0s autopkgtest [10:32:11]: starting date and time: 2024-11-13 10:32:11+0000
  0s autopkgtest [10:32:11]: git checkout: 0acbae0a WIP show VirtSubproc stderr in real-time
  0s autopkgtest [10:32:11]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.e_z0cpwx/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-hmmlearn --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-29.secgroup --name adt-plucky-arm64-python-hmmlearn-20241113-103211-juju-7f2275-prod-proposed-migration-environment-2-4883b057-95e1-49d2-b7dd-5000475e78fc --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 74s autopkgtest [10:33:25]: testbed dpkg architecture: arm64
 75s autopkgtest [10:33:26]: testbed apt version: 2.9.8
 75s autopkgtest [10:33:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 76s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
 76s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB]
 76s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB]
 76s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB]
 76s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B]
 76s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB]
 76s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB]
 76s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB]
 76s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB]
 76s Fetched 1794 kB in 1s (2130 kB/s)
 77s Reading package lists...
 79s Reading package lists...
 80s Building dependency tree...
 80s Reading state information...
 81s Calculating upgrade...
 82s The following NEW packages will be installed:
 82s   python3.13-gdbm
 82s The following packages will be upgraded:
 82s   libpython3-stdlib python3 python3-gdbm python3-minimal
 82s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
 82s Need to get 101 kB of archives.
 82s After this operation, 141 kB of additional disk space will be used.
 82s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB]
 83s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB]
 83s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB]
 83s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB]
 83s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B]
 83s Fetched 101 kB in 0s (278 kB/s)
 84s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 79924 files and directories currently installed.)
 84s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ...
 84s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ...
 84s Setting up python3-minimal (3.12.7-1) ...
 84s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 60%
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 79924 files and directories currently installed.)
 84s Preparing to unpack .../python3_3.12.7-1_arm64.deb ...
 84s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ...
 84s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ...
 84s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ...
 84s Selecting previously unselected package python3.13-gdbm.
 84s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ...
 84s Unpacking python3.13-gdbm (3.13.0-2) ...
 84s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ...
 84s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ...
 84s Setting up python3.13-gdbm (3.13.0-2) ...
 84s Setting up libpython3-stdlib:arm64 (3.12.7-1) ...
 84s Setting up python3 (3.12.7-1) ...
 85s Setting up python3-gdbm:arm64 (3.12.7-1) ...
 85s Processing triggers for man-db (2.12.1-3) ...
 86s Reading package lists...
 86s Building dependency tree...
 86s Reading state information...
 87s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 87s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
 87s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
 87s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
 87s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
 89s Reading package lists...
 89s Reading package lists...
 90s Building dependency tree...
 90s Reading state information...
 91s Calculating upgrade...
 92s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 92s Reading package lists...
 92s Building dependency tree...
 92s Reading state information...
 93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 96s autopkgtest [10:33:47]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024
 97s autopkgtest [10:33:48]: @@@@@@@@@@@@@@@@@@@@ apt-source python-hmmlearn
 98s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-hmmlearn 0.3.2-2 (dsc) [2230 B]
 98s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-hmmlearn 0.3.2-2 (tar) [75.2 kB]
 98s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-hmmlearn 0.3.2-2 (diff) [4644 B]
 99s gpgv: Signature made Mon Oct  7 08:45:37 2024 UTC
 99s gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
 99s gpgv: Can't check signature: No public key
 99s dpkg-source: warning: cannot verify inline signature for ./python-hmmlearn_0.3.2-2.dsc: no acceptable signature found
 99s autopkgtest [10:33:50]: testing package python-hmmlearn version 0.3.2-2
100s autopkgtest [10:33:51]: build not needed
101s autopkgtest [10:33:52]: test pybuild-autopkgtest: preparing testbed
103s Reading package lists...
103s Building dependency tree...
103s Reading state information...
104s Starting pkgProblemResolver with broken count: 0
104s Starting 2 pkgProblemResolver with broken count: 0
104s Done
105s The following additional packages will be installed:
105s   autoconf automake autopoint autotools-dev build-essential cpp cpp-14
105s   cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper debugedit
105s   dh-autoreconf dh-python dh-strip-nondeterminism dwz g++ g++-14
105s   g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
105s   gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gettext intltool-debian
105s   libarchive-zip-perl libasan8 libblas3 libcc1-0 libdebhelper-perl
105s   libexpat1-dev libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5
105s   libgomp1 libhwasan0 libisl23 libitm1 libjs-jquery libjs-sphinxdoc
105s   libjs-underscore liblapack3 liblbfgsb0 liblsan0 libmpc3 libpython3-all-dev
105s   libpython3-dev libpython3.12-dev libpython3.13 libpython3.13-dev
105s   libpython3.13-minimal libpython3.13-stdlib libstdc++-14-dev libtool libtsan2
105s   libubsan1 m4 po-debconf pybind11-dev pybuild-plugin-autopkgtest
105s   pybuild-plugin-pyproject python3-all python3-all-dev python3-build
105s   python3-decorator python3-dev python3-hmmlearn python3-iniconfig
105s   python3-installer python3-joblib python3-numpy python3-packaging
105s   python3-pluggy python3-pybind11 python3-pyproject-hooks python3-pytest
105s   python3-scipy python3-setuptools-scm python3-sklearn python3-sklearn-lib
105s   python3-threadpoolctl python3-toml python3-wheel python3.12-dev python3.13
105s   python3.13-dev python3.13-minimal zlib1g-dev
105s Suggested packages:
105s   autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
105s   cpp-14-doc dh-make flit gcc-14-doc gcc-multilib manpages-dev flex bison gdb
105s   gcc-doc gdb-aarch64-linux-gnu gettext-doc libasprintf-dev libgettextpo-dev
105s   libstdc++-14-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
105s   libmail-box-perl pybind11-doc python3-pip python3-venv python-build-doc
105s   python-installer-doc python-joblib-doc gfortran python-numpy-doc
105s   python-scipy-doc python3-dap python-sklearn-doc ipython3 python3.13-venv
105s   python3.13-doc binfmt-support
105s Recommended packages:
105s   libarchive-cpio-perl javascript-common libltdl-dev libmail-sendmail-perl
105s   libeigen3-dev python3-simplejson python3-psutil python3-pil
105s   python3-matplotlib
105s The following NEW packages will be installed:
105s   autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential
105s   cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper
105s   debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz g++ g++-14
105s   g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
105s   gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gettext intltool-debian
105s   libarchive-zip-perl libasan8 libblas3 libcc1-0 libdebhelper-perl
105s   libexpat1-dev libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5
105s   libgomp1 libhwasan0 libisl23 libitm1 libjs-jquery libjs-sphinxdoc
105s   libjs-underscore liblapack3 liblbfgsb0 liblsan0 libmpc3 libpython3-all-dev
105s   libpython3-dev libpython3.12-dev libpython3.13 libpython3.13-dev
105s   libpython3.13-minimal libpython3.13-stdlib libstdc++-14-dev libtool libtsan2
105s   libubsan1 m4 po-debconf pybind11-dev pybuild-plugin-autopkgtest
105s   pybuild-plugin-pyproject python3-all python3-all-dev python3-build
105s   python3-decorator python3-dev python3-hmmlearn python3-iniconfig
105s   python3-installer python3-joblib python3-numpy python3-packaging
105s   python3-pluggy python3-pybind11 python3-pyproject-hooks python3-pytest
105s   python3-scipy python3-setuptools-scm python3-sklearn python3-sklearn-lib
105s   python3-threadpoolctl python3-toml python3-wheel python3.12-dev python3.13
105s   python3.13-dev python3.13-minimal zlib1g-dev
105s 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded.
105s Need to get 116 MB/116 MB of archives.
105s After this operation, 444 MB of additional disk space will be used.
105s Get:1 /tmp/autopkgtest.nEToaZ/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [824 B]
105s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB]
106s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB]
106s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 m4 arm64 1.4.19-4build1 [240 kB]
106s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 autoconf all 2.72-3 [382 kB]
106s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 autotools-dev all 20220109.1 [44.9 kB]
106s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 automake all 1:1.16.5-1.3ubuntu1 [558 kB]
106s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 autopoint all 0.22.5-2 [616 kB]
106s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
106s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
106s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [10.6 MB]
106s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-8ubuntu1 [1028 B]
106s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B]
106s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB]
106s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-8ubuntu1 [49.7 kB]
106s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB]
106s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-8ubuntu1 [27.8 kB]
106s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-8ubuntu1 [2893 kB]
106s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-8ubuntu1 [1283 kB]
106s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-8ubuntu1 [2686 kB]
106s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-8ubuntu1 [1151 kB]
106s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-8ubuntu1 [1598 kB]
107s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-8ubuntu1 [2594 kB]
107s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [20.9 MB]
107s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-8ubuntu1 [518 kB]
107s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B]
107s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B]
107s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-8ubuntu1 [2476 kB]
107s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [12.1 MB]
107s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-8ubuntu1 [19.9 kB]
107s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B]
107s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B]
107s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
107s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libdebhelper-perl all 13.20ubuntu1 [94.2 kB]
107s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libtool all 2.4.7-7build1 [166 kB]
107s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 dh-autoreconf all 20 [16.1 kB]
107s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB]
107s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB]
107s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 dh-strip-nondeterminism all 1.14.0-1 [5058 B]
107s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 debugedit arm64 1:5.1-1 [45.9 kB]
108s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 dwz arm64 0.15-1build6 [113 kB]
108s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 gettext arm64 0.22.5-2 [930 kB]
108s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 intltool-debian all 0.35.0+20060710.6 [23.2 kB]
108s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 po-debconf all 1.0.21+nmu1 [233 kB]
108s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 debhelper all 13.20ubuntu1 [893 kB]
108s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 dh-python all 6.20241024 [112 kB]
108s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB]
108s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libexpat1-dev arm64 2.6.2-2 [128 kB]
108s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB]
108s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
108s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB]
108s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-sphinxdoc all 7.4.7-4 [158 kB]
108s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB]
108s Get:54 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB]
108s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
108s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.12-dev arm64 3.12.7-3 [5565 kB]
108s Get:57 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-dev arm64 3.12.7-1 [10.3 kB]
108s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB]
108s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13 arm64 3.13.0-2 [2262 kB]
108s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-dev arm64 3.13.0-2 [5386 kB]
108s Get:61 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-all-dev arm64 3.12.7-1 [916 B]
108s Get:62 http://ftpmaster.internal/ubuntu plucky/universe arm64 pybind11-dev all 2.13.6-1 [168 kB]
108s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 pybuild-plugin-autopkgtest all 6.20241024 [1746 B]
108s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB]
108s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pyproject-hooks all 1.2.0-1 [10.2 kB]
108s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-toml all 0.10.2-1 [16.5 kB]
108s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-wheel all 0.44.0-1 [54.2 kB]
108s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-build all 1.2.2-1 [31.0 kB]
108s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-installer all 0.7.0+dfsg1-3 [17.4 kB]
108s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 pybuild-plugin-pyproject all 6.20241024 [1728 B]
108s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB]
108s Get:72 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B]
108s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-dev arm64 3.12.7-3 [505 kB]
108s Get:74 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-dev arm64 3.12.7-1 [26.7 kB]
108s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-dev arm64 3.13.0-2 [507 kB]
108s Get:76 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all-dev arm64 3.12.7-1 [914 B]
108s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB]
108s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB]
108s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB]
109s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-joblib all 1.3.2-5 [206 kB]
109s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-threadpoolctl all 3.1.0-1 [21.3 kB]
109s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sklearn-lib arm64 1.4.2+dfsg-6 [3806 kB]
109s Get:83 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sklearn all 1.4.2+dfsg-6 [2257 kB]
109s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-hmmlearn arm64 0.3.2-2 [120 kB]
109s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B]
109s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB]
109s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pybind11 all 2.13.6-1 [176 kB]
109s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB]
109s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-setuptools-scm all 8.1.0-1 [32.2 kB]
109s Fetched 116 MB in 4s (31.8 MB/s)
109s Selecting previously unselected package libpython3.13-minimal:arm64.
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110s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ...
110s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ...
110s Selecting previously unselected package python3.13-minimal.
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110s Selecting previously unselected package m4.
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110s Selecting previously unselected package libisl23:arm64.
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110s Selecting previously unselected package cpp-14-aarch64-linux-gnu.
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112s Selecting previously unselected package libstdc++-14-dev:arm64.
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115s Selecting previously unselected package liblapack3:arm64.
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115s Selecting previously unselected package libpython3.12-dev:arm64.
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119s Setting up dh-python (6.20241024) ...
119s Setting up python3-iniconfig (1.1.1-2) ...
119s Setting up python3-joblib (1.3.2-5) ...
120s Setting up libarchive-zip-perl (1.68-1) ...
120s Setting up libdebhelper-perl (13.20ubuntu1) ...
120s Setting up python3-threadpoolctl (3.1.0-1) ...
120s Setting up m4 (1.4.19-4build1) ...
120s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ...
120s Setting up python3-wheel (0.44.0-1) ...
120s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ...
120s Setting up python3-decorator (5.1.1-5) ...
121s Setting up autotools-dev (20220109.1) ...
121s Setting up libblas3:arm64 (3.12.0-3build2) ...
121s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
121s Setting up python3-packaging (24.1-1) ...
121s Setting up libexpat1-dev:arm64 (2.6.2-2) ...
121s Setting up python3-pyproject-hooks (1.2.0-1) ...
121s Setting up libmpc3:arm64 (1.3.1-1build2) ...
121s Setting up autopoint (0.22.5-2) ...
121s Setting up python3-toml (0.10.2-1) ...
122s Setting up python3-installer (0.7.0+dfsg1-3) ...
122s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ...
122s Setting up autoconf (2.72-3) ...
122s Setting up python3-pluggy (1.5.0-1) ...
122s Setting up libubsan1:arm64 (14.2.0-8ubuntu1) ...
122s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
122s Setting up dwz (0.15-1build6) ...
122s Setting up libhwasan0:arm64 (14.2.0-8ubuntu1) ...
122s Setting up libasan8:arm64 (14.2.0-8ubuntu1) ...
122s Setting up debugedit (1:5.1-1) ...
122s Setting up python3.13-minimal (3.13.0-2) ...
123s Setting up libtsan2:arm64 (14.2.0-8ubuntu1) ...
123s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
123s Setting up libisl23:arm64 (0.27-1) ...
123s Setting up python3-build (1.2.2-1) ...
124s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ...
124s Setting up libcc1-0:arm64 (14.2.0-8ubuntu1) ...
124s Setting up liblsan0:arm64 (14.2.0-8ubuntu1) ...
124s Setting up libitm1:arm64 (14.2.0-8ubuntu1) ...
124s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
124s Setting up libpython3.13:arm64 (3.13.0-2) ...
124s Setting up automake (1:1.16.5-1.3ubuntu1) ...
124s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
124s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
124s Setting up liblapack3:arm64 (3.12.0-3build2) ...
124s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
124s Setting up gettext (0.22.5-2) ...
124s Setting up python3.13 (3.13.0-2) ...
125s Setting up pybuild-plugin-pyproject (6.20241024) ...
125s Setting up python3-pytest (8.3.3-1) ...
126s Setting up python3-all (3.12.7-1) ...
126s Setting up libpython3.12-dev:arm64 (3.12.7-3) ...
126s Setting up python3-setuptools-scm (8.1.0-1) ...
126s Setting up intltool-debian (0.35.0+20060710.6) ...
126s Setting up libpython3.13-dev:arm64 (3.13.0-2) ...
126s Setting up python3.12-dev (3.12.7-3) ...
126s Setting up python3-numpy (1:1.26.4+ds-11build1) ...
131s Setting up libjs-sphinxdoc (7.4.7-4) ...
131s Setting up dh-strip-nondeterminism (1.14.0-1) ...
131s Setting up cpp-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
131s Setting up libgcc-14-dev:arm64 (14.2.0-8ubuntu1) ...
131s Setting up libstdc++-14-dev:arm64 (14.2.0-8ubuntu1) ...
131s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ...
131s Setting up python3-scipy (1.13.1-5) ...
139s Setting up libpython3-dev:arm64 (3.12.7-1) ...
139s Setting up python3.13-dev (3.13.0-2) ...
139s Setting up po-debconf (1.0.21+nmu1) ...
139s Setting up python3-sklearn-lib:arm64 (1.4.2+dfsg-6) ...
139s Setting up pybind11-dev (2.13.6-1) ...
139s Setting up cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
139s Setting up libpython3-all-dev:arm64 (3.12.7-1) ...
139s Setting up python3-dev (3.12.7-1) ...
139s Setting up python3-sklearn (1.4.2+dfsg-6) ...
143s Setting up cpp-14 (14.2.0-8ubuntu1) ...
143s Setting up cpp (4:14.1.0-2ubuntu1) ...
143s Setting up gcc-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
143s Setting up python3-pybind11 (2.13.6-1) ...
143s Setting up python3-all-dev (3.12.7-1) ...
143s Setting up gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
143s Setting up g++-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
143s Setting up python3-hmmlearn (0.3.2-2) ...
144s Setting up gcc-14 (14.2.0-8ubuntu1) ...
144s Setting up g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
144s Setting up g++-14 (14.2.0-8ubuntu1) ...
144s Setting up libtool (2.4.7-7build1) ...
144s Setting up gcc (4:14.1.0-2ubuntu1) ...
144s Setting up dh-autoreconf (20) ...
144s Setting up g++ (4:14.1.0-2ubuntu1) ...
144s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
144s Setting up build-essential (12.10ubuntu1) ...
144s Setting up debhelper (13.20ubuntu1) ...
144s Setting up pybuild-plugin-autopkgtest (6.20241024) ...
144s Setting up autopkgtest-satdep (0) ...
144s Processing triggers for systemd (256.5-2ubuntu4) ...
144s Processing triggers for man-db (2.12.1-3) ...
145s Processing triggers for install-info (7.1.1-1) ...
145s Processing triggers for libc-bin (2.40-1ubuntu3) ...
150s (Reading database ... 87530 files and directories currently installed.)
150s Removing autopkgtest-satdep (0) ...
150s autopkgtest [10:34:41]: test pybuild-autopkgtest: pybuild-autopkgtest
150s autopkgtest [10:34:41]: test pybuild-autopkgtest: [-----------------------
151s pybuild-autopkgtest
151s I: pybuild base:311: cd /tmp/autopkgtest.nEToaZ/autopkgtest_tmp/build; python3.13 -m pytest --pyargs hmmlearn
153s ============================= test session starts ==============================
153s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0
153s rootdir: /tmp/autopkgtest.nEToaZ/autopkgtest_tmp/build
153s plugins: typeguard-4.4.1
153s collected 0 items / 1 error
153s 
153s ==================================== ERRORS ====================================
153s ____________________________ ERROR collecting tests ____________________________
153s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
153s     from . import multiarray
153s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
153s     from . import overrides
153s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
153s     from numpy.core._multiarray_umath import (
153s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
153s 
153s During handling of the above exception, another exception occurred:
153s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
153s     from numpy.__config__ import show as show_config
153s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
153s     from numpy.core._multiarray_umath import (
153s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
153s     raise ImportError(msg)
153s E   ImportError: 
153s E   
153s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
153s E   
153s E   Importing the numpy C-extensions failed. This error can happen for
153s E   many reasons, often due to issues with your setup or how NumPy was
153s E   installed.
153s E   
153s E   We have compiled some common reasons and troubleshooting tips at:
153s E   
153s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
153s E   
153s E   Please note and check the following:
153s E   
153s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
153s E     * The NumPy version is: "1.26.4"
153s E   
153s E   and make sure that they are the versions you expect.
153s E   Please carefully study the documentation linked above for further help.
153s E   
153s E   Original error was: No module named 'numpy.core._multiarray_umath'
153s 
153s The above exception was the direct cause of the following exception:
153s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
153s     return _bootstrap._gcd_import(name[level:], package, level)
153s <frozen importlib._bootstrap>:1387: in _gcd_import
153s     ???
153s <frozen importlib._bootstrap>:1360: in _find_and_load
153s     ???
153s <frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
153s     ???
153s <frozen importlib._bootstrap>:488: in _call_with_frames_removed
153s     ???
153s <frozen importlib._bootstrap>:1387: in _gcd_import
153s     ???
153s <frozen importlib._bootstrap>:1360: in _find_and_load
153s     ???
153s <frozen importlib._bootstrap>:1331: in _find_and_load_unlocked
153s     ???
153s <frozen importlib._bootstrap>:935: in _load_unlocked
153s     ???
153s <frozen importlib._bootstrap_external>:1022: in exec_module
153s     ???
153s <frozen importlib._bootstrap>:488: in _call_with_frames_removed
153s     ???
153s /usr/lib/python3/dist-packages/hmmlearn/tests/__init__.py:1: in <module>
153s     import numpy as np
153s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
153s     raise ImportError(msg) from e
153s E   ImportError: Error importing numpy: you should not try to import numpy from
153s E           its source directory; please exit the numpy source tree, and relaunch
153s E           your python interpreter from there.
153s =========================== short test summary info ============================
153s ERROR tests - ImportError: Error importing numpy: you should not try to impor...
153s !!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!!
153s =============================== 1 error in 1.04s ===============================
153s E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=2: cd /tmp/autopkgtest.nEToaZ/autopkgtest_tmp/build; python3.13 -m pytest --pyargs hmmlearn
153s I: pybuild base:311: cd /tmp/autopkgtest.nEToaZ/autopkgtest_tmp/build; python3.12 -m pytest --pyargs hmmlearn
157s ============================= test session starts ==============================
157s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0
157s rootdir: /tmp/autopkgtest.nEToaZ/autopkgtest_tmp/build
157s plugins: typeguard-4.4.1
157s set RNG seed to 731887365
157s collected 320 items
157s 
157s tests/test_base.py ................                                      [  5%]
157s tests/test_categorical_hmm.py ......................                     [ 11%]
162s tests/test_gaussian_hmm.py ............................................. [ 25%]
168s .............................F.......................                    [ 42%]
169s tests/test_gmm_hmm.py xxxxxXxxxxxXxxxxxX                                 [ 48%]
173s tests/test_gmm_hmm_multisequence.py ........                             [ 50%]
183s tests/test_gmm_hmm_new.py ..............XX................XX............ [ 65%]
191s ....xX................Xx........                                         [ 75%]
191s tests/test_kl_divergence.py .....                                        [ 76%]
191s tests/test_multinomial_hmm.py ................                           [ 81%]
192s tests/test_poisson_hmm.py ............                                   [ 85%]
192s tests/test_utils.py ...                                                  [ 86%]
194s tests/test_variational_categorical.py ............                       [ 90%]
212s tests/test_variational_gaussian.py ................................      [100%]
212s 
212s =================================== FAILURES ===================================
212s _________ TestGaussianHMMWithTiedCovars.test_fit_with_priors[scaling] __________
212s 
212s self = <hmmlearn.tests.test_gaussian_hmm.TestGaussianHMMWithTiedCovars object at 0xec68ca832120>
212s implementation = 'scaling', init_params = 'mc', params = 'stmc', n_iter = 20
212s 
212s     @pytest.mark.parametrize("implementation", ["scaling", "log"])
212s     def test_fit_with_priors(self, implementation, init_params='mc',
212s                              params='stmc', n_iter=20):
212s         # We have a few options to make this a robust test, such as
212s         # a. increase the amount of training data to ensure convergence
212s         # b. Only learn some of the parameters (simplify the problem)
212s         # c. Increase the number of iterations
212s         #
212s         # (c) seems to not affect the ci/cd time too much.
212s         startprob_prior = 10 * self.startprob + 2.0
212s         transmat_prior = 10 * self.transmat + 2.0
212s         means_prior = self.means
212s         means_weight = 2.0
212s         covars_weight = 2.0
212s         if self.covariance_type in ('full', 'tied'):
212s             covars_weight += self.n_features
212s         covars_prior = self.covars
212s         h = hmm.GaussianHMM(self.n_components, self.covariance_type,
212s                             implementation=implementation)
212s         h.startprob_ = self.startprob
212s         h.startprob_prior = startprob_prior
212s         h.transmat_ = normalized(
212s             self.transmat + np.diag(self.prng.rand(self.n_components)), 1)
212s         h.transmat_prior = transmat_prior
212s         h.means_ = 20 * self.means
212s         h.means_prior = means_prior
212s         h.means_weight = means_weight
212s         h.covars_ = self.covars
212s         h.covars_prior = covars_prior
212s         h.covars_weight = covars_weight
212s     
212s         lengths = [200] * 10
212s         X, _state_sequence = h.sample(sum(lengths), random_state=self.prng)
212s     
212s         # Re-initialize the parameters and check that we can converge to
212s         # the original parameter values.
212s         h_learn = hmm.GaussianHMM(self.n_components, self.covariance_type,
212s                                   init_params=init_params, params=params,
212s                                   implementation=implementation,)
212s         # don't use random parameters for testing
212s         init = 1. / h_learn.n_components
212s         h_learn.startprob_ = np.full(h_learn.n_components, init)
212s         h_learn.transmat_ = \
212s             np.full((h_learn.n_components, h_learn.n_components), init)
212s     
212s         h_learn.n_iter = 0
212s         h_learn.fit(X, lengths=lengths)
212s     
212s         assert_log_likelihood_increasing(h_learn, X, lengths, n_iter)
212s     
212s         # Make sure we've converged to the right parameters.
212s         # In general, to account for state switching,
212s         # compare sorted values.
212s         # a) means
212s         assert_allclose(sorted(h.means_.ravel().tolist()),
212s                         sorted(h_learn.means_.ravel().tolist()),
212s                         0.01)
212s         # b) covars are hard to estimate precisely from a relatively small
212s         #    sample, thus the large threshold
212s     
212s         # account for how we store the covars_compressed
212s         orig = np.broadcast_to(h._covars_, h_learn._covars_.shape)
212s >       assert_allclose(
212s             sorted(orig.ravel().tolist()),
212s             sorted(h_learn._covars_.ravel().tolist()),
212s             10)
212s 
212s /usr/lib/python3/dist-packages/hmmlearn/tests/test_gaussian_hmm.py:251: 
212s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
212s 
212s args = (<function assert_allclose.<locals>.compare at 0xec68ca5c8f40>, array([-0.15138435, -0.15138435, -0.06169341, -0.06169..., -4.98393448e-02,
212s        -3.94211091e-04, -3.94211091e-04,  4.57398160e-01,  5.84915016e-01,
212s         3.37815344e+00]))
212s kwds = {'equal_nan': True, 'err_msg': '', 'header': 'Not equal to tolerance rtol=10, atol=0', 'verbose': True}
212s 
212s     @wraps(func)
212s     def inner(*args, **kwds):
212s         with self._recreate_cm():
212s >           return func(*args, **kwds)
212s E           AssertionError: 
212s E           Not equal to tolerance rtol=10, atol=0
212s E           
212s E           Mismatched elements: 2 / 9 (22.2%)
212s E           Max absolute difference: 0.1387462
212s E           Max relative difference: 19.28372485
212s E            x: array([-0.151384, -0.151384, -0.061693, -0.061693, -0.007996, -0.007996,
212s E                   0.439324,  0.596011,  3.5169  ])
212s E            y: array([-1.626581e-01, -1.626581e-01, -4.983934e-02, -4.983934e-02,
212s E                  -3.942111e-04, -3.942111e-04,  4.573982e-01,  5.849150e-01,
212s E                   3.378153e+00])
212s 
212s /usr/lib/python3.12/contextlib.py:81: AssertionError
212s =============================== warnings summary ===============================
212s tests/test_gaussian_hmm.py: 1 warning
212s tests/test_gmm_hmm_multisequence.py: 5 warnings
212s tests/test_gmm_hmm_new.py: 12 warnings
212s tests/test_poisson_hmm.py: 1 warning
212s tests/test_variational_gaussian.py: 27 warnings
212s   /usr/lib/python3/dist-packages/hmmlearn/base.py:509: RuntimeWarning: underflow encountered in multiply
212s     posteriors = fwdlattice * bwdlattice
212s 
212s tests/test_gmm_hmm_multisequence.py: 4 warnings
212s tests/test_gmm_hmm_new.py: 13 warnings
212s tests/test_poisson_hmm.py: 1 warning
212s tests/test_variational_gaussian.py: 27 warnings
212s   /usr/lib/python3/dist-packages/hmmlearn/utils.py:29: RuntimeWarning: underflow encountered in divide
212s     a /= a_sum
212s 
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithSphericalCovars::test_fit_zero_variance[scaling]
212s   /usr/lib/python3/dist-packages/hmmlearn/base.py:598: RuntimeWarning: overflow encountered in exp
212s     return np.exp(self._compute_log_likelihood(X))
212s 
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithSphericalCovars::test_fit_zero_variance[scaling]
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithSphericalCovars::test_fit_zero_variance[log]
212s   /usr/lib/python3/dist-packages/hmmlearn/utils.py:55: RuntimeWarning: invalid value encountered in subtract
212s     a -= a_lse
212s 
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[scaling]
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log]
212s   /usr/lib/python3/dist-packages/hmmlearn/hmm.py:744: RuntimeWarning: invalid value encountered in divide
212s     self.weights_ = w_n / w_d
212s 
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[scaling]
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log]
212s   /usr/lib/python3/dist-packages/hmmlearn/hmm.py:756: RuntimeWarning: invalid value encountered in divide
212s     self.means_ = m_n / m_d[:, :, None]
212s 
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log]
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithTiedCovars::test_fit_zero_variance[scaling]
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithFullCovars::test_fit_zero_variance[log]
212s   /usr/lib/python3/dist-packages/hmmlearn/hmm.py:809: RuntimeWarning: invalid value encountered in divide
212s     self.covars_ = c_n / c_d
212s 
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log]
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithFullCovars::test_fit_zero_variance[log]
212s   /usr/lib/python3/dist-packages/hmmlearn/_emissions.py:208: RuntimeWarning: divide by zero encountered in log
212s     log_cur_weights = np.log(self.weights_[i_comp])
212s 
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithTiedCovars::test_fit_zero_variance[scaling]
212s tests/test_gmm_hmm_new.py::TestGMMHMMWithTiedCovars::test_fit_zero_variance[log]
212s   /usr/lib/python3/dist-packages/hmmlearn/hmm.py:809: RuntimeWarning: divide by zero encountered in divide
212s     self.covars_ = c_n / c_d
212s 
212s tests/test_variational_categorical.py: 10 warnings
212s tests/test_variational_gaussian.py: 20 warnings
212s   /usr/lib/python3/dist-packages/hmmlearn/base.py:1215: RuntimeWarning: underflow encountered in exp
212s     self.startprob_subnorm_ = np.exp(startprob_log_subnorm)
212s 
212s tests/test_variational_categorical.py: 8 warnings
212s tests/test_variational_gaussian.py: 12 warnings
212s   /usr/lib/python3/dist-packages/hmmlearn/base.py:1220: RuntimeWarning: underflow encountered in exp
212s     self.transmat_subnorm_ = np.exp(transmat_log_subnorm)
212s 
212s tests/test_variational_categorical.py: 1 warning
212s tests/test_variational_gaussian.py: 31 warnings
212s   /usr/lib/python3/dist-packages/hmmlearn/base.py:1153: RuntimeWarning: underflow encountered in exp
212s     return np.exp(self._compute_subnorm_log_likelihood(X))
212s 
212s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
212s =========================== short test summary info ============================
212s FAILED tests/test_gaussian_hmm.py::TestGaussianHMMWithTiedCovars::test_fit_with_priors[scaling]
212s ===== 1 failed, 293 passed, 17 xfailed, 9 xpassed, 187 warnings in 57.81s ======
212s E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd /tmp/autopkgtest.nEToaZ/autopkgtest_tmp/build; python3.12 -m pytest --pyargs hmmlearn
212s pybuild-autopkgtest: error: pybuild --autopkgtest --test-pytest -i python{version} -p "3.13 3.12" returned exit code 13
212s make: *** [/tmp/29iFYgw1aK/run:4: pybuild-autopkgtest] Error 25
212s pybuild-autopkgtest: error: /tmp/29iFYgw1aK/run pybuild-autopkgtest returned exit code 2
212s autopkgtest [10:35:43]: test pybuild-autopkgtest: -----------------------]
213s pybuild-autopkgtest  FAIL non-zero exit status 25
213s autopkgtest [10:35:44]: test pybuild-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
213s autopkgtest [10:35:44]: @@@@@@@@@@@@@@@@@@@@ summary
213s pybuild-autopkgtest  FAIL non-zero exit status 25
226s virt: nova [W] Skipping flock in bos03-arm64
226s virt: Creating nova instance adt-plucky-arm64-python-hmmlearn-20241113-103211-juju-7f2275-prod-proposed-migration-environment-2-4883b057-95e1-49d2-b7dd-5000475e78fc from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...