0s autopkgtest [10:29:45]: starting date and time: 2024-11-13 10:29:45+0000 0s autopkgtest [10:29:45]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [10:29:45]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.69mjef6p/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-freesasa --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-29.secgroup --name adt-plucky-arm64-python-freesasa-20241113-102945-juju-7f2275-prod-proposed-migration-environment-15-d8b89777-74e5-4a5e-a6f3-358eb54df1f9 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 81s autopkgtest [10:31:06]: testbed dpkg architecture: arm64 82s autopkgtest [10:31:07]: testbed apt version: 2.9.8 82s autopkgtest [10:31:07]: @@@@@@@@@@@@@@@@@@@@ test bed setup 83s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 83s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 83s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 83s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 83s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 83s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 83s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 83s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 83s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 83s Fetched 1794 kB in 1s (2140 kB/s) 84s Reading package lists... 86s Reading package lists... 87s Building dependency tree... 87s Reading state information... 87s Calculating upgrade... 88s The following NEW packages will be installed: 88s python3.13-gdbm 88s The following packages will be upgraded: 88s libpython3-stdlib python3 python3-gdbm python3-minimal 88s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 88s Need to get 101 kB of archives. 88s After this operation, 141 kB of additional disk space will be used. 88s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 88s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 88s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 88s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 88s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 89s Fetched 101 kB in 0s (291 kB/s) 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 89s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 89s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 89s Setting up python3-minimal (3.12.7-1) ... 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 89s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 89s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 89s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 89s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 89s Selecting previously unselected package python3.13-gdbm. 90s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 90s Unpacking python3.13-gdbm (3.13.0-2) ... 90s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 90s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 90s Setting up python3.13-gdbm (3.13.0-2) ... 90s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 90s Setting up python3 (3.12.7-1) ... 90s Setting up python3-gdbm:arm64 (3.12.7-1) ... 90s Processing triggers for man-db (2.12.1-3) ... 91s Reading package lists... 91s Building dependency tree... 91s Reading state information... 92s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 92s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 92s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 92s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 93s Reading package lists... 93s Reading package lists... 94s Building dependency tree... 94s Reading state information... 94s Calculating upgrade... 95s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 95s Reading package lists... 95s Building dependency tree... 95s Reading state information... 96s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 100s autopkgtest [10:31:25]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 100s autopkgtest [10:31:25]: @@@@@@@@@@@@@@@@@@@@ apt-source python-freesasa 103s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-freesasa 2.1.0-3build3 (dsc) [2349 B] 103s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-freesasa 2.1.0-3build3 (tar) [26.7 kB] 103s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-freesasa 2.1.0-3build3 (diff) [6300 B] 103s gpgv: Signature made Wed Apr 10 18:31:42 2024 UTC 103s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 103s gpgv: Can't check signature: No public key 103s dpkg-source: warning: cannot verify inline signature for ./python-freesasa_2.1.0-3build3.dsc: no acceptable signature found 103s autopkgtest [10:31:28]: testing package python-freesasa version 2.1.0-3build3 103s autopkgtest [10:31:28]: build not needed 103s autopkgtest [10:31:28]: test upstream-tests: preparing testbed 107s Reading package lists... 108s Building dependency tree... 108s Reading state information... 108s Starting pkgProblemResolver with broken count: 0 108s Starting 2 pkgProblemResolver with broken count: 0 108s Done 109s The following additional packages will be installed: 109s fonts-font-awesome fonts-lato freesasa libjs-jquery libjs-sphinxdoc 109s libjs-underscore libpython3.13-minimal libpython3.13-stdlib 109s python-freesasa-doc python3-all python3-freesasa python3-iniconfig 109s python3-packaging python3-pluggy python3-pytest python3.13 109s python3.13-minimal sphinx-rtd-theme-common 109s Suggested packages: 109s python3.13-venv python3.13-doc binfmt-support 109s Recommended packages: 109s javascript-common 109s The following NEW packages will be installed: 109s autopkgtest-satdep fonts-font-awesome fonts-lato freesasa libjs-jquery 109s libjs-sphinxdoc libjs-underscore libpython3.13-minimal libpython3.13-stdlib 109s python-freesasa-doc python3-all python3-freesasa python3-iniconfig 109s python3-packaging python3-pluggy python3-pytest python3.13 109s python3.13-minimal sphinx-rtd-theme-common 109s 0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded. 109s Need to get 12.0 MB/12.0 MB of archives. 109s After this operation, 46.3 MB of additional disk space will be used. 109s Get:1 /tmp/autopkgtest.jlZdI5/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [740 B] 109s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-lato all 2.015-1 [2781 kB] 109s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 109s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 110s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 110s Get:6 http://ftpmaster.internal/ubuntu plucky/universe arm64 freesasa arm64 2.1.2-4 [835 kB] 110s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 110s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 110s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-sphinxdoc all 7.4.7-4 [158 kB] 110s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 110s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1012 kB] 110s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 python-freesasa-doc all 2.1.0-3build3 [30.1 kB] 110s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 110s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 110s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-freesasa arm64 2.1.0-3build3 [152 kB] 110s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 110s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 110s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 110s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 110s Fetched 12.0 MB in 1s (9704 kB/s) 110s Selecting previously unselected package fonts-lato. 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 110s Preparing to unpack .../00-fonts-lato_2.015-1_all.deb ... 110s Unpacking fonts-lato (2.015-1) ... 111s Selecting previously unselected package libpython3.13-minimal:arm64. 111s Preparing to unpack .../01-libpython3.13-minimal_3.13.0-2_arm64.deb ... 111s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 111s Selecting previously unselected package python3.13-minimal. 111s Preparing to unpack .../02-python3.13-minimal_3.13.0-2_arm64.deb ... 111s Unpacking python3.13-minimal (3.13.0-2) ... 111s Selecting previously unselected package fonts-font-awesome. 111s Preparing to unpack .../03-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 111s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 111s Selecting previously unselected package freesasa. 111s Preparing to unpack .../04-freesasa_2.1.2-4_arm64.deb ... 111s Unpacking freesasa (2.1.2-4) ... 111s Selecting previously unselected package libjs-jquery. 111s Preparing to unpack .../05-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 111s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 111s Selecting previously unselected package libjs-underscore. 111s Preparing to unpack .../06-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 111s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 111s Selecting previously unselected package libjs-sphinxdoc. 111s Preparing to unpack .../07-libjs-sphinxdoc_7.4.7-4_all.deb ... 111s Unpacking libjs-sphinxdoc (7.4.7-4) ... 111s Selecting previously unselected package libpython3.13-stdlib:arm64. 111s Preparing to unpack .../08-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 111s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 111s Selecting previously unselected package sphinx-rtd-theme-common. 111s Preparing to unpack .../09-sphinx-rtd-theme-common_3.0.1+dfsg-1_all.deb ... 111s Unpacking sphinx-rtd-theme-common (3.0.1+dfsg-1) ... 111s Selecting previously unselected package python-freesasa-doc. 111s Preparing to unpack .../10-python-freesasa-doc_2.1.0-3build3_all.deb ... 111s Unpacking python-freesasa-doc (2.1.0-3build3) ... 111s Selecting previously unselected package python3.13. 111s Preparing to unpack .../11-python3.13_3.13.0-2_arm64.deb ... 111s Unpacking python3.13 (3.13.0-2) ... 111s Selecting previously unselected package python3-all. 111s Preparing to unpack .../12-python3-all_3.12.7-1_arm64.deb ... 111s Unpacking python3-all (3.12.7-1) ... 111s Selecting previously unselected package python3-freesasa. 111s Preparing to unpack .../13-python3-freesasa_2.1.0-3build3_arm64.deb ... 111s Unpacking python3-freesasa (2.1.0-3build3) ... 111s Selecting previously unselected package python3-iniconfig. 111s Preparing to unpack .../14-python3-iniconfig_1.1.1-2_all.deb ... 111s Unpacking python3-iniconfig (1.1.1-2) ... 111s Selecting previously unselected package python3-packaging. 111s Preparing to unpack .../15-python3-packaging_24.1-1_all.deb ... 111s Unpacking python3-packaging (24.1-1) ... 111s Selecting previously unselected package python3-pluggy. 111s Preparing to unpack .../16-python3-pluggy_1.5.0-1_all.deb ... 111s Unpacking python3-pluggy (1.5.0-1) ... 111s Selecting previously unselected package python3-pytest. 111s Preparing to unpack .../17-python3-pytest_8.3.3-1_all.deb ... 111s Unpacking python3-pytest (8.3.3-1) ... 111s Selecting previously unselected package autopkgtest-satdep. 111s Preparing to unpack .../18-1-autopkgtest-satdep.deb ... 111s Unpacking autopkgtest-satdep (0) ... 112s Setting up python3-iniconfig (1.1.1-2) ... 112s Setting up fonts-lato (2.015-1) ... 112s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 112s Setting up python3-freesasa (2.1.0-3build3) ... 112s Setting up freesasa (2.1.2-4) ... 112s Setting up python3-packaging (24.1-1) ... 112s Setting up python3-pluggy (1.5.0-1) ... 112s Setting up python3.13-minimal (3.13.0-2) ... 113s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 113s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 113s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 113s Setting up sphinx-rtd-theme-common (3.0.1+dfsg-1) ... 113s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 113s Setting up python3.13 (3.13.0-2) ... 114s Setting up python3-pytest (8.3.3-1) ... 115s Setting up python3-all (3.12.7-1) ... 115s Setting up libjs-sphinxdoc (7.4.7-4) ... 115s Setting up python-freesasa-doc (2.1.0-3build3) ... 115s Setting up autopkgtest-satdep (0) ... 115s Processing triggers for man-db (2.12.1-3) ... 115s Processing triggers for systemd (256.5-2ubuntu4) ... 119s (Reading database ... 81068 files and directories currently installed.) 119s Removing autopkgtest-satdep (0) ... 120s autopkgtest [10:31:45]: test upstream-tests: [----------------------- 120s 'test.py' -> '/tmp/autopkgtest.jlZdI5/autopkgtest_tmp/test.py' 120s Running tests with python3.13: 121s ============================= test session starts ============================== 121s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 121s rootdir: /tmp/autopkgtest.jlZdI5/autopkgtest_tmp 121s plugins: typeguard-4.4.1 121s collected 0 items / 1 error 121s 121s ==================================== ERRORS ==================================== 121s ___________________________ ERROR collecting test.py ___________________________ 121s ImportError while importing test module '/tmp/autopkgtest.jlZdI5/autopkgtest_tmp/test.py'. 121s Hint: make sure your test modules/packages have valid Python names. 121s Traceback: 121s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 121s return _bootstrap._gcd_import(name[level:], package, level) 121s test.py:1: in 121s from freesasa import * 121s E ModuleNotFoundError: No module named 'freesasa' 121s =========================== short test summary info ============================ 121s ERROR test.py 121s !!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!! 121s =============================== 1 error in 0.14s =============================== 121s autopkgtest [10:31:46]: test upstream-tests: -----------------------] 122s upstream-tests FAIL non-zero exit status 2 122s autopkgtest [10:31:47]: test upstream-tests: - - - - - - - - - - results - - - - - - - - - - 123s autopkgtest [10:31:48]: @@@@@@@@@@@@@@@@@@@@ summary 123s upstream-tests FAIL non-zero exit status 2 143s nova [W] Skipping flock in bos03-arm64 143s Creating nova instance adt-plucky-arm64-python-freesasa-20241113-102945-juju-7f2275-prod-proposed-migration-environment-15-d8b89777-74e5-4a5e-a6f3-358eb54df1f9 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...