0s autopkgtest [16:32:04]: starting date and time: 2024-11-14 16:32:04+0000 0s autopkgtest [16:32:04]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [16:32:04]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.qw9rs4ox/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy --apt-upgrade python-fisx --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=numpy/1:1.26.4+ds-11ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-27.secgroup --name adt-plucky-arm64-python-fisx-20241114-163204-juju-7f2275-prod-proposed-migration-environment-15-2302b29b-b2cc-48cf-92b1-3bf2d5a8e7cc --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 70s autopkgtest [16:33:14]: testbed dpkg architecture: arm64 70s autopkgtest [16:33:14]: testbed apt version: 2.9.8 70s autopkgtest [16:33:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 71s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 71s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.6 kB] 72s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [951 kB] 72s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [105 kB] 72s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 72s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [136 kB] 72s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 72s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [711 kB] 72s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [5488 B] 72s Fetched 2054 kB in 1s (2251 kB/s) 72s Reading package lists... 75s Reading package lists... 75s Building dependency tree... 75s Reading state information... 76s Calculating upgrade... 76s The following packages will be upgraded: 76s libcap-ng0 pastebinit python3-systemd 77s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 77s Need to get 76.6 kB of archives. 77s After this operation, 349 kB of additional disk space will be used. 77s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libcap-ng0 arm64 0.8.5-3build1 [15.0 kB] 77s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 pastebinit all 1.7.1-1 [14.9 kB] 77s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-systemd arm64 235-1build5 [46.7 kB] 78s Fetched 76.6 kB in 0s (219 kB/s) 78s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79925 files and directories currently installed.) 78s Preparing to unpack .../libcap-ng0_0.8.5-3build1_arm64.deb ... 78s Unpacking libcap-ng0:arm64 (0.8.5-3build1) over (0.8.5-1) ... 78s Setting up libcap-ng0:arm64 (0.8.5-3build1) ... 78s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79925 files and directories currently installed.) 78s Preparing to unpack .../pastebinit_1.7.1-1_all.deb ... 78s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ... 78s Preparing to unpack .../python3-systemd_235-1build5_arm64.deb ... 78s Unpacking python3-systemd (235-1build5) over (235-1build4) ... 78s Setting up pastebinit (1.7.1-1) ... 78s Setting up python3-systemd (235-1build5) ... 78s Processing triggers for man-db (2.12.1-3) ... 79s Processing triggers for libc-bin (2.40-1ubuntu3) ... 79s Reading package lists... 79s Building dependency tree... 79s Reading state information... 80s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 80s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 81s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 81s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 81s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 82s Reading package lists... 82s Reading package lists... 82s Building dependency tree... 82s Reading state information... 83s Calculating upgrade... 83s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 83s Reading package lists... 84s Building dependency tree... 84s Reading state information... 84s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 87s autopkgtest [16:33:31]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 87s autopkgtest [16:33:31]: @@@@@@@@@@@@@@@@@@@@ apt-source python-fisx 90s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-fisx 1.3.1-1build2 (dsc) [2307 B] 90s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-fisx 1.3.1-1build2 (tar) [5736 kB] 90s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-fisx 1.3.1-1build2 (diff) [4728 B] 90s gpgv: Signature made Wed Apr 10 18:31:11 2024 UTC 90s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 90s gpgv: Can't check signature: No public key 90s dpkg-source: warning: cannot verify inline signature for ./python-fisx_1.3.1-1build2.dsc: no acceptable signature found 91s autopkgtest [16:33:35]: testing package python-fisx version 1.3.1-1build2 91s autopkgtest [16:33:35]: build not needed 92s autopkgtest [16:33:36]: test command1: preparing testbed 95s Reading package lists... 95s Building dependency tree... 95s Reading state information... 96s Starting pkgProblemResolver with broken count: 0 96s Starting 2 pkgProblemResolver with broken count: 0 96s Done 97s The following additional packages will be installed: 97s libblas3 libgfortran5 liblapack3 python-fisx-common python3-all python3-fisx 97s python3-numpy 97s Suggested packages: 97s gcc gfortran python-numpy-doc python3-dev python3-pytest 97s The following NEW packages will be installed: 97s autopkgtest-satdep libblas3 libgfortran5 liblapack3 python-fisx-common 97s python3-all python3-fisx python3-numpy 97s 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. 97s Need to get 14.4 MB/14.4 MB of archives. 97s After this operation, 75.2 MB of additional disk space will be used. 97s Get:1 /tmp/autopkgtest.pAWEIm/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [712 B] 97s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 97s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 97s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 98s Get:5 http://ftpmaster.internal/ubuntu plucky/universe arm64 python-fisx-common all 1.3.1-1build2 [3463 kB] 98s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all arm64 3.12.6-0ubuntu1 [886 B] 98s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-numpy arm64 1:1.26.4+ds-11ubuntu1 [4149 kB] 98s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fisx arm64 1.3.1-1build2 [3858 kB] 98s Fetched 14.4 MB in 1s (15.1 MB/s) 98s Selecting previously unselected package libblas3:arm64. 98s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79930 files and directories currently installed.) 98s Preparing to unpack .../0-libblas3_3.12.0-3build2_arm64.deb ... 98s Unpacking libblas3:arm64 (3.12.0-3build2) ... 98s Selecting previously unselected package libgfortran5:arm64. 98s Preparing to unpack .../1-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 98s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 98s Selecting previously unselected package liblapack3:arm64. 99s Preparing to unpack .../2-liblapack3_3.12.0-3build2_arm64.deb ... 99s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 99s Selecting previously unselected package python-fisx-common. 99s Preparing to unpack .../3-python-fisx-common_1.3.1-1build2_all.deb ... 99s Unpacking python-fisx-common (1.3.1-1build2) ... 99s Selecting previously unselected package python3-all. 99s Preparing to unpack .../4-python3-all_3.12.6-0ubuntu1_arm64.deb ... 99s Unpacking python3-all (3.12.6-0ubuntu1) ... 99s Selecting previously unselected package python3-numpy. 99s Preparing to unpack .../5-python3-numpy_1%3a1.26.4+ds-11ubuntu1_arm64.deb ... 99s Unpacking python3-numpy (1:1.26.4+ds-11ubuntu1) ... 99s Selecting previously unselected package python3-fisx. 99s Preparing to unpack .../6-python3-fisx_1.3.1-1build2_arm64.deb ... 99s Unpacking python3-fisx (1.3.1-1build2) ... 99s Selecting previously unselected package autopkgtest-satdep. 99s Preparing to unpack .../7-1-autopkgtest-satdep.deb ... 99s Unpacking autopkgtest-satdep (0) ... 99s Setting up python3-all (3.12.6-0ubuntu1) ... 99s Setting up python-fisx-common (1.3.1-1build2) ... 99s Setting up libblas3:arm64 (3.12.0-3build2) ... 99s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 99s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 99s Setting up liblapack3:arm64 (3.12.0-3build2) ... 99s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 99s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ... 101s Setting up python3-fisx (1.3.1-1build2) ... 102s Setting up autopkgtest-satdep (0) ... 102s Processing triggers for man-db (2.12.1-3) ... 102s Processing triggers for libc-bin (2.40-1ubuntu3) ... 105s (Reading database ... 80927 files and directories currently installed.) 105s Removing autopkgtest-satdep (0) ... 106s autopkgtest [16:33:50]: test command1: set -efu ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -m fisx.tests.testAll 2>&1 ; done 106s autopkgtest [16:33:50]: test command1: [----------------------- 106s Testing with python3.12: 107s :128: RuntimeWarning: 'fisx.tests.testAll' found in sys.modules after import of package 'fisx.tests', but prior to execution of 'fisx.tests.testAll'; this may result in unpredictable behaviour 107s testDetectorImport (testDetector.testDetector.testDetectorImport) ... ok 107s testDetectorInstantiation (testDetector.testDetector.testDetectorInstantiation) ... ok 109s testDetectorResults (testDetector.testDetector.testDetectorResults) ... ok 110s testElementsDefaults (testElements.testElements.testElementsDefaults) ... ok 110s testElementsImport (testElements.testElements.testElementsImport) ... ok 111s testElementsInstantiation (testElements.testElements.testElementsInstantiation) ... ok 113s testElementsResults (testElements.testElements.testElementsResults) ... ok 113s testSimpleSpecfileImport (testSimpleSpecfile.testSimpleSpecfile.testSimpleSpecfileImport) ... ok 113s testSimpleSpecfileReading (testSimpleSpecfile.testSimpleSpecfile.testSimpleSpecfileReading) ... ok 113s testSimpleSpecfileReadingCompatibleWithUserLocale (testSimpleSpecfile.testSimpleSpecfile.testSimpleSpecfileReadingCompatibleWithUserLocale) ... ok 113s testSimpleSpecfileReadingWithCRLF (testSimpleSpecfile.testSimpleSpecfile.testSimpleSpecfileReadingWithCRLF) ... ok 113s testXRFImport (testXRF.testXRF.testXRFImport) ... ok 113s testXRFInstantiation (testXRF.testXRF.testXRFInstantiation) ... ok 116s testXRFResults (testXRF.testXRF.testXRFResults) ... ok 116s testTransmissionTableDefaults (testTransmissionTable.testTransmissionTable.testTransmissionTableDefaults) ... ok 116s testTransmissionTableImport (testTransmissionTable.testTransmissionTable.testTransmissionTableImport) ... ok 116s testTransmissionTableInstantiation (testTransmissionTable.testTransmissionTable.testTransmissionTableInstantiation) ... ok 116s testTransmissionTableResults (testTransmissionTable.testTransmissionTable.testTransmissionTableResults) ... ok 116s testEPDL97Import (testEPDL97.testEPDL97.testEPDL97Import) ... ok 116s testDataDirectoryPresence (testDataDir.testDataDir.testDataDirectoryPresence) ... ok 116s testDataFilePresence (testDataDir.testDataDir.testDataFilePresence) ... ok 116s testDocDirectoryPresence (testDataDir.testDataDir.testDocDirectoryPresence) ... ok 116s 116s ---------------------------------------------------------------------- 116s Ran 22 tests in 9.465s 116s 116s OK 116s 116s Element Peak Energy Rate Secondary Tertiary 116s Cr K KL2 5.4055 5.27e-06 1.621 1.6565 116s Cr K KL2 Si_KL2esc 3.6661 8.1e-09 1.621 1.6565 116s Cr K KL2 Si_KL3esc 3.6655 1.61e-08 1.621 1.6565 116s Cr K KL2 Si_KM2esc 3.5696 2.49e-10 1.621 1.6565 116s Cr K KL2 Si_KM3esc 3.5696 4.97e-10 1.621 1.6565 116s Cr K KL3 5.4147 1.04e-05 1.6214 1.6569 116s Cr K KL3 Si_KL2esc 3.6753 1.59e-08 1.6214 1.6569 116s Cr K KL3 Si_KL3esc 3.6747 3.16e-08 1.6214 1.6569 116s Cr K KL3 Si_KM2esc 3.5788 4.89e-10 1.6214 1.6569 116s Cr K KL3 Si_KM3esc 3.5788 9.78e-10 1.6214 1.6569 116s Cr K KM2 5.9467 8.59e-07 1.6415 1.6782 116s Cr K KM2 Si_KL2esc 4.2073 1.07e-09 1.6415 1.6782 116s Cr K KM2 Si_KL3esc 4.2067 2.13e-09 1.6415 1.6782 116s Cr K KM2 Si_KM2esc 4.1108 3.32e-11 1.6415 1.6782 116s Cr K KM2 Si_KM3esc 4.1108 6.63e-11 1.6415 1.6782 116s Cr K KM3 5.9467 1.7e-06 1.6415 1.6782 116s Cr K KM3 Si_KL2esc 4.2073 2.13e-09 1.6415 1.6782 116s Cr K KM3 Si_KL3esc 4.2067 4.23e-09 1.6415 1.6782 116s Cr K KM3 Si_KM2esc 4.1108 6.57e-11 1.6415 1.6782 116s Cr K KM3 Si_KM3esc 4.1108 1.31e-10 1.6415 1.6782 116s Fe K KL2 6.3909 1.69e-05 1.0642 1.0642 116s Fe K KL2 Si_KL2esc 4.6515 1.79e-08 1.0642 1.0642 116s Fe K KL2 Si_KL3esc 4.6509 3.55e-08 1.0642 1.0642 116s Fe K KL2 Si_KM2esc 4.5550 5.55e-10 1.0642 1.0642 116s Fe K KL2 Si_KM3esc 4.5550 1.11e-09 1.0642 1.0642 116s Fe K KL3 6.4039 3.33e-05 1.0643 1.0643 116s Fe K KL3 Si_KL2esc 4.6645 3.5e-08 1.0643 1.0643 116s Fe K KL3 Si_KL3esc 4.6639 6.96e-08 1.0643 1.0643 116s Fe K KL3 Si_KM2esc 4.5680 1.09e-09 1.0643 1.0643 116s Fe K KL3 Si_KM3esc 4.5680 2.17e-09 1.0643 1.0643 116s Fe K KM2 7.0580 2.74e-06 1.0657 1.0657 116s Fe K KM2 Si_KL2esc 5.3186 2.28e-09 1.0657 1.0657 116s Fe K KM2 Si_KL3esc 5.3180 4.52e-09 1.0657 1.0657 116s Fe K KM2 Si_KM2esc 5.2221 7.11e-11 1.0657 1.0657 116s Fe K KM2 Si_KM3esc 5.2221 1.42e-10 1.0657 1.0657 116s Fe K KM3 7.0580 5.4e-06 1.0657 1.0657 116s Fe K KM3 Si_KL2esc 5.3186 4.48e-09 1.0657 1.0657 116s Fe K KM3 Si_KL3esc 5.3180 8.91e-09 1.0657 1.0657 116s Fe K KM3 Si_KM2esc 5.2221 1.4e-10 1.0657 1.0657 116s Fe K KM3 Si_KM3esc 5.2221 2.8e-10 1.0657 1.0657 116s Ni K KL2 7.4609 2.6e-06 1.0071 1.0071 116s Ni K KL2 Si_KL2esc 5.7215 1.88e-09 1.0071 1.0071 116s Ni K KL2 Si_KL3esc 5.7209 3.73e-09 1.0071 1.0071 116s Ni K KL2 Si_KM2esc 5.6250 5.88e-11 1.0071 1.0071 116s Ni K KL2 Si_KM3esc 5.6250 1.18e-10 1.0071 1.0071 116s Ni K KL3 7.4781 5.1e-06 1.0071 1.0071 116s Ni K KL3 Si_KL2esc 5.7387 3.67e-09 1.0071 1.0071 116s Ni K KL3 Si_KL3esc 5.7381 7.29e-09 1.0071 1.0071 116s Ni K KL3 Si_KM2esc 5.6422 1.15e-10 1.0071 1.0071 116s Ni K KL3 Si_KM3esc 5.6422 2.3e-10 1.0071 1.0071 116s Ni K KM2 8.2647 4.44e-07 1.0074 1.0074 116s Ni K KM2 Si_KL2esc 6.5253 2.46e-10 1.0074 1.0074 116s Ni K KM2 Si_KL3esc 6.5247 4.9e-10 1.0074 1.0074 116s Ni K KM2 Si_KM2esc 6.4288 7.75e-12 1.0074 1.0074 116s Ni K KM2 Si_KM3esc 6.4288 1.55e-11 1.0074 1.0074 116s Ni K KM3 8.2647 8.71e-07 1.0074 1.0074 116s Ni K KM3 Si_KL2esc 6.5253 4.83e-10 1.0074 1.0074 116s Ni K KM3 Si_KL3esc 6.5247 9.61e-10 1.0074 1.0074 116s Ni K KM3 Si_KM2esc 6.4288 1.52e-11 1.0074 1.0074 116s Ni K KM3 Si_KM3esc 6.4288 3.04e-11 1.0074 1.0074 116s Test suite was successful 116s autopkgtest [16:34:00]: test command1: -----------------------] 117s command1 PASS 117s autopkgtest [16:34:01]: test command1: - - - - - - - - - - results - - - - - - - - - - 117s autopkgtest [16:34:01]: @@@@@@@@@@@@@@@@@@@@ summary 117s command1 PASS 130s nova [W] Skipping flock in bos03-arm64 130s Creating nova instance adt-plucky-arm64-python-fisx-20241114-163204-juju-7f2275-prod-proposed-migration-environment-15-2302b29b-b2cc-48cf-92b1-3bf2d5a8e7cc from image adt/ubuntu-plucky-arm64-server-20241114.img (UUID 4472f5f7-859f-4441-9e8e-9550fb35f210)...