0s autopkgtest [14:37:10]: starting date and time: 2024-12-04 14:37:10+0000 0s autopkgtest [14:37:10]: git checkout: 48af33f0 Fix --add-apt-source=ppa for focal 0s autopkgtest [14:37:10]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.i4y4eqob/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:h5py,src:openmpi --apt-upgrade python-meshio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=h5py/3.11.0-8ubuntu3 openmpi/5.0.6-3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-35.secgroup --name adt-plucky-arm64-python-meshio-20241204-143710-juju-7f2275-prod-proposed-migration-environment-2-3fc5fab0-cdc7-4a20-9e11-8b5d4a22cfd5 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 318s autopkgtest [14:42:28]: testbed dpkg architecture: arm64 318s autopkgtest [14:42:28]: testbed apt version: 2.9.16 319s autopkgtest [14:42:29]: @@@@@@@@@@@@@@@@@@@@ test bed setup 319s autopkgtest [14:42:29]: testbed release detected to be: None 320s autopkgtest [14:42:30]: updating testbed package index (apt update) 320s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 321s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 321s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 321s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 321s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.2 kB] 321s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 321s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [745 kB] 321s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [58.3 kB] 321s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [125 kB] 321s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [58.2 kB] 321s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [617 kB] 321s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [20.8 kB] 321s Fetched 1721 kB in 1s (1731 kB/s) 322s Reading package lists... 323s Reading package lists... 323s Building dependency tree... 323s Reading state information... 324s Calculating upgrade... 324s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 324s Reading package lists... 325s Building dependency tree... 325s Reading state information... 326s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 326s autopkgtest [14:42:36]: upgrading testbed (apt dist-upgrade and autopurge) 326s Reading package lists... 326s Building dependency tree... 326s Reading state information... 327s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 327s Starting 2 pkgProblemResolver with broken count: 0 327s Done 328s Entering ResolveByKeep 328s 328s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 329s Reading package lists... 329s Building dependency tree... 329s Reading state information... 329s Starting pkgProblemResolver with broken count: 0 330s Starting 2 pkgProblemResolver with broken count: 0 330s Done 330s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 333s autopkgtest [14:42:43]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 333s autopkgtest [14:42:43]: @@@@@@@@@@@@@@@@@@@@ apt-source python-meshio 336s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-meshio 7.0.0-really-5.3.5-3 (dsc) [2645 B] 336s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-meshio 7.0.0-really-5.3.5-3 (tar) [491 kB] 336s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-meshio 7.0.0-really-5.3.5-3 (diff) [36.7 kB] 336s gpgv: Signature made Thu Oct 24 08:56:59 2024 UTC 336s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 336s gpgv: Can't check signature: No public key 336s dpkg-source: warning: cannot verify inline signature for ./python-meshio_7.0.0-really-5.3.5-3.dsc: no acceptable signature found 336s dpkg-source: warning: diff 'src/debian/patches/xdmf_time_series_PR1464.patch' patches file src/tests/test_xdmf.py more than once 336s dpkg-source: warning: diff 'src/debian/patches/support_DGF_PR1467.patch' patches file src/src/meshio/__init__.py more than once 336s dpkg-source: warning: diff 'src/debian/patches/support_DGF_PR1467.patch' patches file src/src/meshio/dgf/_dgf.py more than once 336s dpkg-source: warning: diff 'src/debian/patches/support_DGF_PR1467.patch' patches file src/tests/test_dgf.py more than once 336s autopkgtest [14:42:46]: testing package python-meshio version 7.0.0-really-5.3.5-3 337s autopkgtest [14:42:47]: build not needed 337s autopkgtest [14:42:47]: test test-meshio: preparing testbed 337s Reading package lists... 338s Building dependency tree... 338s Reading state information... 338s Starting pkgProblemResolver with broken count: 3 338s Starting 2 pkgProblemResolver with broken count: 3 338s Investigating (0) satisfy:command-line:arm64 < none -> 1 @un puN Ib > 338s Broken satisfy:command-line:arm64 Depends on python3-dolfin-real:arm64 < none @un H > 338s Considering python3-dolfin-real:arm64 2 as a solution to satisfy:command-line:arm64 9998 338s Considering python3-dolfin-real:arm64 2 as a solution to satisfy:command-line:arm64 9998 338s Investigating (0) libopenmpi40:arm64 < none -> 5.0.6-3 @un puN Ib > 338s Broken libopenmpi40:arm64 Breaks on libopenmpi3:arm64 < none @un H > (< 5.0.6-3) 338s Conflicts//Breaks against version 4.1.6-13.3ubuntu2 for libopenmpi3t64 but that is not InstVer, ignoring 338s Considering libopenmpi3t64:arm64 64 as a solution to libopenmpi40:arm64 2 338s Re-Instated libopenmpi3t64:arm64 338s Broken libopenmpi40:arm64 Breaks on libopenmpi3t64:arm64 < none -> 5.0.5-6 @un puN > (< 5.0.6-3) 338s Considering libopenmpi3t64:arm64 2 as a solution to libopenmpi40:arm64 2 338s Conflicts//Breaks against version 4.1.6-13.3ubuntu2 for libopenmpi3t64 but that is not InstVer, ignoring 338s Investigating (0) python3-dolfin:arm64 < none -> 2019.2.0~legacy20240219.1c52e83-10ubuntu1 @un puN Ib > 338s Broken python3-dolfin:arm64 Depends on python3-dolfin-real:arm64 < none @un H > 338s Considering python3-dolfin-real:arm64 2 as a solution to python3-dolfin:arm64 -1 338s Considering python3-dolfin-real:arm64 2 as a solution to python3-dolfin:arm64 -1 338s Broken python3-dolfin:arm64 Depends on python3-dolfin64-real:arm64 < none @un H > 338s Considering python3-dolfin64-real:arm64 1 as a solution to python3-dolfin:arm64 -1 338s Considering python3-dolfin64-real:arm64 1 as a solution to python3-dolfin:arm64 -1 338s Done 338s Some packages could not be installed. This may mean that you have 338s requested an impossible situation or if you are using the unstable 338s distribution that some required packages have not yet been created 338s or been moved out of Incoming. 338s The following information may help to resolve the situation: 338s 338s The following packages have unmet dependencies: 339s libopenmpi40 : Breaks: libopenmpi3 (< 5.0.6-3) 339s Breaks: libopenmpi3t64 (< 5.0.6-3) but 5.0.5-6 is to be installed 339s python3-dolfin : Depends: python3-dolfin-real but it is not installable or 339s python3-dolfin64-real but it is not installable 339s satisfy:command-line : Depends: python3-dolfin-real but it is not installable 339s E: Unable to correct problems, you have held broken packages. 339s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 339s Reading package lists... 339s Building dependency tree... 339s Reading state information... 340s Starting pkgProblemResolver with broken count: 7 340s Starting 2 pkgProblemResolver with broken count: 7 340s Investigating (0) libpetsc-real3.21:arm64 < none -> 3.21.6+dfsg1-2ubuntu2 @un puN Ib > 340s Broken libpetsc-real3.21:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 340s Considering libopenmpi3t64:arm64 0 as a solution to libpetsc-real3.21:arm64 14 340s Investigating (0) python3-petsc4py-real3.21:arm64 < none -> 3.21.6-2ubuntu2 @un puN Ib > 340s Broken python3-petsc4py-real3.21:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 340s Considering libopenmpi3t64:arm64 0 as a solution to python3-petsc4py-real3.21:arm64 8 340s Investigating (0) libhypre-2.31.0:arm64 < none -> 2.31.0-1exp2 @un puN Ib > 340s Broken libhypre-2.31.0:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 4.1.6) 340s Considering libopenmpi3t64:arm64 0 as a solution to libhypre-2.31.0:arm64 6 340s Considering libopenmpi3t64:arm64 0 as a solution to libhypre-2.31.0:arm64 6 340s Investigating (0) python3-slepc4py-real3.21:arm64 < none -> 3.21.2-1ubuntu2 @un puN Ib > 340s Broken python3-slepc4py-real3.21:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 340s Considering libopenmpi3t64:arm64 0 as a solution to python3-slepc4py-real3.21:arm64 4 340s Investigating (0) libslepc-real3.21:arm64 < none -> 3.21.2+dfsg1-3 @un puN Ib > 340s Broken libslepc-real3.21:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 340s Considering libopenmpi3t64:arm64 0 as a solution to libslepc-real3.21:arm64 4 340s Investigating (0) libdolfin2019.2t64:arm64 < none -> 2019.2.0~legacy20240219.1c52e83-11ubuntu1 @un puN Ib > 340s Broken libdolfin2019.2t64:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 340s Considering libopenmpi3t64:arm64 0 as a solution to libdolfin2019.2t64:arm64 2 340s Investigating (0) python3-dolfin-real:arm64 < none -> 2019.2.0~legacy20240219.1c52e83-11ubuntu1 @un puN Ib > 340s Broken python3-dolfin-real:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 340s Considering libopenmpi3t64:arm64 0 as a solution to python3-dolfin-real:arm64 1 340s Done 340s Some packages could not be installed. This may mean that you have 340s requested an impossible situation or if you are using the unstable 340s distribution that some required packages have not yet been created 340s or been moved out of Incoming. 340s The following information may help to resolve the situation: 340s 340s The following packages have unmet dependencies: 340s libdolfin2019.2t64 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 340s libhypre-2.31.0 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 340s libpetsc-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 340s libslepc-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 340s python3-dolfin-real : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 340s python3-petsc4py-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 340s python3-slepc4py-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 340s E: Unable to correct problems, you have held broken packages. 340s test-meshio FAIL badpkg 340s blame: python-meshio 340s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 340s autopkgtest [14:42:50]: test test-msh2xdmf: preparing testbed 341s Reading package lists... 341s Building dependency tree... 341s Reading state information... 341s Starting pkgProblemResolver with broken count: 7 341s Starting 2 pkgProblemResolver with broken count: 7 341s Investigating (0) libpetsc-real3.21:arm64 < none -> 3.21.6+dfsg1-2ubuntu2 @un puN Ib > 341s Broken libpetsc-real3.21:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 341s Considering libopenmpi3t64:arm64 0 as a solution to libpetsc-real3.21:arm64 14 341s Investigating (0) python3-petsc4py-real3.21:arm64 < none -> 3.21.6-2ubuntu2 @un puN Ib > 341s Broken python3-petsc4py-real3.21:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 341s Considering libopenmpi3t64:arm64 0 as a solution to python3-petsc4py-real3.21:arm64 8 341s Investigating (0) libhypre-2.31.0:arm64 < none -> 2.31.0-1exp2 @un puN Ib > 341s Broken libhypre-2.31.0:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 4.1.6) 341s Considering libopenmpi3t64:arm64 0 as a solution to libhypre-2.31.0:arm64 6 341s Considering libopenmpi3t64:arm64 0 as a solution to libhypre-2.31.0:arm64 6 341s Investigating (0) python3-slepc4py-real3.21:arm64 < none -> 3.21.2-1ubuntu2 @un puN Ib > 341s Broken python3-slepc4py-real3.21:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 341s Considering libopenmpi3t64:arm64 0 as a solution to python3-slepc4py-real3.21:arm64 4 341s Investigating (0) libslepc-real3.21:arm64 < none -> 3.21.2+dfsg1-3 @un puN Ib > 341s Broken libslepc-real3.21:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 341s Considering libopenmpi3t64:arm64 0 as a solution to libslepc-real3.21:arm64 4 341s Investigating (0) libdolfin2019.2t64:arm64 < none -> 2019.2.0~legacy20240219.1c52e83-11ubuntu1 @un puN Ib > 341s Broken libdolfin2019.2t64:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 341s Considering libopenmpi3t64:arm64 0 as a solution to libdolfin2019.2t64:arm64 2 341s Investigating (0) python3-dolfin-real:arm64 < none -> 2019.2.0~legacy20240219.1c52e83-11ubuntu1 @un puN Ib > 341s Broken python3-dolfin-real:arm64 Depends on libopenmpi3t64:arm64 < none @un pH > (>= 5.0.5) 341s Considering libopenmpi3t64:arm64 0 as a solution to python3-dolfin-real:arm64 1 341s Done 341s Some packages could not be installed. This may mean that you have 341s requested an impossible situation or if you are using the unstable 341s distribution that some required packages have not yet been created 341s or been moved out of Incoming. 341s The following information may help to resolve the situation: 341s 341s The following packages have unmet dependencies: 342s libdolfin2019.2t64 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 342s libhypre-2.31.0 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 342s libpetsc-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 342s libslepc-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 342s python3-dolfin-real : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 342s python3-petsc4py-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 342s python3-slepc4py-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 342s E: Unable to correct problems, you have held broken packages. 342s autopkgtest [14:42:52]: @@@@@@@@@@@@@@@@@@@@ summary 342s test-meshio FAIL badpkg 342s blame: python-meshio 342s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 342s test-msh2xdmf FAIL badpkg 342s blame: python-meshio 342s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 342s test-msh2xdmf FAIL badpkg 342s blame: python-meshio 342s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 363s nova [W] Using flock in prodstack6-arm64 363s flock: timeout while waiting to get lock 363s Creating nova instance adt-plucky-arm64-python-meshio-20241204-143710-juju-7f2275-prod-proposed-migration-environment-2-3fc5fab0-cdc7-4a20-9e11-8b5d4a22cfd5 from image adt/ubuntu-plucky-arm64-server-20241204.img (UUID b1e2b1c6-409a-4f80-af2b-468b6b2bbda4)...