0s autopkgtest [11:01:39]: starting date and time: 2024-11-13 11:01:39+0000 0s autopkgtest [11:01:39]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [11:01:39]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.brfknsht/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-weblogo --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-7.secgroup --name adt-plucky-arm64-python-weblogo-20241113-110139-juju-7f2275-prod-proposed-migration-environment-20-738b53a2-9fc1-43a6-ac72-a129ea049951 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 79s autopkgtest [11:02:58]: testbed dpkg architecture: arm64 79s autopkgtest [11:02:58]: testbed apt version: 2.9.8 79s autopkgtest [11:02:58]: @@@@@@@@@@@@@@@@@@@@ test bed setup 80s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 80s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 80s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 80s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 81s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 81s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 81s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 81s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 81s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 81s Fetched 1794 kB in 1s (2150 kB/s) 81s Reading package lists... 84s Reading package lists... 85s Building dependency tree... 85s Reading state information... 86s Calculating upgrade... 86s The following NEW packages will be installed: 86s python3.13-gdbm 86s The following packages will be upgraded: 86s libpython3-stdlib python3 python3-gdbm python3-minimal 86s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 86s Need to get 101 kB of archives. 86s After this operation, 141 kB of additional disk space will be used. 86s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 87s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 87s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 87s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 87s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 87s Fetched 101 kB in 0s (285 kB/s) 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 87s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 87s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 88s Setting up python3-minimal (3.12.7-1) ... 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 88s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 88s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 88s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 88s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 88s Selecting previously unselected package python3.13-gdbm. 88s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 88s Unpacking python3.13-gdbm (3.13.0-2) ... 88s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 88s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 88s Setting up python3.13-gdbm (3.13.0-2) ... 88s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 88s Setting up python3 (3.12.7-1) ... 88s Setting up python3-gdbm:arm64 (3.12.7-1) ... 88s Processing triggers for man-db (2.12.1-3) ... 89s Reading package lists... 90s Building dependency tree... 90s Reading state information... 92s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 92s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 92s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 92s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 94s Reading package lists... 94s Reading package lists... 94s Building dependency tree... 94s Reading state information... 96s Calculating upgrade... 96s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 96s Reading package lists... 97s Building dependency tree... 97s Reading state information... 98s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 101s autopkgtest [11:03:20]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 101s autopkgtest [11:03:20]: @@@@@@@@@@@@@@@@@@@@ apt-source python-weblogo 103s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-weblogo 3.8.0-1 (dsc) [2220 B] 103s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-weblogo 3.8.0-1 (tar) [935 kB] 103s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-weblogo 3.8.0-1 (diff) [8344 B] 103s gpgv: Signature made Mon Oct 7 06:39:27 2024 UTC 103s gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 103s gpgv: issuer "merkys@debian.org" 103s gpgv: Can't check signature: No public key 103s dpkg-source: warning: cannot verify inline signature for ./python-weblogo_3.8.0-1.dsc: no acceptable signature found 103s autopkgtest [11:03:22]: testing package python-weblogo version 3.8.0-1 104s autopkgtest [11:03:23]: build not needed 105s autopkgtest [11:03:24]: test pybuild-autopkgtest: preparing testbed 110s Reading package lists... 111s Building dependency tree... 111s Reading state information... 111s Starting pkgProblemResolver with broken count: 0 111s Starting 2 pkgProblemResolver with broken count: 0 111s Done 112s The following additional packages will be installed: 112s autoconf automake autopoint autotools-dev build-essential cpp cpp-14 112s cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper debugedit 112s dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config 112s fonts-glyphicons-halflings fonts-urw-base35 g++ g++-14 112s g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 112s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gettext ghostscript help2man 112s intltool-debian libarchive-zip-perl libasan8 libavahi-client3 112s libavahi-common-data libavahi-common3 libblas3 libcc1-0 libcups2t64 112s libdebhelper-perl libdeflate0 libexpat1-dev libfile-stripnondeterminism-perl 112s libfontconfig1 libfontenc1 libgcc-14-dev libgfortran5 libgomp1 libgs-common 112s libgs10 libgs10-common libhwasan0 libice6 libidn12 libijs-0.35 libisl23 112s libitm1 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 112s libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblerc4 112s liblsan0 libmpc3 libopenjp2-7 libpaper1 libpython3-all-dev libpython3-dev 112s libpython3.12-dev libpython3.13 libpython3.13-dev libpython3.13-minimal 112s libpython3.13-stdlib libsharpyuv0 libsm6 libstdc++-14-dev libtiff6 libtool 112s libtsan2 libubsan1 libwebp7 libxt6t64 m4 po-debconf poppler-data 112s pybuild-plugin-autopkgtest python3-all python3-all-dev python3-decorator 112s python3-dev python3-iniconfig python3-numpy python3-packaging python3-pluggy 112s python3-pytest python3-scipy python3-setuptools-scm python3-weblogo 112s python3.12-dev python3.13 python3.13-dev python3.13-minimal x11-common 112s xfonts-encodings xfonts-utils zlib1g-dev 112s Suggested packages: 112s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales 112s cpp-14-doc dh-make flit python3-build python3-installer python3-wheel 112s fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre gcc-14-doc 112s gcc-multilib manpages-dev flex bison gdb gcc-doc gdb-aarch64-linux-gnu 112s gettext-doc libasprintf-dev libgettextpo-dev texlive-binaries cups-common 112s libstdc++-14-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc 112s libmail-box-perl poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho 112s fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 112s fonts-arphic-uming fonts-nanum gfortran python-numpy-doc python-scipy-doc 112s python3.13-venv python3.13-doc binfmt-support 112s Recommended packages: 112s libarchive-cpio-perl fonts-droid-fallback javascript-common libpaper-utils 112s libltdl-dev libmail-sendmail-perl python3-pil 112s The following NEW packages will be installed: 112s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 112s cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper 112s debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz 112s fontconfig-config fonts-glyphicons-halflings fonts-urw-base35 g++ g++-14 112s g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 112s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gettext ghostscript help2man 112s intltool-debian libarchive-zip-perl libasan8 libavahi-client3 112s libavahi-common-data libavahi-common3 libblas3 libcc1-0 libcups2t64 112s libdebhelper-perl libdeflate0 libexpat1-dev libfile-stripnondeterminism-perl 112s libfontconfig1 libfontenc1 libgcc-14-dev libgfortran5 libgomp1 libgs-common 112s libgs10 libgs10-common libhwasan0 libice6 libidn12 libijs-0.35 libisl23 112s libitm1 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 112s libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblerc4 112s liblsan0 libmpc3 libopenjp2-7 libpaper1 libpython3-all-dev libpython3-dev 112s libpython3.12-dev libpython3.13 libpython3.13-dev libpython3.13-minimal 112s libpython3.13-stdlib libsharpyuv0 libsm6 libstdc++-14-dev libtiff6 libtool 112s libtsan2 libubsan1 libwebp7 libxt6t64 m4 po-debconf poppler-data 112s pybuild-plugin-autopkgtest python3-all python3-all-dev python3-decorator 112s python3-dev python3-iniconfig python3-numpy python3-packaging python3-pluggy 112s python3-pytest python3-scipy python3-setuptools-scm python3-weblogo 112s python3.12-dev python3.13 python3.13-dev python3.13-minimal x11-common 112s xfonts-encodings xfonts-utils zlib1g-dev 112s 0 upgraded, 112 newly installed, 0 to remove and 0 not upgraded. 112s Need to get 130 MB/130 MB of archives. 112s After this operation, 472 MB of additional disk space will be used. 112s Get:1 /tmp/autopkgtest.Fv1CGh/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [816 B] 112s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 poppler-data all 0.4.12-1 [2060 kB] 113s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 113s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 113s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 m4 arm64 1.4.19-4build1 [240 kB] 113s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 autoconf all 2.72-3 [382 kB] 113s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 autotools-dev all 20220109.1 [44.9 kB] 113s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 automake all 1:1.16.5-1.3ubuntu1 [558 kB] 113s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 autopoint all 0.22.5-2 [616 kB] 113s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 113s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 113s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [10.6 MB] 113s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-8ubuntu1 [1028 B] 113s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B] 113s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB] 113s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-8ubuntu1 [49.7 kB] 113s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB] 113s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-8ubuntu1 [27.8 kB] 113s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-8ubuntu1 [2893 kB] 113s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-8ubuntu1 [1283 kB] 113s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-8ubuntu1 [2686 kB] 113s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-8ubuntu1 [1151 kB] 113s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-8ubuntu1 [1598 kB] 113s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-8ubuntu1 [2594 kB] 113s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [20.9 MB] 114s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-8ubuntu1 [518 kB] 114s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B] 114s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B] 114s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-8ubuntu1 [2476 kB] 114s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [12.1 MB] 114s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-8ubuntu1 [19.9 kB] 114s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B] 114s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B] 114s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 114s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 114s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libtool all 2.4.7-7build1 [166 kB] 114s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 dh-autoreconf all 20 [16.1 kB] 114s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB] 114s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 114s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 dh-strip-nondeterminism all 1.14.0-1 [5058 B] 114s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 debugedit arm64 1:5.1-1 [45.9 kB] 114s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 dwz arm64 0.15-1build6 [113 kB] 114s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 gettext arm64 0.22.5-2 [930 kB] 114s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] 114s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 po-debconf all 1.0.21+nmu1 [233 kB] 114s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 debhelper all 13.20ubuntu1 [893 kB] 114s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 dh-python all 6.20241024 [112 kB] 114s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontenc1 arm64 1:1.1.8-1build1 [13.9 kB] 114s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 115s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 115s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 xfonts-utils arm64 1:7.7+7 [95.6 kB] 115s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-urw-base35 all 20200910-8 [11.0 MB] 115s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 115s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 115s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libgs-common all 10.03.1~dfsg1-0ubuntu2 [175 kB] 115s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libgs10-common all 10.03.1~dfsg1-0ubuntu2 [488 kB] 115s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common-data arm64 0.8-13ubuntu6 [29.6 kB] 115s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common3 arm64 0.8-13ubuntu6 [23.3 kB] 115s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-client3 arm64 0.8-13ubuntu6 [27.2 kB] 115s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libcups2t64 arm64 2.4.10-1ubuntu2 [271 kB] 115s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 115s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libidn12 arm64 1.42-2 [56.9 kB] 115s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libijs-0.35 arm64 0.35-15.1build1 [15.3 kB] 115s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig2dec0 arm64 0.20-1build3 [63.2 kB] 115s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 115s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 115s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu1 [182 kB] 115s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper1 arm64 1.1.29build1 [13.4 kB] 115s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB] 115s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 115s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 115s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 115s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 115s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 115s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 115s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 115s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 115s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libgs10 arm64 10.03.1~dfsg1-0ubuntu2 [3579 kB] 115s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 ghostscript arm64 10.03.1~dfsg1-0ubuntu2 [43.6 kB] 115s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 help2man arm64 1.49.3 [201 kB] 115s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 115s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libexpat1-dev arm64 2.6.2-2 [128 kB] 115s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 115s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 115s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 115s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 115s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-sphinxdoc all 7.4.7-4 [158 kB] 115s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 115s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 115s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 115s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.12-dev arm64 3.12.7-3 [5565 kB] 116s Get:92 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-dev arm64 3.12.7-1 [10.3 kB] 116s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 116s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13 arm64 3.13.0-2 [2262 kB] 116s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-dev arm64 3.13.0-2 [5386 kB] 116s Get:96 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-all-dev arm64 3.12.7-1 [916 B] 116s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 116s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 116s Get:99 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 116s Get:100 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-dev arm64 3.12.7-3 [505 kB] 116s Get:101 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-dev arm64 3.12.7-1 [26.7 kB] 116s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-dev arm64 3.13.0-2 [507 kB] 116s Get:103 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all-dev arm64 3.12.7-1 [914 B] 116s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 116s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 116s Get:106 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 117s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 117s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 117s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 117s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-setuptools-scm all 8.1.0-1 [32.2 kB] 117s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB] 117s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-weblogo all 3.8.0-1 [116 kB] 118s Preconfiguring packages ... 118s Fetched 130 MB in 5s (24.5 MB/s) 118s Selecting previously unselected package poppler-data. 118s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 118s Preparing to unpack .../000-poppler-data_0.4.12-1_all.deb ... 118s Unpacking poppler-data (0.4.12-1) ... 118s Selecting previously unselected package libpython3.13-minimal:arm64. 118s Preparing to unpack .../001-libpython3.13-minimal_3.13.0-2_arm64.deb ... 118s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 118s Selecting previously unselected package python3.13-minimal. 118s Preparing to unpack .../002-python3.13-minimal_3.13.0-2_arm64.deb ... 118s Unpacking python3.13-minimal (3.13.0-2) ... 118s Selecting previously unselected package m4. 118s Preparing to unpack .../003-m4_1.4.19-4build1_arm64.deb ... 118s Unpacking m4 (1.4.19-4build1) ... 118s Selecting previously unselected package autoconf. 118s Preparing to unpack .../004-autoconf_2.72-3_all.deb ... 118s Unpacking autoconf (2.72-3) ... 118s Selecting previously unselected package autotools-dev. 118s Preparing to unpack .../005-autotools-dev_20220109.1_all.deb ... 118s Unpacking autotools-dev (20220109.1) ... 118s Selecting previously unselected package automake. 118s Preparing to unpack .../006-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 118s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 118s Selecting previously unselected package autopoint. 118s Preparing to unpack .../007-autopoint_0.22.5-2_all.deb ... 118s Unpacking autopoint (0.22.5-2) ... 118s Selecting previously unselected package libisl23:arm64. 118s Preparing to unpack .../008-libisl23_0.27-1_arm64.deb ... 118s Unpacking libisl23:arm64 (0.27-1) ... 118s Selecting previously unselected package libmpc3:arm64. 118s Preparing to unpack .../009-libmpc3_1.3.1-1build2_arm64.deb ... 118s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 118s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 118s Preparing to unpack .../010-cpp-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ... 118s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ... 119s Selecting previously unselected package cpp-14. 119s Preparing to unpack .../011-cpp-14_14.2.0-8ubuntu1_arm64.deb ... 119s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 119s Selecting previously unselected package cpp-aarch64-linux-gnu. 119s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 119s Unpacking cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 119s Selecting previously unselected package cpp. 119s Preparing to unpack .../013-cpp_4%3a14.1.0-2ubuntu1_arm64.deb ... 119s Unpacking cpp (4:14.1.0-2ubuntu1) ... 119s Selecting previously unselected package libcc1-0:arm64. 119s Preparing to unpack .../014-libcc1-0_14.2.0-8ubuntu1_arm64.deb ... 119s Unpacking libcc1-0:arm64 (14.2.0-8ubuntu1) ... 119s Selecting previously unselected package libgomp1:arm64. 119s Preparing to unpack .../015-libgomp1_14.2.0-8ubuntu1_arm64.deb ... 119s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ... 119s Selecting previously unselected package libitm1:arm64. 119s Preparing to unpack .../016-libitm1_14.2.0-8ubuntu1_arm64.deb ... 119s Unpacking libitm1:arm64 (14.2.0-8ubuntu1) ... 119s Selecting previously unselected package libasan8:arm64. 119s Preparing to unpack .../017-libasan8_14.2.0-8ubuntu1_arm64.deb ... 119s Unpacking libasan8:arm64 (14.2.0-8ubuntu1) ... 119s Selecting previously unselected package liblsan0:arm64. 119s Preparing to unpack .../018-liblsan0_14.2.0-8ubuntu1_arm64.deb ... 119s Unpacking liblsan0:arm64 (14.2.0-8ubuntu1) ... 119s Selecting previously unselected package libtsan2:arm64. 119s Preparing to unpack .../019-libtsan2_14.2.0-8ubuntu1_arm64.deb ... 119s Unpacking libtsan2:arm64 (14.2.0-8ubuntu1) ... 119s Selecting previously unselected package libubsan1:arm64. 119s Preparing to unpack .../020-libubsan1_14.2.0-8ubuntu1_arm64.deb ... 119s Unpacking libubsan1:arm64 (14.2.0-8ubuntu1) ... 119s Selecting previously unselected package libhwasan0:arm64. 119s Preparing to unpack .../021-libhwasan0_14.2.0-8ubuntu1_arm64.deb ... 119s Unpacking libhwasan0:arm64 (14.2.0-8ubuntu1) ... 120s Selecting previously unselected package libgcc-14-dev:arm64. 120s Preparing to unpack .../022-libgcc-14-dev_14.2.0-8ubuntu1_arm64.deb ... 120s Unpacking libgcc-14-dev:arm64 (14.2.0-8ubuntu1) ... 120s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 120s Preparing to unpack .../023-gcc-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ... 120s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ... 120s Selecting previously unselected package gcc-14. 120s Preparing to unpack .../024-gcc-14_14.2.0-8ubuntu1_arm64.deb ... 120s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 120s Selecting previously unselected package gcc-aarch64-linux-gnu. 120s Preparing to unpack .../025-gcc-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 120s Unpacking gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 120s Selecting previously unselected package gcc. 120s Preparing to unpack .../026-gcc_4%3a14.1.0-2ubuntu1_arm64.deb ... 120s Unpacking gcc (4:14.1.0-2ubuntu1) ... 120s Selecting previously unselected package libstdc++-14-dev:arm64. 120s Preparing to unpack .../027-libstdc++-14-dev_14.2.0-8ubuntu1_arm64.deb ... 120s Unpacking libstdc++-14-dev:arm64 (14.2.0-8ubuntu1) ... 121s Selecting previously unselected package g++-14-aarch64-linux-gnu. 121s Preparing to unpack .../028-g++-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ... 121s Unpacking g++-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ... 121s Selecting previously unselected package g++-14. 121s Preparing to unpack .../029-g++-14_14.2.0-8ubuntu1_arm64.deb ... 121s Unpacking g++-14 (14.2.0-8ubuntu1) ... 121s Selecting previously unselected package g++-aarch64-linux-gnu. 121s Preparing to unpack .../030-g++-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 121s Unpacking g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 121s Selecting previously unselected package g++. 121s Preparing to unpack .../031-g++_4%3a14.1.0-2ubuntu1_arm64.deb ... 121s Unpacking g++ (4:14.1.0-2ubuntu1) ... 121s Selecting previously unselected package build-essential. 121s Preparing to unpack .../032-build-essential_12.10ubuntu1_arm64.deb ... 121s Unpacking build-essential (12.10ubuntu1) ... 121s Selecting previously unselected package libdebhelper-perl. 121s Preparing to unpack .../033-libdebhelper-perl_13.20ubuntu1_all.deb ... 121s Unpacking libdebhelper-perl (13.20ubuntu1) ... 121s Selecting previously unselected package libtool. 121s Preparing to unpack .../034-libtool_2.4.7-7build1_all.deb ... 121s Unpacking libtool (2.4.7-7build1) ... 121s Selecting previously unselected package dh-autoreconf. 121s Preparing to unpack .../035-dh-autoreconf_20_all.deb ... 121s Unpacking dh-autoreconf (20) ... 121s Selecting previously unselected package libarchive-zip-perl. 121s Preparing to unpack .../036-libarchive-zip-perl_1.68-1_all.deb ... 121s Unpacking libarchive-zip-perl (1.68-1) ... 121s Selecting previously unselected package libfile-stripnondeterminism-perl. 121s Preparing to unpack .../037-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 121s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 121s Selecting previously unselected package dh-strip-nondeterminism. 121s Preparing to unpack .../038-dh-strip-nondeterminism_1.14.0-1_all.deb ... 121s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 121s Selecting previously unselected package debugedit. 121s Preparing to unpack .../039-debugedit_1%3a5.1-1_arm64.deb ... 121s Unpacking debugedit (1:5.1-1) ... 121s Selecting previously unselected package dwz. 121s Preparing to unpack .../040-dwz_0.15-1build6_arm64.deb ... 121s Unpacking dwz (0.15-1build6) ... 121s Selecting previously unselected package gettext. 121s Preparing to unpack .../041-gettext_0.22.5-2_arm64.deb ... 121s Unpacking gettext (0.22.5-2) ... 121s Selecting previously unselected package intltool-debian. 121s Preparing to unpack .../042-intltool-debian_0.35.0+20060710.6_all.deb ... 121s Unpacking intltool-debian (0.35.0+20060710.6) ... 121s Selecting previously unselected package po-debconf. 121s Preparing to unpack .../043-po-debconf_1.0.21+nmu1_all.deb ... 121s Unpacking po-debconf (1.0.21+nmu1) ... 121s Selecting previously unselected package debhelper. 122s Preparing to unpack .../044-debhelper_13.20ubuntu1_all.deb ... 122s Unpacking debhelper (13.20ubuntu1) ... 122s Selecting previously unselected package dh-python. 122s Preparing to unpack .../045-dh-python_6.20241024_all.deb ... 122s Unpacking dh-python (6.20241024) ... 122s Selecting previously unselected package libfontenc1:arm64. 122s Preparing to unpack .../046-libfontenc1_1%3a1.1.8-1build1_arm64.deb ... 122s Unpacking libfontenc1:arm64 (1:1.1.8-1build1) ... 122s Selecting previously unselected package x11-common. 122s Preparing to unpack .../047-x11-common_1%3a7.7+23ubuntu3_all.deb ... 122s Unpacking x11-common (1:7.7+23ubuntu3) ... 122s Selecting previously unselected package xfonts-encodings. 122s Preparing to unpack .../048-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 122s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 122s Selecting previously unselected package xfonts-utils. 122s Preparing to unpack .../049-xfonts-utils_1%3a7.7+7_arm64.deb ... 122s Unpacking xfonts-utils (1:7.7+7) ... 122s Selecting previously unselected package fonts-urw-base35. 122s Preparing to unpack .../050-fonts-urw-base35_20200910-8_all.deb ... 122s Unpacking fonts-urw-base35 (20200910-8) ... 122s Selecting previously unselected package fontconfig-config. 122s Preparing to unpack .../051-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 122s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 122s Selecting previously unselected package fonts-glyphicons-halflings. 122s Preparing to unpack .../052-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 122s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 122s Selecting previously unselected package libgs-common. 122s Preparing to unpack .../053-libgs-common_10.03.1~dfsg1-0ubuntu2_all.deb ... 122s Unpacking libgs-common (10.03.1~dfsg1-0ubuntu2) ... 122s Selecting previously unselected package libgs10-common. 122s Preparing to unpack .../054-libgs10-common_10.03.1~dfsg1-0ubuntu2_all.deb ... 122s Unpacking libgs10-common (10.03.1~dfsg1-0ubuntu2) ... 122s Selecting previously unselected package libavahi-common-data:arm64. 122s Preparing to unpack .../055-libavahi-common-data_0.8-13ubuntu6_arm64.deb ... 122s Unpacking libavahi-common-data:arm64 (0.8-13ubuntu6) ... 123s Selecting previously unselected package libavahi-common3:arm64. 123s Preparing to unpack .../056-libavahi-common3_0.8-13ubuntu6_arm64.deb ... 123s Unpacking libavahi-common3:arm64 (0.8-13ubuntu6) ... 123s Selecting previously unselected package libavahi-client3:arm64. 123s Preparing to unpack .../057-libavahi-client3_0.8-13ubuntu6_arm64.deb ... 123s Unpacking libavahi-client3:arm64 (0.8-13ubuntu6) ... 123s Selecting previously unselected package libcups2t64:arm64. 123s Preparing to unpack .../058-libcups2t64_2.4.10-1ubuntu2_arm64.deb ... 123s Unpacking libcups2t64:arm64 (2.4.10-1ubuntu2) ... 123s Selecting previously unselected package libfontconfig1:arm64. 123s Preparing to unpack .../059-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 123s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 123s Selecting previously unselected package libidn12:arm64. 123s Preparing to unpack .../060-libidn12_1.42-2_arm64.deb ... 123s Unpacking libidn12:arm64 (1.42-2) ... 123s Selecting previously unselected package libijs-0.35:arm64. 123s Preparing to unpack .../061-libijs-0.35_0.35-15.1build1_arm64.deb ... 123s Unpacking libijs-0.35:arm64 (0.35-15.1build1) ... 123s Selecting previously unselected package libjbig2dec0:arm64. 123s Preparing to unpack .../062-libjbig2dec0_0.20-1build3_arm64.deb ... 123s Unpacking libjbig2dec0:arm64 (0.20-1build3) ... 123s Selecting previously unselected package libjpeg-turbo8:arm64. 123s Preparing to unpack .../063-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 123s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 123s Selecting previously unselected package libjpeg8:arm64. 123s Preparing to unpack .../064-libjpeg8_8c-2ubuntu11_arm64.deb ... 123s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 123s Selecting previously unselected package libopenjp2-7:arm64. 123s Preparing to unpack .../065-libopenjp2-7_2.5.0-2ubuntu1_arm64.deb ... 123s Unpacking libopenjp2-7:arm64 (2.5.0-2ubuntu1) ... 123s Selecting previously unselected package libpaper1:arm64. 123s Preparing to unpack .../066-libpaper1_1.1.29build1_arm64.deb ... 123s Unpacking libpaper1:arm64 (1.1.29build1) ... 123s Selecting previously unselected package libdeflate0:arm64. 123s Preparing to unpack .../067-libdeflate0_1.22-1_arm64.deb ... 123s Unpacking libdeflate0:arm64 (1.22-1) ... 123s Selecting previously unselected package libjbig0:arm64. 123s Preparing to unpack .../068-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 123s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 123s Selecting previously unselected package liblerc4:arm64. 123s Preparing to unpack .../069-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 123s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 123s Selecting previously unselected package libsharpyuv0:arm64. 123s Preparing to unpack .../070-libsharpyuv0_1.4.0-0.1_arm64.deb ... 123s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 123s Selecting previously unselected package libwebp7:arm64. 123s Preparing to unpack .../071-libwebp7_1.4.0-0.1_arm64.deb ... 123s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 123s Selecting previously unselected package libtiff6:arm64. 123s Preparing to unpack .../072-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 123s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 123s Selecting previously unselected package libice6:arm64. 123s Preparing to unpack .../073-libice6_2%3a1.1.1-1_arm64.deb ... 123s Unpacking libice6:arm64 (2:1.1.1-1) ... 123s Selecting previously unselected package libsm6:arm64. 123s Preparing to unpack .../074-libsm6_2%3a1.2.4-1_arm64.deb ... 123s Unpacking libsm6:arm64 (2:1.2.4-1) ... 123s Selecting previously unselected package libxt6t64:arm64. 123s Preparing to unpack .../075-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 123s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 123s Selecting previously unselected package libgs10:arm64. 123s Preparing to unpack .../076-libgs10_10.03.1~dfsg1-0ubuntu2_arm64.deb ... 123s Unpacking libgs10:arm64 (10.03.1~dfsg1-0ubuntu2) ... 123s Selecting previously unselected package ghostscript. 123s Preparing to unpack .../077-ghostscript_10.03.1~dfsg1-0ubuntu2_arm64.deb ... 123s Unpacking ghostscript (10.03.1~dfsg1-0ubuntu2) ... 124s Selecting previously unselected package help2man. 124s Preparing to unpack .../078-help2man_1.49.3_arm64.deb ... 124s Unpacking help2man (1.49.3) ... 124s Selecting previously unselected package libblas3:arm64. 124s Preparing to unpack .../079-libblas3_3.12.0-3build2_arm64.deb ... 124s Unpacking libblas3:arm64 (3.12.0-3build2) ... 124s Selecting previously unselected package libexpat1-dev:arm64. 124s Preparing to unpack .../080-libexpat1-dev_2.6.2-2_arm64.deb ... 124s Unpacking libexpat1-dev:arm64 (2.6.2-2) ... 124s Selecting previously unselected package libgfortran5:arm64. 124s Preparing to unpack .../081-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 124s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 124s Selecting previously unselected package libjs-bootstrap. 124s Preparing to unpack .../082-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 124s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 124s Selecting previously unselected package libjs-jquery. 124s Preparing to unpack .../083-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 124s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 124s Selecting previously unselected package libjs-underscore. 124s Preparing to unpack .../084-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 124s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 124s Selecting previously unselected package libjs-sphinxdoc. 124s Preparing to unpack .../085-libjs-sphinxdoc_7.4.7-4_all.deb ... 124s Unpacking libjs-sphinxdoc (7.4.7-4) ... 124s Selecting previously unselected package liblapack3:arm64. 124s Preparing to unpack .../086-liblapack3_3.12.0-3build2_arm64.deb ... 124s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 124s Selecting previously unselected package liblbfgsb0:arm64. 124s Preparing to unpack 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(6.20241024) ... 146s Setting up autopkgtest-satdep (0) ... 146s Processing triggers for systemd (256.5-2ubuntu4) ... 146s Processing triggers for man-db (2.12.1-3) ... 148s Processing triggers for install-info (7.1.1-1) ... 148s Processing triggers for libc-bin (2.40-1ubuntu3) ... 153s (Reading database ... 87865 files and directories currently installed.) 153s Removing autopkgtest-satdep (0) ... 154s autopkgtest [11:04:13]: test pybuild-autopkgtest: pybuild-autopkgtest 154s autopkgtest [11:04:13]: test pybuild-autopkgtest: [----------------------- 154s pybuild-autopkgtest 154s I: pybuild base:311: cd /tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build; python3.13 -m pytest -k 'not test_transformseq and not test_cli and not test_resources' 156s ============================= test session starts ============================== 156s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 156s rootdir: /tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build 156s plugins: typeguard-4.4.1 156s collected 0 items / 23 errors 156s 156s ==================================== ERRORS ==================================== 156s ___________________ ERROR collecting tests/test_array_io.py ____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_array_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ______________________ ERROR collecting tests/test_cli.py ______________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_cli.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s __________________ ERROR collecting tests/test_clustal_io.py ___________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_clustal_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s _____________________ ERROR collecting tests/test_data.py ______________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_data.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ___________________ ERROR collecting tests/test_fasta_io.py ____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_fasta_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s __________________ ERROR collecting tests/test_genbank_io.py ___________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_genbank_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ______________ ERROR collecting tests/test_intelligenetics_io.py _______________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_intelligenetics_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ____________________ ERROR collecting tests/test_matrix.py _____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_matrix.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ____________________ ERROR collecting tests/test_msf_io.py _____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_msf_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ____________________ ERROR collecting tests/test_nbrf_io.py ____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_nbrf_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s _____________________ ERROR collecting tests/test_nexus.py _____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_nexus.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ___________________ ERROR collecting tests/test_nexus_io.py ____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_nexus_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ____________________ ERROR collecting tests/test_null_io.py ____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_null_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpyE: pybuild pybuild:389: test: plugin distutils failed with: exit code=2: cd /tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build; python3.13 -m pytest -k 'not test_transformseq and not test_cli and not test_resources' 156s I: pybuild base:311: cd /tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build; python3.12 -m pytest -k 'not test_transformseq and not test_cli and not test_resources' 156s .core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ___________________ ERROR collecting tests/test_phylip_io.py ___________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_phylip_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ___________________ ERROR collecting tests/test_plain_io.py ____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_plain_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ______________________ ERROR collecting tests/test_seq.py ______________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_seq.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ____________________ ERROR collecting tests/test_seq_io.py _____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_seq_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s _________________ ERROR collecting tests/test_stockholm_io.py __________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_stockholm_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ___________________ ERROR collecting tests/test_table_io.py ____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_table_io.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ___________________ ERROR collecting tests/test_transform.py ___________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_transform.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s _________________ ERROR collecting tests/test_transformseq.py __________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_transformseq.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s _____________________ ERROR collecting tests/test_utils.py _____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_utils.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s ____________________ ERROR collecting tests/test_weblogo.py ____________________ 156s ImportError while importing test module '/tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build/tests/test_weblogo.py'. 156s Hint: make sure your test modules/packages have valid Python names. 156s Traceback: 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 156s from . import multiarray 156s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 156s from . import overrides 156s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 156s from numpy.core._multiarray_umath import ( 156s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 156s 156s During handling of the above exception, another exception occurred: 156s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 156s from numpy.__config__ import show as show_config 156s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 156s from numpy.core._multiarray_umath import ( 156s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 156s raise ImportError(msg) 156s E ImportError: 156s E 156s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 156s E 156s E Importing the numpy C-extensions failed. This error can happen for 156s E many reasons, often due to issues with your setup or how NumPy was 156s E installed. 156s E 156s E We have compiled some common reasons and troubleshooting tips at: 156s E 156s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 156s E 156s E Please note and check the following: 156s E 156s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 156s E * The NumPy version is: "1.26.4" 156s E 156s E and make sure that they are the versions you expect. 156s E Please carefully study the documentation linked above for further help. 156s E 156s E Original error was: No module named 'numpy.core._multiarray_umath' 156s 156s The above exception was the direct cause of the following exception: 156s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 156s return _bootstrap._gcd_import(name[level:], package, level) 156s tests/__init__.py:5: in 156s from weblogo.utils import resource_filename, resource_stream, resource_string 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 156s from .logo import * # noqa: F401, F403 156s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 156s import numpy as np 156s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 156s raise ImportError(msg) from e 156s E ImportError: Error importing numpy: you should not try to import numpy from 156s E its source directory; please exit the numpy source tree, and relaunch 156s E your python interpreter from there. 156s =============================== warnings summary =============================== 156s ../../../../usr/lib/python3/dist-packages/weblogo/__init__.py:1 156s /usr/lib/python3/dist-packages/weblogo/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 156s from pkg_resources import DistributionNotFound, get_distribution 156s 156s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 156s =========================== short test summary info ============================ 156s ERROR tests/test_array_io.py 156s ERROR tests/test_cli.py 156s ERROR tests/test_clustal_io.py 156s ERROR tests/test_data.py 156s ERROR tests/test_fasta_io.py 156s ERROR tests/test_genbank_io.py 156s ERROR tests/test_intelligenetics_io.py 156s ERROR tests/test_matrix.py 156s ERROR tests/test_msf_io.py 156s ERROR tests/test_nbrf_io.py 156s ERROR tests/test_nexus.py 156s ERROR tests/test_nexus_io.py 156s ERROR tests/test_null_io.py 156s ERROR tests/test_phylip_io.py 156s ERROR tests/test_plain_io.py 156s ERROR tests/test_seq.py 156s ERROR tests/test_seq_io.py 156s ERROR tests/test_stockholm_io.py 156s ERROR tests/test_table_io.py 156s ERROR tests/test_transform.py 156s ERROR tests/test_transformseq.py 156s ERROR tests/test_utils.py 156s ERROR tests/test_weblogo.py 156s !!!!!!!!!!!!!!!!!!! Interrupted: 23 errors during collection !!!!!!!!!!!!!!!!!!! 156s ======================== 1 warning, 23 errors in 1.41s ========================= 158s ============================= test session starts ============================== 158s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 158s rootdir: /tmp/autopkgtest.Fv1CGh/autopkgtest_tmp/build 158s plugins: typeguard-4.4.1 158s collected 245 items / 21 deselected / 224 selected 158s 158s tests/test_array_io.py .... [ 1%] 158s tests/test_clustal_io.py ............. [ 7%] 158s tests/test_data.py . [ 8%] 158s tests/test_fasta_io.py ............. [ 13%] 158s tests/test_genbank_io.py .. [ 14%] 158s tests/test_intelligenetics_io.py ..... [ 16%] 158s tests/test_matrix.py ....... [ 20%] 158s tests/test_msf_io.py ........ [ 23%] 158s tests/test_nbrf_io.py ......... [ 27%] 158s tests/test_nexus.py ..... [ 29%] 158s tests/test_nexus_io.py ....... [ 33%] 158s tests/test_null_io.py ... [ 34%] 158s tests/test_phylip_io.py ........... [ 39%] 158s tests/test_plain_io.py ... [ 40%] 158s tests/test_seq.py .............................................. [ 61%] 158s tests/test_seq_io.py ............ [ 66%] 158s tests/test_stockholm_io.py ......... [ 70%] 158s tests/test_table_io.py ... [ 71%] 158s tests/test_transform.py ........ [ 75%] 158s tests/test_utils.py ........... [ 80%] 162s tests/test_weblogo.py ............................................ [100%] 162s 162s =============================== warnings summary =============================== 162s ../../../../usr/lib/python3/dist-packages/weblogo/__init__.py:1 162s /usr/lib/python3/dist-packages/weblogo/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 162s from pkg_resources import DistributionNotFound, get_distribution 162s 162s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 162s ================ 224 passed, 21 deselected, 1 warning in 5.36s ================= 162s pybuild-autopkgtest: error: pybuild --autopkgtest --test-pytest -i python{version} -p "3.13 3.12" returned exit code 13 162s make: *** [/tmp/BdPGutr_du/run:4: pybuild-autopkgtest] Error 25 162s pybuild-autopkgtest: error: /tmp/BdPGutr_du/run pybuild-autopkgtest returned exit code 2 162s autopkgtest [11:04:21]: test pybuild-autopkgtest: -----------------------] 163s autopkgtest [11:04:22]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 163s pybuild-autopkgtest FAIL non-zero exit status 25 163s autopkgtest [11:04:22]: @@@@@@@@@@@@@@@@@@@@ summary 163s pybuild-autopkgtest FAIL non-zero exit status 25 178s nova [W] Skipping flock in bos03-arm64 178s Creating nova instance adt-plucky-arm64-python-weblogo-20241113-110139-juju-7f2275-prod-proposed-migration-environment-20-738b53a2-9fc1-43a6-ac72-a129ea049951 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...