0s autopkgtest [10:31:30]: starting date and time: 2024-11-13 10:31:30+0000 0s autopkgtest [10:31:30]: git checkout: 0acbae0a WIP show VirtSubproc stderr in real-time 0s autopkgtest [10:31:30]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.i8_wgpb0/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-gsd --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-27.secgroup --name adt-plucky-arm64-python-gsd-20241113-103130-juju-7f2275-prod-proposed-migration-environment-2-6b5fcf39-74da-4abd-9010-e0616971ec84 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 100s autopkgtest [10:33:10]: testbed dpkg architecture: arm64 101s autopkgtest [10:33:11]: testbed apt version: 2.9.8 101s autopkgtest [10:33:11]: @@@@@@@@@@@@@@@@@@@@ test bed setup 102s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 102s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 102s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 102s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 102s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 102s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 102s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 102s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 102s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 103s Fetched 1794 kB in 1s (1845 kB/s) 103s Reading package lists... 106s Reading package lists... 106s Building dependency tree... 106s Reading state information... 108s Calculating upgrade... 108s The following NEW packages will be installed: 108s python3.13-gdbm 108s The following packages will be upgraded: 108s libpython3-stdlib python3 python3-gdbm python3-minimal 109s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 109s Need to get 101 kB of archives. 109s After this operation, 141 kB of additional disk space will be used. 109s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 109s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 109s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 109s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 109s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 110s Fetched 101 kB in 0s (271 kB/s) 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 110s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 110s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 110s Setting up python3-minimal (3.12.7-1) ... 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 110s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 111s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 111s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 111s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 111s Selecting previously unselected package python3.13-gdbm. 111s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 111s Unpacking python3.13-gdbm (3.13.0-2) ... 111s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 111s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 111s Setting up python3.13-gdbm (3.13.0-2) ... 111s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 111s Setting up python3 (3.12.7-1) ... 112s Setting up python3-gdbm:arm64 (3.12.7-1) ... 112s Processing triggers for man-db (2.12.1-3) ... 113s Reading package lists... 113s Building dependency tree... 113s Reading state information... 114s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 115s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 115s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 115s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 115s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 117s Reading package lists... 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 118s Calculating upgrade... 119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 119s Reading package lists... 120s Building dependency tree... 120s Reading state information... 121s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 124s autopkgtest [10:33:34]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 125s autopkgtest [10:33:35]: @@@@@@@@@@@@@@@@@@@@ apt-source python-gsd 127s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-gsd 3.3.0-1 (dsc) [2495 B] 127s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-gsd 3.3.0-1 (tar) [109 kB] 127s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-gsd 3.3.0-1 (diff) [6116 B] 127s gpgv: Signature made Fri Jul 5 16:27:33 2024 UTC 127s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 127s gpgv: Can't check signature: No public key 127s dpkg-source: warning: cannot verify inline signature for ./python-gsd_3.3.0-1.dsc: no acceptable signature found 128s autopkgtest [10:33:38]: testing package python-gsd version 3.3.0-1 128s autopkgtest [10:33:38]: build not needed 128s autopkgtest [10:33:38]: test command1: preparing testbed 130s Reading package lists... 130s Building dependency tree... 130s Reading state information... 131s Starting pkgProblemResolver with broken count: 0 131s Starting 2 pkgProblemResolver with broken count: 0 131s Done 132s The following additional packages will be installed: 132s libblas3 libgfortran5 liblapack3 libpython3.13-minimal libpython3.13-stdlib 132s python3-all python3-gsd python3-iniconfig python3-numpy python3-packaging 132s python3-pluggy python3-pytest python3.13 python3.13-minimal 132s Suggested packages: 132s python-gsd-doc gcc gfortran python-numpy-doc python3-dev python3.13-venv 132s python3.13-doc binfmt-support 132s The following NEW packages will be installed: 132s autopkgtest-satdep libblas3 libgfortran5 liblapack3 libpython3.13-minimal 132s libpython3.13-stdlib python3-all python3-gsd python3-iniconfig python3-numpy 132s python3-packaging python3-pluggy python3-pytest python3.13 132s python3.13-minimal 132s 0 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. 132s Need to get 12.8 MB/12.8 MB of archives. 132s After this operation, 54.8 MB of additional disk space will be used. 132s Get:1 /tmp/autopkgtest.ekxZTb/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [716 B] 132s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 133s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 133s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 133s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 133s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 133s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 133s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 133s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 133s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 133s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-gsd arm64 3.3.0-1 [200 kB] 133s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 133s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 133s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 133s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 134s Fetched 12.8 MB in 1s (11.7 MB/s) 134s Selecting previously unselected package libpython3.13-minimal:arm64. 134s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 134s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ... 134s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 134s Selecting previously unselected package python3.13-minimal. 134s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_arm64.deb ... 134s Unpacking python3.13-minimal (3.13.0-2) ... 134s Selecting previously unselected package libblas3:arm64. 134s Preparing to unpack .../02-libblas3_3.12.0-3build2_arm64.deb ... 134s Unpacking libblas3:arm64 (3.12.0-3build2) ... 134s Selecting previously unselected package libgfortran5:arm64. 134s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 134s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 134s Selecting previously unselected package liblapack3:arm64. 134s Preparing to unpack .../04-liblapack3_3.12.0-3build2_arm64.deb ... 134s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 134s Selecting previously unselected package libpython3.13-stdlib:arm64. 134s Preparing to unpack .../05-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 134s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 135s Selecting previously unselected package python3.13. 135s Preparing to unpack .../06-python3.13_3.13.0-2_arm64.deb ... 135s Unpacking python3.13 (3.13.0-2) ... 135s Selecting previously unselected package python3-all. 135s Preparing to unpack .../07-python3-all_3.12.7-1_arm64.deb ... 135s Unpacking python3-all (3.12.7-1) ... 135s Selecting previously unselected package python3-numpy. 135s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 135s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 135s Selecting previously unselected package python3-gsd. 135s Preparing to unpack .../09-python3-gsd_3.3.0-1_arm64.deb ... 135s Unpacking python3-gsd (3.3.0-1) ... 135s Selecting previously unselected package python3-iniconfig. 135s Preparing to unpack .../10-python3-iniconfig_1.1.1-2_all.deb ... 135s Unpacking python3-iniconfig (1.1.1-2) ... 135s Selecting previously unselected package python3-packaging. 135s Preparing to unpack .../11-python3-packaging_24.1-1_all.deb ... 135s Unpacking python3-packaging (24.1-1) ... 135s Selecting previously unselected package python3-pluggy. 135s Preparing to unpack .../12-python3-pluggy_1.5.0-1_all.deb ... 135s Unpacking python3-pluggy (1.5.0-1) ... 135s Selecting previously unselected package python3-pytest. 135s Preparing to unpack .../13-python3-pytest_8.3.3-1_all.deb ... 135s Unpacking python3-pytest (8.3.3-1) ... 135s Selecting previously unselected package autopkgtest-satdep. 135s Preparing to unpack .../14-1-autopkgtest-satdep.deb ... 135s Unpacking autopkgtest-satdep (0) ... 135s Setting up python3-iniconfig (1.1.1-2) ... 136s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 136s Setting up libblas3:arm64 (3.12.0-3build2) ... 136s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 136s Setting up python3-packaging (24.1-1) ... 136s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 136s Setting up python3-pluggy (1.5.0-1) ... 136s Setting up python3.13-minimal (3.13.0-2) ... 137s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 137s Setting up liblapack3:arm64 (3.12.0-3build2) ... 137s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 137s Setting up python3.13 (3.13.0-2) ... 139s Setting up python3-pytest (8.3.3-1) ... 139s Setting up python3-all (3.12.7-1) ... 139s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 144s Setting up python3-gsd (3.3.0-1) ... 145s Setting up autopkgtest-satdep (0) ... 145s Processing triggers for systemd (256.5-2ubuntu4) ... 145s Processing triggers for man-db (2.12.1-3) ... 145s Processing triggers for libc-bin (2.40-1ubuntu3) ... 149s (Reading database ... 81763 files and directories currently installed.) 149s Removing autopkgtest-satdep (0) ... 150s autopkgtest [10:34:00]: test command1: for py in `py3versions -s`; do $py -m pytest -v /usr/lib/python3/dist-packages/gsd; done 150s autopkgtest [10:34:00]: test command1: [----------------------- 151s ============================= test session starts ============================== 151s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 151s cachedir: .pytest_cache 151s rootdir: /usr/lib/python3/dist-packages/gsd 151s plugins: typeguard-4.4.1 151s collecting ... collected 0 items / 3 errors 151s 151s ==================================== ERRORS ==================================== 151s _______________________ ERROR collecting test/test_fl.py _______________________ 151s ImportError while importing test module '/usr/lib/python3/dist-packages/gsd/test/test_fl.py'. 151s Hint: make sure your test modules/packages have valid Python names. 151s Traceback: 151s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 151s from . import multiarray 151s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 151s from . import overrides 151s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 151s from numpy.core._multiarray_umath import ( 151s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 151s 151s During handling of the above exception, another exception occurred: 151s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 151s from numpy.__config__ import show as show_config 151s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 151s from numpy.core._multiarray_umath import ( 151s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 151s raise ImportError(msg) 151s E ImportError: 151s E 151s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 151s E 151s E Importing the numpy C-extensions failed. This error can happen for 151s E many reasons, often due to issues with your setup or how NumPy was 151s E installed. 151s E 151s E We have compiled some common reasons and troubleshooting tips at: 151s E 151s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 151s E 151s E Please note and check the following: 151s E 151s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 151s E * The NumPy version is: "1.26.4" 151s E 151s E and make sure that they are the versions you expect. 151s E Please carefully study the documentation linked above for further help. 151s E 151s E Original error was: No module named 'numpy.core._multiarray_umath' 151s 151s The above exception was the direct cause of the following exception: 151s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 151s return _bootstrap._gcd_import(name[level:], package, level) 151s /usr/lib/python3/dist-packages/gsd/test/test_fl.py:13: in 151s import numpy 151s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 151s raise ImportError(msg) from e 151s E ImportError: Error importing numpy: you should not try to import numpy from 151s E its source directory; please exit the numpy source tree, and relaunch 151s E your python interpreter from there. 151s _____________________ ERROR collecting test/test_hoomd.py ______________________ 151s ImportError while importing test module '/usr/lib/python3/dist-packages/gsd/test/test_hoomd.py'. 151s Hint: make sure your test modules/packages have valid Python names. 151s Traceback: 151s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 151s from . import multiarray 151s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 151s from . import overrides 151s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 151s from numpy.core._multiarray_umath import ( 151s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 151s 151s During handling of the above exception, another exception occurred: 151s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 151s from numpy.__config__ import show as show_config 151s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 151s from numpy.core._multiarray_umath import ( 151s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 151s raise ImportError(msg) 151s E ImportError: 151s E 151s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 151s E 151s E Importing the numpy C-extensions failed. This error can happen for 151s E many reasons, often due to issues with your setup or how NumPy was 151s E installed. 151s E 151s E We have compiled some common reasons and troubleshooting tips at: 151s E 151s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 151s E 151s E Please note and check the following: 151s E 151s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 151s E * The NumPy version is: "1.26.4" 151s E 151s E and make sure that they are the versions you expect. 151s E Please carefully study the documentation linked above for further help. 151s E 151s E Original error was: No module named 'numpy.core._multiarray_umath' 151s 151s The above exception was the direct cause of the following exception: 151s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 151s return _bootstrap._gcd_import(name[level:], package, level) 151s /usr/lib/python3/dist-packages/gsd/test/test_hoomd.py:8: in 151s import numpy 151s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 151s raise ImportError(msg) from e 151s E ImportError: Error importing numpy: you should not try to import numpy from 151s E its source directory; please exit the numpy source tree, and relaunch 151s E your python interpreter from there. 151s ___________________ ERROR collecting test/test_largefile.py ____________________ 151s ImportError while importing test module '/usr/lib/python3/dist-packages/gsd/test/test_largefile.py'. 151s Hint: make sure your test modules/packages have valid Python names. 151s Traceback: 151s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 151s from . import multiarray 151s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 151s from . import overrides 151s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 151s from numpy.core._multiarray_umath import ( 151s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 151s 151s During handling of the above exception, another exception occurred: 151s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 151s from numpy.__config__ import show as show_config 151s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 151s from numpy.core._multiarray_umath import ( 151s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 151s raise ImportError(msg) 151s E ImportError: 151s E 151s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 151s E 151s E Importing the numpy C-extensions failed. This error can happen for 151s E many reasons, often due to issues with your setup or how NumPy was 151s E installed. 151s E 151s E We have compiled some common reasons and troubleshooting tips at: 151s E 151s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 151s E 151s E Please note and check the following: 151s E 151s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 151s E * The NumPy version is: "1.26.4" 151s E 151s E and make sure that they are the versions you expect. 151s E Please carefully study the documentation linked above for further help. 151s E 151s E Original error was: No module named 'numpy.core._multiarray_umath' 151s 151s The above exception was the direct cause of the following exception: 151s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 151s return _bootstrap._gcd_import(name[level:], package, level) 151s /usr/lib/python3/dist-packages/gsd/test/test_largefile.py:9: in 151s import numpy 151s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 151s raise ImportError(msg) from e 151s E ImportError: Error importing numpy: you should not try to import numpy from 151s E its source directory; please exit the numpy source tree, and relaunch 151s E your python interpreter from there. 151s =============================== warnings summary =============================== 151s ../../../../usr/lib/python3/dist-packages/_pytest/cacheprovider.py:475 151s /usr/lib/python3/dist-packages/_pytest/cacheprovider.py:475: PytestCacheWarning: could not create cache path /usr/lib/python3/dist-packages/gsd/.pytest_cache/v/cache/nodeids: [Errno 13] Permission denied: '/usr/lib/python3/dist-packages/gsd/pytest-cache-files-5f3fh09w' 151s config.cache.set("cache/nodeids", sorted(self.cached_nodeids)) 151s 151s ../../../../usr/lib/python3/dist-packages/_pytest/cacheprovider.py:429 151s /usr/lib/python3/dist-packages/_pytest/cacheprovider.py:429: PytestCacheWarning: could not create cache path /usr/lib/python3/dist-packages/gsd/.pytest_cache/v/cache/lastfailed: [Errno 13] Permission denied: '/usr/lib/python3/dist-packages/gsd/pytest-cache-files-cg0_d6c3' 151s config.cache.set("cache/lastfailed", self.lastfailed) 151s 151s ../../../../usr/lib/python3/dist-packages/_pytest/stepwise.py:51 151s /usr/lib/python3/dist-packages/_pytest/stepwise.py:51: PytestCacheWarning: could not create cache path /usr/lib/python3/dist-packages/gsd/.pytest_cache/v/cache/stepwise: [Errno 13] Permission denied: '/usr/lib/python3/dist-packages/gsd/pytest-cache-files-2g_zzo6s' 151s session.config.cache.set(STEPWISE_CACHE_DIR, []) 151s 151s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 151s =========================== short test summary info ============================ 151s ERROR ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py 151s ERROR ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py 151s ERROR ../../../../usr/lib/python3/dist-packages/gsd/test/test_largefile.py 151s !!!!!!!!!!!!!!!!!!! Interrupted: 3 errors during collection !!!!!!!!!!!!!!!!!!!! 151s ======================== 3 warnings, 3 errors in 0.57s ========================= 152s autopkgtest [10:34:02]: test command1: -----------------------] 152s command1 FAIL non-zero exit status 2 152s autopkgtest [10:34:02]: test command1: - - - - - - - - - - results - - - - - - - - - - 153s autopkgtest [10:34:03]: @@@@@@@@@@@@@@@@@@@@ summary 153s command1 FAIL non-zero exit status 2 170s virt: nova [W] Skipping flock in bos03-arm64 170s virt: Creating nova instance adt-plucky-arm64-python-gsd-20241113-103130-juju-7f2275-prod-proposed-migration-environment-2-6b5fcf39-74da-4abd-9010-e0616971ec84 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...