0s autopkgtest [11:04:40]: starting date and time: 2024-11-13 11:04:40+0000 0s autopkgtest [11:04:40]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [11:04:40]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.f1f0ztor/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade q2-metadata --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-7.secgroup --name adt-plucky-arm64-q2-metadata-20241113-110440-juju-7f2275-prod-proposed-migration-environment-20-0df9c633-1dd5-4239-ad50-fc524e0707b1 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 85s autopkgtest [11:06:05]: testbed dpkg architecture: arm64 86s autopkgtest [11:06:06]: testbed apt version: 2.9.8 86s autopkgtest [11:06:06]: @@@@@@@@@@@@@@@@@@@@ test bed setup 87s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 87s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 87s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 87s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 87s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 87s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 87s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 87s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 87s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 87s Fetched 1794 kB in 1s (1880 kB/s) 87s Reading package lists... 90s Reading package lists... 91s Building dependency tree... 91s Reading state information... 91s Calculating upgrade... 92s The following NEW packages will be installed: 92s python3.13-gdbm 92s The following packages will be upgraded: 92s libpython3-stdlib python3 python3-gdbm python3-minimal 92s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 92s Need to get 101 kB of archives. 92s After this operation, 141 kB of additional disk space will be used. 92s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 92s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 92s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 92s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 92s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 93s Fetched 101 kB in 0s (284 kB/s) 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 94s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 94s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 94s Setting up python3-minimal (3.12.7-1) ... 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 94s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 94s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 94s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 94s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 94s Selecting previously unselected package python3.13-gdbm. 94s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 94s Unpacking python3.13-gdbm (3.13.0-2) ... 94s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 94s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 94s Setting up python3.13-gdbm (3.13.0-2) ... 94s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 94s Setting up python3 (3.12.7-1) ... 95s Setting up python3-gdbm:arm64 (3.12.7-1) ... 95s Processing triggers for man-db (2.12.1-3) ... 96s Reading package lists... 96s Building dependency tree... 96s Reading state information... 98s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 98s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 98s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 98s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 98s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 100s Reading package lists... 100s Reading package lists... 100s Building dependency tree... 100s Reading state information... 102s Calculating upgrade... 103s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 103s Reading package lists... 104s Building dependency tree... 104s Reading state information... 105s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 109s autopkgtest [11:06:29]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 109s autopkgtest [11:06:29]: @@@@@@@@@@@@@@@@@@@@ apt-source q2-metadata 111s Get:1 http://ftpmaster.internal/ubuntu plucky/universe q2-metadata 2024.5.0+dfsg-1build1 (dsc) [2413 B] 111s Get:2 http://ftpmaster.internal/ubuntu plucky/universe q2-metadata 2024.5.0+dfsg-1build1 (tar) [230 kB] 111s Get:3 http://ftpmaster.internal/ubuntu plucky/universe q2-metadata 2024.5.0+dfsg-1build1 (diff) [7828 B] 111s gpgv: Signature made Thu Jul 11 06:37:57 2024 UTC 111s gpgv: using RSA key 92978A6E195E4921825F7FF0F34F09744E9F5DD9 111s gpgv: Can't check signature: No public key 111s dpkg-source: warning: cannot verify inline signature for ./q2-metadata_2024.5.0+dfsg-1build1.dsc: no acceptable signature found 111s autopkgtest [11:06:31]: testing package q2-metadata version 2024.5.0+dfsg-1build1 111s autopkgtest [11:06:31]: build not needed 112s autopkgtest [11:06:32]: test run-unit-test: preparing testbed 114s Reading package lists... 114s Building dependency tree... 114s Reading state information... 114s Starting pkgProblemResolver with broken count: 0 114s Starting 2 pkgProblemResolver with broken count: 0 114s Done 115s The following additional packages will be installed: 115s fonts-glyphicons-halflings javascript-common libaec0 libblas3 libgfortran5 115s libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 libjs-bootstrap libjs-jquery 115s libjs-jquery-datatables libjs-jquery-hotkeys libjs-jquery-isonscreen 115s libjs-jquery-metadata libjs-jquery-tablesorter 115s libjs-jquery-throttle-debounce libjs-popper.js liblapack3 liblbfgsb0 liblzf1 115s libnorm1t64 libopenblas0 libopenblas0-pthread libpgm-5.3-0t64 115s libpython3.13-minimal libpython3.13-stdlib libsodium23 libssw0 libsz2 115s libxslt1.1 libyajl2 libzmq5 node-fortawesome-fontawesome-free 115s node-normalize.css python3-all python3-bibtexparser python3-biom-format 115s python3-click python3-colorama python3-coverage python3-dateutil 115s python3-decorator python3-dill python3-filelock python3-flask 115s python3-flask-sqlalchemy python3-flufl.lock python3-globus-sdk 115s python3-greenlet python3-h5py python3-h5py-serial python3-hdmedians 115s python3-ijson python3-iniconfig python3-itsdangerous python3-lxml 115s python3-natsort python3-networkx python3-numpy python3-packaging 115s python3-pandas python3-pandas-lib python3-parsl python3-patsy 115s python3-platformdirs python3-pluggy python3-psutil python3-public python3-py 115s python3-pytest python3-pytest-cov python3-scipy python3-setproctitle 115s python3-six python3-skbio python3-sqlalchemy python3-statsmodels 115s python3-statsmodels-lib python3-tblib python3-tomlkit python3-tz 115s python3-tzlocal python3-werkzeug python3-zmq python3.13 python3.13-minimal 115s q2-metadata q2-quality-filter q2-types q2templates qiime 115s Suggested packages: 115s apache2 | lighttpd | httpd libjs-html5shiv python-biom-format-doc 115s python-coverage-doc python3-objgraph python3-dotenv python-flask-doc 115s python-flufl.lock-doc python-greenlet-dev python-greenlet-doc 115s python-h5py-doc python-lxml-doc python-natsort-doc python3-gdal 115s python3-matplotlib python3-pydot python3-pygraphviz gcc gfortran 115s python-numpy-doc python3-dev python-pandas-doc python-patsy-doc 115s python-public-doc subversion python-scipy-doc python-skbio-doc 115s python-sqlalchemy-doc python3-asyncpg python3-pg8000 python3-psycopg2 115s python3-psycopg2cffi python3-aiosqlite python3-mariadb-connector 115s python3-mysqldb python3-mysql.connector python3-pyodbc python3-pymssql 115s python3-cx-oracle python3-oracledb python-statsmodels-doc ipython3 115s python-werkzeug-doc python3-watchdog python3.13-venv python3.13-doc 115s binfmt-support 115s Recommended packages: 115s node-jquery python3-asgiref python3-simplejson python3-bs4 python3-cssselect 115s python3-html5lib python3-matplotlib python3-bottleneck python3-numexpr 115s python3-odf python3-openpyxl python3-tables r-cran-plotly g++ | c++-compiler 115s python3-pil python3-sqlalchemy-ext python3-joblib python3-cvxopt 115s python3-pyinotify q2cli q2-cutadapt q2-demux q2-feature-classifier 115s q2-feature-table 115s The following NEW packages will be installed: 115s autopkgtest-satdep fonts-glyphicons-halflings javascript-common libaec0 115s libblas3 libgfortran5 libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 115s libjs-bootstrap libjs-jquery libjs-jquery-datatables libjs-jquery-hotkeys 115s libjs-jquery-isonscreen libjs-jquery-metadata libjs-jquery-tablesorter 115s libjs-jquery-throttle-debounce libjs-popper.js liblapack3 liblbfgsb0 liblzf1 115s libnorm1t64 libopenblas0 libopenblas0-pthread libpgm-5.3-0t64 115s libpython3.13-minimal libpython3.13-stdlib libsodium23 libssw0 libsz2 115s libxslt1.1 libyajl2 libzmq5 node-fortawesome-fontawesome-free 115s node-normalize.css python3-all python3-bibtexparser python3-biom-format 115s python3-click python3-colorama python3-coverage python3-dateutil 115s python3-decorator python3-dill python3-filelock python3-flask 115s python3-flask-sqlalchemy python3-flufl.lock python3-globus-sdk 115s python3-greenlet python3-h5py python3-h5py-serial python3-hdmedians 115s python3-ijson python3-iniconfig python3-itsdangerous python3-lxml 115s python3-natsort python3-networkx python3-numpy python3-packaging 115s python3-pandas python3-pandas-lib python3-parsl python3-patsy 115s python3-platformdirs python3-pluggy python3-psutil python3-public python3-py 115s python3-pytest python3-pytest-cov python3-scipy python3-setproctitle 115s python3-six python3-skbio python3-sqlalchemy python3-statsmodels 115s python3-statsmodels-lib python3-tblib python3-tomlkit python3-tz 115s python3-tzlocal python3-werkzeug python3-zmq python3.13 python3.13-minimal 115s q2-metadata q2-quality-filter q2-types q2templates qiime 115s 0 upgraded, 92 newly installed, 0 to remove and 0 not upgraded. 115s Need to get 79.1 MB/79.1 MB of archives. 115s After this operation, 423 MB of additional disk space will be used. 115s Get:1 /tmp/autopkgtest.lPX4hR/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [724 B] 115s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 116s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 116s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 116s Get:5 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] 116s Get:6 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 116s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 javascript-common all 11+nmu1 [5936 B] 116s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 116s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 116s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 116s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB] 116s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 116s Get:13 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB] 116s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB] 116s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 116s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 116s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-metadata all 12-4 [6582 B] 116s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-4 [192 kB] 116s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 116s Get:20 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 116s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 libopenblas0-pthread arm64 0.3.28+ds-3 [5853 kB] 117s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 117s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 117s Get:24 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 117s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnorm1t64 arm64 1.5.9+dfsg-3.1build1 [150 kB] 117s Get:26 http://ftpmaster.internal/ubuntu plucky/universe arm64 libopenblas0 arm64 0.3.28+ds-3 [6240 B] 117s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpgm-5.3-0t64 arm64 5.3.128~dfsg-2.1build1 [162 kB] 117s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 117s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libsodium23 arm64 1.0.18-1build3 [119 kB] 117s Get:30 http://ftpmaster.internal/ubuntu plucky/universe arm64 libssw0 arm64 1.1-15 [21.8 kB] 117s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libxslt1.1 arm64 1.1.39-0exp1ubuntu1 [167 kB] 117s Get:32 http://ftpmaster.internal/ubuntu plucky/universe arm64 libzmq5 arm64 4.3.5-1build2 [247 kB] 117s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-fortawesome-fontawesome-free all 6.4.2+ds1-1 [1573 kB] 117s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 117s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 117s Get:36 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 117s Get:37 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-bibtexparser all 2.0.0b5+really1.4.1-1 [34.5 kB] 117s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 117s Get:39 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py-serial arm64 3.11.0-5ubuntu1 [1064 kB] 117s Get:40 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py all 3.11.0-5ubuntu1 [7974 B] 117s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-colorama all 0.4.6-4 [32.1 kB] 117s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-click all 8.1.7-2 [79.5 kB] 117s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-six all 1.16.0-7 [13.1 kB] 117s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dateutil all 2.9.0-2 [80.3 kB] 117s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tz all 2024.1-2 [31.4 kB] 117s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pandas-lib arm64 2.2.3+dfsg-5 [4422 kB] 117s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pandas all 2.2.3+dfsg-5 [3112 kB] 117s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 117s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB] 118s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-biom-format arm64 2.1.16-1 [137 kB] 118s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-coverage arm64 7.4.4+dfsg1-0ubuntu2 [148 kB] 118s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-dill all 0.3.9-1 [84.5 kB] 118s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-filelock all 3.16.1-1 [12.8 kB] 118s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-itsdangerous all 2.2.0-1 [15.2 kB] 118s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-werkzeug all 3.0.4-1ubuntu1 [171 kB] 118s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-flask all 3.0.3-1ubuntu1 [83.2 kB] 118s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-greenlet arm64 3.0.3-0ubuntu6 [153 kB] 118s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-sqlalchemy all 2.0.32+ds1-1ubuntu1 [1206 kB] 118s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-flask-sqlalchemy all 3.1.1-2 [30.9 kB] 118s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-psutil arm64 5.9.8-2build2 [196 kB] 118s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-public all 4.1.0-2 [7130 B] 118s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-flufl.lock all 8.1.0-2 [12.5 kB] 118s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-globus-sdk all 3.46.0-1 [266 kB] 118s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-hdmedians arm64 0.14.2-5.1build1 [116 kB] 118s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 118s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lxml arm64 5.3.0-1 [1205 kB] 118s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-natsort all 8.0.2-2 [33.8 kB] 118s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 119s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 119s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-setproctitle arm64 1.3.3-1build2 [18.6 kB] 119s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-tblib all 3.0.0-5 [12.9 kB] 119s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-py all 1.11.0-2 [72.7 kB] 119s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-zmq arm64 24.0.1-5build1 [280 kB] 119s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-parsl all 2024.11.04+ds-1 [277 kB] 119s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-patsy all 0.5.6-1 [181 kB] 119s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-platformdirs all 4.3.6-1 [16.8 kB] 119s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 119s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 119s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 119s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest-cov all 5.0.0-1 [21.3 kB] 119s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-statsmodels-lib arm64 0.14.4+dfsg-1 [1627 kB] 119s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-statsmodels all 0.14.4+dfsg-1 [5010 kB] 119s Get:83 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-skbio arm64 0.6.2-3 [1391 kB] 119s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-tomlkit all 0.13.2-1 [37.6 kB] 119s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-tzlocal all 5.2-1.1 [20.5 kB] 119s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 qiime all 2024.5.0-1ubuntu2 [312 kB] 119s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 q2templates all 2024.5.0+ds-1 [12.0 kB] 119s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libyajl2 arm64 2.1.0-5build1 [19.7 kB] 119s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ijson arm64 3.3.0-1 [36.7 kB] 119s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 q2-types all 2024.5.0-1ubuntu2 [5755 kB] 119s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 q2-quality-filter all 2024.5.0-1ubuntu2 [23.1 kB] 119s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 q2-metadata arm64 2024.5.0+dfsg-1build1 [17.0 kB] 120s Fetched 79.1 MB in 4s (19.2 MB/s) 120s Selecting previously unselected package libpython3.13-minimal:arm64. 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 120s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ... 120s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 120s Selecting previously unselected package python3.13-minimal. 120s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_arm64.deb ... 120s Unpacking python3.13-minimal (3.13.0-2) ... 120s Selecting previously unselected package libjs-jquery. 120s Preparing to unpack .../02-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 120s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 120s Selecting previously unselected package libjs-jquery-hotkeys. 120s Preparing to unpack .../03-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ... 120s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 120s Selecting previously unselected package fonts-glyphicons-halflings. 120s Preparing to unpack .../04-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 120s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 120s Selecting previously unselected package javascript-common. 120s Preparing to unpack .../05-javascript-common_11+nmu1_all.deb ... 120s Unpacking javascript-common (11+nmu1) ... 120s Selecting previously unselected package libaec0:arm64. 120s Preparing to unpack .../06-libaec0_1.1.3-1_arm64.deb ... 120s Unpacking libaec0:arm64 (1.1.3-1) ... 120s Selecting previously unselected package libblas3:arm64. 120s Preparing to unpack .../07-libblas3_3.12.0-3build2_arm64.deb ... 120s Unpacking libblas3:arm64 (3.12.0-3build2) ... 120s Selecting previously unselected package libgfortran5:arm64. 120s Preparing to unpack .../08-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 120s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 120s Selecting previously unselected package libgomp1:arm64. 121s Preparing to unpack .../09-libgomp1_14.2.0-8ubuntu1_arm64.deb ... 121s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ... 121s Selecting previously unselected package libsz2:arm64. 121s Preparing to unpack .../10-libsz2_1.1.3-1_arm64.deb ... 121s Unpacking libsz2:arm64 (1.1.3-1) ... 121s Selecting previously unselected package libhdf5-103-1t64:arm64. 121s Preparing to unpack .../11-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 121s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 121s Selecting previously unselected package libhdf5-hl-100t64:arm64. 121s Preparing to unpack .../12-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_arm64.deb ... 121s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 121s Selecting previously unselected package libjs-bootstrap. 121s Preparing to unpack .../13-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 121s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 121s Selecting previously unselected package libjs-jquery-datatables. 121s Preparing to unpack .../14-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 121s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 121s Selecting previously unselected package libjs-jquery-metadata. 121s Preparing to unpack .../15-libjs-jquery-metadata_12-4_all.deb ... 121s Unpacking libjs-jquery-metadata (12-4) ... 121s Selecting previously unselected package libjs-jquery-tablesorter. 121s Preparing to unpack .../16-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-4_all.deb ... 121s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 121s Selecting previously unselected package libjs-jquery-throttle-debounce. 121s Preparing to unpack .../17-libjs-jquery-throttle-debounce_1.1+dfsg.1-2_all.deb ... 121s Unpacking libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 121s Selecting previously unselected package libjs-popper.js. 121s Preparing to unpack .../18-libjs-popper.js_1.16.1+ds-6_all.deb ... 121s Unpacking libjs-popper.js (1.16.1+ds-6) ... 121s Selecting previously unselected package libopenblas0-pthread:arm64. 121s Preparing to unpack .../19-libopenblas0-pthread_0.3.28+ds-3_arm64.deb ... 121s Unpacking libopenblas0-pthread:arm64 (0.3.28+ds-3) ... 121s Selecting previously unselected package liblapack3:arm64. 121s Preparing to unpack .../20-liblapack3_3.12.0-3build2_arm64.deb ... 121s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 121s Selecting previously unselected package liblbfgsb0:arm64. 121s Preparing to unpack .../21-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ... 121s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 121s Selecting previously unselected package liblzf1:arm64. 121s Preparing to unpack .../22-liblzf1_3.6-4_arm64.deb ... 121s Unpacking liblzf1:arm64 (3.6-4) ... 122s Selecting previously unselected package libnorm1t64:arm64. 122s Preparing to unpack .../23-libnorm1t64_1.5.9+dfsg-3.1build1_arm64.deb ... 122s Unpacking libnorm1t64:arm64 (1.5.9+dfsg-3.1build1) ... 122s Selecting previously unselected package libopenblas0:arm64. 122s Preparing to unpack .../24-libopenblas0_0.3.28+ds-3_arm64.deb ... 122s Unpacking libopenblas0:arm64 (0.3.28+ds-3) ... 122s Selecting previously unselected package libpgm-5.3-0t64:arm64. 122s Preparing to unpack .../25-libpgm-5.3-0t64_5.3.128~dfsg-2.1build1_arm64.deb ... 122s Unpacking libpgm-5.3-0t64:arm64 (5.3.128~dfsg-2.1build1) ... 122s Selecting previously unselected package libpython3.13-stdlib:arm64. 122s Preparing to unpack .../26-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 122s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 122s Selecting previously unselected package libsodium23:arm64. 122s Preparing to unpack .../27-libsodium23_1.0.18-1build3_arm64.deb ... 122s Unpacking libsodium23:arm64 (1.0.18-1build3) ... 122s Selecting previously unselected package libssw0:arm64. 122s Preparing to unpack .../28-libssw0_1.1-15_arm64.deb ... 122s Unpacking libssw0:arm64 (1.1-15) ... 122s Selecting previously unselected package libxslt1.1:arm64. 122s Preparing to unpack .../29-libxslt1.1_1.1.39-0exp1ubuntu1_arm64.deb ... 122s Unpacking libxslt1.1:arm64 (1.1.39-0exp1ubuntu1) ... 122s Selecting previously unselected package libzmq5:arm64. 122s Preparing to unpack .../30-libzmq5_4.3.5-1build2_arm64.deb ... 122s Unpacking libzmq5:arm64 (4.3.5-1build2) ... 122s Selecting previously unselected package node-fortawesome-fontawesome-free. 122s Preparing to unpack .../31-node-fortawesome-fontawesome-free_6.4.2+ds1-1_all.deb ... 122s Unpacking node-fortawesome-fontawesome-free (6.4.2+ds1-1) ... 122s Selecting previously unselected package node-normalize.css. 122s Preparing to unpack .../32-node-normalize.css_8.0.1-5_all.deb ... 122s Unpacking node-normalize.css (8.0.1-5) ... 122s Selecting previously unselected package python3.13. 122s Preparing to unpack .../33-python3.13_3.13.0-2_arm64.deb ... 122s Unpacking python3.13 (3.13.0-2) ... 122s Selecting previously unselected package python3-all. 122s Preparing to unpack .../34-python3-all_3.12.7-1_arm64.deb ... 122s Unpacking python3-all (3.12.7-1) ... 122s Selecting previously unselected package python3-bibtexparser. 122s Preparing to unpack .../35-python3-bibtexparser_2.0.0b5+really1.4.1-1_all.deb ... 122s Unpacking python3-bibtexparser (2.0.0b5+really1.4.1-1) ... 122s Selecting previously unselected package python3-numpy. 122s Preparing to unpack .../36-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 122s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 123s Selecting previously unselected package python3-h5py-serial. 123s Preparing to unpack .../37-python3-h5py-serial_3.11.0-5ubuntu1_arm64.deb ... 123s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 123s Selecting previously unselected package python3-h5py. 123s Preparing to unpack .../38-python3-h5py_3.11.0-5ubuntu1_all.deb ... 123s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 123s Selecting previously unselected package python3-colorama. 123s Preparing to unpack .../39-python3-colorama_0.4.6-4_all.deb ... 123s Unpacking python3-colorama (0.4.6-4) ... 123s Selecting previously unselected package python3-click. 123s Preparing to unpack .../40-python3-click_8.1.7-2_all.deb ... 123s Unpacking python3-click (8.1.7-2) ... 123s Selecting previously unselected package python3-six. 123s Preparing to unpack .../41-python3-six_1.16.0-7_all.deb ... 123s Unpacking python3-six (1.16.0-7) ... 123s Selecting previously unselected package python3-dateutil. 123s Preparing to unpack .../42-python3-dateutil_2.9.0-2_all.deb ... 123s Unpacking python3-dateutil (2.9.0-2) ... 123s Selecting previously unselected package python3-tz. 123s Preparing to unpack .../43-python3-tz_2024.1-2_all.deb ... 123s Unpacking python3-tz (2024.1-2) ... 123s Selecting previously unselected package python3-pandas-lib:arm64. 123s Preparing to unpack .../44-python3-pandas-lib_2.2.3+dfsg-5_arm64.deb ... 123s Unpacking python3-pandas-lib:arm64 (2.2.3+dfsg-5) ... 123s Selecting previously unselected package python3-pandas. 123s Preparing to unpack .../45-python3-pandas_2.2.3+dfsg-5_all.deb ... 123s Unpacking python3-pandas (2.2.3+dfsg-5) ... 123s Selecting previously unselected package python3-decorator. 123s Preparing to unpack .../46-python3-decorator_5.1.1-5_all.deb ... 123s Unpacking python3-decorator (5.1.1-5) ... 123s Selecting previously unselected package python3-scipy. 123s Preparing to unpack .../47-python3-scipy_1.13.1-5_arm64.deb ... 123s Unpacking python3-scipy (1.13.1-5) ... 124s Selecting previously unselected package python3-biom-format. 124s Preparing to unpack .../48-python3-biom-format_2.1.16-1_arm64.deb ... 124s Unpacking python3-biom-format (2.1.16-1) ... 124s Selecting previously unselected package python3-coverage. 124s Preparing to unpack .../49-python3-coverage_7.4.4+dfsg1-0ubuntu2_arm64.deb ... 124s Unpacking python3-coverage (7.4.4+dfsg1-0ubuntu2) ... 124s Selecting previously unselected package python3-dill. 124s Preparing to unpack .../50-python3-dill_0.3.9-1_all.deb ... 124s Unpacking python3-dill (0.3.9-1) ... 124s Selecting previously unselected package python3-filelock. 124s Preparing to unpack .../51-python3-filelock_3.16.1-1_all.deb ... 124s Unpacking python3-filelock (3.16.1-1) ... 124s Selecting previously unselected package python3-itsdangerous. 124s Preparing to unpack .../52-python3-itsdangerous_2.2.0-1_all.deb ... 124s Unpacking python3-itsdangerous (2.2.0-1) ... 124s Selecting previously unselected package python3-werkzeug. 124s Preparing to unpack .../53-python3-werkzeug_3.0.4-1ubuntu1_all.deb ... 124s Unpacking python3-werkzeug (3.0.4-1ubuntu1) ... 124s Selecting previously unselected package python3-flask. 124s Preparing to unpack .../54-python3-flask_3.0.3-1ubuntu1_all.deb ... 124s Unpacking python3-flask (3.0.3-1ubuntu1) ... 124s Selecting previously unselected package python3-greenlet. 124s Preparing to unpack .../55-python3-greenlet_3.0.3-0ubuntu6_arm64.deb ... 124s Unpacking python3-greenlet (3.0.3-0ubuntu6) ... 124s Selecting previously unselected package python3-sqlalchemy. 124s Preparing to unpack .../56-python3-sqlalchemy_2.0.32+ds1-1ubuntu1_all.deb ... 124s Unpacking python3-sqlalchemy (2.0.32+ds1-1ubuntu1) ... 124s Selecting previously unselected package python3-flask-sqlalchemy. 124s Preparing to unpack .../57-python3-flask-sqlalchemy_3.1.1-2_all.deb ... 124s Unpacking python3-flask-sqlalchemy (3.1.1-2) ... 124s Selecting previously unselected package python3-psutil. 124s Preparing to unpack .../58-python3-psutil_5.9.8-2build2_arm64.deb ... 124s Unpacking python3-psutil (5.9.8-2build2) ... 124s Selecting previously unselected package python3-public. 124s Preparing to unpack .../59-python3-public_4.1.0-2_all.deb ... 124s Unpacking python3-public (4.1.0-2) ... 124s Selecting previously unselected package python3-flufl.lock. 125s Preparing to unpack .../60-python3-flufl.lock_8.1.0-2_all.deb ... 125s Unpacking python3-flufl.lock (8.1.0-2) ... 125s Selecting previously unselected package python3-globus-sdk. 125s Preparing to unpack .../61-python3-globus-sdk_3.46.0-1_all.deb ... 125s Unpacking python3-globus-sdk (3.46.0-1) ... 125s Selecting previously unselected package python3-hdmedians. 125s Preparing to unpack .../62-python3-hdmedians_0.14.2-5.1build1_arm64.deb ... 125s Unpacking python3-hdmedians (0.14.2-5.1build1) ... 125s Selecting previously unselected package python3-iniconfig. 125s Preparing to unpack .../63-python3-iniconfig_1.1.1-2_all.deb ... 125s Unpacking python3-iniconfig (1.1.1-2) ... 125s Selecting previously unselected package python3-lxml:arm64. 125s Preparing to unpack .../64-python3-lxml_5.3.0-1_arm64.deb ... 125s Unpacking python3-lxml:arm64 (5.3.0-1) ... 125s Selecting previously unselected package python3-natsort. 125s Preparing to unpack .../65-python3-natsort_8.0.2-2_all.deb ... 125s Unpacking python3-natsort (8.0.2-2) ... 125s Selecting previously unselected package python3-networkx. 125s Preparing to unpack .../66-python3-networkx_3.2.1-4ubuntu1_all.deb ... 125s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 125s Selecting previously unselected package python3-packaging. 125s Preparing to unpack .../67-python3-packaging_24.1-1_all.deb ... 125s Unpacking python3-packaging (24.1-1) ... 125s Selecting previously unselected package python3-setproctitle:arm64. 125s Preparing to unpack .../68-python3-setproctitle_1.3.3-1build2_arm64.deb ... 125s Unpacking python3-setproctitle:arm64 (1.3.3-1build2) ... 125s Selecting previously unselected package python3-tblib. 126s Preparing to unpack .../69-python3-tblib_3.0.0-5_all.deb ... 126s Unpacking python3-tblib (3.0.0-5) ... 126s Selecting previously unselected package python3-py. 126s Preparing to unpack .../70-python3-py_1.11.0-2_all.deb ... 126s Unpacking python3-py (1.11.0-2) ... 126s Selecting previously unselected package python3-zmq. 126s Preparing to unpack .../71-python3-zmq_24.0.1-5build1_arm64.deb ... 126s Unpacking python3-zmq (24.0.1-5build1) ... 126s Selecting previously unselected package python3-parsl. 126s Preparing to unpack .../72-python3-parsl_2024.11.04+ds-1_all.deb ... 126s Unpacking python3-parsl (2024.11.04+ds-1) ... 126s Selecting previously unselected package python3-patsy. 126s Preparing to unpack .../73-python3-patsy_0.5.6-1_all.deb ... 126s Unpacking python3-patsy (0.5.6-1) ... 126s Selecting previously unselected package python3-platformdirs. 126s Preparing to unpack .../74-python3-platformdirs_4.3.6-1_all.deb ... 126s Unpacking python3-platformdirs (4.3.6-1) ... 126s Selecting previously unselected package python3-pluggy. 126s Preparing to unpack .../75-python3-pluggy_1.5.0-1_all.deb ... 126s Unpacking python3-pluggy (1.5.0-1) ... 126s Selecting previously unselected package python3-pytest. 126s Preparing to unpack .../76-python3-pytest_8.3.3-1_all.deb ... 126s Unpacking python3-pytest (8.3.3-1) ... 126s Selecting previously unselected package libjs-jquery-isonscreen. 126s Preparing to unpack .../77-libjs-jquery-isonscreen_1.2.0-1.1_all.deb ... 126s Unpacking libjs-jquery-isonscreen (1.2.0-1.1) ... 126s Selecting previously unselected package python3-pytest-cov. 126s Preparing to unpack .../78-python3-pytest-cov_5.0.0-1_all.deb ... 126s Unpacking python3-pytest-cov (5.0.0-1) ... 126s Selecting previously unselected package python3-statsmodels-lib:arm64. 126s Preparing to unpack .../79-python3-statsmodels-lib_0.14.4+dfsg-1_arm64.deb ... 126s Unpacking python3-statsmodels-lib:arm64 (0.14.4+dfsg-1) ... 126s Selecting previously unselected package python3-statsmodels. 126s Preparing to unpack .../80-python3-statsmodels_0.14.4+dfsg-1_all.deb ... 126s Unpacking python3-statsmodels (0.14.4+dfsg-1) ... 126s Selecting previously unselected package python3-skbio. 126s Preparing to unpack .../81-python3-skbio_0.6.2-3_arm64.deb ... 126s Unpacking python3-skbio (0.6.2-3) ... 127s Selecting previously unselected package python3-tomlkit. 127s Preparing to unpack .../82-python3-tomlkit_0.13.2-1_all.deb ... 127s Unpacking python3-tomlkit (0.13.2-1) ... 127s Selecting previously unselected package python3-tzlocal. 127s Preparing to unpack .../83-python3-tzlocal_5.2-1.1_all.deb ... 127s Unpacking python3-tzlocal (5.2-1.1) ... 127s Selecting previously unselected package qiime. 127s Preparing to unpack .../84-qiime_2024.5.0-1ubuntu2_all.deb ... 127s Unpacking qiime (2024.5.0-1ubuntu2) ... 127s Selecting previously unselected package q2templates. 127s Preparing to unpack .../85-q2templates_2024.5.0+ds-1_all.deb ... 127s Unpacking q2templates (2024.5.0+ds-1) ... 127s Selecting previously unselected package libyajl2:arm64. 127s Preparing to unpack .../86-libyajl2_2.1.0-5build1_arm64.deb ... 127s Unpacking libyajl2:arm64 (2.1.0-5build1) ... 127s Selecting previously unselected package python3-ijson. 127s Preparing to unpack .../87-python3-ijson_3.3.0-1_arm64.deb ... 127s Unpacking python3-ijson (3.3.0-1) ... 127s Selecting previously unselected package q2-types. 127s Preparing to unpack .../88-q2-types_2024.5.0-1ubuntu2_all.deb ... 127s Unpacking q2-types (2024.5.0-1ubuntu2) ... 127s Selecting previously unselected package q2-quality-filter. 127s Preparing to unpack .../89-q2-quality-filter_2024.5.0-1ubuntu2_all.deb ... 127s Unpacking q2-quality-filter (2024.5.0-1ubuntu2) ... 127s Selecting previously unselected package q2-metadata. 127s Preparing to unpack .../90-q2-metadata_2024.5.0+dfsg-1build1_arm64.deb ... 127s Unpacking q2-metadata (2024.5.0+dfsg-1build1) ... 127s Selecting previously unselected package autopkgtest-satdep. 127s Preparing to unpack .../91-1-autopkgtest-satdep.deb ... 127s Unpacking autopkgtest-satdep (0) ... 127s Setting up javascript-common (11+nmu1) ... 127s Setting up python3-iniconfig (1.1.1-2) ... 128s Setting up libnorm1t64:arm64 (1.5.9+dfsg-3.1build1) ... 128s Setting up python3-filelock (3.16.1-1) ... 128s Setting up libsodium23:arm64 (1.0.18-1build3) ... 128s Setting up python3-tblib (3.0.0-5) ... 128s Setting up python3-py (1.11.0-2) ... 128s Setting up libjs-popper.js (1.16.1+ds-6) ... 128s Setting up python3-colorama (0.4.6-4) ... 129s Setting up python3-public (4.1.0-2) ... 129s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 129s Setting up libyajl2:arm64 (2.1.0-5build1) ... 129s Setting up python3-itsdangerous (2.2.0-1) ... 129s Setting up python3-coverage (7.4.4+dfsg1-0ubuntu2) ... 129s Setting up node-fortawesome-fontawesome-free (6.4.2+ds1-1) ... 129s Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 129s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ... 129s Setting up python3-click (8.1.7-2) ... 130s Setting up python3-networkx (3.2.1-4ubuntu1) ... 133s Setting up libaec0:arm64 (1.1.3-1) ... 133s Setting up python3-platformdirs (4.3.6-1) ... 133s Setting up python3-psutil (5.9.8-2build2) ... 134s Setting up python3-tz (2024.1-2) ... 134s Setting up python3-natsort (8.0.2-2) ... 134s Setting up python3-flufl.lock (8.1.0-2) ... 134s Setting up python3-six (1.16.0-7) ... 135s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 135s Setting up libpgm-5.3-0t64:arm64 (5.3.128~dfsg-2.1build1) ... 135s Setting up python3-decorator (5.1.1-5) ... 135s Setting up libblas3:arm64 (3.12.0-3build2) ... 135s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 135s Setting up python3-packaging (24.1-1) ... 135s Setting up python3-dill (0.3.9-1) ... 135s Setting up liblzf1:arm64 (3.6-4) ... 135s Setting up python3-greenlet (3.0.3-0ubuntu6) ... 136s Setting up python3-setproctitle:arm64 (1.3.3-1build2) ... 136s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 136s Setting up python3-pluggy (1.5.0-1) ... 136s Setting up libxslt1.1:arm64 (1.1.39-0exp1ubuntu1) ... 136s Setting up python3.13-minimal (3.13.0-2) ... 137s Setting up python3-dateutil (2.9.0-2) ... 137s Setting up python3-bibtexparser (2.0.0b5+really1.4.1-1) ... 138s /usr/lib/python3/dist-packages/bibtexparser/latexenc.py:93: SyntaxWarning: invalid escape sequence '\g' 138s string = re.sub('([^{]|^)([A-Z])([^}]|$)', '\g<1>{\g<2>}\g<3>', string) 138s /usr/lib/python3/dist-packages/bibtexparser/latexenc.py:93: SyntaxWarning: invalid escape sequence '\g' 138s string = re.sub('([^{]|^)([A-Z])([^}]|$)', '\g<1>{\g<2>}\g<3>', string) 138s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 138s Setting up python3-tzlocal (5.2-1.1) ... 138s Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 138s Setting up python3-tomlkit (0.13.2-1) ... 138s Setting up node-normalize.css (8.0.1-5) ... 138s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 138s Setting up libssw0:arm64 (1.1-15) ... 138s Setting up python3-globus-sdk (3.46.0-1) ... 139s Setting up libsz2:arm64 (1.1.3-1) ... 139s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 139s Setting up liblapack3:arm64 (3.12.0-3build2) ... 139s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 139s Setting up libopenblas0-pthread:arm64 (0.3.28+ds-3) ... 139s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 139s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 139s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/aarch64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-aarch64-linux-gnu) in auto mode 139s Setting up libzmq5:arm64 (4.3.5-1build2) ... 139s Setting up python3-ijson (3.3.0-1) ... 139s Setting up python3.13 (3.13.0-2) ... 140s Setting up python3-pytest (8.3.3-1) ... 141s Setting up python3-all (3.12.7-1) ... 141s Setting up python3-sqlalchemy (2.0.32+ds1-1ubuntu1) ... 144s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 144s Setting up python3-werkzeug (3.0.4-1ubuntu1) ... 145s Setting up python3-zmq (24.0.1-5build1) ... 145s Setting up libjs-jquery-metadata (12-4) ... 145s Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... 145s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 149s Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 149s Setting up python3-hdmedians (0.14.2-5.1build1) ... 150s Setting up libopenblas0:arm64 (0.3.28+ds-3) ... 150s Setting up python3-lxml:arm64 (5.3.0-1) ... 150s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 150s Setting up python3-statsmodels-lib:arm64 (0.14.4+dfsg-1) ... 150s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 150s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 150s Setting up python3-scipy (1.13.1-5) ... 158s Setting up python3-flask (3.0.3-1ubuntu1) ... 158s Setting up python3-pandas-lib:arm64 (2.2.3+dfsg-5) ... 158s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 158s Setting up python3-pytest-cov (5.0.0-1) ... 159s Setting up python3-patsy (0.5.6-1) ... 159s Setting up python3-pandas (2.2.3+dfsg-5) ... 171s Setting up python3-h5py (3.11.0-5ubuntu1) ... 171s Setting up python3-statsmodels (0.14.4+dfsg-1) ... 177s Setting up python3-flask-sqlalchemy (3.1.1-2) ... 177s Setting up q2templates (2024.5.0+ds-1) ... 177s Setting up python3-parsl (2024.11.04+ds-1) ... 178s Setting up qiime (2024.5.0-1ubuntu2) ... 179s Setting up python3-biom-format (2.1.16-1) ... 180s Setting up python3-skbio (0.6.2-3) ... 181s Setting up q2-types (2024.5.0-1ubuntu2) ... 182s Setting up q2-quality-filter (2024.5.0-1ubuntu2) ... 182s Setting up q2-metadata (2024.5.0+dfsg-1build1) ... 182s Setting up autopkgtest-satdep (0) ... 182s Processing triggers for systemd (256.5-2ubuntu4) ... 182s Processing triggers for man-db (2.12.1-3) ... 183s Processing triggers for libc-bin (2.40-1ubuntu3) ... 190s (Reading database ... 96957 files and directories currently installed.) 190s Removing autopkgtest-satdep (0) ... 191s autopkgtest [11:07:51]: test run-unit-test: [----------------------- 192s ============================= test session starts ============================== 192s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 192s cachedir: .pytest_cache 192s rootdir: /tmp/autopkgtest.lPX4hR/autopkgtest_tmp 192s plugins: cov-5.0.0, typeguard-4.4.1 193s collecting ... collected 0 items / 5 errors 193s 193s ==================================== ERRORS ==================================== 193s _____________ ERROR collecting q2_metadata/tests/test_distance.py ______________ 193s ImportError while importing test module '/tmp/autopkgtest.lPX4hR/autopkgtest_tmp/q2_metadata/tests/test_distance.py'. 193s Hint: make sure your test modules/packages have valid Python names. 193s Traceback: 193s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 193s return _bootstrap._gcd_import(name[level:], package, level) 193s q2_metadata/__init__.py:9: in 193s from ._tabulate import tabulate 193s q2_metadata/_tabulate.py:13: in 193s import pandas as pd 193s /usr/lib/python3/dist-packages/pandas/__init__.py:19: in 193s raise ImportError( 193s E ImportError: Unable to import required dependencies: 193s E numpy: Error importing numpy: you should not try to import numpy from 193s E its source directory; please exit the numpy source tree, and relaunch 193s E your python interpreter from there. 193s _______________ ERROR collecting q2_metadata/tests/test_merge.py _______________ 193s ImportError while importing test module '/tmp/autopkgtest.lPX4hR/autopkgtest_tmp/q2_metadata/tests/test_merge.py'. 193s Hint: make sure your test modules/packages have valid Python names. 193s Traceback: 193s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 193s return _bootstrap._gcd_import(name[level:], package, level) 193s q2_metadata/__init__.py:9: in 193s from ._tabulate import tabulate 193s q2_metadata/_tabulate.py:13: in 193s import pandas as pd 193s /usr/lib/python3/dist-packages/pandas/__init__.py:19: in 193s raise ImportError( 193s E ImportError: Unable to import required dependencies: 193s E numpy: Error importing numpy: you should not try to import numpy from 193s E its source directory; please exit the numpy source tree, and relaunch 193s E your python interpreter from there. 193s ___________ ERROR collecting q2_metadata/tests/test_plugin_setup.py ____________ 193s ImportError while importing test module '/tmp/autopkgtest.lPX4hR/autopkgtest_tmp/q2_metadata/tests/test_plugin_setup.py'. 193s Hint: make sure your test modules/packages have valid Python names. 193s Traceback: 193s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 193s return _bootstrap._gcd_import(name[level:], package, level) 193s q2_metadata/__init__.py:9: in 193s from ._tabulate import tabulate 193s q2_metadata/_tabulate.py:13: in 193s import pandas as pd 193s /usr/lib/python3/dist-packages/pandas/__init__.py:19: in 193s raise ImportError( 193s E ImportError: Unable to import required dependencies: 193s E numpy: Error importing numpy: you should not try to import numpy from 193s E its source directory; please exit the numpy source tree, and relaunch 193s E your python interpreter from there. 193s ______________ ERROR collecting q2_metadata/tests/test_random.py _______________ 193s ImportError while importing test module '/tmp/autopkgtest.lPX4hR/autopkgtest_tmp/q2_metadata/tests/test_random.py'. 193s Hint: make sure your test modules/packages have valid Python names. 193s Traceback: 193s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 193s return _bootstrap._gcd_import(name[level:], package, level) 193s q2_metadata/__init__.py:9: in 193s from ._tabulate import tabulate 193s q2_metadata/_tabulate.py:13: in 193s import pandas as pd 193s /usr/lib/python3/dist-packages/pandas/__init__.py:19: in 193s raise ImportError( 193s E ImportError: Unable to import required dependencies: 193s E numpy: Error importing numpy: you should not try to import numpy from 193s E its source directory; please exit the numpy source tree, and relaunch 193s E your python interpreter from there. 193s _____________ ERROR collecting q2_metadata/tests/test_tabulate.py ______________ 193s ImportError while importing test module '/tmp/autopkgtest.lPX4hR/autopkgtest_tmp/q2_metadata/tests/test_tabulate.py'. 193s Hint: make sure your test modules/packages have valid Python names. 193s Traceback: 193s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 193s return _bootstrap._gcd_import(name[level:], package, level) 193s q2_metadata/__init__.py:9: in 193s from ._tabulate import tabulate 193s q2_metadata/_tabulate.py:13: in 193s import pandas as pd 193s /usr/lib/python3/dist-packages/pandas/__init__.py:19: in 193s raise ImportError( 193s E ImportError: Unable to import required dependencies: 193s E numpy: Error importing numpy: you should not try to import numpy from 193s E its source directory; please exit the numpy source tree, and relaunch 193s E your python interpreter from there. 193s =============================== warnings summary =============================== 193s q2_metadata/_tabulate.py:10 193s /tmp/autopkgtest.lPX4hR/autopkgtest_tmp/q2_metadata/_tabulate.py:10: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 193s import pkg_resources 193s 193s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 193s 193s ---------- coverage: platform linux, python 3.13.0-final-0 ----------- 193s Name Stmts Miss Cover 193s ------------------------------------------------------------ 193s q2_metadata/__init__.py 8 7 12% 193s q2_metadata/_distance.py 11 11 0% 193s q2_metadata/_merge.py 25 25 0% 193s q2_metadata/_random.py 20 20 0% 193s q2_metadata/_tabulate.py 24 20 17% 193s q2_metadata/_version.py 4 4 0% 193s q2_metadata/plugin_setup.py 37 37 0% 193s q2_metadata/tests/__init__.py 0 0 100% 193s q2_metadata/tests/test_distance.py 28 28 0% 193s q2_metadata/tests/test_merge.py 96 96 0% 193s q2_metadata/tests/test_plugin_setup.py 7 7 0% 193s q2_metadata/tests/test_random.py 81 81 0% 193s q2_metadata/tests/test_tabulate.py 65 65 0% 193s ------------------------------------------------------------ 193s TOTAL 406 401 1% 193s 193s =========================== short test summary info ============================ 193s ERROR q2_metadata/tests/test_distance.py 193s ERROR q2_metadata/tests/test_merge.py 193s ERROR q2_metadata/tests/test_plugin_setup.py 193s ERROR q2_metadata/tests/test_random.py 193s ERROR q2_metadata/tests/test_tabulate.py 193s !!!!!!!!!!!!!!!!!!! Interrupted: 5 errors during collection !!!!!!!!!!!!!!!!!!!! 193s ========================= 1 warning, 5 errors in 1.06s ========================= 193s autopkgtest [11:07:53]: test run-unit-test: -----------------------] 194s run-unit-test FAIL non-zero exit status 2 194s autopkgtest [11:07:54]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 194s autopkgtest [11:07:54]: @@@@@@@@@@@@@@@@@@@@ summary 194s run-unit-test FAIL non-zero exit status 2 211s nova [W] Skipping flock in bos03-arm64 211s Creating nova instance adt-plucky-arm64-q2-metadata-20241113-110440-juju-7f2275-prod-proposed-migration-environment-20-0df9c633-1dd5-4239-ad50-fc524e0707b1 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...