0s autopkgtest [15:04:41]: starting date and time: 2025-03-15 15:04:41+0000 0s autopkgtest [15:04:41]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:04:41]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.1ggk6bie/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-bsseq --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-22.secgroup --name adt-plucky-arm64-r-bioc-bsseq-20250315-150441-juju-7f2275-prod-proposed-migration-environment-2-7d90f037-cb03-491d-afd2-043b325eafec --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 177s autopkgtest [15:07:38]: testbed dpkg architecture: arm64 177s autopkgtest [15:07:38]: testbed apt version: 2.9.33 177s autopkgtest [15:07:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup 178s autopkgtest [15:07:39]: testbed release detected to be: None 179s autopkgtest [15:07:40]: updating testbed package index (apt update) 179s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 179s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 179s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 179s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 180s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 180s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 180s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 180s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [78.2 kB] 180s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1976 B] 180s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 180s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [346 kB] 181s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [15.8 kB] 181s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B] 181s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [572 B] 181s Fetched 1094 kB in 2s (553 kB/s) 182s Reading package lists... 183s Reading package lists... 183s Building dependency tree... 183s Reading state information... 184s Calculating upgrade... 184s Calculating upgrade... 184s The following packages will be upgraded: 184s python3-jinja2 strace 184s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 184s Need to get 608 kB of archives. 184s After this operation, 11.3 kB of additional disk space will be used. 184s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 185s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 186s Fetched 608 kB in 1s (548 kB/s) 186s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 186s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 186s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 186s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 186s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 186s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 187s Setting up strace (6.13+ds-1ubuntu1) ... 187s Processing triggers for man-db (2.13.0-1) ... 188s Reading package lists... 188s Building dependency tree... 188s Reading state information... 188s Solving dependencies... 189s The following packages will be REMOVED: 189s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 189s libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 189s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 189s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* 189s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded. 189s After this operation, 267 MB disk space will be freed. 189s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 189s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 189s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 189s Removing libpython3.12t64:arm64 (3.12.9-1) ... 189s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ... 189s Removing libnsl2:arm64 (1.3.0-3build3) ... 189s Removing libpython3.12-minimal:arm64 (3.12.9-1) ... 189s Removing libunwind8:arm64 (1.6.2-3.1) ... 189s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 190s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 192s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 192s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 192s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 192s /etc/kernel/postrm.d/initramfs-tools: 192s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 192s /etc/kernel/postrm.d/zz-flash-kernel: 192s flash-kernel: Kernel 6.11.0-8-generic has been removed. 192s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required. 193s /etc/kernel/postrm.d/zz-update-grub: 193s Sourcing file `/etc/default/grub' 193s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 193s Generating grub configuration file ... 193s Found linux image: /boot/vmlinuz-6.14.0-10-generic 193s Found initrd image: /boot/initrd.img-6.14.0-10-generic 193s Warning: os-prober will not be executed to detect other bootable partitions. 193s Systems on them will not be added to the GRUB boot configuration. 193s Check GRUB_DISABLE_OS_PROBER documentation entry. 193s Adding boot menu entry for UEFI Firmware Settings ... 193s done 193s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 194s Processing triggers for libc-bin (2.41-1ubuntu1) ... 194s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81650 files and directories currently installed.) 194s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 194s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ... 194s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 194s autopkgtest [15:07:55]: upgrading testbed (apt dist-upgrade and autopurge) 194s Reading package lists... 195s Building dependency tree... 195s Reading state information... 195s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 195s Starting 2 pkgProblemResolver with broken count: 0 195s Done 196s Entering ResolveByKeep 197s 197s Calculating upgrade... 197s The following packages will be upgraded: 197s libc-bin libc-dev-bin libc6 libc6-dev locales 197s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 197s Need to get 9530 kB of archives. 197s After this operation, 0 B of additional disk space will be used. 197s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB] 199s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB] 199s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB] 202s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB] 203s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB] 208s Preconfiguring packages ... 208s Fetched 9530 kB in 10s (952 kB/s) 208s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 208s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ... 208s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 208s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ... 208s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 208s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ... 208s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 209s Setting up libc6:arm64 (2.41-1ubuntu2) ... 209s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 209s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ... 209s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 209s Setting up libc-bin (2.41-1ubuntu2) ... 209s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 209s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 209s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 209s Setting up locales (2.41-1ubuntu2) ... 210s Generating locales (this might take a while)... 212s en_US.UTF-8... done 212s Generation complete. 212s Setting up libc-dev-bin (2.41-1ubuntu2) ... 212s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ... 212s Processing triggers for man-db (2.13.0-1) ... 213s Processing triggers for systemd (257.3-1ubuntu3) ... 214s Reading package lists... 215s Building dependency tree... 215s Reading state information... 215s Starting pkgProblemResolver with broken count: 0 215s Starting 2 pkgProblemResolver with broken count: 0 215s Done 216s Solving dependencies... 216s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 216s autopkgtest [15:08:17]: rebooting testbed after setup commands that affected boot 240s autopkgtest [15:08:41]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 242s autopkgtest [15:08:43]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-bsseq 247s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-bsseq 1.42.0+dfsg-2 (dsc) [2530 B] 247s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-bsseq 1.42.0+dfsg-2 (tar) [2231 kB] 247s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-bsseq 1.42.0+dfsg-2 (diff) [5832 B] 247s gpgv: Signature made Mon Jan 13 22:20:12 2025 UTC 247s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 247s gpgv: issuer "crusoe@debian.org" 247s gpgv: Can't check signature: No public key 247s dpkg-source: warning: cannot verify inline signature for ./r-bioc-bsseq_1.42.0+dfsg-2.dsc: no acceptable signature found 247s autopkgtest [15:08:48]: testing package r-bioc-bsseq version 1.42.0+dfsg-2 247s autopkgtest [15:08:48]: build not needed 249s autopkgtest [15:08:50]: test pkg-r-autopkgtest: preparing testbed 249s Reading package lists... 250s Building dependency tree... 250s Reading state information... 250s Starting pkgProblemResolver with broken count: 0 250s Starting 2 pkgProblemResolver with broken count: 0 250s Done 251s The following NEW packages will be installed: 251s build-essential comerr-dev cpp cpp-14 cpp-14-aarch64-linux-gnu 251s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 251s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 251s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-14 251s g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 251s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 251s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu hdf5-helpers 251s icu-devtools javascript-common krb5-multidev libaec-dev libaec0 libasan8 251s libbibtex-parser-perl libblas-dev libblas3 libblosc1 libboost-dev 251s libboost1.83-dev libbrotli-dev libbz2-dev libcairo2 libcc1-0 251s libcurl4-openssl-dev libdatrie1 libdeflate-dev libdeflate0 libevent-2.1-7t64 251s libfontconfig1 libgcc-14-dev libgfortran-14-dev libgfortran5 libgmp-dev 251s libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 libgnutls28-dev 251s libgomp1 libgraphite2-3 libgssrpc4t64 libharfbuzz0b libhdf5-310 251s libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310 251s libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libhnswlib-dev libhwasan0 libice6 251s libicu-dev libidn2-dev libio-string-perl libisl23 libitm1 libjbig0 251s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 251s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 251s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 251s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 251s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 251s libjs-twitter-bootstrap-datepicker libkadm5clnt-mit12 libkadm5srv-mit12 251s libkdb5-10t64 libkpathsea6 libkrb5-dev liblapack-dev liblapack3 251s liblatex-tounicode-perl libldap-dev liblerc4 liblsan0 liblua5.4-0 251s liblzma-dev libmpc3 libmpfi0 libncurses-dev libnghttp2-dev libp11-kit-dev 251s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 251s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 251s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl-dev libptexenc1 251s libreadline-dev librtmp-dev libsharpyuv0 libsm6 libsnappy1v5 libssh2-1-dev 251s libssl-dev libstdc++-14-dev libsynctex2 libsz2 libtasn1-6-dev libtcl8.6 251s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 251s libtk8.6 libtsan2 libubsan1 libunbound8 libwebp7 libxaw7 libxcb-render0 251s libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 251s libzstd-dev libzzip-0-13t64 littler nettle-dev node-bootstrap-sass 251s node-html5shiv node-normalize.css pandoc pandoc-data pkg-r-autopkgtest 251s pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-assorthead r-bioc-beachmat 251s r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 251s r-bioc-biocstyle r-bioc-biocversion r-bioc-biostrings r-bioc-bsgenome 251s r-bioc-bsseq r-bioc-delayedarray r-bioc-delayedmatrixstats 251s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 251s r-bioc-genomicranges r-bioc-hdf5array r-bioc-iranges r-bioc-limma 251s r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib 251s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 251s r-bioc-s4vectors r-bioc-sparsearray r-bioc-sparsematrixstats 251s r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 251s r-cran-abind r-cran-askpass r-cran-backports r-cran-base64enc 251s r-cran-base64url r-cran-batchtools r-cran-bh r-cran-biocmanager 251s r-cran-bitops r-cran-bookdown r-cran-brew r-cran-brio r-cran-bslib 251s r-cran-cachem r-cran-callr r-cran-checkmate r-cran-cli r-cran-codetools 251s r-cran-colorspace r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl 251s r-cran-data.table r-cran-desc r-cran-diffobj r-cran-digest r-cran-doparallel 251s r-cran-evaluate r-cran-farver r-cran-fastmap r-cran-fontawesome 251s r-cran-foreach r-cran-formatr r-cran-fs r-cran-futile.logger 251s r-cran-futile.options r-cran-glue r-cran-gtools r-cran-highr r-cran-hms 251s r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-iterators r-cran-jquerylib 251s r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 251s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-locfit r-cran-magrittr 251s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-munsell 251s r-cran-openssl r-cran-permute r-cran-pkgbuild r-cran-pkgconfig 251s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-prettyunits 251s r-cran-processx r-cran-progress r-cran-promises r-cran-ps r-cran-r.methodss3 251s r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer 251s r-cran-rcpp r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang 251s r-cran-rmarkdown r-cran-rprojroot r-cran-sass r-cran-scales r-cran-shiny 251s r-cran-snow r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-sys 251s r-cran-testthat r-cran-tinytex r-cran-vctrs r-cran-viridislite r-cran-waldo 251s r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml t1utils 251s tex-common texlive-base texlive-bibtex-extra texlive-binaries 251s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 251s 0 upgraded, 331 newly installed, 0 to remove and 0 not upgraded. 251s Need to get 454 MB of archives. 251s After this operation, 1427 MB of additional disk space will be used. 251s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 252s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 252s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [10.6 MB] 263s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-17ubuntu3 [1028 B] 263s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 263s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 263s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 15-20250222-0ubuntu1 [44.2 kB] 263s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 263s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 15-20250222-0ubuntu1 [28.0 kB] 263s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 15-20250222-0ubuntu1 [2924 kB] 266s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 15-20250222-0ubuntu1 [1319 kB] 268s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 15-20250222-0ubuntu1 [2694 kB] 270s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 15-20250222-0ubuntu1 [1178 kB] 272s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 15-20250222-0ubuntu1 [1642 kB] 273s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-17ubuntu3 [2593 kB] 276s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [20.9 MB] 298s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-17ubuntu3 [526 kB] 298s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 298s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 298s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-17ubuntu3 [2499 kB] 301s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [12.1 MB] 314s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-17ubuntu3 [21.8 kB] 314s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 314s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 314s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 314s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 314s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 315s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 315s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 315s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 316s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 316s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 316s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 316s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 322s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 325s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 325s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran-14-dev arm64 14.2.0-17ubuntu3 [498 kB] 326s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-17ubuntu3 [11.4 MB] 338s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-14 arm64 14.2.0-17ubuntu3 [13.6 kB] 338s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 338s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 338s Get:42 http://ftpmaster.internal/ubuntu plucky/universe arm64 hdf5-helpers arm64 1.14.5+repack-3 [17.0 kB] 338s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 338s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 12 [5216 B] 338s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 comerr-dev arm64 2.1-1.47.2-1ubuntu1 [45.1 kB] 338s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libgssrpc4t64 arm64 1.21.3-4ubuntu2 [58.5 kB] 338s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libkadm5clnt-mit12 arm64 1.21.3-4ubuntu2 [40.3 kB] 338s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libkdb5-10t64 arm64 1.21.3-4ubuntu2 [40.9 kB] 338s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libkadm5srv-mit12 arm64 1.21.3-4ubuntu2 [53.8 kB] 338s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 krb5-multidev arm64 1.21.3-4ubuntu2 [125 kB] 338s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 338s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 338s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] 338s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 338s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 339s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 339s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 339s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 libblosc1 arm64 1.21.5+ds-1build1 [25.7 kB] 339s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost1.83-dev arm64 1.83.0-4.1ubuntu2 [10.7 MB] 350s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost-dev arm64 1.83.0.2ubuntu1 [4468 B] 350s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libbrotli-dev arm64 1.1.0-2build4 [359 kB] 350s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 350s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 350s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 350s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 350s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 350s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 351s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libidn2-dev arm64 2.3.7-2build2 [120 kB] 351s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libkrb5-dev arm64 1.21.3-4ubuntu2 [11.9 kB] 351s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libldap-dev arm64 2.6.9+dfsg-1~exp2ubuntu1 [318 kB] 352s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 352s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 352s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 352s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libnghttp2-dev arm64 1.64.0-1 [120 kB] 352s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libpsl-dev arm64 0.21.2-1.1build1 [77.2 kB] 352s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-3ubuntu1 [10.1 kB] 352s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-3ubuntu1 [335 kB] 352s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10 [140 kB] 352s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libunbound8 arm64 1.22.0-1ubuntu1 [437 kB] 353s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libgnutls-dane0t64 arm64 3.8.9-2ubuntu2 [24.4 kB] 353s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libgnutls-openssl27t64 arm64 3.8.9-2ubuntu2 [24.4 kB] 353s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libp11-kit-dev arm64 0.25.5-2ubuntu3 [23.5 kB] 353s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libtasn1-6-dev arm64 4.20.0-2 [91.1 kB] 353s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 nettle-dev arm64 3.10.1-1 [1190 kB] 354s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libgnutls28-dev arm64 3.8.9-2ubuntu2 [1143 kB] 355s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 356s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2build7 [69.4 kB] 356s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libssl-dev arm64 3.4.1-1ubuntu1 [3287 kB] 360s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libssh2-1-dev arm64 1.11.1-1 [286 kB] 360s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libzstd-dev arm64 1.5.6+dfsg-2 [353 kB] 361s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libcurl4-openssl-dev arm64 8.12.1-3ubuntu1 [506 kB] 362s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 362s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 362s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB] 362s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 362s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 363s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 363s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-310 arm64 1.14.5+repack-3 [1331 kB] 365s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-cpp-310 arm64 1.14.5+repack-3 [117 kB] 365s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-fortran-310 arm64 1.14.5+repack-3 [109 kB] 365s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [59.8 kB] 365s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-fortran-310 arm64 1.14.5+repack-3 [31.8 kB] 365s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-cpp-310 arm64 1.14.5+repack-3 [11.6 kB] 365s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 365s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 366s Get:106 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 366s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 366s Get:108 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 366s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec-dev arm64 1.1.3-1 [19.3 kB] 366s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-dev arm64 1.14.5+repack-3 [3581 kB] 369s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhnswlib-dev all 0.8.0-1build3 [24.4 kB] 369s Get:112 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 369s Get:113 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 370s Get:114 http://ftpmaster.internal/ubuntu plucky/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 382s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 382s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 382s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 383s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 383s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 383s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 383s Get:121 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 384s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 384s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 384s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 384s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 384s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 384s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 384s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 384s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 385s Get:130 http://ftpmaster.internal/ubuntu plucky/main arm64 libkpathsea6 arm64 2024.20240313.70630+ds-5build2 [64.3 kB] 385s Get:131 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 387s Get:132 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 393s Get:133 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 393s Get:134 http://ftpmaster.internal/ubuntu plucky/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 393s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmpfi0 arm64 1.5.4+ds-4 [35.3 kB] 393s Get:136 http://ftpmaster.internal/ubuntu plucky/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 394s Get:137 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 394s Get:138 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 394s Get:139 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.2-1 [237 kB] 394s Get:140 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.2-1 [49.5 kB] 394s Get:141 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.2-1 [27.6 kB] 394s Get:142 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 394s Get:143 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 394s Get:144 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 394s Get:145 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 395s Get:146 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 395s Get:147 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 396s Get:148 http://ftpmaster.internal/ubuntu plucky/main arm64 libpng-dev arm64 1.6.47-1 [269 kB] 396s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpotrace0 arm64 1.16-2build1 [16.0 kB] 396s Get:150 http://ftpmaster.internal/ubuntu plucky/main arm64 libptexenc1 arm64 2024.20240313.70630+ds-5build2 [41.7 kB] 396s Get:151 http://ftpmaster.internal/ubuntu plucky/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 396s Get:152 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 396s Get:153 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 396s Get:154 http://ftpmaster.internal/ubuntu plucky/main arm64 libsynctex2 arm64 2024.20240313.70630+ds-5build2 [60.3 kB] 396s Get:155 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 397s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 398s Get:157 http://ftpmaster.internal/ubuntu plucky/main arm64 libtexlua53-5 arm64 2024.20240313.70630+ds-5build2 [122 kB] 398s Get:158 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 398s Get:159 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 398s Get:160 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 398s Get:161 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 398s Get:162 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 398s Get:163 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 399s Get:164 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 399s Get:165 http://ftpmaster.internal/ubuntu plucky/main arm64 libxmu6 arm64 2:1.1.3-3build2 [47.5 kB] 399s Get:166 http://ftpmaster.internal/ubuntu plucky/main arm64 libxpm4 arm64 1:3.5.17-1build2 [35.1 kB] 399s Get:167 http://ftpmaster.internal/ubuntu plucky/main arm64 libxaw7 arm64 2:1.0.16-1 [184 kB] 400s Get:168 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 400s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.1 [30.8 kB] 400s Get:170 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 400s Get:171 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 400s Get:172 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 400s Get:173 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 434s Get:174 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 434s Get:175 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 434s Get:176 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 434s Get:177 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 434s Get:178 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 434s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 434s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 460s Get:181 http://ftpmaster.internal/ubuntu plucky/main arm64 liblzma-dev arm64 5.6.4-1 [180 kB] 461s Get:182 http://ftpmaster.internal/ubuntu plucky/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 461s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-dev all 4.4.3-1 [4176 B] 461s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 461s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 461s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-assorthead all 1.0.1+ds-2 [194 kB] 461s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 463s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB] 466s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB] 466s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 466s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 468s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-iranges arm64 2.40.1-2 [2303 kB] 470s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 470s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 470s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 471s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 471s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 472s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-sparsearray arm64 1.6.2+dfsg-1 [1369 kB] 473s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 475s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 475s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 476s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-beachmat arm64 2.22.0+ds-2 [940 kB] 477s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 479s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 480s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 480s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 480s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 480s Get:208 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 480s Get:209 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 480s Get:210 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 480s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 480s Get:212 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cpp11 all 0.5.2-1 [233 kB] 480s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 482s Get:214 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 482s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 482s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 482s Get:217 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB] 483s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 484s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 484s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xfun arm64 0.51+dfsg-1 [573 kB] 484s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 484s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 484s Get:223 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 489s Get:224 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 490s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 490s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 490s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 491s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 492s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 492s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 492s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 492s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 492s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 492s Get:234 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 493s Get:235 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 493s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 493s Get:237 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 497s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 498s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tinytex all 0.56-1 [148 kB] 498s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 498s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 498s Get:242 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 499s Get:243 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 499s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 499s Get:245 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 500s Get:246 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 500s Get:247 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 500s Get:248 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-commonmark arm64 1.9.2-2 [129 kB] 500s Get:249 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 500s Get:250 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 503s Get:251 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 505s Get:252 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 506s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 506s Get:254 http://ftpmaster.internal/ubuntu plucky/universe arm64 tex-common all 6.19 [29.8 kB] 506s Get:255 http://ftpmaster.internal/ubuntu plucky/main arm64 t1utils arm64 1.41-4build3 [61.0 kB] 506s Get:256 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-binaries arm64 2024.20240313.70630+ds-5build2 [8328 kB] 513s Get:257 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-base all 2024.20250114-1 [22.5 MB] 532s Get:258 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-latex-base all 2024.20250114-1 [1264 kB] 533s Get:259 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-bibtex-extra all 2024.20250114-1 [79.5 MB] 599s Get:260 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 599s Get:261 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 599s Get:262 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-curl arm64 6.2.1+dfsg-1ubuntu1 [196 kB] 599s Get:263 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 599s Get:264 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 599s Get:265 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 600s Get:266 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 600s Get:267 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 600s Get:268 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 611s Get:269 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 614s Get:270 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 628s Get:271 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 630s Get:272 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-xml arm64 3.99-0.18-1 [1745 kB] 631s Get:273 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-bitops arm64 1.0-9-1 [30.2 kB] 631s Get:274 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhtslib arm64 3.2.0+dfsg-2 [1429 kB] 632s Get:275 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rsamtools arm64 2.22.0+dfsg-2 [3668 kB] 635s Get:276 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 636s Get:277 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-genomicalignments arm64 1.42.0-2 [2164 kB] 637s Get:278 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcurl arm64 1.98-1.16+dfsg-1 [806 kB] 638s Get:279 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rjson arm64 0.2.23-1 [104 kB] 638s Get:280 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 638s Get:281 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rtracklayer arm64 1.66.0-2 [5218 kB] 642s Get:282 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-bsgenome all 1.74.0-2 [7001 kB] 649s Get:283 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 650s Get:284 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 650s Get:285 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 652s Get:286 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 652s Get:287 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 652s Get:288 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 653s Get:289 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 654s Get:290 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-locfit arm64 1.5-9.12-1 [514 kB] 654s Get:291 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtools arm64 3.9.5-1 [340 kB] 654s Get:292 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-data.table arm64 1.17.0+dfsg-1 [2129 kB] 656s Get:293 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 657s Get:294 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r.oo all 1.27.0-1 [979 kB] 657s Get:295 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r.utils all 2.13.0-1 [1423 kB] 659s Get:296 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-sparsematrixstats arm64 1.18.0+dfsg-2 [853 kB] 660s Get:297 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-delayedmatrixstats all 1.28.1+ds-1 [502 kB] 660s Get:298 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-permute all 0.9-7-1 [228 kB] 661s Get:299 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB] 661s Get:300 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-limma arm64 3.62.2+dfsg-1 [1968 kB] 663s Get:301 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhdf5lib arm64 1.28.0+dfsg-2build1 [97.4 kB] 663s Get:302 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhdf5filters arm64 1.18.0+dfsg-2 [135 kB] 663s Get:303 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-rhdf5 arm64 2.50.2+dfsg-1build1 [819 kB] 664s Get:304 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-hdf5array arm64 1.34.0-2build1 [8783 kB] 672s Get:305 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-bioc-bsseq arm64 1.42.0+dfsg-2 [3055 kB] 675s Get:306 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-backports arm64 1.5.0-2 [121 kB] 675s Get:307 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-base64url arm64 1.4-2build1 [26.4 kB] 675s Get:308 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brew all 1.0-10-1 [77.7 kB] 675s Get:309 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-checkmate arm64 2.3.2-1 [706 kB] 675s Get:310 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 675s Get:311 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 676s Get:312 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 676s Get:313 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 677s Get:314 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 677s Get:315 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-stringi arm64 1.8.4-1build1 [902 kB] 677s Get:316 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-batchtools arm64 0.9.17+dfsg-1 [712 kB] 678s Get:317 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 678s Get:318 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 678s Get:319 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 679s Get:320 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 679s Get:321 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 679s Get:322 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 680s Get:323 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-iterators all 1.0.14-1 [336 kB] 681s Get:324 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-foreach all 1.5.2-1 [124 kB] 681s Get:325 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-doparallel all 1.0.17-1 [189 kB] 681s Get:326 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 681s Get:327 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB] 681s Get:328 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB] 681s Get:329 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 681s Get:330 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-waldo all 0.6.1-2 [150 kB] 681s Get:331 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 684s Preconfiguring packages ... 684s Fetched 454 MB in 7min 11s (1053 kB/s) 684s Selecting previously unselected package libisl23:arm64. 685s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81647 files and directories currently installed.) 685s Preparing to unpack .../000-libisl23_0.27-1_arm64.deb ... 685s Unpacking libisl23:arm64 (0.27-1) ... 685s Selecting previously unselected package libmpc3:arm64. 685s Preparing to unpack .../001-libmpc3_1.3.1-1build2_arm64.deb ... 685s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 685s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 685s Preparing to unpack .../002-cpp-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 685s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 685s Selecting previously unselected package cpp-14. 685s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_arm64.deb ... 685s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 685s Selecting previously unselected package cpp-aarch64-linux-gnu. 685s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 685s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 685s Selecting previously unselected package cpp. 685s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 685s Unpacking cpp (4:14.2.0-1ubuntu1) ... 685s Selecting previously unselected package libcc1-0:arm64. 685s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_arm64.deb ... 685s Unpacking libcc1-0:arm64 (15-20250222-0ubuntu1) ... 685s Selecting previously unselected package libgomp1:arm64. 685s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_arm64.deb ... 685s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ... 685s Selecting previously unselected package libitm1:arm64. 685s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_arm64.deb ... 685s Unpacking libitm1:arm64 (15-20250222-0ubuntu1) ... 685s Selecting previously unselected package libasan8:arm64. 685s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_arm64.deb ... 685s Unpacking libasan8:arm64 (15-20250222-0ubuntu1) ... 686s Selecting previously unselected package liblsan0:arm64. 686s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_arm64.deb ... 686s Unpacking liblsan0:arm64 (15-20250222-0ubuntu1) ... 686s Selecting previously unselected package libtsan2:arm64. 686s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_arm64.deb ... 686s Unpacking libtsan2:arm64 (15-20250222-0ubuntu1) ... 686s Selecting previously unselected package libubsan1:arm64. 686s Preparing to unpack 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.../022-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 688s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 688s Selecting previously unselected package g++. 688s Preparing to unpack .../023-g++_4%3a14.2.0-1ubuntu1_arm64.deb ... 688s Unpacking g++ (4:14.2.0-1ubuntu1) ... 688s Selecting previously unselected package build-essential. 688s Preparing to unpack .../024-build-essential_12.10ubuntu1_arm64.deb ... 688s Unpacking build-essential (12.10ubuntu1) ... 688s Selecting previously unselected package dctrl-tools. 688s Preparing to unpack .../025-dctrl-tools_2.24-3build3_arm64.deb ... 688s Unpacking dctrl-tools (2.24-3build3) ... 688s Selecting previously unselected package fonts-dejavu-mono. 688s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ... 688s Unpacking fonts-dejavu-mono (2.37-8) ... 688s Selecting previously unselected package fonts-dejavu-core. 688s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ... 688s Unpacking fonts-dejavu-core (2.37-8) ... 688s Selecting previously unselected package fontconfig-config. 688s Preparing to unpack .../028-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ... 688s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 689s Selecting previously unselected package libfontconfig1:arm64. 689s Preparing to unpack .../029-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ... 689s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 689s Selecting previously unselected package fontconfig. 689s Preparing to unpack .../030-fontconfig_2.15.0-2ubuntu1_arm64.deb ... 689s Unpacking fontconfig (2.15.0-2ubuntu1) ... 689s Selecting previously unselected package fonts-font-awesome. 689s Preparing to unpack .../031-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 689s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 689s Selecting previously unselected package fonts-glyphicons-halflings. 689s Preparing to unpack .../032-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 689s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 689s Selecting previously unselected package fonts-lmodern. 689s Preparing to unpack .../033-fonts-lmodern_2.005-1_all.deb ... 689s Unpacking fonts-lmodern (2.005-1) ... 689s Selecting previously unselected package fonts-mathjax. 689s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 689s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 689s Selecting previously unselected package libgfortran5:arm64. 689s Preparing to unpack .../035-libgfortran5_15-20250222-0ubuntu1_arm64.deb ... 689s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ... 689s Selecting previously unselected package libgfortran-14-dev:arm64. 689s Preparing to unpack .../036-libgfortran-14-dev_14.2.0-17ubuntu3_arm64.deb ... 689s Unpacking libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 689s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 689s Preparing to unpack .../037-gfortran-14-aarch64-linux-gnu_14.2.0-17ubuntu3_arm64.deb ... 689s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 690s Selecting previously unselected package gfortran-14. 690s Preparing to unpack .../038-gfortran-14_14.2.0-17ubuntu3_arm64.deb ... 690s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 690s Selecting previously unselected package gfortran-aarch64-linux-gnu. 690s Preparing to unpack .../039-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 690s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 690s Selecting previously unselected package gfortran. 690s Preparing to unpack .../040-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ... 690s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 690s Selecting previously unselected package hdf5-helpers. 690s Preparing to unpack .../041-hdf5-helpers_1.14.5+repack-3_arm64.deb ... 690s Unpacking hdf5-helpers (1.14.5+repack-3) ... 690s Selecting previously unselected package icu-devtools. 690s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_arm64.deb ... 690s Unpacking icu-devtools (76.1-1ubuntu2) ... 690s Selecting previously unselected package javascript-common. 690s Preparing to unpack .../043-javascript-common_12_all.deb ... 690s Unpacking javascript-common (12) ... 690s Selecting previously unselected package comerr-dev:arm64. 690s Preparing to unpack .../044-comerr-dev_2.1-1.47.2-1ubuntu1_arm64.deb ... 690s Unpacking comerr-dev:arm64 (2.1-1.47.2-1ubuntu1) ... 690s Selecting previously unselected package libgssrpc4t64:arm64. 690s Preparing to unpack .../045-libgssrpc4t64_1.21.3-4ubuntu2_arm64.deb ... 690s Unpacking libgssrpc4t64:arm64 (1.21.3-4ubuntu2) ... 690s Selecting previously unselected package libkadm5clnt-mit12:arm64. 690s Preparing to unpack .../046-libkadm5clnt-mit12_1.21.3-4ubuntu2_arm64.deb ... 690s Unpacking libkadm5clnt-mit12:arm64 (1.21.3-4ubuntu2) ... 690s Selecting previously unselected package libkdb5-10t64:arm64. 690s Preparing to unpack .../047-libkdb5-10t64_1.21.3-4ubuntu2_arm64.deb ... 690s Unpacking libkdb5-10t64:arm64 (1.21.3-4ubuntu2) ... 690s Selecting previously unselected package libkadm5srv-mit12:arm64. 690s Preparing to unpack .../048-libkadm5srv-mit12_1.21.3-4ubuntu2_arm64.deb ... 690s Unpacking libkadm5srv-mit12:arm64 (1.21.3-4ubuntu2) ... 690s Selecting previously unselected package krb5-multidev:arm64. 690s Preparing to unpack .../049-krb5-multidev_1.21.3-4ubuntu2_arm64.deb ... 690s Unpacking krb5-multidev:arm64 (1.21.3-4ubuntu2) ... 690s Selecting previously unselected package libaec0:arm64. 690s Preparing to unpack .../050-libaec0_1.1.3-1_arm64.deb ... 690s Unpacking libaec0:arm64 (1.1.3-1) ... 691s Selecting previously unselected package libio-string-perl. 691s Preparing to unpack .../051-libio-string-perl_1.08-4_all.deb ... 691s Unpacking libio-string-perl (1.08-4) ... 691s Selecting previously unselected package liblatex-tounicode-perl. 691s Preparing to unpack .../052-liblatex-tounicode-perl_0.55-1_all.deb ... 691s Unpacking liblatex-tounicode-perl (0.55-1) ... 691s Selecting previously unselected package libbibtex-parser-perl. 691s Preparing to unpack .../053-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 691s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 691s Selecting previously unselected package libblas3:arm64. 691s Preparing to unpack .../054-libblas3_3.12.1-2_arm64.deb ... 691s Unpacking libblas3:arm64 (3.12.1-2) ... 691s Selecting previously unselected package libblas-dev:arm64. 691s Preparing to unpack .../055-libblas-dev_3.12.1-2_arm64.deb ... 691s Unpacking libblas-dev:arm64 (3.12.1-2) ... 691s Selecting previously unselected package libsnappy1v5:arm64. 691s Preparing to unpack .../056-libsnappy1v5_1.2.1-1_arm64.deb ... 691s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 691s Selecting previously unselected package libblosc1:arm64. 691s Preparing to unpack .../057-libblosc1_1.21.5+ds-1build1_arm64.deb ... 691s Unpacking libblosc1:arm64 (1.21.5+ds-1build1) ... 691s Selecting previously unselected package libboost1.83-dev:arm64. 691s Preparing to unpack .../058-libboost1.83-dev_1.83.0-4.1ubuntu2_arm64.deb ... 691s Unpacking libboost1.83-dev:arm64 (1.83.0-4.1ubuntu2) ... 693s Selecting previously unselected package libboost-dev:arm64. 693s Preparing to unpack .../059-libboost-dev_1.83.0.2ubuntu1_arm64.deb ... 693s Unpacking libboost-dev:arm64 (1.83.0.2ubuntu1) ... 693s Selecting previously unselected package libbrotli-dev:arm64. 694s Preparing to unpack .../060-libbrotli-dev_1.1.0-2build4_arm64.deb ... 694s Unpacking libbrotli-dev:arm64 (1.1.0-2build4) ... 694s Selecting previously unselected package libbz2-dev:arm64. 694s Preparing to unpack .../061-libbz2-dev_1.0.8-6_arm64.deb ... 694s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 694s Selecting previously unselected package libpixman-1-0:arm64. 694s Preparing to unpack .../062-libpixman-1-0_0.44.0-3_arm64.deb ... 694s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 694s Selecting previously unselected package libxcb-render0:arm64. 694s Preparing to unpack .../063-libxcb-render0_1.17.0-2_arm64.deb ... 694s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 694s Selecting previously unselected package libxcb-shm0:arm64. 694s Preparing to unpack .../064-libxcb-shm0_1.17.0-2_arm64.deb ... 694s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 694s Selecting previously unselected package libxrender1:arm64. 694s Preparing to unpack .../065-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 694s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 694s Selecting previously unselected package libcairo2:arm64. 694s Preparing to unpack .../066-libcairo2_1.18.2-2_arm64.deb ... 694s Unpacking libcairo2:arm64 (1.18.2-2) ... 694s Selecting previously unselected package libidn2-dev:arm64. 694s Preparing to unpack .../067-libidn2-dev_2.3.7-2build2_arm64.deb ... 694s Unpacking libidn2-dev:arm64 (2.3.7-2build2) ... 694s Selecting previously unselected package libkrb5-dev:arm64. 694s Preparing to unpack .../068-libkrb5-dev_1.21.3-4ubuntu2_arm64.deb ... 694s Unpacking libkrb5-dev:arm64 (1.21.3-4ubuntu2) ... 694s Selecting previously unselected package libldap-dev:arm64. 694s Preparing to unpack .../069-libldap-dev_2.6.9+dfsg-1~exp2ubuntu1_arm64.deb ... 694s Unpacking libldap-dev:arm64 (2.6.9+dfsg-1~exp2ubuntu1) ... 694s Selecting previously unselected package libpkgconf3:arm64. 694s Preparing to unpack .../070-libpkgconf3_1.8.1-4_arm64.deb ... 694s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 694s Selecting previously unselected package pkgconf-bin. 694s Preparing to unpack .../071-pkgconf-bin_1.8.1-4_arm64.deb ... 694s Unpacking pkgconf-bin (1.8.1-4) ... 694s Selecting previously unselected package pkgconf:arm64. 694s Preparing to unpack .../072-pkgconf_1.8.1-4_arm64.deb ... 694s Unpacking pkgconf:arm64 (1.8.1-4) ... 695s Selecting previously unselected package libnghttp2-dev:arm64. 695s Preparing to unpack .../073-libnghttp2-dev_1.64.0-1_arm64.deb ... 695s Unpacking libnghttp2-dev:arm64 (1.64.0-1) ... 695s Selecting previously unselected package libpsl-dev:arm64. 695s Preparing to unpack .../074-libpsl-dev_0.21.2-1.1build1_arm64.deb ... 695s Unpacking libpsl-dev:arm64 (0.21.2-1.1build1) ... 695s Selecting previously unselected package libgmpxx4ldbl:arm64. 695s Preparing to unpack .../075-libgmpxx4ldbl_2%3a6.3.0+dfsg-3ubuntu1_arm64.deb ... 695s Unpacking libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-3ubuntu1) ... 695s Selecting previously unselected package libgmp-dev:arm64. 695s Preparing to unpack .../076-libgmp-dev_2%3a6.3.0+dfsg-3ubuntu1_arm64.deb ... 695s Unpacking libgmp-dev:arm64 (2:6.3.0+dfsg-3ubuntu1) ... 695s Selecting previously unselected package libevent-2.1-7t64:arm64. 695s Preparing to unpack .../077-libevent-2.1-7t64_2.1.12-stable-10_arm64.deb ... 695s Unpacking libevent-2.1-7t64:arm64 (2.1.12-stable-10) ... 695s Selecting previously unselected package libunbound8:arm64. 695s Preparing to unpack .../078-libunbound8_1.22.0-1ubuntu1_arm64.deb ... 695s Unpacking libunbound8:arm64 (1.22.0-1ubuntu1) ... 695s Selecting previously unselected package libgnutls-dane0t64:arm64. 695s Preparing to unpack .../079-libgnutls-dane0t64_3.8.9-2ubuntu2_arm64.deb ... 695s Unpacking libgnutls-dane0t64:arm64 (3.8.9-2ubuntu2) ... 695s Selecting previously unselected package libgnutls-openssl27t64:arm64. 695s Preparing to unpack .../080-libgnutls-openssl27t64_3.8.9-2ubuntu2_arm64.deb ... 695s Unpacking libgnutls-openssl27t64:arm64 (3.8.9-2ubuntu2) ... 695s Selecting previously unselected package libp11-kit-dev:arm64. 695s Preparing to unpack .../081-libp11-kit-dev_0.25.5-2ubuntu3_arm64.deb ... 695s Unpacking libp11-kit-dev:arm64 (0.25.5-2ubuntu3) ... 695s Selecting previously unselected package libtasn1-6-dev:arm64. 695s Preparing to unpack .../082-libtasn1-6-dev_4.20.0-2_arm64.deb ... 695s Unpacking libtasn1-6-dev:arm64 (4.20.0-2) ... 695s Selecting previously unselected package nettle-dev:arm64. 695s Preparing to unpack .../083-nettle-dev_3.10.1-1_arm64.deb ... 695s Unpacking nettle-dev:arm64 (3.10.1-1) ... 695s Selecting previously unselected package libgnutls28-dev:arm64. 695s Preparing to unpack .../084-libgnutls28-dev_3.8.9-2ubuntu2_arm64.deb ... 695s Unpacking libgnutls28-dev:arm64 (3.8.9-2ubuntu2) ... 696s Selecting previously unselected package zlib1g-dev:arm64. 696s Preparing to unpack .../085-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 696s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 696s Selecting previously unselected package librtmp-dev:arm64. 696s Preparing to unpack .../086-librtmp-dev_2.4+20151223.gitfa8646d.1-2build7_arm64.deb ... 696s Unpacking librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2build7) ... 696s Selecting previously unselected package libssl-dev:arm64. 696s Preparing to unpack .../087-libssl-dev_3.4.1-1ubuntu1_arm64.deb ... 696s Unpacking libssl-dev:arm64 (3.4.1-1ubuntu1) ... 696s Selecting previously unselected package libssh2-1-dev:arm64. 696s Preparing to unpack .../088-libssh2-1-dev_1.11.1-1_arm64.deb ... 696s Unpacking libssh2-1-dev:arm64 (1.11.1-1) ... 696s Selecting previously unselected package libzstd-dev:arm64. 696s Preparing to unpack .../089-libzstd-dev_1.5.6+dfsg-2_arm64.deb ... 696s Unpacking libzstd-dev:arm64 (1.5.6+dfsg-2) ... 696s Selecting previously unselected package libcurl4-openssl-dev:arm64. 696s Preparing to unpack .../090-libcurl4-openssl-dev_8.12.1-3ubuntu1_arm64.deb ... 696s Unpacking libcurl4-openssl-dev:arm64 (8.12.1-3ubuntu1) ... 696s Selecting previously unselected package libdatrie1:arm64. 696s Preparing to unpack .../091-libdatrie1_0.2.13-3build1_arm64.deb ... 696s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 696s Selecting previously unselected package libdeflate0:arm64. 696s Preparing to unpack .../092-libdeflate0_1.23-1_arm64.deb ... 696s Unpacking libdeflate0:arm64 (1.23-1) ... 696s Selecting previously unselected package libdeflate-dev:arm64. 696s Preparing to unpack .../093-libdeflate-dev_1.23-1_arm64.deb ... 696s Unpacking libdeflate-dev:arm64 (1.23-1) ... 696s Selecting previously unselected package libgraphite2-3:arm64. 696s Preparing to unpack .../094-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 696s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 696s Selecting previously unselected package libharfbuzz0b:arm64. 696s Preparing to unpack .../095-libharfbuzz0b_10.2.0-1_arm64.deb ... 696s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 697s Selecting previously unselected package libsz2:arm64. 697s Preparing to unpack .../096-libsz2_1.1.3-1_arm64.deb ... 697s Unpacking libsz2:arm64 (1.1.3-1) ... 697s Selecting previously unselected package libhdf5-310:arm64. 697s Preparing to unpack .../097-libhdf5-310_1.14.5+repack-3_arm64.deb ... 697s Unpacking libhdf5-310:arm64 (1.14.5+repack-3) ... 697s Selecting previously unselected package libhdf5-cpp-310:arm64. 697s Preparing to unpack .../098-libhdf5-cpp-310_1.14.5+repack-3_arm64.deb ... 697s Unpacking libhdf5-cpp-310:arm64 (1.14.5+repack-3) ... 697s Selecting previously unselected package libhdf5-fortran-310:arm64. 697s Preparing to unpack .../099-libhdf5-fortran-310_1.14.5+repack-3_arm64.deb ... 697s Unpacking libhdf5-fortran-310:arm64 (1.14.5+repack-3) ... 697s Selecting previously unselected package libhdf5-hl-310:arm64. 697s Preparing to unpack .../100-libhdf5-hl-310_1.14.5+repack-3_arm64.deb ... 697s Unpacking libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 697s Selecting previously unselected package libhdf5-hl-fortran-310:arm64. 697s Preparing to unpack .../101-libhdf5-hl-fortran-310_1.14.5+repack-3_arm64.deb ... 697s Unpacking libhdf5-hl-fortran-310:arm64 (1.14.5+repack-3) ... 697s Selecting previously unselected package libhdf5-hl-cpp-310:arm64. 697s Preparing to unpack .../102-libhdf5-hl-cpp-310_1.14.5+repack-3_arm64.deb ... 697s Unpacking libhdf5-hl-cpp-310:arm64 (1.14.5+repack-3) ... 697s Selecting previously unselected package libjpeg-turbo8:arm64. 697s Preparing to unpack .../103-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 697s Unpacking libjpeg-turbo8:arm64 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unselected package libhdf5-dev. 698s Preparing to unpack .../109-libhdf5-dev_1.14.5+repack-3_arm64.deb ... 698s Unpacking libhdf5-dev (1.14.5+repack-3) ... 698s Selecting previously unselected package libhnswlib-dev. 698s Preparing to unpack .../110-libhnswlib-dev_0.8.0-1build3_all.deb ... 698s Unpacking libhnswlib-dev (0.8.0-1build3) ... 698s Selecting previously unselected package x11-common. 698s Preparing to unpack .../111-x11-common_1%3a7.7+23ubuntu3_all.deb ... 698s Unpacking x11-common (1:7.7+23ubuntu3) ... 698s Selecting previously unselected package libice6:arm64. 698s Preparing to unpack .../112-libice6_2%3a1.1.1-1_arm64.deb ... 698s Unpacking libice6:arm64 (2:1.1.1-1) ... 698s Selecting previously unselected package libicu-dev:arm64. 698s Preparing to unpack .../113-libicu-dev_76.1-1ubuntu2_arm64.deb ... 698s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 698s Selecting previously unselected package libjs-bootstrap. 698s Preparing to unpack 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Selecting previously unselected package liblapack3:arm64. 700s Preparing to unpack .../130-liblapack3_3.12.1-2_arm64.deb ... 700s Unpacking liblapack3:arm64 (3.12.1-2) ... 700s Selecting previously unselected package liblapack-dev:arm64. 700s Preparing to unpack .../131-liblapack-dev_3.12.1-2_arm64.deb ... 700s Unpacking liblapack-dev:arm64 (3.12.1-2) ... 700s Selecting previously unselected package liblerc4:arm64. 700s Preparing to unpack .../132-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 700s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 700s Selecting previously unselected package liblua5.4-0:arm64. 700s Preparing to unpack .../133-liblua5.4-0_5.4.7-1_arm64.deb ... 700s Unpacking liblua5.4-0:arm64 (5.4.7-1) ... 700s Selecting previously unselected package libmpfi0:arm64. 700s Preparing to unpack .../134-libmpfi0_1.5.4+ds-4_arm64.deb ... 700s Unpacking libmpfi0:arm64 (1.5.4+ds-4) ... 700s Selecting previously unselected package libncurses-dev:arm64. 700s Preparing to unpack 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Selecting previously unselected package libsharpyuv0:arm64. 702s Preparing to unpack .../151-libsharpyuv0_1.5.0-0.1_arm64.deb ... 702s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 702s Selecting previously unselected package libsm6:arm64. 702s Preparing to unpack .../152-libsm6_2%3a1.2.4-1_arm64.deb ... 702s Unpacking libsm6:arm64 (2:1.2.4-1) ... 702s Selecting previously unselected package libsynctex2:arm64. 702s Preparing to unpack .../153-libsynctex2_2024.20240313.70630+ds-5build2_arm64.deb ... 702s Unpacking libsynctex2:arm64 (2024.20240313.70630+ds-5build2) ... 702s Selecting previously unselected package libtcl8.6:arm64. 702s Preparing to unpack .../154-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 702s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 702s Selecting previously unselected package libteckit0:arm64. 702s Preparing to unpack .../155-libteckit0_2.5.12+ds1-1_arm64.deb ... 702s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 702s Selecting previously unselected package libtexlua53-5:arm64. 702s Preparing to unpack .../156-libtexlua53-5_2024.20240313.70630+ds-5build2_arm64.deb ... 702s Unpacking libtexlua53-5:arm64 (2024.20240313.70630+ds-5build2) ... 702s Selecting previously unselected package libjbig0:arm64. 702s Preparing to unpack .../157-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 702s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 702s Selecting previously unselected package libwebp7:arm64. 702s Preparing to unpack .../158-libwebp7_1.5.0-0.1_arm64.deb ... 702s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 702s Selecting previously unselected package libtiff6:arm64. 702s Preparing to unpack .../159-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 702s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 702s Selecting previously unselected package libxft2:arm64. 702s Preparing to unpack .../160-libxft2_2.3.6-1build1_arm64.deb ... 702s Unpacking libxft2:arm64 (2.3.6-1build1) ... 703s Selecting previously unselected package libxss1:arm64. 703s Preparing to unpack .../161-libxss1_1%3a1.2.3-1build3_arm64.deb ... 703s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 703s Selecting previously unselected package libtk8.6:arm64. 703s Preparing to unpack .../162-libtk8.6_8.6.16-1_arm64.deb ... 703s Unpacking libtk8.6:arm64 (8.6.16-1) ... 703s Selecting previously unselected package libxt6t64:arm64. 703s Preparing to unpack .../163-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 703s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 703s Selecting previously unselected package libxmu6:arm64. 703s Preparing to unpack .../164-libxmu6_2%3a1.1.3-3build2_arm64.deb ... 703s Unpacking libxmu6:arm64 (2:1.1.3-3build2) ... 703s Selecting previously unselected package libxpm4:arm64. 703s Preparing to unpack .../165-libxpm4_1%3a3.5.17-1build2_arm64.deb ... 703s Unpacking libxpm4:arm64 (1:3.5.17-1build2) ... 703s Selecting previously unselected package libxaw7:arm64. 703s Preparing to unpack .../166-libxaw7_2%3a1.0.16-1_arm64.deb ... 703s Unpacking libxaw7:arm64 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unselected package pandoc-data. 704s Preparing to unpack .../178-pandoc-data_3.1.11.1-3build1_all.deb ... 704s Unpacking pandoc-data (3.1.11.1-3build1) ... 705s Selecting previously unselected package pandoc. 705s Preparing to unpack .../179-pandoc_3.1.11.1+ds-2_arm64.deb ... 705s Unpacking pandoc (3.1.11.1+ds-2) ... 706s Selecting previously unselected package liblzma-dev:arm64. 706s Preparing to unpack .../180-liblzma-dev_5.6.4-1_arm64.deb ... 706s Unpacking liblzma-dev:arm64 (5.6.4-1) ... 706s Selecting previously unselected package libtirpc-dev:arm64. 706s Preparing to unpack .../181-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 706s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 706s Selecting previously unselected package r-base-dev. 706s Preparing to unpack .../182-r-base-dev_4.4.3-1_all.deb ... 706s Unpacking r-base-dev (4.4.3-1) ... 706s Selecting previously unselected package pkg-r-autopkgtest. 706s Preparing to unpack .../183-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 706s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 706s Selecting previously unselected package r-bioc-biocgenerics. 706s Preparing to unpack .../184-r-bioc-biocgenerics_0.52.0-2_all.deb ... 706s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 706s Selecting previously unselected package r-bioc-assorthead. 706s Preparing to unpack .../185-r-bioc-assorthead_1.0.1+ds-2_all.deb ... 706s Unpacking r-bioc-assorthead (1.0.1+ds-2) ... 706s Selecting previously unselected package r-cran-lattice. 706s Preparing to unpack .../186-r-cran-lattice_0.22-6-1_arm64.deb ... 706s Unpacking r-cran-lattice (0.22-6-1) ... 706s Selecting previously unselected package r-cran-matrix. 706s Preparing to unpack .../187-r-cran-matrix_1.7-3-1_arm64.deb ... 706s Unpacking r-cran-matrix (1.7-3-1) ... 707s Selecting previously unselected package r-cran-matrixstats. 707s Preparing to unpack .../188-r-cran-matrixstats_1.5.0-1_arm64.deb ... 707s Unpacking r-cran-matrixstats (1.5.0-1) ... 707s Selecting previously unselected package r-bioc-matrixgenerics. 707s Preparing to unpack .../189-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 707s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 707s Selecting previously unselected package r-bioc-s4vectors. 707s Preparing to unpack .../190-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 707s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 707s Selecting previously unselected package r-bioc-iranges. 707s Preparing to unpack .../191-r-bioc-iranges_2.40.1-2_arm64.deb ... 707s Unpacking r-bioc-iranges (2.40.1-2) ... 707s Selecting previously unselected package r-cran-abind. 707s Preparing to unpack .../192-r-cran-abind_1.4-8-1_all.deb ... 707s Unpacking r-cran-abind (1.4-8-1) ... 707s Selecting previously unselected package r-cran-crayon. 707s Preparing to unpack .../193-r-cran-crayon_1.5.3-1_all.deb ... 707s Unpacking r-cran-crayon (1.5.3-1) ... 707s Selecting previously unselected package r-bioc-s4arrays. 707s Preparing to unpack .../194-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 707s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 707s Selecting previously unselected package r-bioc-zlibbioc. 707s Preparing to unpack .../195-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 707s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 707s Selecting previously unselected package r-bioc-xvector. 707s Preparing to unpack .../196-r-bioc-xvector_0.46.0-2_arm64.deb ... 707s Unpacking r-bioc-xvector (0.46.0-2) ... 707s Selecting previously unselected package r-bioc-sparsearray. 707s Preparing to unpack .../197-r-bioc-sparsearray_1.6.2+dfsg-1_arm64.deb ... 707s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 707s Selecting previously unselected package r-bioc-delayedarray. 707s Preparing to unpack .../198-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 707s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 707s Selecting previously unselected package r-cran-pkgkitten. 707s Preparing to unpack .../199-r-cran-pkgkitten_0.2.4-1_all.deb ... 707s Unpacking r-cran-pkgkitten (0.2.4-1) ... 707s Selecting previously unselected package r-cran-rcpp. 707s Preparing to unpack .../200-r-cran-rcpp_1.0.14-1_arm64.deb ... 707s Unpacking r-cran-rcpp (1.0.14-1) ... 707s Selecting previously unselected package r-bioc-beachmat. 707s Preparing to unpack .../201-r-bioc-beachmat_2.22.0+ds-2_arm64.deb ... 707s Unpacking r-bioc-beachmat (2.22.0+ds-2) ... 708s Selecting previously unselected package r-bioc-biobase. 708s Preparing to unpack .../202-r-bioc-biobase_2.66.0-2_arm64.deb ... 708s Unpacking r-bioc-biobase (2.66.0-2) ... 708s Selecting previously unselected package r-bioc-biocio. 708s Preparing to unpack .../203-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 708s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 708s Selecting previously unselected package r-cran-formatr. 708s Preparing to unpack .../204-r-cran-formatr_1.14-2_all.deb ... 708s Unpacking r-cran-formatr (1.14-2) ... 708s Selecting previously unselected package r-cran-lambda.r. 708s Preparing to unpack .../205-r-cran-lambda.r_1.2.4-2build1_all.deb ... 708s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 708s Selecting previously unselected package r-cran-futile.options. 708s Preparing to unpack .../206-r-cran-futile.options_1.0.1-3build1_all.deb ... 708s Unpacking r-cran-futile.options (1.0.1-3build1) ... 708s Selecting previously unselected package r-cran-futile.logger. 708s Preparing to unpack .../207-r-cran-futile.logger_1.4.3-4build1_all.deb ... 708s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 708s Selecting previously unselected package r-cran-snow. 708s Preparing to unpack .../208-r-cran-snow_1%3a0.4.4-2_all.deb ... 708s Unpacking r-cran-snow (1:0.4.4-2) ... 708s Selecting previously unselected package r-cran-codetools. 708s Preparing to unpack .../209-r-cran-codetools_0.2-20-1_all.deb ... 708s Unpacking r-cran-codetools (0.2-20-1) ... 708s Selecting previously unselected package r-cran-bh. 708s Preparing to unpack .../210-r-cran-bh_1.84.0-1_all.deb ... 708s Unpacking r-cran-bh (1.84.0-1) ... 708s Selecting previously unselected package r-cran-cpp11. 708s Preparing to unpack .../211-r-cran-cpp11_0.5.2-1_all.deb ... 708s Unpacking r-cran-cpp11 (0.5.2-1) ... 708s Selecting previously unselected package r-bioc-biocparallel. 708s Preparing to unpack .../212-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 708s Unpacking r-bioc-biocparallel (1.40.0-2) ... 708s Selecting previously unselected package r-cran-base64enc. 708s Preparing to unpack .../213-r-cran-base64enc_0.1-3-3_arm64.deb ... 708s Unpacking r-cran-base64enc (0.1-3-3) ... 708s Selecting previously unselected package r-cran-digest. 708s Preparing to unpack .../214-r-cran-digest_0.6.37-1_arm64.deb ... 708s Unpacking r-cran-digest (0.6.37-1) ... 708s Selecting previously unselected package r-cran-fastmap. 708s Preparing to unpack .../215-r-cran-fastmap_1.2.0-1_arm64.deb ... 708s Unpacking r-cran-fastmap (1.2.0-1) ... 708s Selecting previously unselected package r-cran-rlang. 708s Preparing to unpack .../216-r-cran-rlang_1.1.5-1_arm64.deb ... 708s Unpacking r-cran-rlang (1.1.5-1) ... 708s Selecting previously unselected package r-cran-htmltools. 708s Preparing to unpack .../217-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 708s Unpacking r-cran-htmltools (0.5.8.1-1) ... 709s Selecting previously unselected package r-cran-evaluate. 709s Preparing to unpack .../218-r-cran-evaluate_1.0.3-1_all.deb ... 709s Unpacking r-cran-evaluate (1.0.3-1) ... 709s Selecting previously unselected package r-cran-xfun. 709s Preparing to unpack .../219-r-cran-xfun_0.51+dfsg-1_arm64.deb ... 709s Unpacking r-cran-xfun (0.51+dfsg-1) ... 709s Selecting previously unselected package r-cran-highr. 709s Preparing to unpack .../220-r-cran-highr_0.11+dfsg-1_all.deb ... 709s Unpacking r-cran-highr (0.11+dfsg-1) ... 709s Selecting previously unselected package r-cran-yaml. 709s Preparing to unpack .../221-r-cran-yaml_2.3.10-1_arm64.deb ... 709s Unpacking r-cran-yaml (2.3.10-1) ... 709s Selecting previously unselected package libjs-mathjax. 709s Preparing to unpack .../222-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 709s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 709s Selecting previously unselected package r-cran-knitr. 709s Preparing to unpack .../223-r-cran-knitr_1.49+dfsg-1_all.deb ... 709s Unpacking r-cran-knitr (1.49+dfsg-1) ... 709s Selecting previously unselected package r-cran-cachem. 710s Preparing to unpack .../224-r-cran-cachem_1.1.0-1_arm64.deb ... 710s Unpacking r-cran-cachem (1.1.0-1) ... 710s Selecting previously unselected package r-cran-jquerylib. 710s Preparing to unpack .../225-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 710s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 710s Selecting previously unselected package r-cran-jsonlite. 710s Preparing to unpack .../226-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 710s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 710s Selecting previously unselected package r-cran-cli. 710s Preparing to unpack .../227-r-cran-cli_3.6.4-1_arm64.deb ... 710s Unpacking r-cran-cli (3.6.4-1) ... 710s Selecting previously unselected package r-cran-glue. 710s Preparing to unpack .../228-r-cran-glue_1.8.0-1_arm64.deb ... 710s Unpacking r-cran-glue (1.8.0-1) ... 710s Selecting previously unselected package r-cran-lifecycle. 710s Preparing to unpack .../229-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 710s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 710s Selecting previously unselected package r-cran-memoise. 710s Preparing to unpack .../230-r-cran-memoise_2.0.1-1_all.deb ... 710s Unpacking r-cran-memoise (2.0.1-1) ... 710s Selecting previously unselected package r-cran-mime. 710s Preparing to unpack .../231-r-cran-mime_0.12-2_arm64.deb ... 710s Unpacking r-cran-mime (0.12-2) ... 710s Selecting previously unselected package r-cran-fs. 710s Preparing to unpack .../232-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 710s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 710s Selecting previously unselected package r-cran-r6. 710s Preparing to unpack .../233-r-cran-r6_2.6.1-1_all.deb ... 710s Unpacking r-cran-r6 (2.6.1-1) ... 710s Selecting previously unselected package r-cran-rappdirs. 710s Preparing to unpack .../234-r-cran-rappdirs_0.3.3-1_arm64.deb ... 710s Unpacking r-cran-rappdirs (0.3.3-1) ... 710s Selecting previously unselected package r-cran-sass. 710s Preparing to unpack .../235-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 710s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 710s Selecting previously unselected package r-cran-bslib. 710s Preparing to unpack .../236-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 710s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 710s Selecting previously unselected package r-cran-fontawesome. 710s Preparing to unpack .../237-r-cran-fontawesome_0.5.3-1_all.deb ... 710s Unpacking r-cran-fontawesome (0.5.3-1) ... 710s Selecting previously unselected package r-cran-tinytex. 711s Preparing to unpack .../238-r-cran-tinytex_0.56-1_all.deb ... 711s Unpacking r-cran-tinytex (0.56-1) ... 711s Selecting previously unselected package libjs-modernizr. 711s Preparing to unpack .../239-libjs-modernizr_3.13.0-0.1_all.deb ... 711s Unpacking libjs-modernizr (3.13.0-0.1) ... 711s Selecting previously unselected package r-cran-later. 711s Preparing to unpack .../240-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 711s Unpacking r-cran-later (1.4.1+dfsg-1) ... 711s Selecting previously unselected package r-cran-magrittr. 711s Preparing to unpack .../241-r-cran-magrittr_2.0.3-1_arm64.deb ... 711s Unpacking r-cran-magrittr (2.0.3-1) ... 711s Selecting previously unselected package r-cran-promises. 711s Preparing to unpack .../242-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 711s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 711s Selecting previously unselected package r-cran-httpuv. 711s Preparing to unpack .../243-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 711s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 711s Selecting previously unselected package r-cran-xtable. 711s Preparing to unpack .../244-r-cran-xtable_1%3a1.8-4-2_all.deb ... 711s Unpacking r-cran-xtable (1:1.8-4-2) ... 711s Selecting previously unselected package r-cran-sourcetools. 711s Preparing to unpack .../245-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 711s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 711s Selecting previously unselected package r-cran-withr. 711s Preparing to unpack .../246-r-cran-withr_3.0.2+dfsg-1_all.deb ... 711s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 711s Selecting previously unselected package r-cran-commonmark. 711s Preparing to unpack .../247-r-cran-commonmark_1.9.2-2_arm64.deb ... 711s Unpacking r-cran-commonmark (1.9.2-2) ... 711s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 711s Preparing to unpack .../248-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 711s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 711s Selecting previously unselected package r-cran-shiny. 711s Preparing to unpack .../249-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 711s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 711s Selecting previously unselected package r-cran-rmarkdown. 711s Preparing to unpack .../250-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 711s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 711s Selecting previously unselected package r-cran-bookdown. 711s Preparing to unpack .../251-r-cran-bookdown_0.42+dfsg-1_all.deb ... 711s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 712s Selecting previously unselected package r-cran-biocmanager. 712s Preparing to unpack .../252-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 712s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 712s Selecting previously unselected package tex-common. 712s Preparing to unpack .../253-tex-common_6.19_all.deb ... 712s Unpacking tex-common (6.19) ... 712s Selecting previously unselected package t1utils. 712s Preparing to unpack .../254-t1utils_1.41-4build3_arm64.deb ... 712s Unpacking t1utils (1.41-4build3) ... 712s Selecting previously unselected package texlive-binaries. 712s Preparing to unpack .../255-texlive-binaries_2024.20240313.70630+ds-5build2_arm64.deb ... 712s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ... 712s Selecting previously unselected package texlive-base. 712s Preparing to unpack .../256-texlive-base_2024.20250114-1_all.deb ... 712s Unpacking texlive-base (2024.20250114-1) ... 713s Selecting previously unselected package texlive-latex-base. 713s Preparing to unpack .../257-texlive-latex-base_2024.20250114-1_all.deb ... 713s Unpacking texlive-latex-base (2024.20250114-1) ... 714s Selecting previously unselected package texlive-bibtex-extra. 714s Preparing to unpack .../258-texlive-bibtex-extra_2024.20250114-1_all.deb ... 714s Unpacking texlive-bibtex-extra (2024.20250114-1) ... 716s Selecting previously unselected package r-bioc-biocversion. 716s Preparing to unpack .../259-r-bioc-biocversion_3.20.0-2_all.deb ... 716s Unpacking r-bioc-biocversion (3.20.0-2) ... 716s Selecting previously unselected package r-bioc-biocstyle. 716s Preparing to unpack .../260-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 716s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 716s Selecting previously unselected package r-cran-curl. 716s Preparing to unpack .../261-r-cran-curl_6.2.1+dfsg-1ubuntu1_arm64.deb ... 716s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 716s Selecting previously unselected package r-cran-sys. 716s Preparing to unpack .../262-r-cran-sys_3.4.3-1_arm64.deb ... 716s Unpacking r-cran-sys (3.4.3-1) ... 716s Selecting previously unselected package r-cran-askpass. 716s Preparing to unpack .../263-r-cran-askpass_1.2.1-1_arm64.deb ... 716s Unpacking r-cran-askpass (1.2.1-1) ... 716s Selecting previously unselected package r-cran-openssl. 716s Preparing to unpack .../264-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 716s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 716s Selecting previously unselected package r-cran-httr. 716s Preparing to unpack .../265-r-cran-httr_1.4.7+dfsg-1_all.deb ... 716s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 717s Selecting previously unselected package r-bioc-ucsc.utils. 717s Preparing to unpack .../266-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 717s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 717s Selecting previously unselected package r-bioc-genomeinfodbdata. 717s Preparing to unpack .../267-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 717s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 717s Selecting previously unselected package r-bioc-genomeinfodb. 717s Preparing to unpack .../268-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 717s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 717s Selecting previously unselected package r-bioc-biostrings. 717s Preparing to unpack .../269-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 717s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 717s Selecting previously unselected package r-bioc-genomicranges. 717s Preparing to unpack .../270-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 717s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 717s Selecting previously unselected package r-cran-xml. 717s Preparing to unpack .../271-r-cran-xml_3.99-0.18-1_arm64.deb ... 717s Unpacking r-cran-xml (3.99-0.18-1) ... 717s Selecting previously unselected package r-cran-bitops. 717s Preparing to unpack .../272-r-cran-bitops_1.0-9-1_arm64.deb ... 717s Unpacking r-cran-bitops (1.0-9-1) ... 717s Selecting previously unselected package r-bioc-rhtslib. 717s Preparing to unpack .../273-r-bioc-rhtslib_3.2.0+dfsg-2_arm64.deb ... 717s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 717s Selecting previously unselected package r-bioc-rsamtools. 717s Preparing to unpack .../274-r-bioc-rsamtools_2.22.0+dfsg-2_arm64.deb ... 717s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 717s Selecting previously unselected package r-bioc-summarizedexperiment. 717s Preparing to unpack .../275-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 717s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 717s Selecting previously unselected package r-bioc-genomicalignments. 717s Preparing to unpack .../276-r-bioc-genomicalignments_1.42.0-2_arm64.deb ... 717s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 717s Selecting previously unselected package r-cran-rcurl. 718s Preparing to unpack .../277-r-cran-rcurl_1.98-1.16+dfsg-1_arm64.deb ... 718s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 718s Selecting previously unselected package r-cran-rjson. 718s Preparing to unpack .../278-r-cran-rjson_0.2.23-1_arm64.deb ... 718s Unpacking r-cran-rjson (0.2.23-1) ... 718s Selecting previously unselected package r-cran-restfulr. 718s Preparing to unpack .../279-r-cran-restfulr_0.0.15-1_arm64.deb ... 718s Unpacking r-cran-restfulr (0.0.15-1) ... 718s Selecting previously unselected package r-bioc-rtracklayer. 718s Preparing to unpack .../280-r-bioc-rtracklayer_1.66.0-2_arm64.deb ... 718s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 718s Selecting previously unselected package r-bioc-bsgenome. 718s Preparing to unpack .../281-r-bioc-bsgenome_1.74.0-2_all.deb ... 718s Unpacking r-bioc-bsgenome (1.74.0-2) ... 718s Selecting previously unselected package r-cran-farver. 718s Preparing to unpack .../282-r-cran-farver_2.1.2-1_arm64.deb ... 718s Unpacking r-cran-farver (2.1.2-1) ... 718s Selecting previously unselected package r-cran-labeling. 718s Preparing to unpack .../283-r-cran-labeling_0.4.3-1_all.deb ... 718s Unpacking r-cran-labeling (0.4.3-1) ... 718s Selecting previously unselected package r-cran-colorspace. 718s Preparing to unpack .../284-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 718s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 718s Selecting previously unselected package r-cran-munsell. 718s Preparing to unpack .../285-r-cran-munsell_0.5.1-1_all.deb ... 718s Unpacking r-cran-munsell (0.5.1-1) ... 718s Selecting previously unselected package r-cran-rcolorbrewer. 718s Preparing to unpack .../286-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 718s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 718s Selecting previously unselected package r-cran-viridislite. 718s Preparing to unpack .../287-r-cran-viridislite_0.4.2-2_all.deb ... 718s Unpacking r-cran-viridislite (0.4.2-2) ... 718s Selecting previously unselected package r-cran-scales. 718s Preparing to unpack .../288-r-cran-scales_1.3.0-1_all.deb ... 718s Unpacking r-cran-scales (1.3.0-1) ... 718s Selecting previously unselected package r-cran-locfit. 718s Preparing to unpack .../289-r-cran-locfit_1.5-9.12-1_arm64.deb ... 718s Unpacking r-cran-locfit (1.5-9.12-1) ... 718s Selecting previously unselected package r-cran-gtools. 718s Preparing to unpack .../290-r-cran-gtools_3.9.5-1_arm64.deb ... 718s Unpacking r-cran-gtools (3.9.5-1) ... 719s Selecting previously unselected package r-cran-data.table. 719s Preparing to unpack .../291-r-cran-data.table_1.17.0+dfsg-1_arm64.deb ... 719s Unpacking r-cran-data.table (1.17.0+dfsg-1) ... 719s Selecting previously unselected package r-cran-r.methodss3. 719s Preparing 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libssh2-1-dev:arm64 (1.11.1-1) ... 722s Setting up libhdf5-310:arm64 (1.14.5+repack-3) ... 722s Setting up cpp-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 722s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 722s Setting up libkadm5srv-mit12:arm64 (1.21.3-4ubuntu2) ... 722s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 722s Setting up libgcc-14-dev:arm64 (14.2.0-17ubuntu3) ... 722s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 722s Setting up libhdf5-fortran-310:arm64 (1.14.5+repack-3) ... 722s Setting up libstdc++-14-dev:arm64 (14.2.0-17ubuntu3) ... 722s Setting up libsm6:arm64 (2:1.2.4-1) ... 722s Setting up krb5-multidev:arm64 (1.21.3-4ubuntu2) ... 722s Setting up libhdf5-cpp-310:arm64 (1.14.5+repack-3) ... 722s Setting up libgfortran-14-dev:arm64 (14.2.0-17ubuntu3) ... 722s Setting up libgnutls28-dev:arm64 (3.8.9-2ubuntu2) ... 722s Setting up libnghttp2-dev:arm64 (1.64.0-1) ... 722s Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 722s Setting up fontconfig (2.15.0-2ubuntu1) ... 724s Regenerating fonts cache... done. 724s Setting up libxft2:arm64 (2.3.6-1build1) ... 724s Setting up libboost1.83-dev:arm64 (1.83.0-4.1ubuntu2) ... 724s Setting up libtk8.6:arm64 (8.6.16-1) ... 725s Setting up libpango-1.0-0:arm64 (1.56.2-1) ... 725s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 725s Setting up libcairo2:arm64 (1.18.2-2) ... 725s Setting up libkrb5-dev:arm64 (1.21.3-4ubuntu2) ... 725s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 725s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 725s Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2build7) ... 725s Setting up cpp-14 (14.2.0-17ubuntu3) ... 725s Setting up cpp (4:14.2.0-1ubuntu1) ... 725s Setting up libboost-dev:arm64 (1.83.0.2ubuntu1) ... 725s Setting up gcc-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 725s Setting up libpangoft2-1.0-0:arm64 (1.56.2-1) ... 725s Setting up libpangocairo-1.0-0:arm64 (1.56.2-1) ... 725s Setting up libhdf5-hl-cpp-310:arm64 (1.14.5+repack-3) ... 725s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 725s Setting up libhdf5-hl-fortran-310:arm64 (1.14.5+repack-3) ... 725s Setting up libxmu6:arm64 (2:1.1.3-3build2) ... 725s Setting up g++-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 725s Setting up libxaw7:arm64 (2:1.0.16-1) ... 725s Setting up gcc-14 (14.2.0-17ubuntu3) ... 725s Setting up libcurl4-openssl-dev:arm64 (8.12.1-3ubuntu1) ... 725s Setting up r-base-core (4.4.3-1) ... 725s Creating config file /etc/R/Renviron with new version 725s Setting up r-cran-crayon (1.5.3-1) ... 725s Setting up libhdf5-dev (1.14.5+repack-3) ... 725s update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 725s Setting up r-cran-labeling (0.4.3-1) ... 725s Setting up r-cran-sourcetools (0.1.7-1-1) ... 725s Setting up r-cran-futile.options (1.0.1-3build1) ... 725s Setting up r-cran-lattice (0.22-6-1) ... 725s Setting up r-cran-ps (1.9.0-1) ... 725s Setting up r-cran-farver (2.1.2-1) ... 725s Setting up r-cran-formatr (1.14-2) ... 725s Setting up r-cran-xml (3.99-0.18-1) ... 725s Setting up r-cran-viridislite (0.4.2-2) ... 725s Setting up r-cran-locfit (1.5-9.12-1) ... 725s Setting up texlive-binaries (2024.20240313.70630+ds-5build2) ... 725s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 725s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 725s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-17ubuntu3) ... 725s Setting up r-cran-statmod (1.5.0-1) ... 725s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 725s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 725s Setting up r-cran-commonmark (1.9.2-2) ... 725s Setting up g++-14 (14.2.0-17ubuntu3) ... 725s Setting up r-cran-rjson (0.2.23-1) ... 725s Setting up r-cran-r6 (2.6.1-1) ... 725s Setting up r-cran-pkgkitten (0.2.4-1) ... 725s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 725s Setting up texlive-base (2024.20250114-1) ... 725s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 726s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 726s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 726s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 727s Setting up r-cran-magrittr (2.0.3-1) ... 727s Setting up r-cran-rappdirs (0.3.3-1) ... 727s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 727s Setting up r-cran-littler (0.3.20-2) ... 727s Setting up r-cran-permute (0.9-7-1) ... 727s Setting up r-cran-bh (1.84.0-1) ... 727s Setting up r-cran-fs (1.6.5+dfsg-1) ... 727s Setting up r-cran-rcpp (1.0.14-1) ... 727s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 727s Setting up r-cran-codetools (0.2-20-1) ... 727s Setting up r-cran-brio (1.1.5-1) ... 727s Setting up r-cran-diffobj (0.3.5-1) ... 727s Setting up r-bioc-biocgenerics (0.52.0-2) ... 727s Setting up r-cran-rlang (1.1.5-1) ... 727s Setting up r-cran-matrixstats (1.5.0-1) ... 727s Setting up littler (0.3.20-2) ... 727s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 727s Setting up r-cran-xfun (0.51+dfsg-1) ... 727s Setting up r-cran-sys (3.4.3-1) ... 727s Setting up r-cran-withr (3.0.2+dfsg-1) ... 727s Setting up r-cran-backports (1.5.0-2) ... 727s Setting up r-cran-processx (3.8.6-1) ... 727s Setting up r-cran-mime (0.12-2) ... 727s Setting up r-cran-praise (1.0.0-4build1) ... 727s Setting up r-cran-base64enc (0.1-3-3) ... 727s Setting up r-cran-iterators (1.0.14-1) ... 727s Setting up r-cran-abind (1.4-8-1) ... 727s Setting up r-cran-digest (0.6.37-1) ... 727s Setting up r-cran-yaml (2.3.10-1) ... 727s Setting up r-cran-lambda.r (1.2.4-2build1) ... 727s Setting up r-cran-evaluate (1.0.3-1) ... 727s Setting up r-cran-highr (0.11+dfsg-1) ... 727s Setting up r-cran-foreach (1.5.2-1) ... 727s Setting up r-cran-prettyunits (1.2.0-1) ... 727s Setting up r-bioc-rhdf5lib (1.28.0+dfsg-2build1) ... 727s Setting up r-cran-checkmate (2.3.2-1) ... 727s Setting up r-cran-snow (1:0.4.4-2) ... 727s Setting up r-cran-gtools (3.9.5-1) ... 727s Setting up r-cran-data.table (1.17.0+dfsg-1) ... 727s Setting up r-cran-glue (1.8.0-1) ... 727s Setting up r-bioc-rhdf5filters (1.18.0+dfsg-2) ... 727s Setting up r-cran-xtable (1:1.8-4-2) ... 727s Setting up r-cran-cli (3.6.4-1) ... 727s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 727s Setting up r-cran-bitops (1.0-9-1) ... 727s Setting up r-bioc-biocversion (3.20.0-2) ... 727s Setting up r-cran-rprojroot (2.0.4-2) ... 727s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... 727s Setting up gcc (4:14.2.0-1ubuntu1) ... 727s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 727s Setting up r-cran-askpass (1.2.1-1) ... 727s Setting up r-cran-fastmap (1.2.0-1) ... 727s Setting up r-cran-r.methodss3 (1.8.2-1) ... 727s Setting up r-bioc-biobase (2.66.0-2) ... 727s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 727s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 727s Setting up r-cran-brew (1.0-10-1) ... 727s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 727s Setting up r-cran-stringi (1.8.4-1build1) ... 727s Setting up texlive-latex-base (2024.20250114-1) ... 727s Setting up r-cran-cpp11 (0.5.2-1) ... 727s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 727s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 727s Setting up r-cran-futile.logger (1.4.3-4build1) ... 727s Setting up r-cran-waldo (0.6.1-2) ... 727s Setting up r-bioc-limma (3.62.2+dfsg-1) ... 727s Setting up r-cran-later (1.4.1+dfsg-1) ... 727s Setting up r-cran-matrix (1.7-3-1) ... 727s Setting up r-cran-doparallel (1.0.17-1) ... 727s Setting up r-cran-htmltools (0.5.8.1-1) ... 727s Setting up r-cran-tinytex (0.56-1) ... 727s Setting up r-cran-knitr (1.49+dfsg-1) ... 727s Setting up g++ (4:14.2.0-1ubuntu1) ... 727s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 727s Setting up r-cran-cachem (1.1.0-1) ... 727s Setting up r-cran-sass (0.4.9+dfsg-1) ... 727s Setting up build-essential (12.10ubuntu1) ... 727s Setting up r-bioc-iranges (2.40.1-2) ... 727s Setting up r-bioc-assorthead (1.0.1+ds-2) ... 727s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 727s Setting up r-cran-restfulr (0.0.15-1) ... 727s Setting up r-bioc-sparsematrixstats (1.18.0+dfsg-2) ... 727s Setting up r-cran-vctrs (0.6.5-1) ... 727s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 727s Setting up r-cran-base64url (1.4-2build1) ... 727s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 727s Setting up r-bioc-biocparallel (1.40.0-2) ... 727s Setting up r-cran-callr (3.7.6-1) ... 727s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 727s Setting up r-cran-desc (1.4.3-1) ... 727s Setting up r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 727s Setting up r-cran-munsell (0.5.1-1) ... 727s Setting up r-cran-fontawesome (0.5.3-1) ... 727s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 727s Setting up r-cran-r.oo (1.27.0-1) ... 727s Setting up gfortran (4:14.2.0-1ubuntu1) ... 727s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 727s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 727s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 727s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 727s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 727s Setting up texlive-bibtex-extra (2024.20250114-1) ... 727s Setting up r-cran-httr (1.4.7+dfsg-1) ... 727s Setting up r-cran-hms (1.1.3-1) ... 727s Setting up r-cran-scales (1.3.0-1) ... 727s Setting up r-cran-memoise (2.0.1-1) ... 727s Setting up r-cran-promises (1.3.2+dfsg-1) ... 727s Setting up r-bioc-xvector (0.46.0-2) ... 727s Setting up r-cran-pkgbuild (1.4.6-1) ... 727s Setting up r-cran-progress (1.2.3-1) ... 727s Setting up r-cran-pkgload (1.4.0-1) ... 727s Setting up r-cran-r.utils (2.13.0-1) ... 727s Setting up r-base-dev (4.4.3-1) ... 727s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 727s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 727s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 727s Setting up r-cran-testthat (3.2.3-1) ... 727s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 727s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 727s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 727s Setting up r-cran-batchtools (0.9.17+dfsg-1) ... 727s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 727s Setting up r-bioc-hdf5array (1.34.0-2build1) ... 727s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 727s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 727s Setting up r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 727s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 727s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 727s Setting up r-bioc-beachmat (2.22.0+ds-2) ... 727s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 727s Setting up r-cran-bookdown (0.42+dfsg-1) ... 727s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 727s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 727s Setting up r-bioc-genomicalignments (1.42.0-2) ... 727s Setting up r-bioc-rtracklayer (1.66.0-2) ... 727s Setting up r-bioc-bsgenome (1.74.0-2) ... 727s Setting up r-bioc-bsseq (1.42.0+dfsg-2) ... 727s Processing triggers for libc-bin (2.41-1ubuntu2) ... 727s Processing triggers for man-db (2.13.0-1) ... 729s Processing triggers for install-info (7.1.1-1) ... 729s Processing triggers for tex-common (6.19) ... 730s Running updmap-sys. This may take some time... done. 730s Running mktexlsr /var/lib/texmf ... done. 730s Building format(s) --all. 769s This may take some time... done. 770s autopkgtest [15:17:31]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 770s autopkgtest [15:17:31]: test pkg-r-autopkgtest: [----------------------- 771s Test: Try to load the R library bsseq 771s 771s R version 4.4.3 (2025-02-28) -- "Trophy Case" 771s Copyright (C) 2025 The R Foundation for Statistical Computing 771s Platform: aarch64-unknown-linux-gnu 771s 771s R is free software and comes with ABSOLUTELY NO WARRANTY. 771s You are welcome to redistribute it under certain conditions. 771s Type 'license()' or 'licence()' for distribution details. 771s 771s R is a collaborative project with many contributors. 771s Type 'contributors()' for more information and 771s 'citation()' on how to cite R or R packages in publications. 771s 771s Type 'demo()' for some demos, 'help()' for on-line help, or 771s 'help.start()' for an HTML browser interface to help. 771s Type 'q()' to quit R. 771s 771s > library('bsseq') 771s Loading required package: BiocGenerics 771s 771s Attaching package: ‘BiocGenerics’ 771s 771s The following objects are masked from ‘package:stats’: 771s 771s IQR, mad, sd, var, xtabs 771s 771s The following objects are masked from ‘package:base’: 771s 771s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 771s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 771s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 771s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 771s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 771s table, tapply, union, unique, unsplit, which.max, which.min 771s 771s Loading required package: GenomicRanges 771s Loading required package: stats4 771s Loading required package: S4Vectors 772s 772s Attaching package: ‘S4Vectors’ 772s 772s The following object is masked from ‘package:utils’: 772s 772s findMatches 772s 772s The following objects are masked from ‘package:base’: 772s 772s expand.grid, I, unname 772s 772s Loading required package: IRanges 772s Loading required package: GenomeInfoDb 773s Loading required package: SummarizedExperiment 773s Loading required package: MatrixGenerics 773s Loading required package: matrixStats 773s 773s Attaching package: ‘MatrixGenerics’ 773s 773s The following objects are masked from ‘package:matrixStats’: 773s 773s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 773s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 773s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 773s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 773s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 773s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 773s colWeightedMeans, colWeightedMedians, colWeightedSds, 773s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 773s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 773s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 773s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 773s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 773s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 773s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 773s rowWeightedSds, rowWeightedVars 773s 773s Loading required package: Biobase 773s Welcome to Bioconductor 773s 773s Vignettes contain introductory material; view with 773s 'browseVignettes()'. To cite Bioconductor, see 773s 'citation("Biobase")', and for packages 'citation("pkgname")'. 773s 773s 773s Attaching package: ‘Biobase’ 773s 773s The following object is masked from ‘package:MatrixGenerics’: 773s 773s rowMedians 773s 773s The following objects are masked from ‘package:matrixStats’: 773s 773s anyMissing, rowMedians 773s 782s > 782s > 782s Other tests are currently unsupported! 782s They will be progressively added. 782s autopkgtest [15:17:43]: test pkg-r-autopkgtest: -----------------------] 783s pkg-r-autopkgtest PASS 783s autopkgtest [15:17:44]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 783s autopkgtest [15:17:44]: @@@@@@@@@@@@@@@@@@@@ summary 783s pkg-r-autopkgtest PASS 801s nova [W] Using flock in prodstack6-arm64 801s flock: timeout while waiting to get lock 801s Creating nova instance adt-plucky-arm64-r-bioc-bsseq-20250315-150441-juju-7f2275-prod-proposed-migration-environment-2-7d90f037-cb03-491d-afd2-043b325eafec from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 801s nova [W] Timed out waiting for 42e7d42f-5122-4bd9-8c27-e674f282da3b to get deleted.