0s autopkgtest [16:33:55]: starting date and time: 2024-11-14 16:33:55+0000 0s autopkgtest [16:33:55]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [16:33:55]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.efztg2jp/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy --apt-upgrade python-hmmlearn --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=numpy/1:1.26.4+ds-11ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-19.secgroup --name adt-plucky-arm64-python-hmmlearn-20241114-163355-juju-7f2275-prod-proposed-migration-environment-20-433613d5-3d01-42e3-bbad-2095cc4baaf9 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 76s autopkgtest [16:35:11]: testbed dpkg architecture: arm64 76s autopkgtest [16:35:11]: testbed apt version: 2.9.8 76s autopkgtest [16:35:11]: @@@@@@@@@@@@@@@@@@@@ test bed setup 77s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 77s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.6 kB] 77s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [951 kB] 77s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 77s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [105 kB] 77s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [136 kB] 77s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 77s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [711 kB] 77s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [5488 B] 77s Fetched 2054 kB in 1s (2277 kB/s) 78s Reading package lists... 80s Reading package lists... 80s Building dependency tree... 80s Reading state information... 81s Calculating upgrade... 81s The following packages will be upgraded: 81s libcap-ng0 pastebinit python3-systemd 81s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 81s Need to get 76.6 kB of archives. 81s After this operation, 349 kB of additional disk space will be used. 81s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libcap-ng0 arm64 0.8.5-3build1 [15.0 kB] 82s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pastebinit all 1.7.1-1 [14.9 kB] 82s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-systemd arm64 235-1build5 [46.7 kB] 82s Fetched 76.6 kB in 0s (220 kB/s) 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79925 files and directories currently installed.) 82s Preparing to unpack .../libcap-ng0_0.8.5-3build1_arm64.deb ... 82s Unpacking libcap-ng0:arm64 (0.8.5-3build1) over (0.8.5-1) ... 82s Setting up libcap-ng0:arm64 (0.8.5-3build1) ... 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79925 files and directories currently installed.) 82s Preparing to unpack .../pastebinit_1.7.1-1_all.deb ... 82s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ... 83s Preparing to unpack .../python3-systemd_235-1build5_arm64.deb ... 83s Unpacking python3-systemd (235-1build5) over (235-1build4) ... 83s Setting up pastebinit (1.7.1-1) ... 83s Setting up python3-systemd (235-1build5) ... 83s Processing triggers for man-db (2.12.1-3) ... 84s Processing triggers for libc-bin (2.40-1ubuntu3) ... 84s Reading package lists... 84s Building dependency tree... 84s Reading state information... 85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 85s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 85s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 85s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 85s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 86s Reading package lists... 86s Reading package lists... 87s Building dependency tree... 87s Reading state information... 88s Calculating upgrade... 88s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 88s Reading package lists... 89s Building dependency tree... 89s Reading state information... 89s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s autopkgtest [16:35:27]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 92s autopkgtest [16:35:27]: @@@@@@@@@@@@@@@@@@@@ apt-source python-hmmlearn 94s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-hmmlearn 0.3.2-2 (dsc) [2230 B] 94s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-hmmlearn 0.3.2-2 (tar) [75.2 kB] 94s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-hmmlearn 0.3.2-2 (diff) [4644 B] 94s gpgv: Signature made Mon Oct 7 08:45:37 2024 UTC 94s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 94s gpgv: Can't check signature: No public key 94s dpkg-source: warning: cannot verify inline signature for ./python-hmmlearn_0.3.2-2.dsc: no acceptable signature found 94s autopkgtest [16:35:29]: testing package python-hmmlearn version 0.3.2-2 95s autopkgtest [16:35:30]: build not needed 95s autopkgtest [16:35:30]: test pybuild-autopkgtest: preparing testbed 98s Reading package lists... 99s Building dependency tree... 99s Reading state information... 99s Starting pkgProblemResolver with broken count: 0 99s Starting 2 pkgProblemResolver with broken count: 0 99s Done 100s The following additional packages will be installed: 100s autoconf automake autopoint autotools-dev build-essential cpp cpp-14 100s cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper debugedit 100s dh-autoreconf dh-python dh-strip-nondeterminism dwz g++ g++-14 100s g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 100s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gettext intltool-debian 100s libarchive-zip-perl libasan8 libblas3 libcc1-0 libdebhelper-perl 100s libexpat1-dev libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5 100s libgomp1 libhwasan0 libisl23 libitm1 libjs-jquery libjs-sphinxdoc 100s libjs-underscore liblapack3 liblbfgsb0 liblsan0 libmpc3 libpython3-all-dev 100s libpython3-dev libpython3.12-dev libstdc++-14-dev libtool libtsan2 libubsan1 100s m4 po-debconf pybind11-dev pybuild-plugin-autopkgtest 100s pybuild-plugin-pyproject python3-all python3-all-dev python3-build 100s python3-decorator python3-dev python3-hmmlearn python3-iniconfig 100s python3-installer python3-joblib python3-numpy python3-packaging 100s python3-pluggy python3-pybind11 python3-pyproject-hooks python3-pytest 100s python3-scipy python3-setuptools-scm python3-sklearn python3-sklearn-lib 100s python3-threadpoolctl python3-toml python3-wheel python3.12-dev zlib1g-dev 100s Suggested packages: 100s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales 100s cpp-14-doc dh-make flit gcc-14-doc gcc-multilib manpages-dev flex bison gdb 100s gcc-doc gdb-aarch64-linux-gnu gettext-doc libasprintf-dev libgettextpo-dev 100s libstdc++-14-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc 100s libmail-box-perl pybind11-doc python3-pip python3-venv python-build-doc 100s python-installer-doc python-joblib-doc gfortran python-numpy-doc 100s python-scipy-doc python3-dap python-sklearn-doc ipython3 100s Recommended packages: 100s libarchive-cpio-perl javascript-common libltdl-dev libmail-sendmail-perl 100s libeigen3-dev python3-simplejson python3-psutil python3-pil 100s python3-matplotlib 100s The following NEW packages will be installed: 100s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 100s cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper 100s debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz g++ g++-14 100s g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 100s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gettext intltool-debian 100s libarchive-zip-perl libasan8 libblas3 libcc1-0 libdebhelper-perl 100s libexpat1-dev libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5 100s libgomp1 libhwasan0 libisl23 libitm1 libjs-jquery libjs-sphinxdoc 100s libjs-underscore liblapack3 liblbfgsb0 liblsan0 libmpc3 libpython3-all-dev 100s libpython3-dev libpython3.12-dev libstdc++-14-dev libtool libtsan2 libubsan1 100s m4 po-debconf pybind11-dev pybuild-plugin-autopkgtest 100s pybuild-plugin-pyproject python3-all python3-all-dev python3-build 100s python3-decorator python3-dev python3-hmmlearn python3-iniconfig 100s python3-installer python3-joblib python3-numpy python3-packaging 100s python3-pluggy python3-pybind11 python3-pyproject-hooks python3-pytest 100s python3-scipy python3-setuptools-scm python3-sklearn python3-sklearn-lib 100s python3-threadpoolctl python3-toml python3-wheel python3.12-dev zlib1g-dev 100s 0 upgraded, 82 newly installed, 0 to remove and 0 not upgraded. 100s Need to get 103 MB/103 MB of archives. 100s After this operation, 394 MB of additional disk space will be used. 100s Get:1 /tmp/autopkgtest.97sOk2/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [824 B] 100s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 m4 arm64 1.4.19-4build1 [240 kB] 100s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 autoconf all 2.72-3 [382 kB] 100s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 autotools-dev all 20220109.1 [44.9 kB] 100s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 automake all 1:1.16.5-1.3ubuntu1 [558 kB] 100s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 autopoint all 0.22.5-2 [616 kB] 100s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB] 101s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 101s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [10.6 MB] 101s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-8ubuntu1 [1028 B] 101s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B] 101s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB] 101s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-8ubuntu1 [49.7 kB] 101s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB] 101s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-8ubuntu1 [27.8 kB] 101s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-8ubuntu1 [2893 kB] 101s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-8ubuntu1 [1283 kB] 101s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-8ubuntu1 [2686 kB] 101s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-8ubuntu1 [1151 kB] 101s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-8ubuntu1 [1598 kB] 101s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-8ubuntu1 [2594 kB] 101s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [20.9 MB] 102s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-8ubuntu1 [518 kB] 102s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B] 102s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B] 102s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-8ubuntu1 [2476 kB] 102s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [12.1 MB] 102s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-8ubuntu1 [19.9 kB] 102s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B] 102s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B] 102s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 102s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 102s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libtool all 2.4.7-7build1 [166 kB] 102s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 dh-autoreconf all 20 [16.1 kB] 102s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB] 102s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 102s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 dh-strip-nondeterminism all 1.14.0-1 [5058 B] 102s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 debugedit arm64 1:5.1-1 [45.9 kB] 102s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 dwz arm64 0.15-1build6 [113 kB] 102s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 gettext arm64 0.22.5-2 [930 kB] 102s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] 102s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 po-debconf all 1.0.21+nmu1 [233 kB] 102s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 debhelper all 13.20ubuntu1 [893 kB] 102s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 dh-python all 6.20241024 [112 kB] 102s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 102s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libexpat1-dev arm64 2.6.2-2 [128 kB] 102s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 102s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 102s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 102s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-sphinxdoc all 7.4.7-4 [158 kB] 102s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 103s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 103s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 103s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.12-dev arm64 3.12.7-3 [5565 kB] 103s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3-dev arm64 3.12.6-0ubuntu1 [10.2 kB] 103s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3-all-dev arm64 3.12.6-0ubuntu1 [916 B] 103s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 pybind11-dev all 2.13.6-1 [168 kB] 103s Get:58 http://ftpmaster.internal/ubuntu plucky/universe arm64 pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 103s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 103s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 103s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-toml all 0.10.2-1 [16.5 kB] 103s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-wheel all 0.44.0-1 [54.2 kB] 103s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-build all 1.2.2-1 [31.0 kB] 103s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 103s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 pybuild-plugin-pyproject all 6.20241024 [1728 B] 103s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all arm64 3.12.6-0ubuntu1 [886 B] 103s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-dev arm64 3.12.7-3 [505 kB] 103s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dev arm64 3.12.6-0ubuntu1 [26.7 kB] 103s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all-dev arm64 3.12.6-0ubuntu1 [908 B] 103s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 103s Get:71 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-numpy arm64 1:1.26.4+ds-11ubuntu1 [4149 kB] 103s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB] 103s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-joblib all 1.3.2-5 [206 kB] 103s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-threadpoolctl all 3.1.0-1 [21.3 kB] 103s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sklearn-lib arm64 1.4.2+dfsg-6 [3806 kB] 104s Get:76 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sklearn all 1.4.2+dfsg-6 [2257 kB] 104s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-hmmlearn arm64 0.3.2-2 [120 kB] 104s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 104s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 104s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pybind11 all 2.13.6-1 [176 kB] 104s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 104s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-setuptools-scm all 8.1.0-1 [32.2 kB] 104s Fetched 103 MB in 4s (26.7 MB/s) 104s Selecting previously unselected package m4. 104s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79930 files and directories currently installed.) 104s Preparing to unpack .../00-m4_1.4.19-4build1_arm64.deb ... 104s Unpacking m4 (1.4.19-4build1) ... 104s Selecting previously unselected package autoconf. 104s Preparing to unpack .../01-autoconf_2.72-3_all.deb ... 104s Unpacking autoconf (2.72-3) ... 104s Selecting previously unselected package autotools-dev. 104s Preparing to unpack .../02-autotools-dev_20220109.1_all.deb ... 104s Unpacking autotools-dev (20220109.1) ... 104s Selecting previously unselected package automake. 104s Preparing to unpack .../03-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 104s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 104s Selecting previously unselected package autopoint. 104s Preparing to unpack .../04-autopoint_0.22.5-2_all.deb ... 104s Unpacking autopoint (0.22.5-2) ... 104s Selecting previously unselected package libisl23:arm64. 104s Preparing to unpack .../05-libisl23_0.27-1_arm64.deb ... 104s Unpacking libisl23:arm64 (0.27-1) ... 105s Selecting previously unselected package libmpc3:arm64. 105s Preparing to unpack .../06-libmpc3_1.3.1-1build2_arm64.deb ... 105s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 105s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 105s Preparing to unpack .../07-cpp-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ... 105s Selecting previously unselected package cpp-14. 105s Preparing to unpack .../08-cpp-14_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 105s Selecting previously unselected package cpp-aarch64-linux-gnu. 105s Preparing to unpack .../09-cpp-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 105s Unpacking cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 105s Selecting previously unselected package cpp. 105s Preparing to unpack .../10-cpp_4%3a14.1.0-2ubuntu1_arm64.deb ... 105s Unpacking cpp (4:14.1.0-2ubuntu1) ... 105s Selecting previously unselected package libcc1-0:arm64. 105s Preparing to unpack .../11-libcc1-0_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking libcc1-0:arm64 (14.2.0-8ubuntu1) ... 105s Selecting previously unselected package libgomp1:arm64. 105s Preparing to unpack .../12-libgomp1_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ... 105s Selecting previously unselected package libitm1:arm64. 105s Preparing to unpack .../13-libitm1_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking libitm1:arm64 (14.2.0-8ubuntu1) ... 105s Selecting previously unselected package libasan8:arm64. 105s Preparing to unpack .../14-libasan8_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking libasan8:arm64 (14.2.0-8ubuntu1) ... 105s Selecting previously unselected package liblsan0:arm64. 105s Preparing to unpack .../15-liblsan0_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking liblsan0:arm64 (14.2.0-8ubuntu1) ... 105s Selecting previously unselected package libtsan2:arm64. 105s Preparing to unpack .../16-libtsan2_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking libtsan2:arm64 (14.2.0-8ubuntu1) ... 105s Selecting previously unselected package libubsan1:arm64. 105s Preparing to unpack .../17-libubsan1_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking libubsan1:arm64 (14.2.0-8ubuntu1) ... 105s Selecting previously unselected package libhwasan0:arm64. 105s Preparing to unpack .../18-libhwasan0_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking libhwasan0:arm64 (14.2.0-8ubuntu1) ... 105s Selecting previously unselected package libgcc-14-dev:arm64. 105s Preparing to unpack .../19-libgcc-14-dev_14.2.0-8ubuntu1_arm64.deb ... 105s Unpacking libgcc-14-dev:arm64 (14.2.0-8ubuntu1) ... 106s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 106s Preparing to unpack .../20-gcc-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ... 106s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ... 106s Selecting previously unselected package gcc-14. 106s Preparing to unpack .../21-gcc-14_14.2.0-8ubuntu1_arm64.deb ... 106s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 106s Selecting previously unselected package gcc-aarch64-linux-gnu. 106s Preparing to unpack .../22-gcc-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ... 106s Unpacking gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 106s Selecting previously unselected package gcc. 106s Preparing to unpack .../23-gcc_4%3a14.1.0-2ubuntu1_arm64.deb ... 106s Unpacking gcc (4:14.1.0-2ubuntu1) ... 106s Selecting previously unselected package 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libfile-stripnondeterminism-perl (1.14.0-1) ... 107s Selecting previously unselected package dh-strip-nondeterminism. 107s Preparing to unpack .../35-dh-strip-nondeterminism_1.14.0-1_all.deb ... 107s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 107s Selecting previously unselected package debugedit. 107s Preparing to unpack .../36-debugedit_1%3a5.1-1_arm64.deb ... 107s Unpacking debugedit (1:5.1-1) ... 107s Selecting previously unselected package dwz. 107s Preparing to unpack .../37-dwz_0.15-1build6_arm64.deb ... 107s Unpacking dwz (0.15-1build6) ... 107s Selecting previously unselected package gettext. 107s Preparing to unpack .../38-gettext_0.22.5-2_arm64.deb ... 107s Unpacking gettext (0.22.5-2) ... 107s Selecting previously unselected package intltool-debian. 107s Preparing to unpack .../39-intltool-debian_0.35.0+20060710.6_all.deb ... 107s Unpacking intltool-debian (0.35.0+20060710.6) ... 107s Selecting previously unselected package po-debconf. 107s Preparing to unpack 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up libdebhelper-perl (13.20ubuntu1) ... 111s Setting up python3-threadpoolctl (3.1.0-1) ... 111s Setting up m4 (1.4.19-4build1) ... 111s Setting up python3-all (3.12.6-0ubuntu1) ... 111s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ... 111s Setting up python3-wheel (0.44.0-1) ... 111s Setting up python3-decorator (5.1.1-5) ... 111s Setting up autotools-dev (20220109.1) ... 111s Setting up libblas3:arm64 (3.12.0-3build2) ... 111s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 111s Setting up python3-packaging (24.1-1) ... 112s Setting up libexpat1-dev:arm64 (2.6.2-2) ... 112s Setting up python3-pyproject-hooks (1.2.0-1) ... 112s Setting up libmpc3:arm64 (1.3.1-1build2) ... 112s Setting up autopoint (0.22.5-2) ... 112s Setting up python3-toml (0.10.2-1) ... 112s Setting up python3-installer (0.7.0+dfsg1-3) ... 112s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 112s Setting up autoconf (2.72-3) ... 112s Setting up python3-pluggy (1.5.0-1) ... 112s Setting up libubsan1:arm64 (14.2.0-8ubuntu1) ... 112s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 112s Setting up dwz (0.15-1build6) ... 112s Setting up libhwasan0:arm64 (14.2.0-8ubuntu1) ... 112s Setting up libasan8:arm64 (14.2.0-8ubuntu1) ... 112s Setting up debugedit (1:5.1-1) ... 112s Setting up libtsan2:arm64 (14.2.0-8ubuntu1) ... 112s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 112s Setting up libisl23:arm64 (0.27-1) ... 112s Setting up python3-build (1.2.2-1) ... 112s Setting up libcc1-0:arm64 (14.2.0-8ubuntu1) ... 112s Setting up liblsan0:arm64 (14.2.0-8ubuntu1) ... 112s Setting up libitm1:arm64 (14.2.0-8ubuntu1) ... 112s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 112s Setting up automake (1:1.16.5-1.3ubuntu1) ... 112s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode 112s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... 112s Setting up liblapack3:arm64 (3.12.0-3build2) ... 112s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 112s Setting up gettext (0.22.5-2) ... 112s Setting up pybuild-plugin-pyproject (6.20241024) ... 112s Setting up python3-pytest (8.3.3-1) ... 113s Setting up libpython3.12-dev:arm64 (3.12.7-3) ... 113s Setting up python3-setuptools-scm (8.1.0-1) ... 113s Setting up intltool-debian (0.35.0+20060710.6) ... 113s Setting up python3.12-dev (3.12.7-3) ... 113s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ... 115s Setting up libjs-sphinxdoc (7.4.7-4) ... 115s Setting up dh-strip-nondeterminism (1.14.0-1) ... 115s Setting up cpp-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ... 115s Setting up libgcc-14-dev:arm64 (14.2.0-8ubuntu1) ... 115s Setting up libstdc++-14-dev:arm64 (14.2.0-8ubuntu1) ... 115s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 115s Setting up python3-scipy (1.13.1-5) ... 119s Setting up libpython3-dev:arm64 (3.12.6-0ubuntu1) ... 119s Setting up po-debconf (1.0.21+nmu1) ... 119s Setting up python3-sklearn-lib:arm64 (1.4.2+dfsg-6) ... 119s Setting up pybind11-dev (2.13.6-1) ... 119s Setting up cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 119s Setting up libpython3-all-dev:arm64 (3.12.6-0ubuntu1) ... 119s Setting up python3-dev (3.12.6-0ubuntu1) ... 119s Setting up python3-sklearn (1.4.2+dfsg-6) ... 121s Setting up cpp-14 (14.2.0-8ubuntu1) ... 121s Setting up cpp (4:14.1.0-2ubuntu1) ... 121s Setting up gcc-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ... 121s Setting up python3-pybind11 (2.13.6-1) ... 121s Setting up python3-all-dev (3.12.6-0ubuntu1) ... 121s Setting up gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 121s Setting up g++-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ... 121s Setting up python3-hmmlearn (0.3.2-2) ... 121s Setting up gcc-14 (14.2.0-8ubuntu1) ... 121s Setting up g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ... 121s Setting up g++-14 (14.2.0-8ubuntu1) ... 121s Setting up libtool (2.4.7-7build1) ... 121s Setting up gcc (4:14.1.0-2ubuntu1) ... 121s Setting up dh-autoreconf (20) ... 121s Setting up g++ (4:14.1.0-2ubuntu1) ... 121s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 121s Setting up build-essential (12.10ubuntu1) ... 121s Setting up debhelper (13.20ubuntu1) ... 121s Setting up pybuild-plugin-autopkgtest (6.20241024) ... 121s Setting up autopkgtest-satdep (0) ... 121s Processing triggers for man-db (2.12.1-3) ... 122s Processing triggers for install-info (7.1.1-1) ... 122s Processing triggers for libc-bin (2.40-1ubuntu3) ... 127s (Reading database ... 86504 files and directories currently installed.) 127s Removing autopkgtest-satdep (0) ... 127s autopkgtest [16:36:02]: test pybuild-autopkgtest: pybuild-autopkgtest 127s autopkgtest [16:36:02]: test pybuild-autopkgtest: [----------------------- 128s pybuild-autopkgtest 128s I: pybuild base:311: cd /tmp/autopkgtest.97sOk2/autopkgtest_tmp/build; python3.12 -m pytest --pyargs hmmlearn 130s ============================= test session starts ============================== 130s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 130s rootdir: /tmp/autopkgtest.97sOk2/autopkgtest_tmp/build 130s plugins: typeguard-4.4.1 130s set RNG seed to 1537887806 130s collected 320 items 130s 130s tests/test_base.py ................ [ 5%] 130s tests/test_categorical_hmm.py ...................... [ 11%] 133s tests/test_gaussian_hmm.py ............................................. [ 25%] 138s ..................................................... [ 42%] 139s tests/test_gmm_hmm.py xxxxxXxxxxxXxxxxxX [ 48%] 143s tests/test_gmm_hmm_multisequence.py ........ [ 50%] 153s tests/test_gmm_hmm_new.py ..............XX................XX............ [ 65%] 161s ....xX................Xx........ [ 75%] 161s tests/test_kl_divergence.py ..... [ 76%] 161s tests/test_multinomial_hmm.py ................ [ 81%] 163s tests/test_poisson_hmm.py ............ [ 85%] 163s tests/test_utils.py ... [ 86%] 164s tests/test_variational_categorical.py ............ [ 90%] 183s tests/test_variational_gaussian.py ................................ [100%] 183s 183s =============================== warnings summary =============================== 183s tests/test_gaussian_hmm.py: 1 warning 183s tests/test_gmm_hmm_multisequence.py: 5 warnings 183s tests/test_gmm_hmm_new.py: 12 warnings 183s tests/test_poisson_hmm.py: 1 warning 183s tests/test_variational_gaussian.py: 27 warnings 183s /usr/lib/python3/dist-packages/hmmlearn/base.py:509: RuntimeWarning: underflow encountered in multiply 183s posteriors = fwdlattice * bwdlattice 183s 183s tests/test_gaussian_hmm.py: 2 warnings 183s tests/test_gmm_hmm_multisequence.py: 4 warnings 183s tests/test_gmm_hmm_new.py: 13 warnings 183s tests/test_poisson_hmm.py: 1 warning 183s tests/test_variational_gaussian.py: 27 warnings 183s /usr/lib/python3/dist-packages/hmmlearn/utils.py:29: RuntimeWarning: underflow encountered in divide 183s a /= a_sum 183s 183s tests/test_gaussian_hmm.py::TestGaussianHMMWithFullCovars::test_fit[log] 183s tests/test_gaussian_hmm.py::TestGaussianHMMWithFullCovars::test_fit_with_length_one_signal[log] 183s /usr/lib/python3/dist-packages/hmmlearn/_emissions.py:153: RuntimeWarning: underflow encountered in matmul 183s stats['obs'] += posteriors.T @ X 183s 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithSphericalCovars::test_fit_zero_variance[scaling] 183s /usr/lib/python3/dist-packages/hmmlearn/base.py:598: RuntimeWarning: overflow encountered in exp 183s return np.exp(self._compute_log_likelihood(X)) 183s 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithSphericalCovars::test_fit_zero_variance[scaling] 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithSphericalCovars::test_fit_zero_variance[log] 183s /usr/lib/python3/dist-packages/hmmlearn/utils.py:55: RuntimeWarning: invalid value encountered in subtract 183s a -= a_lse 183s 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[scaling] 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log] 183s /usr/lib/python3/dist-packages/hmmlearn/hmm.py:744: RuntimeWarning: invalid value encountered in divide 183s self.weights_ = w_n / w_d 183s 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[scaling] 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log] 183s /usr/lib/python3/dist-packages/hmmlearn/hmm.py:756: RuntimeWarning: invalid value encountered in divide 183s self.means_ = m_n / m_d[:, :, None] 183s 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log] 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithTiedCovars::test_fit_zero_variance[scaling] 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithFullCovars::test_fit_zero_variance[log] 183s /usr/lib/python3/dist-packages/hmmlearn/hmm.py:809: RuntimeWarning: invalid value encountered in divide 183s self.covars_ = c_n / c_d 183s 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log] 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithFullCovars::test_fit_zero_variance[log] 183s /usr/lib/python3/dist-packages/hmmlearn/_emissions.py:208: RuntimeWarning: divide by zero encountered in log 183s log_cur_weights = np.log(self.weights_[i_comp]) 183s 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithTiedCovars::test_fit_zero_variance[scaling] 183s tests/test_gmm_hmm_new.py::TestGMMHMMWithTiedCovars::test_fit_zero_variance[log] 183s /usr/lib/python3/dist-packages/hmmlearn/hmm.py:809: RuntimeWarning: divide by zero encountered in divide 183s self.covars_ = c_n / c_d 183s 183s tests/test_variational_categorical.py: 10 warnings 183s tests/test_variational_gaussian.py: 20 warnings 183s /usr/lib/python3/dist-packages/hmmlearn/base.py:1215: RuntimeWarning: underflow encountered in exp 183s self.startprob_subnorm_ = np.exp(startprob_log_subnorm) 183s 183s tests/test_variational_categorical.py: 8 warnings 183s tests/test_variational_gaussian.py: 12 warnings 183s /usr/lib/python3/dist-packages/hmmlearn/base.py:1220: RuntimeWarning: underflow encountered in exp 183s self.transmat_subnorm_ = np.exp(transmat_log_subnorm) 183s 183s tests/test_variational_categorical.py: 1 warning 183s tests/test_variational_gaussian.py: 31 warnings 183s /usr/lib/python3/dist-packages/hmmlearn/base.py:1153: RuntimeWarning: underflow encountered in exp 183s return np.exp(self._compute_subnorm_log_likelihood(X)) 183s 183s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 183s ========== 294 passed, 17 xfailed, 9 xpassed, 191 warnings in 55.00s =========== 184s autopkgtest [16:36:59]: test pybuild-autopkgtest: -----------------------] 185s autopkgtest [16:37:00]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 185s pybuild-autopkgtest PASS 185s autopkgtest [16:37:00]: @@@@@@@@@@@@@@@@@@@@ summary 185s pybuild-autopkgtest PASS 197s nova [W] Skipping flock in bos03-arm64 197s Creating nova instance adt-plucky-arm64-python-hmmlearn-20241114-163355-juju-7f2275-prod-proposed-migration-environment-20-433613d5-3d01-42e3-bbad-2095cc4baaf9 from image adt/ubuntu-plucky-arm64-server-20241114.img (UUID 4472f5f7-859f-4441-9e8e-9550fb35f210)...