting previously unselected package r-bioc-rhdf5lib. 733s Preparing to unpack .../288-r-bioc-rhdf5lib_1.28.0+dfsg-2build1_arm64.deb ... 733s Unpacking r-bioc-rhdf5lib (1.28.0+dfsg-2build1) ... 733s Selecting previously unselected package r-bioc-rhdf5filters. 733s Preparing to unpack .../289-r-bioc-rhdf5filters_1.18.0+dfsg-2_arm64.deb ... 733s Unpacking r-bioc-rhdf5filters (1.18.0+dfsg-2) ... 733s Selecting previously unselected package r-bioc-rhdf5. 733s Preparing to unpack .../290-r-bioc-rhdf5_2.50.2+dfsg-1build1_arm64.deb ... 733s Unpacking r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 733s Selecting previously unselected package r-bioc-hdf5array. 733s Preparing to unpack .../291-r-bioc-hdf5array_1.34.0-2build1_arm64.deb ... 733s Unpacking r-bioc-hdf5array (1.34.0-2build1) ... 733s Selecting previously unselected package r-bioc-singlecellexperiment. 733s Preparing to unpack .../292-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ... 733s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ... 733s Selecting previously unselected package r-bioc-glmgampoi. 733s Preparing to unpack .../293-r-bioc-glmgampoi_1.18.0+dfsg-2_arm64.deb ... 733s Unpacking r-bioc-glmgampoi (1.18.0+dfsg-2) ... 733s Selecting previously unselected package r-bioc-txdbmaker. 733s Preparing to unpack .../294-r-bioc-txdbmaker_1.2.1+ds-2_all.deb ... 733s Unpacking r-bioc-txdbmaker (1.2.1+ds-2) ... 733s Selecting previously unselected package r-bioc-tximport. 733s Preparing to unpack .../295-r-bioc-tximport_1.34.0+dfsg-2_all.deb ... 733s Unpacking r-bioc-tximport (1.34.0+dfsg-2) ... 734s Selecting previously unselected package r-bioc-tximeta. 734s Preparing to unpack .../296-r-bioc-tximeta_1.24.0+dfsg-2_all.deb ... 734s Unpacking r-bioc-tximeta (1.24.0+dfsg-2) ... 734s Selecting previously unselected package r-bioc-tximportdata. 734s Preparing to unpack .../297-r-bioc-tximportdata_1.34.0+ds-2_all.deb ... 734s Unpacking r-bioc-tximportdata (1.34.0+ds-2) ... 734s Selecting previously unselected package r-cran-base64enc. 734s Preparing to unpack .../298-r-cran-base64enc_0.1-3-3_arm64.deb ... 734s Unpacking r-cran-base64enc (0.1-3-3) ... 734s Selecting previously unselected package r-cran-brio. 734s Preparing to unpack .../299-r-cran-brio_1.1.5-1_arm64.deb ... 734s Unpacking r-cran-brio (1.1.5-1) ... 734s Selecting previously unselected package r-cran-htmltools. 734s Preparing to unpack .../300-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 734s Unpacking r-cran-htmltools (0.5.8.1-1) ... 734s Selecting previously unselected package r-cran-jquerylib. 734s Preparing to unpack .../301-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 734s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 734s Selecting previously unselected package r-cran-fs. 734s Preparing to unpack .../302-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 734s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 734s Selecting previously unselected package r-cran-sass. 734s Preparing to unpack .../303-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 734s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 734s Selecting previously unselected package r-cran-bslib. 734s Preparing to unpack .../304-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 734s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 734s Selecting previously unselected package r-cran-ps. 734s Preparing to unpack .../305-r-cran-ps_1.9.0-1_arm64.deb ... 734s Unpacking r-cran-ps (1.9.0-1) ... 734s Selecting previously unselected package r-cran-processx. 734s Preparing to unpack .../306-r-cran-processx_3.8.6-1_arm64.deb ... 734s Unpacking r-cran-processx (3.8.6-1) ... 734s Selecting previously unselected package r-cran-callr. 734s Preparing to unpack .../307-r-cran-callr_3.7.6-1_all.deb ... 734s Unpacking r-cran-callr (3.7.6-1) ... 734s Selecting previously unselected package r-cran-clipr. 734s Preparing to unpack .../308-r-cran-clipr_0.8.0-1_all.deb ... 734s Unpacking r-cran-clipr (0.8.0-1) ... 734s Selecting previously unselected package r-cran-commonmark. 734s Preparing to unpack .../309-r-cran-commonmark_1.9.2-2_arm64.deb ... 734s Unpacking r-cran-commonmark (1.9.2-2) ... 734s Selecting previously unselected package r-cran-desc. 734s Preparing to unpack .../310-r-cran-desc_1.4.3-1_all.deb ... 734s Unpacking r-cran-desc (1.4.3-1) ... 734s Selecting previously unselected package r-cran-diffobj. 734s Preparing to unpack .../311-r-cran-diffobj_0.3.5-1_arm64.deb ... 734s Unpacking r-cran-diffobj (0.3.5-1) ... 735s Selecting previously unselected package r-cran-evaluate. 735s Preparing to unpack .../312-r-cran-evaluate_1.0.3-1_all.deb ... 735s Unpacking r-cran-evaluate (1.0.3-1) ... 735s Selecting previously unselected package r-cran-fontawesome. 735s Preparing to unpack .../313-r-cran-fontawesome_0.5.3-1_all.deb ... 735s Unpacking r-cran-fontawesome (0.5.3-1) ... 735s Selecting previously unselected package r-cran-xfun. 735s Preparing to unpack .../314-r-cran-xfun_0.51+dfsg-1_arm64.deb ... 735s Unpacking r-cran-xfun (0.51+dfsg-1) ... 735s Selecting previously unselected package r-cran-highr. 735s Preparing to unpack .../315-r-cran-highr_0.11+dfsg-1_all.deb ... 735s Unpacking r-cran-highr (0.11+dfsg-1) ... 735s Selecting previously unselected package r-cran-later. 735s Preparing to unpack .../316-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 735s Unpacking r-cran-later (1.4.1+dfsg-1) ... 735s Selecting previously unselected package r-cran-promises. 735s Preparing to unpack .../317-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 735s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 735s Selecting previously unselected package r-cran-httpuv. 735s Preparing to unpack .../318-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 735s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 735s Selecting previously unselected package libjs-mathjax. 735s Preparing to unpack .../319-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 735s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 736s Selecting previously unselected package r-cran-knitr. 736s Preparing to unpack .../320-r-cran-knitr_1.49+dfsg-1_all.deb ... 736s Unpacking r-cran-knitr (1.49+dfsg-1) ... 736s Selecting previously unselected package r-cran-pbapply. 736s Preparing to unpack .../321-r-cran-pbapply_1.7-2-1_all.deb ... 736s Unpacking r-cran-pbapply (1.7-2-1) ... 736s Selecting previously unselected package r-cran-pheatmap. 736s Preparing to unpack .../322-r-cran-pheatmap_1.0.12-2build1_all.deb ... 736s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 736s Selecting previously unselected package r-cran-pkgbuild. 736s Preparing to unpack .../323-r-cran-pkgbuild_1.4.6-1_all.deb ... 736s Unpacking r-cran-pkgbuild (1.4.6-1) ... 736s Selecting previously unselected package r-cran-rprojroot. 736s Preparing to unpack .../324-r-cran-rprojroot_2.0.4-2_all.deb ... 736s Unpacking r-cran-rprojroot (2.0.4-2) ... 736s Selecting previously unselected package r-cran-pkgload. 736s Preparing to unpack .../325-r-cran-pkgload_1.4.0-1_all.deb ... 736s Unpacking r-cran-pkgload (1.4.0-1) ... 736s Selecting previously unselected package r-cran-praise. 736s Preparing to unpack .../326-r-cran-praise_1.0.0-4build1_all.deb ... 736s Unpacking r-cran-praise (1.0.0-4build1) ... 736s Selecting previously unselected package r-cran-tzdb. 736s Preparing to unpack .../327-r-cran-tzdb_0.4.0-2_arm64.deb ... 736s Unpacking r-cran-tzdb (0.4.0-2) ... 736s Selecting previously unselected package r-cran-vroom. 736s Preparing to unpack .../328-r-cran-vroom_1.6.5-1_arm64.deb ... 736s Unpacking r-cran-vroom (1.6.5-1) ... 736s Selecting previously unselected package r-cran-readr. 736s Preparing to unpack .../329-r-cran-readr_2.1.5-1_arm64.deb ... 736s Unpacking r-cran-readr (2.1.5-1) ... 736s Selecting previously unselected package r-cran-tinytex. 736s Preparing to unpack .../330-r-cran-tinytex_0.56-1_all.deb ... 736s Unpacking r-cran-tinytex (0.56-1) ... 736s Selecting previously unselected package libjs-modernizr. 736s Preparing to unpack .../331-libjs-modernizr_3.13.0-0.1_all.deb ... 736s Unpacking libjs-modernizr (3.13.0-0.1) ... 736s Selecting previously unselected package r-cran-xtable. 736s Preparing to unpack .../332-r-cran-xtable_1%3a1.8-4-2_all.deb ... 736s Unpacking r-cran-xtable (1:1.8-4-2) ... 736s Selecting previously unselected package r-cran-sourcetools. 736s Preparing to unpack .../333-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 736s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 736s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 736s Preparing to unpack .../334-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 736s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 736s Selecting previously unselected package r-cran-shiny. 736s Preparing to unpack .../335-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 736s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 737s Selecting previously unselected package r-cran-rmarkdown. 737s Preparing to unpack .../336-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 737s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 737s Selecting previously unselected package r-cran-waldo. 737s Preparing to unpack .../337-r-cran-waldo_0.6.1-2_all.deb ... 737s Unpacking r-cran-waldo (0.6.1-2) ... 737s Selecting previously unselected package r-cran-testthat. 737s Preparing to unpack .../338-r-cran-testthat_3.2.3-1_arm64.deb ... 737s Unpacking r-cran-testthat (3.2.3-1) ... 737s Setting up libjs-json (0~20221030+~1.0.8-1) ... 737s Setting up javascript-common (12) ... 737s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 737s Setting up libgnutls-openssl27t64:arm64 (3.8.9-2ubuntu2) ... 737s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 737s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 737s Setting up libncurses-dev:arm64 (6.5+20250216-2) ... 737s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 737s Setting up libzstd-dev:arm64 (1.5.6+dfsg-2) ... 737s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 737s Setting up hdf5-helpers (1.14.5+repack-3) ... 737s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 737s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 737s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 737s Setting up libjs-popper.js (1.16.1+ds-6) ... 737s Setting up libxcb-render0:arm64 (1.17.0-2) ... 737s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 737s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 737s Setting up unzip (6.0-28ubuntu6) ... 737s Setting up x11-common (1:7.7+23ubuntu3) ... 737s Setting up node-html5shiv (3.7.3+dfsg-5) ... 737s Setting up libdeflate0:arm64 (1.23-1) ... 737s Setting up libevent-2.1-7t64:arm64 (2.1.12-stable-10) ... 737s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 737s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 737s Setting up libreadline-dev:arm64 (8.2-6) ... 737s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ... 737s Setting up libjs-modernizr (3.13.0-0.1) ... 737s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 737s Setting up libpcre2-16-0:arm64 (10.45-1) ... 737s Setting up libaec0:arm64 (1.1.3-1) ... 737s Setting up libpsl-dev:arm64 (0.21.2-1.1build1) ... 737s Setting up libsnappy1v5:arm64 (1.2.1-1) ... 737s Setting up libjs-es5-shim (4.6.7-2) ... 737s Setting up zip (3.0-14ubuntu2) ... 737s Setting up libpcre2-32-0:arm64 (10.45-1) ... 737s Setting up libblas3:arm64 (3.12.1-2) ... 737s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 737s Setting up libunbound8:arm64 (1.22.0-1ubuntu1) ... 737s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 737s Setting up libpkgconf3:arm64 (1.8.1-4) ... 737s Setting up libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-3ubuntu1) ... 737s Setting up libgnutls-dane0t64:arm64 (3.8.9-2ubuntu2) ... 737s Setting up libgssrpc4t64:arm64 (1.21.3-4ubuntu2) ... 737s Setting up libldap-dev:arm64 (2.6.9+dfsg-1~exp2ubuntu1) ... 737s Setting up comerr-dev:arm64 (2.1-1.47.2-1ubuntu1) ... 737s Setting up libjs-d3 (3.5.17-4) ... 737s Setting up fonts-dejavu-mono (2.37-8) ... 737s Setting up libssl-dev:arm64 (3.4.1-1ubuntu1) ... 737s 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737s Setting up libcc1-0:arm64 (15-20250222-0ubuntu1) ... 737s Setting up libbrotli-dev:arm64 (1.1.0-2build4) ... 737s Setting up liblsan0:arm64 (15-20250222-0ubuntu1) ... 737s Setting up libp11-kit-dev:arm64 (0.25.5-2ubuntu3) ... 737s Setting up libblas-dev:arm64 (3.12.1-2) ... 737s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 737s Setting up libsz2:arm64 (1.1.3-1) ... 737s Setting up dctrl-tools (2.24-3build3) ... 737s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 737s Setting up libitm1:arm64 (15-20250222-0ubuntu1) ... 737s Setting up libkadm5clnt-mit12:arm64 (1.21.3-4ubuntu2) ... 737s Setting up libbz2-dev:arm64 (1.0.8-6) ... 737s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 737s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 737s Setting up libice6:arm64 (2:1.1.1-1) ... 737s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 737s Setting up liblapack3:arm64 (3.12.1-2) ... 737s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 737s Setting up libgmp-dev:arm64 (2:6.3.0+dfsg-3ubuntu1) ... 737s Setting up libpcre2-dev:arm64 (10.45-1) ... 737s Setting up nettle-dev:arm64 (3.10.1-1) ... 737s Setting up libkdb5-10t64:arm64 (1.21.3-4ubuntu2) ... 737s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 738s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 738s Setting up libpng-dev:arm64 (1.6.47-1) ... 738s Setting up libaec-dev:arm64 (1.1.3-1) ... 738s Setting up libpaper-utils (2.2.5-0.3) ... 738s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 738s Setting up pkgconf:arm64 (1.8.1-4) ... 738s Setting up libthai0:arm64 (0.1.29-2build1) ... 738s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 738s Setting up pandoc (3.1.11.1+ds-2) ... 738s Setting up liblapack-dev:arm64 (3.12.1-2) ... 738s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 738s Setting up libssh2-1-dev:arm64 (1.11.1-1) ... 738s Setting up libhdf5-310:arm64 (1.14.5+repack-3) ... 738s Setting up cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 738s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 738s Setting up libkadm5srv-mit12:arm64 (1.21.3-4ubuntu2) ... 738s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 738s Setting up libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 738s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 738s Setting up libhdf5-fortran-310:arm64 (1.14.5+repack-3) ... 738s Setting up libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 738s Setting up libsm6:arm64 (2:1.2.4-1) ... 738s Setting up krb5-multidev:arm64 (1.21.3-4ubuntu2) ... 738s Setting up libhdf5-cpp-310:arm64 (1.14.5+repack-3) ... 738s Setting up libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 738s Setting up libgnutls28-dev:arm64 (3.8.9-2ubuntu2) ... 738s Setting up libnghttp2-dev:arm64 (1.64.0-1) ... 738s Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 738s Setting up fontconfig (2.15.0-2ubuntu1) ... 740s Regenerating fonts cache... done. 740s Setting up libxft2:arm64 (2.3.6-1build1) ... 740s Setting up libboost1.83-dev:arm64 (1.83.0-4.1ubuntu2) ... 740s Setting up libtk8.6:arm64 (8.6.16-1) ... 740s Setting up libpango-1.0-0:arm64 (1.56.2-1) ... 740s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 740s Setting up libcairo2:arm64 (1.18.2-2) ... 740s Setting up libkrb5-dev:arm64 (1.21.3-4ubuntu2) ... 740s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 740s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 740s Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2build7) ... 740s Setting up cpp-14 (14.2.0-17ubuntu3) ... 740s Setting up cpp (4:14.2.0-1ubuntu1) ... 740s Setting up libboost-dev:arm64 (1.83.0.2ubuntu1) ... 740s Setting up gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 740s Setting up libpangoft2-1.0-0:arm64 (1.56.2-1) ... 740s Setting up libpangocairo-1.0-0:arm64 (1.56.2-1) ... 740s Setting up libhdf5-hl-cpp-310:arm64 (1.14.5+repack-3) ... 740s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 740s Setting up libhdf5-hl-fortran-310:arm64 (1.14.5+repack-3) ... 740s Setting up g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 740s Setting up gcc-14 (14.2.0-17ubuntu3) ... 740s Setting up libcurl4-openssl-dev:arm64 (8.12.1-3ubuntu1) ... 740s Setting up r-base-core (4.4.3-1) ... 740s Creating config file /etc/R/Renviron with new version 740s Setting up r-cran-crayon (1.5.3-1) ... 740s Setting up libhdf5-dev (1.14.5+repack-3) ... 740s update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 740s Setting up r-cran-labeling (0.4.3-1) ... 740s Setting up r-cran-sourcetools (0.1.7-1-1) ... 740s Setting up r-cran-futile.options (1.0.1-3build1) ... 740s Setting up r-cran-lattice (0.22-6-1) ... 740s Setting up r-cran-ps (1.9.0-1) ... 740s Setting up r-cran-nlme (3.1.167-1) ... 740s Setting up r-cran-farver (2.1.2-1) ... 740s Setting up r-cran-formatr (1.14-2) ... 740s Setting up r-cran-pbapply (1.7-2-1) ... 740s Setting up r-cran-xml (3.99-0.18-1) ... 740s Setting up r-cran-viridislite (0.4.2-2) ... 740s Setting up r-cran-locfit (1.5-9.12-1) ... 740s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 740s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 740s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 740s Setting up r-cran-lazyeval (0.2.2-1build1) ... 740s Setting up r-cran-clipr (0.8.0-1) ... 740s Setting up r-cran-commonmark (1.9.2-2) ... 740s Setting up g++-14 (14.2.0-17ubuntu3) ... 740s Setting up r-cran-rjson (0.2.23-1) ... 740s Setting up r-cran-r6 (2.6.1-1) ... 740s Setting up r-cran-pkgkitten (0.2.4-1) ... 740s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 740s Setting up r-cran-magrittr (2.0.3-1) ... 740s Setting up r-cran-rappdirs (0.3.3-1) ... 740s Setting up r-cran-filelock (1.0.3-1) ... 740s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 740s Setting up r-cran-littler (0.3.20-2) ... 740s Setting up r-cran-bh (1.84.0-1) ... 740s Setting up r-cran-fs (1.6.5+dfsg-1) ... 740s Setting up r-cran-rcpp (1.0.14-1) ... 740s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 740s Setting up r-cran-codetools (0.2-20-1) ... 740s Setting up r-cran-brio (1.1.5-1) ... 740s Setting up r-cran-diffobj (0.3.5-1) ... 740s Setting up r-bioc-biocgenerics (0.52.0-2) ... 740s Setting up r-cran-rlang (1.1.5-1) ... 740s Setting up r-cran-matrixstats (1.5.0-1) ... 740s Setting up littler (0.3.20-2) ... 740s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 740s Setting up r-cran-xfun (0.51+dfsg-1) ... 740s Setting up r-cran-sys (3.4.3-1) ... 740s Setting up r-bioc-tximportdata (1.34.0+ds-2) ... 740s Setting up r-cran-plogr (0.2.0-3build1) ... 740s Setting up r-cran-withr (3.0.2+dfsg-1) ... 740s Setting up r-cran-processx (3.8.6-1) ... 740s Setting up r-cran-mime (0.12-2) ... 740s Setting up r-cran-praise (1.0.0-4build1) ... 740s Setting up r-cran-generics (0.1.3-1) ... 740s Setting up r-cran-base64enc (0.1-3-3) ... 740s Setting up r-cran-abind (1.4-8-1) ... 740s Setting up r-cran-digest (0.6.37-1) ... 740s Setting up r-cran-yaml (2.3.10-1) ... 740s Setting up r-cran-lambda.r (1.2.4-2build1) ... 740s Setting up r-bioc-protgenerics (1.38.0-2) ... 740s Setting up r-cran-evaluate (1.0.3-1) ... 740s Setting up r-cran-dbi (1.2.3-1) ... 740s Setting up r-cran-highr (0.11+dfsg-1) ... 740s Setting up r-cran-prettyunits (1.2.0-1) ... 740s Setting up r-cran-fansi (1.0.5-1) ... 740s Setting up r-bioc-rhdf5lib (1.28.0+dfsg-2build1) ... 740s Setting up r-cran-mass (7.3-64-1) ... 740s Setting up r-cran-snow (1:0.4.4-2) ... 740s Setting up r-cran-glue (1.8.0-1) ... 740s Setting up r-bioc-rhdf5filters (1.18.0+dfsg-2) ... 740s Setting up r-cran-bit (4.6.0+dfsg-1) ... 740s Setting up r-cran-xtable (1:1.8-4-2) ... 740s Setting up r-cran-cli (3.6.4-1) ... 740s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 740s Setting up r-cran-bitops (1.0-9-1) ... 740s Setting up r-bioc-biocversion (3.20.0-2) ... 740s Setting up r-cran-rprojroot (2.0.4-2) ... 740s Setting up r-cran-bit64 (4.6.0-1-1ubuntu2) ... 740s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... 740s Setting up gcc (4:14.2.0-1ubuntu1) ... 740s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 740s Setting up r-cran-askpass (1.2.1-1) ... 740s Setting up r-cran-fastmap (1.2.0-1) ... 740s Setting up r-cran-png (0.1-8-1build2) ... 740s Setting up r-bioc-biobase (2.66.0-2) ... 740s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 740s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 740s Setting up r-cran-utf8 (1.2.4-1) ... 740s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 740s Setting up r-cran-stringi (1.8.4-1build1) ... 740s Setting up r-cran-cpp11 (0.5.2-1) ... 740s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 740s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 740s Setting up r-cran-isoband (0.2.7-1) ... 740s Setting up r-cran-futile.logger (1.4.3-4build1) ... 740s Setting up r-cran-waldo (0.6.1-2) ... 740s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 740s Setting up r-cran-later (1.4.1+dfsg-1) ... 740s Setting up r-cran-matrix (1.7-3-1) ... 740s Setting up r-cran-htmltools (0.5.8.1-1) ... 740s Setting up r-cran-tinytex (0.56-1) ... 740s Setting up r-bioc-tximport (1.34.0+dfsg-2) ... 740s Setting up r-cran-knitr (1.49+dfsg-1) ... 740s Setting up r-cran-mgcv (1.9-1-1) ... 740s Setting up g++ (4:14.2.0-1ubuntu1) ... 740s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 740s Setting up r-cran-cachem (1.1.0-1) ... 740s Setting up r-cran-sass (0.4.9+dfsg-1) ... 740s Setting up build-essential (12.10ubuntu1) ... 740s Setting up r-cran-rcpparmadillo (14.2.3-1-1) ... 740s Setting up r-bioc-iranges (2.40.1-2) ... 740s Setting up r-bioc-assorthead (1.0.1+ds-2) ... 740s Setting up r-cran-tzdb (0.4.0-2) ... 740s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 740s Setting up r-cran-restfulr (0.0.15-1) ... 740s Setting up r-bioc-sparsematrixstats (1.18.0+dfsg-2) ... 740s Setting up r-cran-vctrs (0.6.5-1) ... 740s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 740s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 740s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 740s Setting up r-cran-stringr (1.5.1-1) ... 740s Setting up r-bioc-biocparallel (1.40.0-2) ... 740s Setting up r-cran-callr (3.7.6-1) ... 740s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 740s Setting up r-cran-desc (1.4.3-1) ... 740s Setting up r-cran-xml2 (1.3.7-1) ... 740s Setting up r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 740s Setting up r-cran-munsell (0.5.1-1) ... 740s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 740s Setting up r-cran-fontawesome (0.5.3-1) ... 740s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 740s Setting up gfortran (4:14.2.0-1ubuntu1) ... 740s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 740s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 740s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 740s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 740s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 740s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 740s Setting up r-cran-httr2 (1.1.1-1) ... 740s Setting up r-cran-httr (1.4.7+dfsg-1) ... 740s Setting up r-cran-hms (1.1.3-1) ... 740s Setting up r-cran-scales (1.3.0-1) ... 740s Setting up r-cran-memoise (2.0.1-1) ... 740s Setting up r-cran-promises (1.3.2+dfsg-1) ... 740s Setting up r-cran-purrr (1.0.4-1) ... 740s Setting up r-cran-blob (1.2.4-1) ... 740s Setting up r-bioc-xvector (0.46.0-2) ... 740s Setting up r-cran-pkgbuild (1.4.6-1) ... 740s Setting up r-cran-dplyr (1.1.4-4) ... 740s Setting up r-cran-rsqlite (2.3.9-1) ... 740s Setting up r-cran-progress (1.2.3-1) ... 740s Setting up r-cran-pheatmap (1.0.12-2build1) ... 740s Setting up r-cran-pkgload (1.4.0-1) ... 740s Setting up r-cran-vroom (1.6.5-1) ... 740s Setting up r-base-dev (4.4.3-1) ... 740s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 740s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 740s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 740s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 740s Setting up r-cran-testthat (3.2.3-1) ... 740s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 740s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 740s Setting up r-cran-readr (2.1.5-1) ... 740s Setting up r-cran-tidyr (1.3.1-1) ... 740s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 740s Setting up r-cran-dbplyr (2.5.0+dfsg-1) ... 740s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 740s Setting up r-bioc-hdf5array (1.34.0-2build1) ... 740s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... 740s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 740s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 740s Setting up r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 740s Setting up r-bioc-annotationfilter (1.30.0+dfsg-2) ... 740s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 740s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 740s Setting up r-bioc-beachmat (2.22.0+ds-2) ... 740s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 740s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 740s Setting up r-bioc-keggrest (1.46.0+dfsg-2) ... 740s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... 740s Setting up r-bioc-annotationdbi (1.68.0-2) ... 740s Setting up r-bioc-annotationhub (3.14.0+dfsg-2) ... 740s Setting up r-bioc-biomart (2.62.1+dfsg-1) ... 740s Setting up r-bioc-genomicalignments (1.42.0-2) ... 740s Setting up r-bioc-rtracklayer (1.66.0-2) ... 740s Setting up r-bioc-singlecellexperiment (1.28.1+ds-2) ... 740s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 740s Setting up r-bioc-glmgampoi (1.18.0+dfsg-2) ... 740s Setting up r-bioc-txdbmaker (1.2.1+ds-2) ... 740s Setting up r-bioc-ensembldb (2.30.0+dfsg-3) ... 740s Setting up r-bioc-tximeta (1.24.0+dfsg-2) ... 740s Processing triggers for man-db (2.13.0-1) ... 742s Processing triggers for install-info (7.1.1-1) ... 742s Processing triggers for libc-bin (2.41-1ubuntu2) ... 744s autopkgtest [15:50:38]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 744s autopkgtest [15:50:38]: test pkg-r-autopkgtest: [----------------------- 744s Test: Try to load the R library DESeq2 744s 744s R version 4.4.3 (2025-02-28) -- "Trophy Case" 744s Copyright (C) 2025 The R Foundation for Statistical Computing 744s Platform: aarch64-unknown-linux-gnu 744s 744s R is free software and comes with ABSOLUTELY NO WARRANTY. 744s You are welcome to redistribute it under certain conditions. 744s Type 'license()' or 'licence()' for distribution details. 744s 744s R is a collaborative project with many contributors. 744s Type 'contributors()' for more information and 744s 'citation()' on how to cite R or R packages in publications. 744s 744s Type 'demo()' for some demos, 'help()' for on-line help, or 744s 'help.start()' for an HTML browser interface to help. 744s Type 'q()' to quit R. 744s 744s > library('DESeq2') 744s Loading required package: S4Vectors 744s Loading required package: stats4 744s Loading required package: BiocGenerics 744s 744s Attaching package: ‘BiocGenerics’ 744s 744s The following objects are masked from ‘package:stats’: 744s 744s IQR, mad, sd, var, xtabs 744s 744s The following objects are masked from ‘package:base’: 744s 744s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 744s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 744s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 744s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 744s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 744s table, tapply, union, unique, unsplit, which.max, which.min 744s 745s 745s Attaching package: ‘S4Vectors’ 745s 745s The following object is masked from ‘package:utils’: 745s 745s findMatches 745s 745s The following objects are masked from ‘package:base’: 745s 745s expand.grid, I, unname 745s 745s Loading required package: IRanges 746s Loading required package: GenomicRanges 746s Loading required package: GenomeInfoDb 746s Loading required package: SummarizedExperiment 746s Loading required package: MatrixGenerics 746s Loading required package: matrixStats 747s 747s Attaching package: ‘MatrixGenerics’ 747s 747s The following objects are masked from ‘package:matrixStats’: 747s 747s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 747s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 747s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 747s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 747s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 747s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 747s colWeightedMeans, colWeightedMedians, colWeightedSds, 747s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 747s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 747s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 747s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 747s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 747s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 747s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 747s rowWeightedSds, rowWeightedVars 747s 747s Loading required package: Biobase 747s Welcome to Bioconductor 747s 747s Vignettes contain introductory material; view with 747s 'browseVignettes()'. To cite Bioconductor, see 747s 'citation("Biobase")', and for packages 'citation("pkgname")'. 747s 747s 747s Attaching package: ‘Biobase’ 747s 747s The following object is masked from ‘package:MatrixGenerics’: 747s 747s rowMedians 747s 747s The following objects are masked from ‘package:matrixStats’: 747s 747s anyMissing, rowMedians 747s 751s > 751s > 751s Other tests are currently unsupported! 751s They will be progressively added. 751s autopkgtest [15:50:45]: test pkg-r-autopkgtest: -----------------------] 752s autopkgtest [15:50:46]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 752s pkg-r-autopkgtest PASS 753s autopkgtest [15:50:47]: @@@@@@@@@@@@@@@@@@@@ summary 753s pkg-r-autopkgtest PASS 785s nova [W] Using flock in prodstack6-arm64 785s Creating nova instance adt-plucky-arm64-r-bioc-deseq2-20250315-150535-juju-7f2275-prod-proposed-migration-environment-20-4fc86fa0-b5ca-41d5-b9ef-51225c20e640 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 785s nova [W] Timed out waiting for 6d85e8ec-051e-43df-af88-cc890c268965 to get deleted.