0s autopkgtest [10:46:35]: starting date and time: 2024-11-13 10:46:35+0000 0s autopkgtest [10:46:35]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [10:46:35]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.sgy1o4as/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-pot --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-12.secgroup --name adt-plucky-arm64-python-pot-20241113-104635-juju-7f2275-prod-proposed-migration-environment-20-4bbe22d5-38b3-4491-8e25-9c7abe09a876 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 95s autopkgtest [10:48:10]: testbed dpkg architecture: arm64 95s autopkgtest [10:48:10]: testbed apt version: 2.9.8 95s autopkgtest [10:48:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup 97s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 97s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 97s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 97s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 97s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 97s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 97s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 97s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 98s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 98s Fetched 1794 kB in 1s (1814 kB/s) 98s Reading package lists... 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 103s Calculating upgrade... 104s The following NEW packages will be installed: 104s python3.13-gdbm 104s The following packages will be upgraded: 104s libpython3-stdlib python3 python3-gdbm python3-minimal 104s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 104s Need to get 101 kB of archives. 104s After this operation, 141 kB of additional disk space will be used. 104s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 104s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 104s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 104s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 104s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 105s Fetched 101 kB in 0s (293 kB/s) 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 105s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 105s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 105s Setting up python3-minimal (3.12.7-1) ... 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 105s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 105s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 105s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 105s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 105s Selecting previously unselected package python3.13-gdbm. 106s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 106s Unpacking python3.13-gdbm (3.13.0-2) ... 106s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 106s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 106s Setting up python3.13-gdbm (3.13.0-2) ... 106s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 106s Setting up python3 (3.12.7-1) ... 106s Setting up python3-gdbm:arm64 (3.12.7-1) ... 106s Processing triggers for man-db (2.12.1-3) ... 107s Reading package lists... 108s Building dependency tree... 108s Reading state information... 109s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 110s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 110s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 110s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 110s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 112s Reading package lists... 112s Reading package lists... 112s Building dependency tree... 112s Reading state information... 113s Calculating upgrade... 115s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 115s Reading package lists... 115s Building dependency tree... 115s Reading state information... 117s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 122s autopkgtest [10:48:37]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 123s autopkgtest [10:48:38]: @@@@@@@@@@@@@@@@@@@@ apt-source python-pot 128s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-pot 0.9.4+dfsg-1 (dsc) [2114 B] 128s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-pot 0.9.4+dfsg-1 (tar) [775 kB] 128s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-pot 0.9.4+dfsg-1 (diff) [5972 B] 128s gpgv: Signature made Fri Jul 26 13:27:39 2024 UTC 128s gpgv: using RSA key CFC5EF8510851E7355B55E809D11582AFD548CFA 128s gpgv: issuer "gspr@nonempty.org" 128s gpgv: Can't check signature: No public key 128s dpkg-source: warning: cannot verify inline signature for ./python-pot_0.9.4+dfsg-1.dsc: no acceptable signature found 128s autopkgtest [10:48:43]: testing package python-pot version 0.9.4+dfsg-1 130s autopkgtest [10:48:45]: build not needed 132s autopkgtest [10:48:47]: test upstream.sh: preparing testbed 137s Reading package lists... 138s Building dependency tree... 138s Reading state information... 138s Starting pkgProblemResolver with broken count: 0 138s Starting 2 pkgProblemResolver with broken count: 0 138s Done 139s The following additional packages will be installed: 139s libblas3 libgfortran5 libgomp1 liblapack3 liblbfgsb0 libpython3.13-minimal 139s libpython3.13-stdlib python3-all python3-decorator python3-iniconfig 139s python3-joblib python3-numpy python3-packaging python3-pluggy python3-pot 139s python3-pytest python3-scipy python3-sklearn python3-sklearn-lib 139s python3-threadpoolctl python3.13 python3.13-minimal 139s Suggested packages: 139s python-joblib-doc gcc gfortran python-numpy-doc python3-dev python-scipy-doc 139s python3-dap python-sklearn-doc ipython3 python3.13-venv python3.13-doc 139s binfmt-support 139s Recommended packages: 139s python3-simplejson python3-psutil g++ | c++-compiler python3-pil 139s python3-matplotlib 139s The following NEW packages will be installed: 139s autopkgtest-satdep libblas3 libgfortran5 libgomp1 liblapack3 liblbfgsb0 139s libpython3.13-minimal libpython3.13-stdlib python3-all python3-decorator 139s python3-iniconfig python3-joblib python3-numpy python3-packaging 139s python3-pluggy python3-pot python3-pytest python3-scipy python3-sklearn 139s python3-sklearn-lib python3-threadpoolctl python3.13 python3.13-minimal 139s 0 upgraded, 23 newly installed, 0 to remove and 0 not upgraded. 139s Need to get 35.6 MB/35.6 MB of archives. 139s After this operation, 157 MB of additional disk space will be used. 139s Get:1 /tmp/autopkgtest.IB3nvA/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [724 B] 139s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 140s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 140s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 140s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 140s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB] 140s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 140s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 140s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 140s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 140s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 140s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 140s Get:13 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 140s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-joblib all 1.3.2-5 [206 kB] 140s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 140s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 140s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 140s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB] 141s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pot arm64 0.9.4+dfsg-1 [219 kB] 141s Get:20 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 141s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-threadpoolctl all 3.1.0-1 [21.3 kB] 141s Get:22 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sklearn-lib arm64 1.4.2+dfsg-6 [3806 kB] 141s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sklearn all 1.4.2+dfsg-6 [2257 kB] 142s Fetched 35.6 MB in 2s (14.7 MB/s) 142s Selecting previously unselected package libpython3.13-minimal:arm64. 142s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 142s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ... 142s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 142s Selecting previously unselected package python3.13-minimal. 142s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_arm64.deb ... 142s Unpacking python3.13-minimal (3.13.0-2) ... 142s Selecting previously unselected package libblas3:arm64. 142s Preparing to unpack .../02-libblas3_3.12.0-3build2_arm64.deb ... 142s Unpacking libblas3:arm64 (3.12.0-3build2) ... 142s Selecting previously unselected package libgfortran5:arm64. 142s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 142s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 142s Selecting previously unselected package libgomp1:arm64. 142s Preparing to unpack .../04-libgomp1_14.2.0-8ubuntu1_arm64.deb ... 142s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ... 142s Selecting previously unselected package liblapack3:arm64. 142s Preparing to unpack .../05-liblapack3_3.12.0-3build2_arm64.deb ... 142s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 142s Selecting previously unselected package liblbfgsb0:arm64. 142s Preparing to unpack .../06-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ... 142s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 142s Selecting previously unselected package libpython3.13-stdlib:arm64. 142s Preparing to unpack .../07-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 142s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 142s Selecting previously unselected package python3.13. 142s Preparing to unpack .../08-python3.13_3.13.0-2_arm64.deb ... 142s Unpacking python3.13 (3.13.0-2) ... 142s Selecting previously unselected package python3-all. 142s Preparing to unpack .../09-python3-all_3.12.7-1_arm64.deb ... 142s Unpacking python3-all (3.12.7-1) ... 142s Selecting previously unselected package python3-decorator. 142s Preparing to unpack .../10-python3-decorator_5.1.1-5_all.deb ... 142s Unpacking python3-decorator (5.1.1-5) ... 142s Selecting previously unselected package python3-iniconfig. 142s Preparing to unpack .../11-python3-iniconfig_1.1.1-2_all.deb ... 142s Unpacking python3-iniconfig (1.1.1-2) ... 143s Selecting previously unselected package python3-joblib. 143s Preparing to unpack .../12-python3-joblib_1.3.2-5_all.deb ... 143s Unpacking python3-joblib (1.3.2-5) ... 143s Selecting previously unselected package python3-numpy. 143s Preparing to unpack .../13-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 143s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 143s Selecting previously unselected package python3-packaging. 143s Preparing to unpack .../14-python3-packaging_24.1-1_all.deb ... 143s Unpacking python3-packaging (24.1-1) ... 143s Selecting previously unselected package python3-pluggy. 143s Preparing to unpack .../15-python3-pluggy_1.5.0-1_all.deb ... 143s Unpacking python3-pluggy (1.5.0-1) ... 143s Selecting previously unselected package python3-scipy. 143s Preparing to unpack .../16-python3-scipy_1.13.1-5_arm64.deb ... 143s Unpacking python3-scipy (1.13.1-5) ... 143s Selecting previously unselected package python3-pot. 143s Preparing to unpack .../17-python3-pot_0.9.4+dfsg-1_arm64.deb ... 143s Unpacking python3-pot (0.9.4+dfsg-1) ... 143s Selecting previously unselected package python3-pytest. 143s Preparing to unpack .../18-python3-pytest_8.3.3-1_all.deb ... 143s Unpacking python3-pytest (8.3.3-1) ... 143s Selecting previously unselected package python3-threadpoolctl. 143s Preparing to unpack .../19-python3-threadpoolctl_3.1.0-1_all.deb ... 143s Unpacking python3-threadpoolctl (3.1.0-1) ... 143s Selecting previously unselected package python3-sklearn-lib:arm64. 143s Preparing to unpack .../20-python3-sklearn-lib_1.4.2+dfsg-6_arm64.deb ... 143s Unpacking python3-sklearn-lib:arm64 (1.4.2+dfsg-6) ... 144s Selecting previously unselected package python3-sklearn. 144s Preparing to unpack .../21-python3-sklearn_1.4.2+dfsg-6_all.deb ... 144s Unpacking python3-sklearn (1.4.2+dfsg-6) ... 144s Selecting previously unselected package autopkgtest-satdep. 144s Preparing to unpack .../22-1-autopkgtest-satdep.deb ... 144s Unpacking autopkgtest-satdep (0) ... 144s Setting up python3-iniconfig (1.1.1-2) ... 144s Setting up python3-joblib (1.3.2-5) ... 145s Setting up python3-threadpoolctl (3.1.0-1) ... 145s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ... 145s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 145s Setting up python3-decorator (5.1.1-5) ... 145s Setting up libblas3:arm64 (3.12.0-3build2) ... 145s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 145s Setting up python3-packaging (24.1-1) ... 145s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 145s Setting up python3-pluggy (1.5.0-1) ... 146s Setting up python3.13-minimal (3.13.0-2) ... 147s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 147s Setting up liblapack3:arm64 (3.12.0-3build2) ... 147s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 147s Setting up python3.13 (3.13.0-2) ... 148s Setting up python3-pytest (8.3.3-1) ... 149s Setting up python3-all (3.12.7-1) ... 149s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 153s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 153s Setting up python3-scipy (1.13.1-5) ... 160s Setting up python3-pot (0.9.4+dfsg-1) ... 161s Setting up python3-sklearn-lib:arm64 (1.4.2+dfsg-6) ... 161s Setting up python3-sklearn (1.4.2+dfsg-6) ... 166s Setting up autopkgtest-satdep (0) ... 166s Processing triggers for systemd (256.5-2ubuntu4) ... 166s Processing triggers for man-db (2.12.1-3) ... 166s Processing triggers for libc-bin (2.40-1ubuntu3) ... 178s (Reading database ... 84278 files and directories currently installed.) 178s Removing autopkgtest-satdep (0) ... 181s autopkgtest [10:49:36]: test upstream.sh: [----------------------- 183s Running tests with Python 3.13. 183s ImportError while loading conftest '/tmp/autopkgtest.IB3nvA/autopkgtest_tmp/test/conftest.py'. 183s test/conftest.py:11: in 183s from ot.backend import get_backend_list, jax, tf 183s /usr/lib/python3/dist-packages/ot/__init__.py:21: in 183s from . import lp 183s /usr/lib/python3/dist-packages/ot/lp/__init__.py:15: in 183s import numpy as np 183s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 183s raise ImportError(msg) from e 183s E ImportError: Error importing numpy: you should not try to import numpy from 183s E its source directory; please exit the numpy source tree, and relaunch 183s E your python interpreter from there. 183s autopkgtest [10:49:38]: test upstream.sh: -----------------------] 184s upstream.sh FAIL non-zero exit status 4 184s autopkgtest [10:49:39]: test upstream.sh: - - - - - - - - - - results - - - - - - - - - - 185s autopkgtest [10:49:40]: @@@@@@@@@@@@@@@@@@@@ summary 185s upstream.sh FAIL non-zero exit status 4 195s nova [W] Skipping flock in bos03-arm64 195s Creating nova instance adt-plucky-arm64-python-pot-20241113-104635-juju-7f2275-prod-proposed-migration-environment-20-4bbe22d5-38b3-4491-8e25-9c7abe09a876 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...