0s autopkgtest [10:31:53]: starting date and time: 2024-11-13 10:31:53+0000 0s autopkgtest [10:31:53]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [10:31:53]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.2jj80rzr/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-hdmedians --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-50.secgroup --name adt-plucky-arm64-python-hdmedians-20241113-103153-juju-7f2275-prod-proposed-migration-environment-15-11a02a32-6200-44eb-b4d5-9882c02dc2b9 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 88s autopkgtest [10:33:21]: testbed dpkg architecture: arm64 89s autopkgtest [10:33:22]: testbed apt version: 2.9.8 89s autopkgtest [10:33:22]: @@@@@@@@@@@@@@@@@@@@ test bed setup 90s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 91s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 91s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 91s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 91s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 91s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 91s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 91s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 91s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 91s Fetched 1794 kB in 1s (1728 kB/s) 91s Reading package lists... 96s Reading package lists... 97s Building dependency tree... 97s Reading state information... 98s Calculating upgrade... 99s The following NEW packages will be installed: 99s python3.13-gdbm 99s The following packages will be upgraded: 99s libpython3-stdlib python3 python3-gdbm python3-minimal 99s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 99s Need to get 101 kB of archives. 99s After this operation, 141 kB of additional disk space will be used. 99s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 99s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 99s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 99s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 99s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 100s Fetched 101 kB in 0s (267 kB/s) 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 100s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 100s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 100s Setting up python3-minimal (3.12.7-1) ... 101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 101s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 101s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 101s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 101s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 101s Selecting previously unselected package python3.13-gdbm. 101s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 101s Unpacking python3.13-gdbm (3.13.0-2) ... 101s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 101s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 101s Setting up python3.13-gdbm (3.13.0-2) ... 101s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 101s Setting up python3 (3.12.7-1) ... 101s Setting up python3-gdbm:arm64 (3.12.7-1) ... 101s Processing triggers for man-db (2.12.1-3) ... 102s Reading package lists... 103s Building dependency tree... 103s Reading state information... 103s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 104s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 104s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 104s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 104s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 106s Reading package lists... 106s Reading package lists... 106s Building dependency tree... 106s Reading state information... 107s Calculating upgrade... 107s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 107s Reading package lists... 108s Building dependency tree... 108s Reading state information... 109s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 112s autopkgtest [10:33:45]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 112s autopkgtest [10:33:45]: @@@@@@@@@@@@@@@@@@@@ apt-source python-hdmedians 114s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-hdmedians 0.14.2-5.1build1 (dsc) [2251 B] 114s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-hdmedians 0.14.2-5.1build1 (tar) [109 kB] 114s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-hdmedians 0.14.2-5.1build1 (diff) [3660 B] 115s gpgv: Signature made Wed Apr 10 18:32:59 2024 UTC 115s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 115s gpgv: Can't check signature: No public key 115s dpkg-source: warning: cannot verify inline signature for ./python-hdmedians_0.14.2-5.1build1.dsc: no acceptable signature found 115s autopkgtest [10:33:48]: testing package python-hdmedians version 0.14.2-5.1build1 118s autopkgtest [10:33:51]: build not needed 121s autopkgtest [10:33:54]: test run-unit-test: preparing testbed 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 126s Starting pkgProblemResolver with broken count: 0 126s Starting 2 pkgProblemResolver with broken count: 0 126s Done 128s The following additional packages will be installed: 128s libblas3 libgfortran5 liblapack3 libpython3.13-minimal libpython3.13-stdlib 128s python3-all python3-hdmedians python3-iniconfig python3-numpy 128s python3-packaging python3-pluggy python3-pytest python3.13 128s python3.13-minimal 128s Suggested packages: 128s gcc gfortran python-numpy-doc python3-dev python3.13-venv python3.13-doc 128s binfmt-support 128s The following NEW packages will be installed: 128s autopkgtest-satdep libblas3 libgfortran5 liblapack3 libpython3.13-minimal 128s libpython3.13-stdlib python3-all python3-hdmedians python3-iniconfig 128s python3-numpy python3-packaging python3-pluggy python3-pytest python3.13 128s python3.13-minimal 128s 0 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. 128s Need to get 12.7 MB/12.7 MB of archives. 128s After this operation, 53.6 MB of additional disk space will be used. 128s Get:1 /tmp/autopkgtest.PPeovi/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [720 B] 128s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 129s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 129s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 129s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 129s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 129s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 129s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 129s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 129s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 129s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-hdmedians arm64 0.14.2-5.1build1 [116 kB] 129s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 129s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 129s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 129s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 130s Fetched 12.7 MB in 1s (12.2 MB/s) 130s Selecting previously unselected package libpython3.13-minimal:arm64. 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 130s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ... 130s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 130s Selecting previously unselected package python3.13-minimal. 130s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_arm64.deb ... 130s Unpacking python3.13-minimal (3.13.0-2) ... 130s Selecting previously unselected package libblas3:arm64. 130s Preparing to unpack .../02-libblas3_3.12.0-3build2_arm64.deb ... 130s Unpacking libblas3:arm64 (3.12.0-3build2) ... 130s Selecting previously unselected package libgfortran5:arm64. 130s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 130s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 130s Selecting previously unselected package liblapack3:arm64. 130s Preparing to unpack .../04-liblapack3_3.12.0-3build2_arm64.deb ... 130s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 130s Selecting previously unselected package libpython3.13-stdlib:arm64. 130s Preparing to unpack .../05-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 130s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 130s Selecting previously unselected package python3.13. 130s Preparing to unpack .../06-python3.13_3.13.0-2_arm64.deb ... 130s Unpacking python3.13 (3.13.0-2) ... 130s Selecting previously unselected package python3-all. 130s Preparing to unpack .../07-python3-all_3.12.7-1_arm64.deb ... 130s Unpacking python3-all (3.12.7-1) ... 130s Selecting previously unselected package python3-numpy. 130s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 130s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 131s Selecting previously unselected package python3-hdmedians. 131s Preparing to unpack .../09-python3-hdmedians_0.14.2-5.1build1_arm64.deb ... 131s Unpacking python3-hdmedians (0.14.2-5.1build1) ... 131s Selecting previously unselected package python3-iniconfig. 131s Preparing to unpack .../10-python3-iniconfig_1.1.1-2_all.deb ... 131s Unpacking python3-iniconfig (1.1.1-2) ... 131s Selecting previously unselected package python3-packaging. 131s Preparing to unpack .../11-python3-packaging_24.1-1_all.deb ... 131s Unpacking python3-packaging (24.1-1) ... 131s Selecting previously unselected package python3-pluggy. 131s Preparing to unpack .../12-python3-pluggy_1.5.0-1_all.deb ... 131s Unpacking python3-pluggy (1.5.0-1) ... 131s Selecting previously unselected package python3-pytest. 131s Preparing to unpack .../13-python3-pytest_8.3.3-1_all.deb ... 131s Unpacking python3-pytest (8.3.3-1) ... 131s Selecting previously unselected package autopkgtest-satdep. 131s Preparing to unpack .../14-1-autopkgtest-satdep.deb ... 131s Unpacking autopkgtest-satdep (0) ... 131s Setting up python3-iniconfig (1.1.1-2) ... 131s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 131s Setting up libblas3:arm64 (3.12.0-3build2) ... 131s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 131s Setting up python3-packaging (24.1-1) ... 132s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 132s Setting up python3-pluggy (1.5.0-1) ... 132s Setting up python3.13-minimal (3.13.0-2) ... 133s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 133s Setting up liblapack3:arm64 (3.12.0-3build2) ... 133s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 133s Setting up python3.13 (3.13.0-2) ... 134s Setting up python3-pytest (8.3.3-1) ... 135s Setting up python3-all (3.12.7-1) ... 135s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 140s Setting up python3-hdmedians (0.14.2-5.1build1) ... 140s Setting up autopkgtest-satdep (0) ... 140s Processing triggers for systemd (256.5-2ubuntu4) ... 141s Processing triggers for man-db (2.12.1-3) ... 141s Processing triggers for libc-bin (2.40-1ubuntu3) ... 146s (Reading database ... 81747 files and directories currently installed.) 146s Removing autopkgtest-satdep (0) ... 147s autopkgtest [10:34:20]: test run-unit-test: [----------------------- 147s Testing with python3.13 in /tmp/autopkgtest.PPeovi/autopkgtest_tmp: 147s ============================= test session starts ============================== 147s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 147s cachedir: .pytest_cache 147s rootdir: /tmp/autopkgtest.PPeovi/autopkgtest_tmp 147s plugins: typeguard-4.4.1 148s collecting ... collected 0 items / 2 errors 148s 148s ==================================== ERRORS ==================================== 148s ______________________ ERROR collecting test_geomedian.py ______________________ 148s ImportError while importing test module '/tmp/autopkgtest.PPeovi/autopkgtest_tmp/test_geomedian.py'. 148s Hint: make sure your test modules/packages have valid Python names. 148s Traceback: 148s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 148s from . import multiarray 148s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 148s from . import overrides 148s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 148s from numpy.core._multiarray_umath import ( 148s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 148s 148s During handling of the above exception, another exception occurred: 148s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 148s from numpy.__config__ import show as show_config 148s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 148s from numpy.core._multiarray_umath import ( 148s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 148s raise ImportError(msg) 148s E ImportError: 148s E 148s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 148s E 148s E Importing the numpy C-extensions failed. This error can happen for 148s E many reasons, often due to issues with your setup or how NumPy was 148s E installed. 148s E 148s E We have compiled some common reasons and troubleshooting tips at: 148s E 148s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 148s E 148s E Please note and check the following: 148s E 148s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 148s E * The NumPy version is: "1.26.4" 148s E 148s E and make sure that they are the versions you expect. 148s E Please carefully study the documentation linked above for further help. 148s E 148s E Original error was: No module named 'numpy.core._multiarray_umath' 148s 148s The above exception was the direct cause of the following exception: 148s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 148s return _bootstrap._gcd_import(name[level:], package, level) 148s test_geomedian.py:5: in 148s import numpy as np 148s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 148s raise ImportError(msg) from e 148s E ImportError: Error importing numpy: you should not try to import numpy from 148s E its source directory; please exit the numpy source tree, and relaunch 148s E your python interpreter from there. 148s _______________________ ERROR collecting test_medoid.py ________________________ 148s ImportError while importing test module '/tmp/autopkgtest.PPeovi/autopkgtest_tmp/test_medoid.py'. 148s Hint: make sure your test modules/packages have valid Python names. 148s Traceback: 148s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 148s from . import multiarray 148s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 148s from . import overrides 148s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 148s from numpy.core._multiarray_umath import ( 148s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 148s 148s During handling of the above exception, another exception occurred: 148s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 148s from numpy.__config__ import show as show_config 148s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 148s from numpy.core._multiarray_umath import ( 148s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 148s raise ImportError(msg) 148s E ImportError: 148s E 148s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 148s E 148s E Importing the numpy C-extensions failed. This error can happen for 148s E many reasons, often due to issues with your setup or how NumPy was 148s E installed. 148s E 148s E We have compiled some common reasons and troubleshooting tips at: 148s E 148s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 148s E 148s E Please note and check the following: 148s E 148s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 148s E * The NumPy version is: "1.26.4" 148s E 148s E and make sure that they are the versions you expect. 148s E Please carefully study the documentation linked above for further help. 148s E 148s E Original error was: No module named 'numpy.core._multiarray_umath' 148s 148s The above exception was the direct cause of the following exception: 148s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 148s return _bootstrap._gcd_import(name[level:], package, level) 148s test_medoid.py:5: in 148s import numpy as np 148s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 148s raise ImportError(msg) from e 148s E ImportError: Error importing numpy: you should not try to import numpy from 148s E its source directory; please exit the numpy source tree, and relaunch 148s E your python interpreter from there. 148s =========================== short test summary info ============================ 148s ERROR test_geomedian.py 148s ERROR test_medoid.py 148s !!!!!!!!!!!!!!!!!!! Interrupted: 2 errors during collection !!!!!!!!!!!!!!!!!!!! 148s ============================== 2 errors in 0.27s =============================== 148s autopkgtest [10:34:21]: test run-unit-test: -----------------------] 149s autopkgtest [10:34:22]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 149s run-unit-test FAIL non-zero exit status 2 150s autopkgtest [10:34:23]: test autodep8-python3: preparing testbed 352s autopkgtest [10:37:45]: testbed dpkg architecture: arm64 353s autopkgtest [10:37:46]: testbed apt version: 2.9.8 353s autopkgtest [10:37:46]: @@@@@@@@@@@@@@@@@@@@ test bed setup 354s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 354s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 354s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 354s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 354s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 354s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 354s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 354s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 354s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 355s Fetched 1794 kB in 1s (1903 kB/s) 355s Reading package lists... 360s Reading package lists... 360s Building dependency tree... 360s Reading state information... 361s Calculating upgrade... 361s The following NEW packages will be installed: 361s python3.13-gdbm 361s The following packages will be upgraded: 361s libpython3-stdlib python3 python3-gdbm python3-minimal 362s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 362s Need to get 101 kB of archives. 362s After this operation, 141 kB of additional disk space will be used. 362s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 362s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 362s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 362s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 362s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 362s Fetched 101 kB in 0s (294 kB/s) 363s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 363s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 363s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 363s Setting up python3-minimal (3.12.7-1) ... 363s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 363s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 363s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 363s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 363s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 363s Selecting previously unselected package python3.13-gdbm. 363s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 363s Unpacking python3.13-gdbm (3.13.0-2) ... 363s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 363s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 363s Setting up python3.13-gdbm (3.13.0-2) ... 363s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 363s Setting up python3 (3.12.7-1) ... 364s Setting up python3-gdbm:arm64 (3.12.7-1) ... 364s Processing triggers for man-db (2.12.1-3) ... 365s Reading package lists... 365s Building dependency tree... 365s Reading state information... 366s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 366s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 367s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 367s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 367s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 368s Reading package lists... 368s Reading package lists... 368s Building dependency tree... 368s Reading state information... 369s Calculating upgrade... 369s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 369s Reading package lists... 369s Building dependency tree... 369s Reading state information... 370s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 375s Reading package lists... 376s Building dependency tree... 376s Reading state information... 376s Starting pkgProblemResolver with broken count: 0 376s Starting 2 pkgProblemResolver with broken count: 0 376s Done 377s The following additional packages will be installed: 377s libblas3 libgfortran5 liblapack3 libpython3.13-minimal libpython3.13-stdlib 377s python3-all python3-hdmedians python3-numpy python3.13 python3.13-minimal 377s Suggested packages: 377s gcc gfortran python-numpy-doc python3-dev python3-pytest python3.13-venv 377s python3.13-doc binfmt-support 377s The following NEW packages will be installed: 377s autopkgtest-satdep libblas3 libgfortran5 liblapack3 libpython3.13-minimal 377s libpython3.13-stdlib python3-all python3-hdmedians python3-numpy python3.13 377s python3.13-minimal 377s 0 upgraded, 11 newly installed, 0 to remove and 0 not upgraded. 377s Need to get 12.4 MB/12.4 MB of archives. 377s After this operation, 52.0 MB of additional disk space will be used. 377s Get:1 /tmp/autopkgtest.PPeovi/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [716 B] 377s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 378s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 378s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 378s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 378s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 378s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 378s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 378s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 378s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 378s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-hdmedians arm64 0.14.2-5.1build1 [116 kB] 379s Fetched 12.4 MB in 1s (13.0 MB/s) 379s Selecting previously unselected package libpython3.13-minimal:arm64. 379s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 379s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ... 379s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 379s Selecting previously unselected package python3.13-minimal. 379s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_arm64.deb ... 379s Unpacking python3.13-minimal (3.13.0-2) ... 379s Selecting previously unselected package libblas3:arm64. 379s Preparing to unpack .../02-libblas3_3.12.0-3build2_arm64.deb ... 379s Unpacking libblas3:arm64 (3.12.0-3build2) ... 379s Selecting previously unselected package libgfortran5:arm64. 379s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 379s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 379s Selecting previously unselected package liblapack3:arm64. 379s Preparing to unpack .../04-liblapack3_3.12.0-3build2_arm64.deb ... 379s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 379s Selecting previously unselected package libpython3.13-stdlib:arm64. 379s Preparing to unpack .../05-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 379s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 379s Selecting previously unselected package python3.13. 379s Preparing to unpack .../06-python3.13_3.13.0-2_arm64.deb ... 379s Unpacking python3.13 (3.13.0-2) ... 379s Selecting previously unselected package python3-all. 379s Preparing to unpack .../07-python3-all_3.12.7-1_arm64.deb ... 379s Unpacking python3-all (3.12.7-1) ... 379s Selecting previously unselected package python3-numpy. 379s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 379s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 379s Selecting previously unselected package python3-hdmedians. 379s Preparing to unpack .../09-python3-hdmedians_0.14.2-5.1build1_arm64.deb ... 379s Unpacking python3-hdmedians (0.14.2-5.1build1) ... 379s Selecting previously unselected package autopkgtest-satdep. 379s Preparing to unpack .../10-2-autopkgtest-satdep.deb ... 379s Unpacking autopkgtest-satdep (0) ... 379s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 379s Setting up libblas3:arm64 (3.12.0-3build2) ... 379s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 379s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 379s Setting up python3.13-minimal (3.13.0-2) ... 381s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 381s Setting up liblapack3:arm64 (3.12.0-3build2) ... 381s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 381s Setting up python3.13 (3.13.0-2) ... 382s Setting up python3-all (3.12.7-1) ... 382s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 386s Setting up python3-hdmedians (0.14.2-5.1build1) ... 386s Setting up autopkgtest-satdep (0) ... 386s Processing triggers for systemd (256.5-2ubuntu4) ... 386s Processing triggers for man-db (2.12.1-3) ... 386s Processing triggers for libc-bin (2.40-1ubuntu3) ... 390s (Reading database ... 81583 files and directories currently installed.) 390s Removing autopkgtest-satdep (0) ... 391s autopkgtest [10:38:24]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import hdmedians; print(hdmedians)" ; done 391s autopkgtest [10:38:24]: test autodep8-python3: [----------------------- 392s Testing with python3.13: 392s Traceback (most recent call last): 392s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 24, in 392s from . import multiarray 392s File "/usr/lib/python3/dist-packages/numpy/core/multiarray.py", line 10, in 392s from . import overrides 392s File "/usr/lib/python3/dist-packages/numpy/core/overrides.py", line 8, in 392s from numpy.core._multiarray_umath import ( 392s add_docstring, _get_implementing_args, _ArrayFunctionDispatcher) 392s ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 392s 392s During handling of the above exception, another exception occurred: 392s 392s Traceback (most recent call last): 392s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 130, in 392s from numpy.__config__ import show as show_config 392s File "/usr/lib/python3/dist-packages/numpy/__config__.py", line 4, in 392s from numpy.core._multiarray_umath import ( 392s ...<3 lines>... 392s ) 392s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 50, in 392s raise ImportError(msg) 392s ImportError: 392s 392s IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 392s 392s Importing the numpy C-extensions failed. This error can happen for 392s many reasons, often due to issues with your setup or how NumPy was 392s installed. 392s 392s We have compiled some common reasons and troubleshooting tips at: 392s 392s https://numpy.org/devdocs/user/troubleshooting-importerror.html 392s 392s Please note and check the following: 392s 392s * The Python version is: Python3.13 from "/usr/bin/python3.13" 392s * The NumPy version is: "1.26.4" 392s 392s and make sure that they are the versions you expect. 392s Please carefully study the documentation linked above for further help. 392s 392s Original error was: No module named 'numpy.core._multiarray_umath' 392s 392s 392s The above exception was the direct cause of the following exception: 392s 392s Traceback (most recent call last): 392s File "", line 1, in 392s import hdmedians; print(hdmedians) 392s ^^^^^^^^^^^^^^^^ 392s File "/usr/lib/python3/dist-packages/hdmedians/__init__.py", line 5, in 392s from .medoid import medoid, nanmedoid 392s File "/usr/lib/python3/dist-packages/hdmedians/medoid.py", line 6, in 392s import numpy as np 392s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 135, in 392s raise ImportError(msg) from e 392s ImportError: Error importing numpy: you should not try to import numpy from 392s its source directory; please exit the numpy source tree, and relaunch 392s your python interpreter from there. 392s autopkgtest [10:38:25]: test autodep8-python3: -----------------------] 392s autopkgtest [10:38:25]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 392s autodep8-python3 FAIL non-zero exit status 1 393s autopkgtest [10:38:26]: @@@@@@@@@@@@@@@@@@@@ summary 393s run-unit-test FAIL non-zero exit status 2 393s autodep8-python3 FAIL non-zero exit status 1 405s nova [W] Skipping flock in bos03-arm64 405s Creating nova instance adt-plucky-arm64-python-hdmedians-20241113-103153-juju-7f2275-prod-proposed-migration-environment-15-11a02a32-6200-44eb-b4d5-9882c02dc2b9 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)... 405s nova [W] Skipping flock in bos03-arm64 405s Creating nova instance adt-plucky-arm64-python-hdmedians-20241113-103153-juju-7f2275-prod-proposed-migration-environment-15-11a02a32-6200-44eb-b4d5-9882c02dc2b9 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...