0s autopkgtest [14:50:44]: starting date and time: 2025-03-15 14:50:44+0000
  0s autopkgtest [14:50:44]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [14:50:44]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.75b7ntly/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade python-iow --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-36.secgroup --name adt-plucky-arm64-python-iow-20250315-145044-juju-7f2275-prod-proposed-migration-environment-20-f9d4e999-42fc-4433-b201-989e17063135 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
164s autopkgtest [14:53:28]: testbed dpkg architecture: arm64
165s autopkgtest [14:53:29]: testbed apt version: 2.9.33
165s autopkgtest [14:53:29]: @@@@@@@@@@@@@@@@@@@@ test bed setup
165s autopkgtest [14:53:29]: testbed release detected to be: None
166s autopkgtest [14:53:30]: updating testbed package index (apt update)
166s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
167s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
167s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
167s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
167s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
167s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB]
168s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB]
168s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [78.2 kB]
168s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1976 B]
168s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B]
168s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [346 kB]
168s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [15.8 kB]
168s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [4948 B]
168s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [572 B]
169s Fetched 1094 kB in 2s (536 kB/s)
170s Reading package lists...
171s Reading package lists...
171s Building dependency tree...
171s Reading state information...
172s Calculating upgrade...
172s Calculating upgrade...
173s The following packages will be upgraded:
173s   python3-jinja2 strace
173s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
173s Need to get 608 kB of archives.
173s After this operation, 11.3 kB of additional disk space will be used.
173s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB]
174s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
175s Fetched 608 kB in 1s (645 kB/s)
175s (Reading database ... 
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(Reading database ... 117701 files and directories currently installed.)
175s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ...
175s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
175s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
175s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
175s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
176s Setting up strace (6.13+ds-1ubuntu1) ...
176s Processing triggers for man-db (2.13.0-1) ...
176s Reading package lists...
177s Building dependency tree...
177s Reading state information...
177s Solving dependencies...
178s The following packages will be REMOVED:
178s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
178s   libunwind8* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
178s   linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic*
178s   linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic*
178s 0 upgraded, 0 newly installed, 11 to remove and 5 not upgraded.
178s After this operation, 267 MB disk space will be freed.
178s (Reading database ... 
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(Reading database ... 117701 files and directories currently installed.)
178s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
178s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
178s Removing libpython3.12t64:arm64 (3.12.9-1) ...
178s Removing libpython3.12-stdlib:arm64 (3.12.9-1) ...
178s Removing libnsl2:arm64 (1.3.0-3build3) ...
178s Removing libpython3.12-minimal:arm64 (3.12.9-1) ...
178s Removing libunwind8:arm64 (1.6.2-3.1) ...
178s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
179s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
181s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ...
181s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic
181s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic
181s /etc/kernel/postrm.d/initramfs-tools:
181s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic
181s /etc/kernel/postrm.d/zz-flash-kernel:
181s flash-kernel: Kernel 6.11.0-8-generic has been removed.
181s flash-kernel: A higher version (6.14.0-10-generic) is still installed, no reflashing required.
181s /etc/kernel/postrm.d/zz-update-grub:
181s Sourcing file `/etc/default/grub'
181s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
181s Generating grub configuration file ...
182s Found linux image: /boot/vmlinuz-6.14.0-10-generic
182s Found initrd image: /boot/initrd.img-6.14.0-10-generic
182s Warning: os-prober will not be executed to detect other bootable partitions.
182s Systems on them will not be added to the GRUB boot configuration.
182s Check GRUB_DISABLE_OS_PROBER documentation entry.
182s Adding boot menu entry for UEFI Firmware Settings ...
182s done
182s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
182s Processing triggers for libc-bin (2.41-1ubuntu1) ...
183s (Reading database ... 
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(Reading database ... 81650 files and directories currently installed.)
183s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ...
183s Purging configuration files for libpython3.12-minimal:arm64 (3.12.9-1) ...
183s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
183s autopkgtest [14:53:47]: upgrading testbed (apt dist-upgrade and autopurge)
183s Reading package lists...
184s Building dependency tree...
184s Reading state information...
185s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
185s Starting 2 pkgProblemResolver with broken count: 0
185s Done
186s Entering ResolveByKeep
187s 
187s Calculating upgrade...
187s The following packages will be upgraded:
187s   libc-bin libc-dev-bin libc6 libc6-dev locales
188s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
188s Need to get 9530 kB of archives.
188s After this operation, 0 B of additional disk space will be used.
188s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6-dev arm64 2.41-1ubuntu2 [1750 kB]
190s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-dev-bin arm64 2.41-1ubuntu2 [24.0 kB]
190s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc6 arm64 2.41-1ubuntu2 [2910 kB]
193s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libc-bin arm64 2.41-1ubuntu2 [600 kB]
194s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 locales all 2.41-1ubuntu2 [4246 kB]
199s Preconfiguring packages ...
199s Fetched 9530 kB in 11s (860 kB/s)
199s (Reading database ... 
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(Reading database ... 75%
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(Reading database ... 81647 files and directories currently installed.)
199s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_arm64.deb ...
199s Unpacking libc6-dev:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
199s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_arm64.deb ...
199s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
200s Preparing to unpack .../libc6_2.41-1ubuntu2_arm64.deb ...
200s Unpacking libc6:arm64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
200s Setting up libc6:arm64 (2.41-1ubuntu2) ...
200s (Reading database ... 
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(Reading database ... 81647 files and directories currently installed.)
200s Preparing to unpack .../libc-bin_2.41-1ubuntu2_arm64.deb ...
200s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
200s Setting up libc-bin (2.41-1ubuntu2) ...
200s (Reading database ... 
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(Reading database ... 95%
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(Reading database ... 81647 files and directories currently installed.)
200s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
200s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
201s Setting up locales (2.41-1ubuntu2) ...
202s Generating locales (this might take a while)...
204s   en_US.UTF-8... done
204s Generation complete.
204s Setting up libc-dev-bin (2.41-1ubuntu2) ...
204s Setting up libc6-dev:arm64 (2.41-1ubuntu2) ...
204s Processing triggers for man-db (2.13.0-1) ...
205s Processing triggers for systemd (257.3-1ubuntu3) ...
207s Reading package lists...
207s Building dependency tree...
207s Reading state information...
207s Starting pkgProblemResolver with broken count: 0
207s Starting 2 pkgProblemResolver with broken count: 0
207s Done
208s Solving dependencies...
208s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
209s autopkgtest [14:54:13]: rebooting testbed after setup commands that affected boot
231s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
239s autopkgtest [14:54:43]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025
242s autopkgtest [14:54:46]: @@@@@@@@@@@@@@@@@@@@ apt-source python-iow
244s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-iow 1.0.7-1build3 (dsc) [2232 B]
244s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-iow 1.0.7-1build3 (tar) [160 kB]
244s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-iow 1.0.7-1build3 (diff) [4844 B]
245s gpgv: Signature made Tue Mar  4 14:38:40 2025 UTC
245s gpgv:                using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2
245s gpgv: Can't check signature: No public key
245s dpkg-source: warning: cannot verify inline signature for ./python-iow_1.0.7-1build3.dsc: no acceptable signature found
245s autopkgtest [14:54:49]: testing package python-iow version 1.0.7-1build3
245s autopkgtest [14:54:49]: build not needed
246s autopkgtest [14:54:50]: test run-unit-test: preparing testbed
246s Reading package lists...
246s Building dependency tree...
246s Reading state information...
246s Starting pkgProblemResolver with broken count: 0
247s Starting 2 pkgProblemResolver with broken count: 0
247s Done
247s The following NEW packages will be installed:
247s   libaec0 libblas3 libgfortran5 libgomp1 libhdf5-310 libhdf5-hl-310 liblapack3
247s   liblbfgsb0 liblzf1 libssw0 libsz2 python3-all python3-biom-format
247s   python3-click python3-dateutil python3-decorator python3-h5py
247s   python3-h5py-serial python3-hdmedians python3-iow python3-natsort
247s   python3-numpy python3-numpy-dev python3-packaging python3-pandas
247s   python3-pandas-lib python3-patsy python3-pytz python3-scipy python3-skbio
247s   python3-statsmodels python3-statsmodels-lib python3-tz
248s 0 upgraded, 33 newly installed, 0 to remove and 0 not upgraded.
248s Need to get 43.5 MB of archives.
248s After this operation, 201 MB of additional disk space will be used.
248s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy-dev arm64 1:2.2.3+ds-5 [146 kB]
248s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB]
248s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB]
249s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB]
252s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:2.2.3+ds-5 [3981 kB]
259s Get:6 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB]
259s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB]
259s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B]
259s Get:9 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-310 arm64 1.14.5+repack-3 [1331 kB]
262s Get:10 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [59.8 kB]
262s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB]
262s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B]
262s Get:13 http://ftpmaster.internal/ubuntu plucky/universe arm64 libssw0 arm64 1.1-15 [21.8 kB]
262s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all arm64 3.13.2-2 [886 B]
262s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py-serial arm64 3.13.0-1 [1126 kB]
264s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py all 3.13.0-1 [7978 B]
264s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-click all 8.2.0+0.really.8.1.8-1 [80.0 kB]
264s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dateutil all 2.9.0-3 [80.2 kB]
264s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-pytz all 2025.1-3 [162 kB]
264s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tz all 2025.1-3 [1866 B]
264s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pandas-lib arm64 2.2.3+dfsg-8build1 [4586 kB]
272s Get:22 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pandas all 2.2.3+dfsg-8build1 [3112 kB]
278s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB]
278s Get:24 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.14.1-4ubuntu2 [16.7 MB]
304s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-biom-format arm64 2.1.16-1build3 [142 kB]
304s Get:26 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-hdmedians arm64 0.14.2-6build1 [129 kB]
304s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-natsort all 8.0.2-2 [33.8 kB]
304s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.2-1 [51.5 kB]
304s Get:29 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-patsy all 1.0.1-1 [180 kB]
305s Get:30 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-statsmodels-lib arm64 0.14.4+dfsg-1build3 [1686 kB]
307s Get:31 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-statsmodels all 0.14.4+dfsg-1build3 [5011 kB]
313s Get:32 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-skbio arm64 0.6.2-4build2 [1406 kB]
315s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iow arm64 1.0.7-1build3 [413 kB]
316s Fetched 43.5 MB in 1min 8s (639 kB/s)
316s Selecting previously unselected package python3-numpy-dev:arm64.
316s (Reading database ... 
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81647 files and directories currently installed.)
316s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.3+ds-5_arm64.deb ...
316s Unpacking python3-numpy-dev:arm64 (1:2.2.3+ds-5) ...
316s Selecting previously unselected package libblas3:arm64.
316s Preparing to unpack .../01-libblas3_3.12.1-2_arm64.deb ...
316s Unpacking libblas3:arm64 (3.12.1-2) ...
316s Selecting previously unselected package libgfortran5:arm64.
316s Preparing to unpack .../02-libgfortran5_15-20250222-0ubuntu1_arm64.deb ...
316s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ...
316s Selecting previously unselected package liblapack3:arm64.
317s Preparing to unpack .../03-liblapack3_3.12.1-2_arm64.deb ...
317s Unpacking liblapack3:arm64 (3.12.1-2) ...
317s Selecting previously unselected package python3-numpy.
317s Preparing to unpack .../04-python3-numpy_1%3a2.2.3+ds-5_arm64.deb ...
317s Unpacking python3-numpy (1:2.2.3+ds-5) ...
317s Selecting previously unselected package libaec0:arm64.
317s Preparing to unpack .../05-libaec0_1.1.3-1_arm64.deb ...
317s Unpacking libaec0:arm64 (1.1.3-1) ...
317s Selecting previously unselected package libgomp1:arm64.
317s Preparing to unpack .../06-libgomp1_15-20250222-0ubuntu1_arm64.deb ...
317s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ...
317s Selecting previously unselected package libsz2:arm64.
317s Preparing to unpack .../07-libsz2_1.1.3-1_arm64.deb ...
317s Unpacking libsz2:arm64 (1.1.3-1) ...
317s Selecting previously unselected package libhdf5-310:arm64.
317s Preparing to unpack .../08-libhdf5-310_1.14.5+repack-3_arm64.deb ...
317s Unpacking libhdf5-310:arm64 (1.14.5+repack-3) ...
317s Selecting previously unselected package libhdf5-hl-310:arm64.
317s Preparing to unpack .../09-libhdf5-hl-310_1.14.5+repack-3_arm64.deb ...
317s Unpacking libhdf5-hl-310:arm64 (1.14.5+repack-3) ...
317s Selecting previously unselected package liblbfgsb0:arm64.
317s Preparing to unpack .../10-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ...
317s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ...
317s Selecting previously unselected package liblzf1:arm64.
317s Preparing to unpack .../11-liblzf1_3.6-4_arm64.deb ...
317s Unpacking liblzf1:arm64 (3.6-4) ...
317s Selecting previously unselected package libssw0:arm64.
317s Preparing to unpack .../12-libssw0_1.1-15_arm64.deb ...
317s Unpacking libssw0:arm64 (1.1-15) ...
317s Selecting previously unselected package python3-all.
317s Preparing to unpack .../13-python3-all_3.13.2-2_arm64.deb ...
317s Unpacking python3-all (3.13.2-2) ...
317s Selecting previously unselected package python3-h5py-serial.
317s Preparing to unpack .../14-python3-h5py-serial_3.13.0-1_arm64.deb ...
317s Unpacking python3-h5py-serial (3.13.0-1) ...
318s Selecting previously unselected package python3-h5py.
318s Preparing to unpack .../15-python3-h5py_3.13.0-1_all.deb ...
318s Unpacking python3-h5py (3.13.0-1) ...
318s Selecting previously unselected package python3-click.
318s Preparing to unpack .../16-python3-click_8.2.0+0.really.8.1.8-1_all.deb ...
318s Unpacking python3-click (8.2.0+0.really.8.1.8-1) ...
318s Selecting previously unselected package python3-dateutil.
318s Preparing to unpack .../17-python3-dateutil_2.9.0-3_all.deb ...
318s Unpacking python3-dateutil (2.9.0-3) ...
318s Selecting previously unselected package python3-pytz.
318s Preparing to unpack .../18-python3-pytz_2025.1-3_all.deb ...
318s Unpacking python3-pytz (2025.1-3) ...
318s Selecting previously unselected package python3-tz.
318s Preparing to unpack .../19-python3-tz_2025.1-3_all.deb ...
318s Unpacking python3-tz (2025.1-3) ...
318s Selecting previously unselected package python3-pandas-lib:arm64.
318s Preparing to unpack .../20-python3-pandas-lib_2.2.3+dfsg-8build1_arm64.deb ...
318s Unpacking python3-pandas-lib:arm64 (2.2.3+dfsg-8build1) ...
318s Selecting previously unselected package python3-pandas.
318s Preparing to unpack .../21-python3-pandas_2.2.3+dfsg-8build1_all.deb ...
318s Unpacking python3-pandas (2.2.3+dfsg-8build1) ...
318s Selecting previously unselected package python3-decorator.
318s Preparing to unpack .../22-python3-decorator_5.1.1-5_all.deb ...
318s Unpacking python3-decorator (5.1.1-5) ...
318s Selecting previously unselected package python3-scipy.
318s Preparing to unpack .../23-python3-scipy_1.14.1-4ubuntu2_arm64.deb ...
318s Unpacking python3-scipy (1.14.1-4ubuntu2) ...
319s Selecting previously unselected package python3-biom-format.
319s Preparing to unpack .../24-python3-biom-format_2.1.16-1build3_arm64.deb ...
319s Unpacking python3-biom-format (2.1.16-1build3) ...
319s Selecting previously unselected package python3-hdmedians.
319s Preparing to unpack .../25-python3-hdmedians_0.14.2-6build1_arm64.deb ...
319s Unpacking python3-hdmedians (0.14.2-6build1) ...
319s Selecting previously unselected package python3-natsort.
319s Preparing to unpack .../26-python3-natsort_8.0.2-2_all.deb ...
319s Unpacking python3-natsort (8.0.2-2) ...
319s Selecting previously unselected package python3-packaging.
319s Preparing to unpack .../27-python3-packaging_24.2-1_all.deb ...
319s Unpacking python3-packaging (24.2-1) ...
319s Selecting previously unselected package python3-patsy.
319s Preparing to unpack .../28-python3-patsy_1.0.1-1_all.deb ...
319s Unpacking python3-patsy (1.0.1-1) ...
319s Selecting previously unselected package python3-statsmodels-lib:arm64.
319s Preparing to unpack .../29-python3-statsmodels-lib_0.14.4+dfsg-1build3_arm64.deb ...
319s Unpacking python3-statsmodels-lib:arm64 (0.14.4+dfsg-1build3) ...
319s Selecting previously unselected package python3-statsmodels.
319s Preparing to unpack .../30-python3-statsmodels_0.14.4+dfsg-1build3_all.deb ...
319s Unpacking python3-statsmodels (0.14.4+dfsg-1build3) ...
320s Selecting previously unselected package python3-skbio.
320s Preparing to unpack .../31-python3-skbio_0.6.2-4build2_arm64.deb ...
320s Unpacking python3-skbio (0.6.2-4build2) ...
320s Selecting previously unselected package python3-iow.
320s Preparing to unpack .../32-python3-iow_1.0.7-1build3_arm64.deb ...
320s Unpacking python3-iow (1.0.7-1build3) ...
320s Setting up python3-all (3.13.2-2) ...
320s Setting up python3-pytz (2025.1-3) ...
320s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ...
320s Setting up python3-click (8.2.0+0.really.8.1.8-1) ...
320s Setting up libaec0:arm64 (1.1.3-1) ...
320s Setting up python3-tz (2025.1-3) ...
320s Setting up python3-natsort (8.0.2-2) ...
321s Setting up python3-decorator (5.1.1-5) ...
321s Setting up libblas3:arm64 (3.12.1-2) ...
321s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
321s Setting up python3-packaging (24.2-1) ...
321s Setting up liblzf1:arm64 (3.6-4) ...
321s Setting up python3-numpy-dev:arm64 (1:2.2.3+ds-5) ...
321s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ...
321s Setting up python3-dateutil (2.9.0-3) ...
321s Setting up libssw0:arm64 (1.1-15) ...
321s Setting up libsz2:arm64 (1.1.3-1) ...
321s Setting up liblapack3:arm64 (3.12.1-2) ...
321s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
321s Setting up python3-numpy (1:2.2.3+ds-5) ...
323s Setting up libhdf5-310:arm64 (1.14.5+repack-3) ...
323s Setting up python3-hdmedians (0.14.2-6build1) ...
324s Setting up python3-statsmodels-lib:arm64 (0.14.4+dfsg-1build3) ...
324s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ...
324s Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ...
324s Setting up python3-scipy (1.14.1-4ubuntu2) ...
328s Setting up python3-pandas-lib:arm64 (2.2.3+dfsg-8build1) ...
328s Setting up python3-h5py-serial (3.13.0-1) ...
328s Setting up python3-patsy (1.0.1-1) ...
328s Setting up python3-pandas (2.2.3+dfsg-8build1) ...
334s Setting up python3-h5py (3.13.0-1) ...
334s Setting up python3-statsmodels (0.14.4+dfsg-1build3) ...
337s Setting up python3-biom-format (2.1.16-1build3) ...
337s Setting up python3-skbio (0.6.2-4build2) ...
338s Setting up python3-iow (1.0.7-1build3) ...
338s Processing triggers for man-db (2.13.0-1) ...
338s Processing triggers for libc-bin (2.41-1ubuntu2) ...
340s autopkgtest [14:56:24]: test run-unit-test: [-----------------------
342s .........................................../usr/lib/python3/dist-packages/skbio/tree/_tree.py:3287: RepresentationWarning: `TreeNode.tip_tip_distances`: Node with name 'e' does not have an associated length, so a length of 0.0 will be used.
342s   warn(
342s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:3287: RepresentationWarning: `TreeNode.tip_tip_distances`: Node with name 'f' does not have an associated length, so a length of 0.0 will be used.
342s   warn(
342s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:3287: RepresentationWarning: `TreeNode.tip_tip_distances`: Node with name 'g' does not have an associated length, so a length of 0.0 will be used.
342s   warn(
342s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:3287: RepresentationWarning: `TreeNode.tip_tip_distances`: Node with name None does not have an associated length, so a length of 0.0 will be used.
342s   warn(
342s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:3287: RepresentationWarning: `TreeNode.tip_tip_distances`: Node with name 'l' does not have an associated length, so a length of 0.0 will be used.
342s   warn(
342s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:3287: RepresentationWarning: `TreeNode.tip_tip_distances`: Node with name 'a' does not have an associated length, so a length of 0.0 will be used.
342s   warn(
342s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:3287: RepresentationWarning: `TreeNode.tip_tip_distances`: Node with name 'b' does not have an associated length, so a length of 0.0 will be used.
342s   warn(
343s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:3287: RepresentationWarning: `TreeNode.tip_tip_distances`: Node with name 'd' does not have an associated length, so a length of 0.0 will be used.
343s   warn(
343s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:3287: RepresentationWarning: `TreeNode.tip_tip_distances`: Node with name 'c' does not have an associated length, so a length of 0.0 will be used.
343s   warn(
343s ...
343s ----------------------------------------------------------------------
343s Ran 46 tests in 0.237s
343s 
343s OK
343s autopkgtest [14:56:27]: test run-unit-test: -----------------------]
344s autopkgtest [14:56:28]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
344s run-unit-test        PASS
345s autopkgtest [14:56:29]: @@@@@@@@@@@@@@@@@@@@ summary
345s run-unit-test        PASS
362s nova [W] Using flock in prodstack6-arm64
362s flock: timeout while waiting to get lock
362s Creating nova instance adt-plucky-arm64-python-iow-20250315-145044-juju-7f2275-prod-proposed-migration-environment-20-f9d4e999-42fc-4433-b201-989e17063135 from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)...
362s nova [W] Timed out waiting for 3d0e42fa-e81c-4dac-90cf-2162d9569a72 to get deleted.