0s autopkgtest [02:40:19]: starting date and time: 2024-11-15 02:40:19+0000 0s autopkgtest [02:40:19]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [02:40:19]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.pfojd20b/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:matplotlib --apt-upgrade python-fabio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=matplotlib/3.8.3-3ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-21.secgroup --name adt-plucky-arm64-python-fabio-20241115-024018-juju-7f2275-prod-proposed-migration-environment-15-f63ec36b-801e-43cf-9045-99b743eb381e --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 69s autopkgtest [02:41:28]: testbed dpkg architecture: arm64 69s autopkgtest [02:41:28]: testbed apt version: 2.9.8 69s autopkgtest [02:41:28]: @@@@@@@@@@@@@@@@@@@@ test bed setup 70s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 71s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 71s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1030 kB] 71s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 71s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 71s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [164 kB] 71s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 71s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [773 kB] 71s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [6116 B] 71s Fetched 2221 kB in 1s (2222 kB/s) 71s Reading package lists... 74s Reading package lists... 75s Building dependency tree... 75s Reading state information... 76s Calculating upgrade... 77s The following packages will be upgraded: 77s firmware-sof-signed libcap-ng0 libexpat1 lxd-installer man-db pastebinit 77s python3-systemd xfsprogs 77s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 77s Need to get 9481 kB of archives. 77s After this operation, 549 kB of additional disk space will be used. 77s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 firmware-sof-signed all 2024.06-1ubuntu2 [7083 kB] 78s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libcap-ng0 arm64 0.8.5-3build1 [15.0 kB] 78s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libexpat1 arm64 2.6.4-1 [76.6 kB] 78s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 man-db arm64 2.13.0-1 [1320 kB] 78s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 lxd-installer all 9 [5084 B] 78s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 pastebinit all 1.7.1-1 [14.9 kB] 78s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-systemd arm64 235-1build5 [46.7 kB] 78s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 xfsprogs arm64 6.8.0-2.2ubuntu2 [919 kB] 79s Preconfiguring packages ... 79s Fetched 9481 kB in 1s (10.6 MB/s) 79s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79925 files and directories currently installed.) 79s Preparing to unpack .../firmware-sof-signed_2024.06-1ubuntu2_all.deb ... 79s Unpacking firmware-sof-signed (2024.06-1ubuntu2) over (2024.06-1ubuntu1) ... 79s Preparing to unpack .../libcap-ng0_0.8.5-3build1_arm64.deb ... 79s Unpacking libcap-ng0:arm64 (0.8.5-3build1) over (0.8.5-1) ... 79s Setting up libcap-ng0:arm64 (0.8.5-3build1) ... 79s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79951 files and directories currently installed.) 79s Preparing to unpack .../0-libexpat1_2.6.4-1_arm64.deb ... 79s Unpacking libexpat1:arm64 (2.6.4-1) over (2.6.2-2) ... 79s Preparing to unpack .../1-man-db_2.13.0-1_arm64.deb ... 79s Unpacking man-db (2.13.0-1) over (2.12.1-3) ... 80s Preparing to unpack .../2-lxd-installer_9_all.deb ... 80s Unpacking lxd-installer (9) over (8) ... 80s Preparing to unpack .../3-pastebinit_1.7.1-1_all.deb ... 80s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ... 80s Preparing to unpack .../4-python3-systemd_235-1build5_arm64.deb ... 80s Unpacking python3-systemd (235-1build5) over (235-1build4) ... 80s Preparing to unpack .../5-xfsprogs_6.8.0-2.2ubuntu2_arm64.deb ... 80s Unpacking xfsprogs (6.8.0-2.2ubuntu2) over (6.8.0-2.2ubuntu1) ... 80s Setting up libexpat1:arm64 (2.6.4-1) ... 80s Setting up firmware-sof-signed (2024.06-1ubuntu2) ... 80s Setting up pastebinit (1.7.1-1) ... 80s Setting up man-db (2.13.0-1) ... 80s Updating database of manual pages ... 83s man-db.service is a disabled or a static unit not running, not starting it. 83s Setting up xfsprogs (6.8.0-2.2ubuntu2) ... 83s update-initramfs: deferring update (trigger activated) 84s Setting up lxd-installer (9) ... 84s Setting up python3-systemd (235-1build5) ... 84s Processing triggers for libc-bin (2.40-1ubuntu3) ... 85s Processing triggers for initramfs-tools (0.142ubuntu34) ... 85s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 85s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 108s System running in EFI mode, skipping. 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 110s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 111s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 111s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 111s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 111s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 113s Reading package lists... 113s Reading package lists... 113s Building dependency tree... 113s Reading state information... 114s Calculating upgrade... 115s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 115s Reading package lists... 115s Building dependency tree... 115s Reading state information... 116s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 117s autopkgtest [02:42:16]: rebooting testbed after setup commands that affected boot 121s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 143s autopkgtest [02:42:42]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 146s autopkgtest [02:42:45]: @@@@@@@@@@@@@@@@@@@@ apt-source python-fabio 150s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2 (dsc) [3002 B] 150s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2 (tar) [726 kB] 150s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2 (diff) [9092 B] 150s gpgv: Signature made Mon May 20 16:56:00 2024 UTC 150s gpgv: using RSA key 9B03EBB98300DF97C2B123BFCC8C6BDD1403F4CA 150s gpgv: issuer "roehling@debian.org" 150s gpgv: Can't check signature: No public key 150s dpkg-source: warning: cannot verify inline signature for ./python-fabio_2024.4.0-2.dsc: no acceptable signature found 151s autopkgtest [02:42:50]: testing package python-fabio version 2024.4.0-2 151s autopkgtest [02:42:50]: build not needed 152s autopkgtest [02:42:51]: test command1: preparing testbed 153s Reading package lists... 154s Building dependency tree... 154s Reading state information... 154s Starting pkgProblemResolver with broken count: 0 154s Starting 2 pkgProblemResolver with broken count: 0 154s Done 156s The following additional packages will be installed: 156s blt fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 156s fonts-lyx libaec0 libavahi-client3 libavahi-common-data libavahi-common3 156s libblas3 libcups2t64 libdeflate0 libdouble-conversion3 libdrm-amdgpu1 156s libdrm-radeon1 libegl-mesa0 libegl1 libfontconfig1 libgbm1 libgfortran5 156s libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgomp1 156s libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libice6 156s libimagequant0 libinput-bin libinput10 libjbig0 libjpeg-turbo8 libjpeg8 156s libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 liblerc4 156s liblzf1 libmd4c0 libmtdev1t64 libopenjp2-7 libpcre2-16-0 libqhull-r8.0 156s libqt5core5t64 libqt5dbus5t64 libqt5designer5 libqt5gui5t64 libqt5help5 156s libqt5network5t64 libqt5printsupport5t64 libqt5sql5t64 libqt5test5t64 156s libqt5widgets5t64 libqt5xml5t64 libraqm0 libsharpyuv0 libsm6 libsz2 156s libtcl8.6 libtiff6 libtk8.6 libvulkan1 libwacom-common libwacom9 156s libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 156s libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 156s libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 156s libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 156s libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 156s libxfixes3 libxft2 libxkbcommon-x11-0 libxrender1 libxshmfence1 libxslt1.1 156s libxss1 libxxf86vm1 mesa-libgallium python-matplotlib-data python3-all 156s python3-appdirs python3-brotli python3-contourpy python3-cycler 156s python3-dateutil python3-decorator python3-fabio python3-fonttools 156s python3-fs python3-h5py python3-h5py-serial python3-kiwisolver python3-lxml 156s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 156s python3-packaging python3-pil python3-pil.imagetk python3-pyqt5 156s python3-pyqt5.sip python3-scipy python3-six python3-sympy python3-tk 156s python3-tz python3-ufolib2 python3.12-tk tk8.6-blt2.5 unicode-data 156s x11-common 156s Suggested packages: 156s blt-demo cups-common libjs-jquery-ui-docs liblcms2-utils libthai0 156s qgnomeplatform-qt5 qt5-image-formats-plugins tcl8.6 tk8.6 libwacom-bin 156s python-cycler-doc python-fabio-doc python-h5py-doc python-lxml-doc 156s cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 156s inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi 156s python3-gi-cairo python3-gobject python3-sip python3-tornado 156s texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc 156s gfortran python-numpy-doc python3-dev python3-pytest python-pil-doc 156s python-scipy-doc texlive-fonts-extra python-sympy-doc tix python3-tk-dbg 156s python3.13-tk 156s Recommended packages: 156s libgl1-amber-dri javascript-common qttranslations5-l10n libqt5svg5 156s qt5-gtk-platformtheme qtwayland5 libqt5sql5-sqlite | libqt5sql5-mysql 156s | libqt5sql5-odbc | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase 156s mesa-vulkan-drivers | vulkan-icd python3-bs4 python3-cssselect 156s python3-html5lib python3-olefile g++ | c++-compiler isympy-common 156s The following NEW packages will be installed: 156s autopkgtest-satdep blt fontconfig fontconfig-config fonts-dejavu-core 156s fonts-dejavu-mono fonts-lyx libaec0 libavahi-client3 libavahi-common-data 156s libavahi-common3 libblas3 libcups2t64 libdeflate0 libdouble-conversion3 156s libdrm-amdgpu1 libdrm-radeon1 libegl-mesa0 libegl1 libfontconfig1 libgbm1 156s libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 156s libglx0 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 156s libhdf5-hl-100t64 libice6 libimagequant0 libinput-bin libinput10 libjbig0 156s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 156s liblcms2-2 liblerc4 liblzf1 libmd4c0 libmtdev1t64 libopenjp2-7 libpcre2-16-0 156s libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5designer5 libqt5gui5t64 156s libqt5help5 libqt5network5t64 libqt5printsupport5t64 libqt5sql5t64 156s libqt5test5t64 libqt5widgets5t64 libqt5xml5t64 libraqm0 libsharpyuv0 libsm6 156s libsz2 libtcl8.6 libtiff6 libtk8.6 libvulkan1 libwacom-common libwacom9 156s libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 156s libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 156s libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 156s libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 156s libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 156s libxfixes3 libxft2 libxkbcommon-x11-0 libxrender1 libxshmfence1 libxslt1.1 156s libxss1 libxxf86vm1 mesa-libgallium python-matplotlib-data python3-all 156s python3-appdirs python3-brotli python3-contourpy python3-cycler 156s python3-dateutil python3-decorator python3-fabio python3-fonttools 156s python3-fs python3-h5py python3-h5py-serial python3-kiwisolver python3-lxml 156s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 156s python3-packaging python3-pil python3-pil.imagetk python3-pyqt5 156s python3-pyqt5.sip python3-scipy python3-six python3-sympy python3-tk 156s python3-tz python3-ufolib2 python3.12-tk tk8.6-blt2.5 unicode-data 156s x11-common 156s 0 upgraded, 140 newly installed, 0 to remove and 0 not upgraded. 156s Need to get 84.9 MB/84.9 MB of archives. 156s After this operation, 355 MB of additional disk space will be used. 156s Get:1 /tmp/autopkgtest.pKFWMQ/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [728 B] 156s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [987 kB] 157s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 157s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 157s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 157s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 157s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 157s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 157s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 157s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 157s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.15-1 [774 kB] 157s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7build1 [618 kB] 157s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 blt arm64 2.5.3+dfsg-7build1 [4840 B] 157s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 157s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-lyx all 2.4.2.1-1 [171 kB] 157s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 157s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common-data arm64 0.8-13ubuntu6 [29.6 kB] 157s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common3 arm64 0.8-13ubuntu6 [23.3 kB] 157s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-client3 arm64 0.8-13ubuntu6 [27.2 kB] 157s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 157s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libcups2t64 arm64 2.4.10-1ubuntu2 [271 kB] 157s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB] 157s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdouble-conversion3 arm64 3.3.0-1build1 [38.0 kB] 157s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [20.9 kB] 157s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.123-1 [20.8 kB] 157s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB] 157s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB] 157s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB] 157s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.10-2 [8020 B] 157s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B] 157s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B] 157s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B] 157s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B] 157s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB] 157s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B] 157s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB] 157s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB] 157s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB] 157s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 157s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libegl-mesa0 arm64 24.2.3-1ubuntu1 [129 kB] 157s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 157s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.296.0-1 [153 kB] 157s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB] 157s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB] 157s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB] 157s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B] 157s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB] 157s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB] 157s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 157s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.0.1-1 [487 kB] 157s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 157s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB] 157s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB] 157s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 157s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libimagequant0 arm64 2.18.0-1build1 [37.1 kB] 157s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libwacom-common all 2.13.0-1 [98.6 kB] 157s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libwacom9 arm64 2.13.0-1 [25.2 kB] 157s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libinput-bin arm64 1.26.2-1 [22.8 kB] 157s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libmtdev1t64 arm64 1.1.6-1.2 [14.4 kB] 157s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libinput10 arm64 1.26.2-1 [132 kB] 157s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 157s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 157s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 157s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 157s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 157s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 158s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB] 158s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 158s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 158s Get:70 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmd4c0 arm64 0.5.2-2 [42.4 kB] 158s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB] 158s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB] 158s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5core5t64 arm64 5.15.15+dfsg-1ubuntu1 [1997 kB] 158s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5dbus5t64 arm64 5.15.15+dfsg-1ubuntu1 [221 kB] 158s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB] 158s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libegl1 arm64 1.7.0-1build1 [29.5 kB] 158s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB] 158s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB] 158s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5network5t64 arm64 5.15.15+dfsg-1ubuntu1 [735 kB] 158s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 158s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-icccm4 arm64 0.4.2-1 [10.9 kB] 158s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-util1 arm64 0.4.0-1build3 [10.7 kB] 158s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-image0 arm64 0.4.0-2build1 [10.8 kB] 158s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-keysyms1 arm64 0.4.0-1build4 [7984 B] 158s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 158s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render-util0 arm64 0.3.9-1build4 [9648 B] 158s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shape0 arm64 1.17.0-2 [6246 B] 158s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xinerama0 arm64 1.17.0-2 [5590 B] 158s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xinput0 arm64 1.17.0-2 [34.2 kB] 158s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xkb1 arm64 1.17.0-2 [32.5 kB] 158s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libxkbcommon-x11-0 arm64 1.6.0-1build1 [13.6 kB] 158s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5gui5t64 arm64 5.15.15+dfsg-1ubuntu1 [3679 kB] 158s Get:93 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5widgets5t64 arm64 5.15.15+dfsg-1ubuntu1 [2567 kB] 158s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5xml5t64 arm64 5.15.15+dfsg-1ubuntu1 [124 kB] 158s Get:95 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5designer5 arm64 5.15.15-2 [2840 kB] 158s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5sql5t64 arm64 5.15.15+dfsg-1ubuntu1 [123 kB] 158s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5help5 arm64 5.15.15-2 [165 kB] 158s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5printsupport5t64 arm64 5.15.15+dfsg-1ubuntu1 [208 kB] 158s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5test5t64 arm64 5.15.15+dfsg-1ubuntu1 [144 kB] 158s Get:100 http://ftpmaster.internal/ubuntu plucky/main arm64 libraqm0 arm64 0.10.1-1build1 [14.7 kB] 158s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 158s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 158s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 158s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 158s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebpdemux2 arm64 1.4.0-0.1 [12.3 kB] 159s Get:106 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebpmux3 arm64 1.4.0-0.1 [25.1 kB] 159s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 libxslt1.1 arm64 1.1.39-0exp1ubuntu1 [167 kB] 159s Get:108 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python-matplotlib-data all 3.8.3-3ubuntu1 [2928 kB] 159s Get:109 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all arm64 3.12.6-0ubuntu1 [886 B] 159s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB] 159s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-brotli arm64 1.1.0-2build2 [340 kB] 159s Get:112 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 159s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-contourpy arm64 1.3.0-2 [179 kB] 159s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-cycler all 0.12.1-1 [9716 B] 159s Get:115 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-six all 1.16.0-7 [13.1 kB] 159s Get:116 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dateutil all 2.9.0-2 [80.3 kB] 159s Get:117 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 159s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB] 159s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 159s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-mpmath all 1.3.0-1 [425 kB] 159s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sympy all 1.13.3-1 [4228 kB] 159s Get:122 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tz all 2024.1-2 [31.4 kB] 159s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fs all 2.4.16-4 [91.3 kB] 159s Get:124 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lxml arm64 5.3.0-1 [1205 kB] 159s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build4 [26.7 kB] 159s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 unicode-data all 15.1.0-1 [8878 kB] 160s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fonttools arm64 4.46.0-1build2 [1398 kB] 160s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py-serial arm64 3.11.0-5ubuntu1 [1064 kB] 160s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py all 3.11.0-5ubuntu1 [7974 B] 160s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-kiwisolver arm64 1.4.7-2build1 [62.0 kB] 160s Get:131 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu1 [182 kB] 160s Get:132 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-pil arm64 10.4.0-1ubuntu1 [456 kB] 160s Get:133 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-tk arm64 3.12.7-3 [115 kB] 160s Get:134 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tk arm64 3.12.6-1ubuntu1 [9806 B] 160s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pil.imagetk arm64 10.4.0-1ubuntu1 [9504 B] 160s Get:136 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 160s Get:137 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python3-matplotlib arm64 3.8.3-3ubuntu1 [4612 kB] 160s Get:138 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pyqt5.sip arm64 12.15.0-1build1 [73.9 kB] 160s Get:139 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pyqt5 arm64 5.15.11+dfsg-1build1 [2577 kB] 160s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fabio arm64 2024.4.0-2 [610 kB] 161s Fetched 84.9 MB in 4s (21.6 MB/s) 161s Selecting previously unselected package libtcl8.6:arm64. 161s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79957 files and directories currently installed.) 161s Preparing to unpack .../000-libtcl8.6_8.6.15+dfsg-2_arm64.deb ... 161s Unpacking libtcl8.6:arm64 (8.6.15+dfsg-2) ... 161s Selecting previously unselected package fonts-dejavu-mono. 161s Preparing to unpack .../001-fonts-dejavu-mono_2.37-8_all.deb ... 161s Unpacking fonts-dejavu-mono (2.37-8) ... 161s Selecting previously unselected package fonts-dejavu-core. 161s Preparing to unpack .../002-fonts-dejavu-core_2.37-8_all.deb ... 161s Unpacking fonts-dejavu-core (2.37-8) ... 162s Selecting previously unselected package fontconfig-config. 162s Preparing to unpack .../003-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 162s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 162s Selecting previously unselected package libfontconfig1:arm64. 162s Preparing to unpack .../004-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 162s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 162s Selecting previously unselected package libxrender1:arm64. 162s Preparing to unpack .../005-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 162s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 162s Selecting previously unselected package libxft2:arm64. 162s Preparing to unpack .../006-libxft2_2.3.6-1build1_arm64.deb ... 162s Unpacking libxft2:arm64 (2.3.6-1build1) ... 162s Selecting previously unselected package x11-common. 162s Preparing to unpack .../007-x11-common_1%3a7.7+23ubuntu3_all.deb ... 162s Unpacking x11-common (1:7.7+23ubuntu3) ... 162s Selecting previously unselected package libxss1:arm64. 162s Preparing to unpack .../008-libxss1_1%3a1.2.3-1build3_arm64.deb ... 162s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 162s Selecting previously unselected package libtk8.6:arm64. 162s Preparing to unpack .../009-libtk8.6_8.6.15-1_arm64.deb ... 162s Unpacking libtk8.6:arm64 (8.6.15-1) ... 162s Selecting previously unselected package tk8.6-blt2.5. 162s Preparing to unpack .../010-tk8.6-blt2.5_2.5.3+dfsg-7build1_arm64.deb ... 162s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 162s Selecting previously unselected package blt. 162s Preparing to unpack .../011-blt_2.5.3+dfsg-7build1_arm64.deb ... 162s Unpacking blt (2.5.3+dfsg-7build1) ... 162s Selecting previously unselected package fontconfig. 163s Preparing to unpack .../012-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 163s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 163s Selecting previously unselected package fonts-lyx. 163s Preparing to unpack .../013-fonts-lyx_2.4.2.1-1_all.deb ... 163s Unpacking fonts-lyx (2.4.2.1-1) ... 163s Selecting previously unselected package libaec0:arm64. 163s Preparing to unpack .../014-libaec0_1.1.3-1_arm64.deb ... 163s Unpacking libaec0:arm64 (1.1.3-1) ... 163s Selecting previously unselected package libavahi-common-data:arm64. 163s Preparing to unpack .../015-libavahi-common-data_0.8-13ubuntu6_arm64.deb ... 163s Unpacking libavahi-common-data:arm64 (0.8-13ubuntu6) ... 163s Selecting previously unselected package libavahi-common3:arm64. 163s Preparing to unpack .../016-libavahi-common3_0.8-13ubuntu6_arm64.deb ... 163s Unpacking libavahi-common3:arm64 (0.8-13ubuntu6) ... 163s Selecting previously unselected package libavahi-client3:arm64. 163s Preparing to unpack .../017-libavahi-client3_0.8-13ubuntu6_arm64.deb ... 163s Unpacking libavahi-client3:arm64 (0.8-13ubuntu6) ... 163s Selecting previously unselected package libblas3:arm64. 163s Preparing to unpack .../018-libblas3_3.12.0-3build2_arm64.deb ... 163s Unpacking libblas3:arm64 (3.12.0-3build2) ... 163s Selecting previously unselected package libcups2t64:arm64. 163s Preparing to unpack .../019-libcups2t64_2.4.10-1ubuntu2_arm64.deb ... 163s Unpacking libcups2t64:arm64 (2.4.10-1ubuntu2) ... 163s Selecting previously unselected package libdeflate0:arm64. 163s Preparing to unpack .../020-libdeflate0_1.22-1_arm64.deb ... 163s Unpacking libdeflate0:arm64 (1.22-1) ... 163s Selecting previously unselected package libdouble-conversion3:arm64. 163s Preparing to unpack .../021-libdouble-conversion3_3.3.0-1build1_arm64.deb ... 163s Unpacking libdouble-conversion3:arm64 (3.3.0-1build1) ... 163s Selecting previously unselected package libdrm-amdgpu1:arm64. 163s Preparing to unpack .../022-libdrm-amdgpu1_2.4.123-1_arm64.deb ... 163s Unpacking libdrm-amdgpu1:arm64 (2.4.123-1) ... 163s Selecting previously unselected package libdrm-radeon1:arm64. 163s Preparing to unpack .../023-libdrm-radeon1_2.4.123-1_arm64.deb ... 163s Unpacking libdrm-radeon1:arm64 (2.4.123-1) ... 163s Selecting previously unselected package libwayland-server0:arm64. 163s Preparing to unpack .../024-libwayland-server0_1.23.0-1_arm64.deb ... 163s Unpacking libwayland-server0:arm64 (1.23.0-1) ... 163s Selecting previously unselected package libxcb-randr0:arm64. 163s Preparing to unpack .../025-libxcb-randr0_1.17.0-2_arm64.deb ... 163s Unpacking libxcb-randr0:arm64 (1.17.0-2) ... 163s Selecting previously unselected package libglapi-mesa:arm64. 163s Preparing to unpack .../026-libglapi-mesa_24.2.3-1ubuntu1_arm64.deb ... 163s Unpacking libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 163s Selecting previously unselected package libx11-xcb1:arm64. 163s Preparing to unpack .../027-libx11-xcb1_2%3a1.8.10-2_arm64.deb ... 163s Unpacking libx11-xcb1:arm64 (2:1.8.10-2) ... 163s Selecting previously unselected package libxcb-dri2-0:arm64. 163s Preparing to unpack .../028-libxcb-dri2-0_1.17.0-2_arm64.deb ... 163s Unpacking libxcb-dri2-0:arm64 (1.17.0-2) ... 163s Selecting previously unselected package libxcb-dri3-0:arm64. 163s Preparing to unpack .../029-libxcb-dri3-0_1.17.0-2_arm64.deb ... 163s Unpacking libxcb-dri3-0:arm64 (1.17.0-2) ... 164s Selecting previously unselected package libxcb-present0:arm64. 164s Preparing to unpack .../030-libxcb-present0_1.17.0-2_arm64.deb ... 164s Unpacking libxcb-present0:arm64 (1.17.0-2) ... 164s Selecting previously unselected package libxcb-sync1:arm64. 164s Preparing to unpack .../031-libxcb-sync1_1.17.0-2_arm64.deb ... 164s Unpacking libxcb-sync1:arm64 (1.17.0-2) ... 164s Selecting previously unselected package libxcb-xfixes0:arm64. 164s Preparing to unpack .../032-libxcb-xfixes0_1.17.0-2_arm64.deb ... 164s Unpacking libxcb-xfixes0:arm64 (1.17.0-2) ... 164s Selecting previously unselected package libxshmfence1:arm64. 164s Preparing to unpack .../033-libxshmfence1_1.3-1build5_arm64.deb ... 164s Unpacking libxshmfence1:arm64 (1.3-1build5) ... 164s Selecting previously unselected package mesa-libgallium:arm64. 164s Preparing to unpack .../034-mesa-libgallium_24.2.3-1ubuntu1_arm64.deb ... 164s Unpacking mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 164s Selecting previously unselected package libgbm1:arm64. 164s Preparing to unpack .../035-libgbm1_24.2.3-1ubuntu1_arm64.deb ... 164s Unpacking libgbm1:arm64 (24.2.3-1ubuntu1) ... 164s Selecting previously unselected package libwayland-client0:arm64. 164s Preparing to unpack .../036-libwayland-client0_1.23.0-1_arm64.deb ... 164s Unpacking libwayland-client0:arm64 (1.23.0-1) ... 164s Selecting previously unselected package libxcb-shm0:arm64. 164s Preparing to unpack .../037-libxcb-shm0_1.17.0-2_arm64.deb ... 164s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 164s Selecting previously unselected package libegl-mesa0:arm64. 164s Preparing to unpack .../038-libegl-mesa0_24.2.3-1ubuntu1_arm64.deb ... 164s Unpacking libegl-mesa0:arm64 (24.2.3-1ubuntu1) ... 164s Selecting previously unselected package libgfortran5:arm64. 164s Preparing to unpack .../039-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 164s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 164s Selecting previously unselected package libvulkan1:arm64. 164s Preparing to unpack .../040-libvulkan1_1.3.296.0-1_arm64.deb ... 164s Unpacking libvulkan1:arm64 (1.3.296.0-1) ... 164s Selecting previously unselected package libgl1-mesa-dri:arm64. 164s Preparing to unpack .../041-libgl1-mesa-dri_24.2.3-1ubuntu1_arm64.deb ... 165s Unpacking libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 165s Selecting previously unselected package libxcb-glx0:arm64. 165s Preparing to unpack .../042-libxcb-glx0_1.17.0-2_arm64.deb ... 165s Unpacking libxcb-glx0:arm64 (1.17.0-2) ... 165s Selecting previously unselected package libxfixes3:arm64. 165s Preparing to unpack .../043-libxfixes3_1%3a6.0.0-2build1_arm64.deb ... 165s Unpacking libxfixes3:arm64 (1:6.0.0-2build1) ... 165s Selecting previously unselected package libxxf86vm1:arm64. 165s Preparing to unpack .../044-libxxf86vm1_1%3a1.1.4-1build4_arm64.deb ... 165s Unpacking libxxf86vm1:arm64 (1:1.1.4-1build4) ... 165s Selecting previously unselected package libglx-mesa0:arm64. 165s Preparing to unpack .../045-libglx-mesa0_24.2.3-1ubuntu1_arm64.deb ... 165s Unpacking libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 165s Selecting previously unselected package libgomp1:arm64. 165s Preparing to unpack .../046-libgomp1_14.2.0-8ubuntu1_arm64.deb ... 165s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ... 165s Selecting previously unselected package libgraphite2-3:arm64. 165s Preparing to unpack .../047-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 165s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 165s Selecting previously unselected package libharfbuzz0b:arm64. 165s Preparing to unpack .../048-libharfbuzz0b_10.0.1-1_arm64.deb ... 165s Unpacking libharfbuzz0b:arm64 (10.0.1-1) ... 165s Selecting previously unselected package libsz2:arm64. 165s Preparing to unpack .../049-libsz2_1.1.3-1_arm64.deb ... 165s Unpacking libsz2:arm64 (1.1.3-1) ... 165s Selecting previously unselected package libhdf5-103-1t64:arm64. 165s Preparing to unpack .../050-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 165s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 165s Selecting previously unselected package libhdf5-hl-100t64:arm64. 165s Preparing to unpack .../051-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_arm64.deb ... 165s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 165s Selecting previously unselected package libice6:arm64. 165s Preparing to unpack .../052-libice6_2%3a1.1.1-1_arm64.deb ... 165s Unpacking libice6:arm64 (2:1.1.1-1) ... 165s Selecting previously unselected package libimagequant0:arm64. 165s Preparing to unpack .../053-libimagequant0_2.18.0-1build1_arm64.deb ... 165s Unpacking libimagequant0:arm64 (2.18.0-1build1) ... 165s Selecting previously unselected package libwacom-common. 165s Preparing to unpack .../054-libwacom-common_2.13.0-1_all.deb ... 165s Unpacking libwacom-common (2.13.0-1) ... 165s Selecting previously unselected package libwacom9:arm64. 165s Preparing to unpack .../055-libwacom9_2.13.0-1_arm64.deb ... 165s Unpacking libwacom9:arm64 (2.13.0-1) ... 165s Selecting previously unselected package libinput-bin. 165s Preparing to unpack .../056-libinput-bin_1.26.2-1_arm64.deb ... 165s Unpacking libinput-bin (1.26.2-1) ... 166s Selecting previously unselected package libmtdev1t64:arm64. 166s Preparing to unpack .../057-libmtdev1t64_1.1.6-1.2_arm64.deb ... 166s Unpacking libmtdev1t64:arm64 (1.1.6-1.2) ... 166s Selecting previously unselected package libinput10:arm64. 166s Preparing to unpack .../058-libinput10_1.26.2-1_arm64.deb ... 166s Unpacking libinput10:arm64 (1.26.2-1) ... 166s Selecting previously unselected package libjpeg-turbo8:arm64. 166s Preparing to unpack .../059-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 166s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 166s Selecting previously unselected package libjpeg8:arm64. 166s Preparing to unpack .../060-libjpeg8_8c-2ubuntu11_arm64.deb ... 166s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 166s Selecting previously unselected package libjs-jquery. 166s Preparing to unpack .../061-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 166s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 166s Selecting previously unselected package libjs-jquery-ui. 166s Preparing to unpack .../062-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 166s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 166s Selecting previously unselected package liblapack3:arm64. 166s Preparing to unpack .../063-liblapack3_3.12.0-3build2_arm64.deb ... 166s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 166s Selecting previously unselected package liblbfgsb0:arm64. 166s Preparing to unpack .../064-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ... 166s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 166s Selecting previously unselected package liblcms2-2:arm64. 166s Preparing to unpack .../065-liblcms2-2_2.16-2_arm64.deb ... 166s Unpacking liblcms2-2:arm64 (2.16-2) ... 166s Selecting previously unselected package liblerc4:arm64. 166s Preparing to unpack .../066-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 166s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 166s Selecting previously unselected package liblzf1:arm64. 166s Preparing to unpack .../067-liblzf1_3.6-4_arm64.deb ... 166s Unpacking liblzf1:arm64 (3.6-4) ... 166s Selecting previously unselected package libmd4c0:arm64. 166s Preparing to unpack .../068-libmd4c0_0.5.2-2_arm64.deb ... 166s Unpacking libmd4c0:arm64 (0.5.2-2) ... 166s Selecting previously unselected package libpcre2-16-0:arm64. 166s Preparing to unpack .../069-libpcre2-16-0_10.42-4ubuntu3_arm64.deb ... 166s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu3) ... 166s Selecting previously unselected package libqhull-r8.0:arm64. 166s Preparing to unpack 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libxcb-util1:arm64 (0.4.0-1build3) ... 167s Selecting previously unselected package libxcb-image0:arm64. 167s Preparing to unpack .../081-libxcb-image0_0.4.0-2build1_arm64.deb ... 167s Unpacking libxcb-image0:arm64 (0.4.0-2build1) ... 167s Selecting previously unselected package libxcb-keysyms1:arm64. 167s Preparing to unpack .../082-libxcb-keysyms1_0.4.0-1build4_arm64.deb ... 167s Unpacking libxcb-keysyms1:arm64 (0.4.0-1build4) ... 167s Selecting previously unselected package libxcb-render0:arm64. 167s Preparing to unpack .../083-libxcb-render0_1.17.0-2_arm64.deb ... 167s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 167s Selecting previously unselected package libxcb-render-util0:arm64. 167s Preparing to unpack .../084-libxcb-render-util0_0.3.9-1build4_arm64.deb ... 167s Unpacking libxcb-render-util0:arm64 (0.3.9-1build4) ... 167s Selecting previously unselected package libxcb-shape0:arm64. 167s Preparing to unpack .../085-libxcb-shape0_1.17.0-2_arm64.deb ... 167s Unpacking libxcb-shape0:arm64 (1.17.0-2) ... 167s Selecting previously unselected package libxcb-xinerama0:arm64. 167s Preparing to unpack .../086-libxcb-xinerama0_1.17.0-2_arm64.deb ... 167s Unpacking libxcb-xinerama0:arm64 (1.17.0-2) ... 167s Selecting previously unselected package libxcb-xinput0:arm64. 167s Preparing to unpack .../087-libxcb-xinput0_1.17.0-2_arm64.deb ... 167s Unpacking libxcb-xinput0:arm64 (1.17.0-2) ... 167s Selecting previously unselected package libxcb-xkb1:arm64. 168s Preparing to unpack .../088-libxcb-xkb1_1.17.0-2_arm64.deb ... 168s Unpacking libxcb-xkb1:arm64 (1.17.0-2) ... 168s Selecting previously unselected package libxkbcommon-x11-0:arm64. 168s Preparing to unpack .../089-libxkbcommon-x11-0_1.6.0-1build1_arm64.deb ... 168s Unpacking libxkbcommon-x11-0:arm64 (1.6.0-1build1) ... 168s Selecting previously unselected package libqt5gui5t64:arm64. 168s Preparing to unpack .../090-libqt5gui5t64_5.15.15+dfsg-1ubuntu1_arm64.deb ... 168s Unpacking libqt5gui5t64:arm64 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libxslt1.1:arm64 (1.1.39-0exp1ubuntu1) ... 169s Selecting previously unselected package python-matplotlib-data. 169s Preparing to unpack .../106-python-matplotlib-data_3.8.3-3ubuntu1_all.deb ... 169s Unpacking python-matplotlib-data (3.8.3-3ubuntu1) ... 169s Selecting previously unselected package python3-all. 169s Preparing to unpack .../107-python3-all_3.12.6-0ubuntu1_arm64.deb ... 169s Unpacking python3-all (3.12.6-0ubuntu1) ... 169s Selecting previously unselected package python3-appdirs. 169s Preparing to unpack .../108-python3-appdirs_1.4.4-4_all.deb ... 169s Unpacking python3-appdirs (1.4.4-4) ... 169s Selecting previously unselected package python3-brotli. 169s Preparing to unpack .../109-python3-brotli_1.1.0-2build2_arm64.deb ... 169s Unpacking python3-brotli (1.1.0-2build2) ... 169s Selecting previously unselected package python3-numpy. 169s Preparing to unpack .../110-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 169s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 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Unpacking python3-pyqt5 (5.15.11+dfsg-1build1) ... 173s Selecting previously unselected package python3-fabio. 173s Preparing to unpack .../138-python3-fabio_2024.4.0-2_arm64.deb ... 173s Unpacking python3-fabio (2024.4.0-2) ... 173s Selecting previously unselected package autopkgtest-satdep. 173s Preparing to unpack .../139-1-autopkgtest-satdep.deb ... 173s Unpacking autopkgtest-satdep (0) ... 173s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 173s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ... 173s Setting up liblcms2-2:arm64 (2.16-2) ... 173s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 173s Setting up libwayland-server0:arm64 (1.23.0-1) ... 173s Setting up libx11-xcb1:arm64 (2:1.8.10-2) ... 173s Setting up libdouble-conversion3:arm64 (3.3.0-1build1) ... 173s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ... 173s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 173s Setting up libxcb-xinput0:arm64 (1.17.0-2) ... 173s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 173s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 173s Setting up libxcb-render0:arm64 (1.17.0-2) ... 173s Setting up libdrm-radeon1:arm64 (2.4.123-1) ... 173s Setting up libglvnd0:arm64 (1.7.0-1build1) ... 173s Setting up fonts-lyx (2.4.2.1-1) ... 173s Setting up libxcb-glx0:arm64 (1.17.0-2) ... 173s Setting up libxcb-keysyms1:arm64 (0.4.0-1build4) ... 173s Setting up libxcb-shape0:arm64 (1.17.0-2) ... 173s Setting up x11-common (1:7.7+23ubuntu3) ... 174s Setting up libdeflate0:arm64 (1.22-1) ... 174s Setting up libqhull-r8.0:arm64 (2020.2-6build1) ... 174s Setting up libxcb-render-util0:arm64 (0.3.9-1build4) ... 174s Setting up python3-all (3.12.6-0ubuntu1) ... 174s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 174s Setting up libxcb-icccm4:arm64 (0.4.2-1) ... 174s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ... 174s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 174s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu3) ... 174s Setting up libaec0:arm64 (1.1.3-1) ... 174s Setting up python3-tz (2024.1-2) ... 174s Setting up libxcb-util1:arm64 (0.4.0-1build3) ... 174s Setting up libxxf86vm1:arm64 (1:1.1.4-1build4) ... 174s Setting up libxcb-xkb1:arm64 (1.17.0-2) ... 174s Setting up libxcb-image0:arm64 (0.4.0-2build1) ... 174s Setting up libxcb-present0:arm64 (1.17.0-2) ... 174s Setting up unicode-data (15.1.0-1) ... 174s Setting up python3-six (1.16.0-7) ... 174s Setting up libqt5core5t64:arm64 (5.15.15+dfsg-1ubuntu1) ... 174s Setting up python3-decorator (5.1.1-5) ... 174s Setting up libblas3:arm64 (3.12.0-3build2) ... 174s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 174s Setting up python3-packaging (24.1-1) ... 175s Setting up libxcb-xinerama0:arm64 (1.17.0-2) ... 175s Setting up libxfixes3:arm64 (1:6.0.0-2build1) ... 175s Setting up libxcb-sync1:arm64 (1.17.0-2) ... 175s Setting up python3-brotli (1.1.0-2build2) ... 175s Setting up libavahi-common-data:arm64 (0.8-13ubuntu6) ... 175s Setting up liblzf1:arm64 (3.6-4) ... 175s Setting up python3-cycler (0.12.1-1) ... 175s Setting up libimagequant0:arm64 (2.18.0-1build1) ... 175s Setting up libxkbcommon-x11-0:arm64 (1.6.0-1build1) ... 175s Setting up fonts-dejavu-mono (2.37-8) ... 175s Setting up python3-kiwisolver (1.4.7-2build1) ... 175s Setting up libtcl8.6:arm64 (8.6.15+dfsg-2) ... 175s Setting up fonts-dejavu-core (2.37-8) ... 175s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 175s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 175s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 175s Setting up libvulkan1:arm64 (1.3.296.0-1) ... 175s Setting up libwebp7:arm64 (1.4.0-0.1) ... 175s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ... 175s Setting up python3-pyqt5.sip (12.15.0-1build1) ... 175s Setting up libmtdev1t64:arm64 (1.1.6-1.2) ... 175s Setting up libxshmfence1:arm64 (1.3-1build5) ... 175s Setting up libxcb-randr0:arm64 (1.17.0-2) ... 175s Setting up libxslt1.1:arm64 (1.1.39-0exp1ubuntu1) ... 175s Setting up libqt5sql5t64:arm64 (5.15.15+dfsg-1ubuntu1) ... 175s Setting up libmd4c0:arm64 (0.5.2-2) ... 175s Setting up libopenjp2-7:arm64 (2.5.0-2ubuntu1) ... 175s Setting up libharfbuzz0b:arm64 (10.0.1-1) ... 175s Setting up python3-dateutil (2.9.0-2) ... 175s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 175s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 176s Setting up python3-mpmath (1.3.0-1) ... 176s Setting up python-matplotlib-data (3.8.3-3ubuntu1) ... 176s Setting up libwebpmux3:arm64 (1.4.0-0.1) ... 176s Setting up python3-appdirs (1.4.4-4) ... 176s Setting up libsz2:arm64 (1.1.3-1) ... 176s Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ... 176s Setting up libwacom-common (2.13.0-1) ... 176s Setting up libwayland-client0:arm64 (1.23.0-1) ... 176s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 176s Setting up python3-sympy (1.13.3-1) ... 185s Setting up libice6:arm64 (2:1.1.1-1) ... 185s Setting up mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 185s Setting up liblapack3:arm64 (3.12.0-3build2) ... 185s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 185s Setting up libqt5dbus5t64:arm64 (5.15.15+dfsg-1ubuntu1) ... 185s Setting up libgbm1:arm64 (24.2.3-1ubuntu1) ... 185s Setting up libwacom9:arm64 (2.13.0-1) ... 185s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 185s Setting up libwebpdemux2:arm64 (1.4.0-0.1) ... 185s Setting up libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 185s Setting up libqt5network5t64:arm64 (5.15.15+dfsg-1ubuntu1) ... 185s Setting up libavahi-common3:arm64 (0.8-13ubuntu6) ... 185s Setting up libqt5xml5t64:arm64 (5.15.15+dfsg-1ubuntu1) ... 185s Setting up libqt5test5t64:arm64 (5.15.15+dfsg-1ubuntu1) ... 185s Setting up libinput-bin (1.26.2-1) ... 185s Setting up python3-fs (2.4.16-4) ... 186s Setting up libegl-mesa0:arm64 (24.2.3-1ubuntu1) ... 186s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 186s Setting up libraqm0:arm64 (0.10.1-1build1) ... 186s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 188s Setting up python3-lxml:arm64 (5.3.0-1) ... 188s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 188s Setting up libegl1:arm64 (1.7.0-1build1) ... 188s Setting up python3-contourpy (1.3.0-2) ... 188s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 188s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 188s Setting up libsm6:arm64 (2:1.2.4-1) ... 188s Setting up libavahi-client3:arm64 (0.8-13ubuntu6) ... 188s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 188s Setting up libinput10:arm64 (1.26.2-1) ... 188s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 188s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 190s Regenerating fonts cache... done. 190s Setting up libxft2:arm64 (2.3.6-1build1) ... 190s Setting up libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 190s Setting up python3-scipy (1.13.1-5) ... 195s Setting up libglx0:arm64 (1.7.0-1build1) ... 195s Setting up libtk8.6:arm64 (8.6.15-1) ... 195s Setting up python3.12-tk (3.12.7-3) ... 195s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 195s Setting up python3-pil:arm64 (10.4.0-1ubuntu1) ... 196s Setting up libgl1:arm64 (1.7.0-1build1) ... 196s Setting up python3-h5py (3.11.0-5ubuntu1) ... 196s Setting up libcups2t64:arm64 (2.4.10-1ubuntu2) ... 196s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 196s Setting up blt (2.5.3+dfsg-7build1) ... 196s Setting up python3-tk:arm64 (3.12.6-1ubuntu1) ... 196s Setting up libqt5gui5t64:arm64 (5.15.15+dfsg-1ubuntu1) ... 196s Setting up python3-pil.imagetk:arm64 (10.4.0-1ubuntu1) ... 196s Setting up libqt5widgets5t64:arm64 (5.15.15+dfsg-1ubuntu1) ... 196s Setting up libqt5help5:arm64 (5.15.15-2) ... 196s Setting up libqt5printsupport5t64:arm64 (5.15.15+dfsg-1ubuntu1) ... 196s Setting up libqt5designer5:arm64 (5.15.15-2) ... 196s Setting up python3-pyqt5 (5.15.11+dfsg-1build1) ... 197s Setting up python3-fonttools (4.46.0-1build2) ... 197s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... 198s Setting up python3-matplotlib (3.8.3-3ubuntu1) ... 200s Setting up python3-fabio (2024.4.0-2) ... 200s Setting up autopkgtest-satdep (0) ... 200s Processing triggers for libc-bin (2.40-1ubuntu3) ... 200s Processing triggers for man-db (2.13.0-1) ... 201s Processing triggers for udev (256.5-2ubuntu4) ... 209s (Reading database ... 88616 files and directories currently installed.) 209s Removing autopkgtest-satdep (0) ... 210s autopkgtest [02:43:49]: test command1: set -efu ; cp bootstrap.py pyproject.toml run_tests.py README.rst "$AUTOPKGTEST_TMP" ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py run_tests.py -v -m --installed ; done 210s autopkgtest [02:43:49]: test command1: [----------------------- 210s Testing with python3.12: 210s WARNING:run_tests:Test fabio 2024.4.0 from /usr/lib/python3/dist-packages/fabio 210s test_iter_abort_iteration (fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration) ... ok 210s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration 210s testcopy (fabio.test.test_fabio_image.Test50000.testcopy) 210s test the copy statement ... ok 210s INFO:memProf:Time: 0.009s RAM: 6.144 Mb fabio.test.test_fabio_image.Test50000.testcopy 210s testgetmax (fabio.test.test_fabio_image.Test50000.testgetmax) 210s check max ... ok 210s INFO:memProf:Time: 0.003s RAM: 0.744 Mb fabio.test.test_fabio_image.Test50000.testgetmax 210s testgetmean (fabio.test.test_fabio_image.Test50000.testgetmean) 211s check mean ... ok 211s INFO:memProf:Time: 0.004s RAM: 0.120 Mb fabio.test.test_fabio_image.Test50000.testgetmean 211s testgetmin (fabio.test.test_fabio_image.Test50000.testgetmin) 211s check min ... ok 211s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_fabio_image.Test50000.testgetmin 211s testgetstddev (fabio.test.test_fabio_image.Test50000.testgetstddev) 211s check stddev ... ok 211s INFO:memProf:Time: 0.008s RAM: 8.200 Mb fabio.test.test_fabio_image.Test50000.testgetstddev 211s testRebin (fabio.test.test_fabio_image.TestSlices.testRebin) 211s Test the rebin method ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testRebin 211s testgetmax (fabio.test.test_fabio_image.TestSlices.testgetmax) 211s check max ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmax 211s testgetmin (fabio.test.test_fabio_image.TestSlices.testgetmin) 211s check min ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmin 211s testintegratearea (fabio.test.test_fabio_image.TestSlices.testintegratearea) 211s check integrations ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testintegratearea 211s testFlat (fabio.test.test_fabio_image.TestOpen.testFlat) 211s no compression ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testFlat 211s test_badtype (fabio.test.test_fabio_image.TestOpen.test_badtype) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_badtype 211s test_pathlib (fabio.test.test_fabio_image.TestOpen.test_pathlib) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_pathlib 211s testbz2 (fabio.test.test_fabio_image.TestOpen.testbz2) 211s bzipped ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testbz2 211s testgz (fabio.test.test_fabio_image.TestOpen.testgz) 211s gzipped ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testgz 211s testpil (fabio.test.test_fabio_image.TestPilImage.testpil) ... WARNING:fabio.DEPRECATION:Function toPIL16 is deprecated since fabio version 0.9. Reason: Not maintained. Use 'fabio.utils.pilutils.create_pil_16' instead. 211s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 209, in testpil 211s pim = img.toPIL16() 211s ok 211s INFO:memProf:Time: 0.047s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage.testpil 211s testpil (fabio.test.test_fabio_image.TestPilImage2.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:232: RuntimeWarning: invalid value encountered in cast 211s return (numpy.random.random(shape) * sys.maxsize / 10).astype(typ) 211s 211s ok 211s INFO:memProf:Time: 0.055s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage2.testpil 211s testpil (fabio.test.test_fabio_image.TestPilImage3.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:240: RuntimeWarning: invalid value encountered in cast 211s return ((numpy.random.random(shape) - 0.5) * sys.maxsize / 10).astype(typ) 211s 211s ok 211s INFO:memProf:Time: 0.056s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage3.testpil 211s test_cleanup_pilimage_cache (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache) ... WARNING:fabio.DEPRECATION:Function pilimage is deprecated. Reason: Setting pilimage not supported. This attrbute is not cached anymore. 211s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 257, in test_cleanup_pilimage_cache 211s image.pilimage = None 211s ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache 211s test_patch_dim (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim) ... WARNING:fabio.DEPRECATION:Function dim2 is deprecated. Reason: dim2 should not be updated. 211s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 211s image.dim2, image.dim1 = data.shape 211s WARNING:fabio.DEPRECATION:Function dim1 is deprecated. Reason: dim1 should not be updated. 211s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 211s image.dim2, image.dim1 = data.shape 211s ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim 211s test_many_cases (fabio.test.test_filenames.TestFilenames.test_many_cases) 211s loop over CASES ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_many_cases 211s test_more_cases (fabio.test.test_filenames.TestFilenames.test_more_cases) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases 211s test_more_cases_jump (fabio.test.test_filenames.TestFilenames.test_more_cases_jump) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases_jump 211s test_FileNameObject_can_iterate (fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate) 211s Regression test for Fable ... ok 211s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate 211s test_files_are_being_opened (fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened) 211s Regression test for Fable ... ok 211s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened 211s testfirst (fabio.test.test_file_series.TestRandomSeries.testfirst) 211s check first ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testfirst 211s testjump (fabio.test.test_file_series.TestRandomSeries.testjump) 211s check jump ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testjump 211s testlast (fabio.test.test_file_series.TestRandomSeries.testlast) 211s check first ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testlast 211s testfirst (fabio.test.test_file_series.TestEdfNumbered.testfirst) 211s first in series ... ok 211s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testfirst 211s testlast (fabio.test.test_file_series.TestEdfNumbered.testlast) 211s last in series ... ok 211s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlast 211s testlen (fabio.test.test_file_series.TestEdfNumbered.testlen) 211s check len ... ok 211s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlen 211s testnext (fabio.test.test_file_series.TestEdfNumbered.testnext) 211s check all in order ... ok 211s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnext 211s testnextjump (fabio.test.test_file_series.TestEdfNumbered.testnextjump) 211s check current ... ok 211s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnextjump 211s testprevious (fabio.test.test_file_series.TestEdfNumbered.testprevious) 211s check all in order ... ok 211s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevious 211s testprevjump (fabio.test.test_file_series.TestEdfNumbered.testprevjump) 211s check current ... ok 211s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevjump 211s test_anyframe_frames (fabio.test.test_file_series.TestFileSeries.test_anyframe_frames) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_frames 211s test_anyframe_getframe (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe 211s test_anyframe_getframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes) ... ok 211s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes 211s test_anyframe_nframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes 211s test_anyframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles 211s test_filename_generator (fabio.test.test_file_series.TestFileSeries.test_filename_generator) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_generator 211s test_filename_iterator (fabio.test.test_file_series.TestFileSeries.test_filename_iterator) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_iterator 211s test_multiframe_frames (fabio.test.test_file_series.TestFileSeries.test_multiframe_frames) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_frames 211s test_multiframe_getframe (fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe 211s test_multiframe_nframes (fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes 211s test_multiframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles 211s test_singleframe_frames (fabio.test.test_file_series.TestFileSeries.test_singleframe_frames) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_frames 211s test_singleframe_getframe (fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe 211s test_singleframe_nframes (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes 211s test_singleframe_nframes2 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2 211s test_singleframe_nframes3 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3 211s test_singleframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles 211s test_with_filename_series (fabio.test.test_file_series.TestFileSeries.test_with_filename_series) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_filename_series 211s test_with_numbered_file_series (fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series 211s test_next1 (fabio.test.test_filename_steps.TestNext.test_next1) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestNext.test_next1 211s test_prev1 (fabio.test.test_filename_steps.TestPrev.test_prev1) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestPrev.test_prev1 211s test_jump1 (fabio.test.test_filename_steps.TestJump.test_jump1) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestJump.test_jump1 211s testheader (fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 212s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.img.bz2 successfully downloaded. 216s ok 216s INFO:memProf:Time: 4.771s RAM: 50.032 Mb fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader 216s testcase (fabio.test.test_open_header.Test1.testcase) 216s check openheader can read edf headers ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675_header_only.edf.bz2') 216s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675_header_only.edf.bz2 successfully downloaded. 216s ok 216s INFO:memProf:Time: 0.152s RAM: 0.000 Mb fabio.test.test_open_header.Test1.testcase 216s testAdsc (fabio.test.test_open_image.TestOpenDtrek.testAdsc) 216s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 216s ok 216s INFO:memProf:Time: 0.089s RAM: 147.536 Mb fabio.test.test_open_image.TestOpenDtrek.testAdsc 216s testAdscBz2 (fabio.test.test_open_image.TestOpenDtrek.testAdscBz2) 216s openimage opening adsc bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 219s ok 219s INFO:memProf:Time: 3.214s RAM: 1.636 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscBz2 219s testAdscGz (fabio.test.test_open_image.TestOpenDtrek.testAdscGz) 219s openimage opening adsc gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.gz') 219s ok 219s INFO:memProf:Time: 0.248s RAM: 13.104 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscGz 219s testBruker (fabio.test.test_open_image.TestOpenBruker.testBruker) 219s openimage opening bruker ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 220s INFO:fabio.utils.ExternalResources:Image Cr8F8140k103.0026.bz2 successfully downloaded. 220s ok 220s INFO:memProf:Time: 0.500s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBruker 220s testBrukerBz2 (fabio.test.test_open_image.TestOpenBruker.testBrukerBz2) 220s openimage opening bruker bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 220s ok 220s INFO:memProf:Time: 0.053s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerBz2 220s testBrukerGz (fabio.test.test_open_image.TestOpenBruker.testBrukerGz) 220s openimage opening bruker gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.gz') 220s ok 220s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerGz 220s testEdf (fabio.test.test_open_image.TestOpenEdf.testEdf) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 221s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675.edf.bz2 successfully downloaded. 222s ok 222s INFO:memProf:Time: 2.128s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdf 222s testEdfBz2 (fabio.test.test_open_image.TestOpenEdf.testEdfBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 225s ok 225s INFO:memProf:Time: 2.983s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfBz2 225s testEdfGz (fabio.test.test_open_image.TestOpenEdf.testEdfGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.gz') 225s ok 225s INFO:memProf:Time: 0.214s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfGz 225s testMask (fabio.test.test_open_image.TestOpenMask.testMask) 225s openimage opening fit2d msk ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 225s INFO:fabio.utils.ExternalResources:Image face.msk.bz2 successfully downloaded. 225s ok 225s INFO:memProf:Time: 0.148s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMask 225s testMaskBz2 (fabio.test.test_open_image.TestOpenMask.testMaskBz2) 225s openimage opening fit2d msk bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 225s ok 225s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskBz2 225s testMaskGz (fabio.test.test_open_image.TestOpenMask.testMaskGz) 225s openimage opening fit2d msk gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.gz') 225s ok 225s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskGz 225s testMccd (fabio.test.test_open_image.TestOpenMccd.testMccd) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 226s INFO:fabio.utils.ExternalResources:Image somedata_0001.mccd.bz2 successfully downloaded. 226s ok 226s INFO:memProf:Time: 0.836s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccd 226s testMccdBz2 (fabio.test.test_open_image.TestOpenMccd.testMccdBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 226s ok 226s INFO:memProf:Time: 0.227s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdBz2 226s testMccdGz (fabio.test.test_open_image.TestOpenMccd.testMccdGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.gz') 226s ok 226s INFO:memProf:Time: 0.024s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdGz 226s testOxd (fabio.test.test_open_image.TestOpenOxd.testOxd) 226s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 227s INFO:fabio.utils.ExternalResources:Image b191_1_9_1.img.bz2 successfully downloaded. 227s ok 227s INFO:memProf:Time: 0.462s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxd 227s testOxdUnc (fabio.test.test_open_image.TestOpenOxd.testOxdUnc) 227s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 227s INFO:fabio.utils.ExternalResources:Image b191_1_9_1_uncompressed.img.bz2 successfully downloaded. 229s ok 229s INFO:memProf:Time: 1.700s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxdUnc 229s testComp (fabio.test.test_compression.TestByteOffset.testComp) ... ok 229s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testComp 229s testSC (fabio.test.test_compression.TestByteOffset.testSC) 229s test that datasets are unchanged after various compression/decompressions ... ok 229s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testSC 229s test_from_time (fabio.test.test_nexus.TestNexus.test_from_time) ... ok 229s INFO:memProf:Time: 0.017s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_from_time 229s test_nexus (fabio.test.test_nexus.TestNexus.test_nexus) 229s Test creation of Nexus files ... ok 229s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_nexus 229s testDefaultOption (fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -F=msk -o=output 229s INFO:fabio.test.test_fabio_convert:Return code: 0 229s ok 229s INFO:memProf:Time: 0.274s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption 229s testForceOption (fabio.test.test_fabio_convert.TestFabioConvert.testForceOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -f -F=msk -o=output 229s INFO:fabio.test.test_fabio_convert:Return code: 0 229s ok 229s INFO:memProf:Time: 0.266s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testForceOption 229s testFullFormatName (fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=numpyimage -o=output 229s INFO:fabio.test.test_fabio_convert:Return code: 0 229s ok 229s INFO:memProf:Time: 0.262s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName 229s testInteractiveOption (fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -i -F=msk -o=output 230s INFO:fabio.test.test_fabio_convert:Return code: 0 230s ok 230s INFO:memProf:Time: 0.263s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption 230s testNoClobberOption (fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -F=msk -o=output 230s INFO:fabio.test.test_fabio_convert:Return code: 0 230s ok 230s INFO:memProf:Time: 0.266s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption 230s testRemoveDestinationOption (fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --remove-destination -F=msk -o=output 230s INFO:fabio.test.test_fabio_convert:Return code: 0 230s ok 230s INFO:memProf:Time: 0.265s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption 230s testSingleFile (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -o=output/03.msk 230s INFO:fabio.test.test_fabio_convert:Return code: 0 230s ok 230s INFO:memProf:Time: 0.267s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile 230s testSingleFileToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -F=msk -o=output 231s INFO:fabio.test.test_fabio_convert:Return code: 0 231s ok 231s INFO:memProf:Time: 0.268s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir 231s testSingleFileWithWildcardToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=msk -o=output 231s INFO:fabio.test.test_fabio_convert:Return code: 0 231s ok 231s INFO:memProf:Time: 0.270s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir 231s testUpdateOption (fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --update -F=msk -o=output 231s INFO:fabio.test.test_fabio_convert:Return code: 0 231s ok 231s INFO:memProf:Time: 0.271s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption 231s test_missing_file (fabio.test.test_failing_files.TestFailingFiles.test_missing_file) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_missing_file 231s test_wrong_dm3 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3 231s test_wrong_edf (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf 231s test_wrong_edf2 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2 231s test_wrong_format (fabio.test.test_failing_files.TestFailingFiles.test_wrong_format) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_format 231s test_wrong_msk (fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk 231s test_wrong_numpy (fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy 231s test_annotation (fabio.test.test_formats.TestRegistration.test_annotation) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_annotation 231s test_deprecated_fabioimage_factory (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory) 231s Check that it is still working ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory 231s test_deprecated_fabioimage_factory_missing_format (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format) 231s Check that it is still working ... ok 231s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format 231s test_fabio_factory (fabio.test.test_formats.TestRegistration.test_fabio_factory) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory 231s test_fabio_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format 231s test_fabioformats_factory (fabio.test.test_formats.TestRegistration.test_fabioformats_factory) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory 231s test_fabioformats_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format 231s test_function (fabio.test.test_formats.TestRegistration.test_function) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_function 231s test_not_existing (fabio.test.test_formats.TestRegistration.test_not_existing) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_not_existing 231s test_edf_to_tiff (fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf') 231s INFO:fabio.utils.ExternalResources:Image face.edf.bz2 successfully downloaded. 231s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 231s ok 231s INFO:memProf:Time: 0.164s RAM: 0.000 Mb fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff 231s test_append (fabio.test.test_tiffio.TestTiffIO.test_append) ... ok 231s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_append 231s test_read (fabio.test.test_tiffio.TestTiffIO.test_read) ... INFO:fabio.test.test_tiffio:nRows = 100 231s INFO:fabio.test.test_tiffio:nColumns = 100 231s INFO:fabio.test.test_tiffio:nBits = 16 231s INFO:fabio.test.test_tiffio:compression = False 231s INFO:fabio.test.test_tiffio:compression_type = 1 231s INFO:fabio.test.test_tiffio:imageDescription = Title=1st 231s 231s INFO:fabio.test.test_tiffio:stripOffsets = [168] 231s INFO:fabio.test.test_tiffio:rowsPerStrip = 100 231s INFO:fabio.test.test_tiffio:stripByteCounts = [20000] 231s INFO:fabio.test.test_tiffio:software = PyMca.TiffIO 231s INFO:fabio.test.test_tiffio:date = Unknown Date 231s INFO:fabio.test.test_tiffio:sampleFormat = 1 231s INFO:fabio.test.test_tiffio:photometricInterpretation = 1 231s INFO:fabio.test.test_tiffio:info = {'Title': '1st'} 231s INFO:fabio.test.test_tiffio:data [0, 0:10] = [0 1 2 3 4 5 6 7 8 9] 231s ok 231s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_read 231s test_write (fabio.test.test_tiffio.TestTiffIO.test_write) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_write 231s test_single_frame_iterator (fabio.test.test_frames.TestFabioImage.test_single_frame_iterator) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestFabioImage.test_single_frame_iterator 231s test_content (fabio.test.test_frames.TestVirtualEdf.test_content) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_content 231s test_frames_abort_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration 231s test_frames_full_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration 231s test_frames_random_access (fabio.test.test_frames.TestVirtualEdf.test_frames_random_access) ... ok 231s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_random_access 231s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 232s INFO:fabio.utils.ExternalResources:Image multiframes.edf.bz2 successfully downloaded. 232s test_content (fabio.test.test_frames.TestEdf.test_content) ... ok 232s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_content 232s test_frames_abort_iteration (fabio.test.test_frames.TestEdf.test_frames_abort_iteration) ... ok 232s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_abort_iteration 232s test_frames_full_iteration (fabio.test.test_frames.TestEdf.test_frames_full_iteration) ... ok 232s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_full_iteration 232s test_frames_random_access (fabio.test.test_frames.TestEdf.test_frames_random_access) ... ok 232s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_random_access 232s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 232s INFO:fabio.utils.ExternalResources:Image multiframes.tif.bz2 successfully downloaded. 232s test_content (fabio.test.test_frames.TestTiff.test_content) ... ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_content 232s test_frames_abort_iteration (fabio.test.test_frames.TestTiff.test_frames_abort_iteration) ... ok 232s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_abort_iteration 232s test_frames_full_iteration (fabio.test.test_frames.TestTiff.test_frames_full_iteration) ... ok 232s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_full_iteration 232s test_frames_random_access (fabio.test.test_frames.TestTiff.test_frames_random_access) ... ok 232s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_random_access 232s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 232s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 232s test_frames_abort_iteration (fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration) ... ok 232s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration 232s test_frames_full_iteration (fabio.test.test_frames.TestFileSeries.test_frames_full_iteration) ... ok 232s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_full_iteration 232s test_frames_random_access (fabio.test.test_frames.TestFileSeries.test_frames_random_access) ... ok 232s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_random_access 232s test_open (fabio.test.test_fabio.TestFabio.test_open) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open 232s test_open_bytesio (fabio.test.test_fabio.TestFabio.test_open_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_bytesio 232s test_open_fabio_bytesio (fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio 232s test_open_series (fabio.test.test_fabio.TestFabio.test_open_series) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series 232s test_open_series_first_filename (fabio.test.test_fabio.TestFabio.test_open_series_first_filename) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_first_filename 232s test_open_series_with (fabio.test.test_fabio.TestFabio.test_open_series_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_with 232s test_open_with (fabio.test.test_fabio.TestFabio.test_open_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_with 232s test_getstats (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats) 232s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats 232s test_headers (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 232s ok 232s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers 232s test_read (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read) 232s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read 232s test_getstats (fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats) 232s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 232s ok 232s INFO:memProf:Time: 0.063s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats 232s test_headers (fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers 232s test_read (fabio.test.codecs.test_edfimage.TestBzipEdf.test_read) 232s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_read 232s test_getstats (fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats) 232s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 232s ok 232s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats 232s test_headers (fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers 232s test_read (fabio.test.codecs.test_edfimage.TestGzipEdf.test_read) 232s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 232s ok 232s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_read 232s test_read (fabio.test.codecs.test_edfimage.TestEdfs.test_read) 232s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 232s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 232s INFO:fabio.utils.ExternalResources:Image id13_badPadding.edf.bz2 successfully downloaded. 233s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf Mean: exp=1504.29, obt=1504.291387796402 233s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf StdDev: exp=217.61, obt=217.60628547694915 235s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 Mean: exp=1504.29, obt=1504.291387796402 235s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 StdDev: exp=217.61, obt=217.60628547694915 235s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz Mean: exp=1504.29, obt=1504.291387796402 235s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz StdDev: exp=217.61, obt=217.60628547694915 235s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf Mean: exp=275.62, obt=275.6165885925293 235s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf StdDev: exp=583.44, obt=583.4356660155632 235s ok 235s INFO:memProf:Time: 3.039s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_read 235s test_rebin (fabio.test.codecs.test_edfimage.TestEdfs.test_rebin) 235s test the rebin of edfdata ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 235s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 235s ok 235s INFO:memProf:Time: 0.016s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_rebin 235s test_read (fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read) 235s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfGzip_U16.edf.bz2') 236s INFO:fabio.utils.ExternalResources:Image edfGzip_U16.edf.bz2 successfully downloaded. 236s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf.bz2') 237s INFO:fabio.utils.ExternalResources:Image edfCompressed_U16.edf.bz2 successfully downloaded. 237s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfUncompressed_U16.edf.bz2') 238s INFO:fabio.utils.ExternalResources:Image edfUncompressed_U16.edf.bz2 successfully downloaded. 241s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 241s INFO:fabio.edfimage:Data stream is padded : 8389062 > required 8388608 bytes 241s ok 241s INFO:memProf:Time: 5.802s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read 241s test_getFrame_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 241s INFO:fabio.utils.ExternalResources:Image MultiFrame.edf.bz2 successfully downloaded. 244s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 244s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame0.edf.bz2 successfully downloaded. 245s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 246s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame1.edf.bz2 successfully downloaded. 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s ok 248s INFO:memProf:Time: 6.909s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono 248s test_getFrame_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s ok 248s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi 248s test_next_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s ok 248s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi 248s test_openimage_multiframes (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes) 248s test if openimage can directly read first or second frame of a multi-frame ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s ok 248s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes 248s test_previous_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s ok 248s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono 248s test_previous_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 248s ok 248s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi 248s test_fastread (fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 248s ok 248s INFO:memProf:Time: 0.558s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread 248s testBzip2 (fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2) ... ok 248s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2 248s testFlat (fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat) ... ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat 248s testGzip (fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip) ... ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip 248s test_bug_27 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27) 248s import fabio ... ok 248s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27 248s test_bug_459 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459) ... ok 248s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459 248s test_remove_metadata_header (fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 248s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 248s ok 248s INFO:memProf:Time: 0.022s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header 248s test_base (fabio.test.codecs.test_edfimage.TestBadFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 0) misses mandatory keys: HEADERID SIZE 248s INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 1) misses mandatory keys: HEADERID SIZE 248s ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_base 248s test_empty (fabio.test.codecs.test_edfimage.TestBadFiles.test_empty) ... ok 248s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_empty 248s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header.edf (frame 0) misses mandatory keys: HEADERID SIZE 248s ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header 248s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 248s INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 1) misses mandatory keys: HEADERID SIZE 248s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 248s ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data 248s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 248s INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 1) misses mandatory keys: HEADERID SIZE 248s ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data 248s test_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header) ... ok 248s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header 248s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 248s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 248s ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data 248s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 248s ok 248s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data 248s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic) ... ok 248s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic 248s test_base (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 248s INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 248s ok 248s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base 248s test_empty (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty) ... ok 248s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty 248s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 248s ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header 248s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 248s INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 248s ok 248s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data 248s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 248s INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 248s ok 248s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data 248s test_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header) ... ok 248s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header 248s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 248s ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data 248s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4g_9e92__ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 248s ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data 248s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic) ... ok 248s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic 248s test_multi_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame) 248s Test iterator on a multi-frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 249s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 249s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 250s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 250s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 250s ok 250s INFO:memProf:Time: 1.661s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame 250s test_single_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame) 250s Test iterator on a single frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf') 250s ok 250s INFO:memProf:Time: 0.559s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame 251s test_all_images (fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images) ... INFO:fabio.utils.ExternalResources:Image sphere2saxs_output.tar.bz2 successfully downloaded. 251s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 251s fd.extractall(output) 251s 251s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 251s INFO:fabio.edfimage:Data stream is padded : 80484 > required 80000 bytes 251s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 251s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 251s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 251s ok 251s INFO:memProf:Time: 0.561s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images 251s testNonAsciiHeader (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader) 251s Non-ascii characters are skipped. ... WARNING:fabio.edfimage:Non ASCII in key-value: Drop b'mykey' = b'\xc3\xa9yvalue' 251s ok 251s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader 251s testReadBadPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding) 251s Some old data were found with headers padded with 0xcd (issue #373) ... ok 251s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding 251s testReadGoodPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding) ... ok 251s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding 251s testReadZeroPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding) ... ok 251s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding 251s test_edf6_single_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz) 252s Test reading gzipped data files linking to an external binary data file. ... INFO:fabio.utils.ExternalResources:Image ehf_images2.tar.bz2 successfully downloaded. 252s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 252s fd.extractall(output) 252s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 252s ok 252s INFO:memProf:Time: 0.810s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz 252s test_edfblocktypes (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes) 252s Test reading (gzipped) extended edf multi frame data files with and without a general block ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 252s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 252s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 252s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 252s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 252s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 252s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 252s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 252s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 252s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 252s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 252s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 252s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 252s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 252s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 252s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 252s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 252s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 252s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 252s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 252s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 252s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 252s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 252s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 252s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 252s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 252s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 252s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 252s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 252s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 252s ok 252s INFO:memProf:Time: 0.235s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes 252s test_edfmulti_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk) 252s Reading an uncompressed edf-multi-frame-file with references to data ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 252s fd.extractall(output) 252s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 252s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 252s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 252s ok 252s INFO:memProf:Time: 0.326s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk 252s test_edfmulti_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz) 253s Test reading the files of the test test_edfmulti_raw_bf_gblk after ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 253s ok 253s INFO:memProf:Time: 0.348s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz 253s test_edfmulti_raw_dark_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk) 253s Linking data of several frames to different parts of a single external ... INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 253s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 253s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 253s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 253s ok 253s INFO:memProf:Time: 0.197s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk 253s test_edfsingle_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk) 253s Reading an uncompressed edf-single-frame-file with references to data ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 253s ok 253s INFO:memProf:Time: 0.197s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk 253s test_edfsingle_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz) 253s Test reading gzipped data files linking to an external binary data file. ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 253s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 253s ok 253s INFO:memProf:Time: 0.199s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz 253s test_pitfalls (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls) 253s multi5+headerblob_edf1.edf.gz ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 254s ok 254s INFO:memProf:Time: 0.238s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls 254s test_special (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special) 254s 09_special/face_ok.edf.gz ... INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 254s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 254s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 254s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 254s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 254s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 254s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 254s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 254s ok 254s INFO:memProf:Time: 0.209s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special 254s test_bug_388 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 254s INFO:fabio.utils.ExternalResources:Image run2_1_00148.edf.bz2 successfully downloaded. 280s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 281s INFO:fabio.utils.ExternalResources:Image run2_1_00148.cbf.bz2 successfully downloaded. 282s ok 282s INFO:memProf:Time: 28.502s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388 282s test_bug_408 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408) 282s Bug when reading files generated by XDS ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 282s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 282s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XDS.cbf.bz2') 283s INFO:fabio.utils.ExternalResources:Image XDS.cbf.bz2 successfully downloaded. 283s ok 283s INFO:memProf:Time: 1.136s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408 283s test_bug_528 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528) 283s Bug when writing/reading small files ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 283s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 283s ok 283s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528 283s test_bug_535 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535) 283s Bug when reading files with long path in header ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 283s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 283s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref-test_5_0001.cbf') 284s INFO:fabio.utils.ExternalResources:Image ref-test_5_0001.cbf.bz2 successfully downloaded. 287s ok 287s INFO:memProf:Time: 3.867s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535 287s test_byte_offset (fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset) 287s check byte offset algorithm ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 287s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 287s INFO:fabio.test.codecs.test_cbfimage:Timing for Numpy method : 0.177s 287s INFO:fabio.test.codecs.test_cbfimage:Timing for Cython method : 0.012s, max delta= 0 287s ok 287s INFO:memProf:Time: 0.251s RAM: 2.228 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset 287s test_cif (fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 287s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 288s ok 288s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif 288s test_consitency_convert (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert) 288s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 288s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 288s ok 288s INFO:memProf:Time: 0.104s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert 288s test_consitency_manual (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual) 288s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 288s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 288s ok 288s INFO:memProf:Time: 0.110s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual 288s test_read (fabio.test.codecs.test_cbfimage.TestCbfReader.test_read) 288s check whole reader ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 288s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 288s INFO:fabio.test.codecs.test_cbfimage:Reading CBF took 0.028s whereas the same EDF took 0.000s 288s ok 288s INFO:memProf:Time: 0.056s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_read 288s test_unicode (fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode) 288s Test if an image can be read and saved to an unicode named ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 288s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 288s ok 288s INFO:memProf:Time: 0.107s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode 288s test_write (fabio.test.codecs.test_cbfimage.TestCbfReader.test_write) 288s Rest writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 288s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 288s ok 288s INFO:memProf:Time: 0.105s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_write 288s testsame (fabio.test.codecs.test_dtrekimage.TestMatch.testsame) 288s test ADSC image match to EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 288s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.edf.bz2') 289s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.edf.bz2 successfully downloaded. 325s ok 325s INFO:memProf:Time: 36.534s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestMatch.testsame 325s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 325s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('HSA_1_5mg_C1_0004.img.bz2') 325s INFO:fabio.utils.ExternalResources:Image HSA_1_5mg_C1_0004.img.bz2 successfully downloaded. 326s test_read (fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read) 328s check we can read flat ADSC images ... ok 328s INFO:memProf:Time: 1.634s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read 328s test_write_and_read (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read) ... WARNING:fabio.dtrekimage:Data type uint64 unsupported. Store it as uint32. 328s WARNING:fabio.dtrekimage:Data type int64 unsupported. Store it as int32. 328s WARNING:fabio.dtrekimage:Data type float16 unsupported. Store it as float32. 328s ok 328s INFO:memProf:Time: 0.024s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read 328s test_write_and_read_cube (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube) ... ok 328s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube 328s test_write_and_read_empty (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty) ... ok 328s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty 328s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch) 328s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 328s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 328s ok 328s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch 328s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch) 328s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 328s INFO:fabio.utils.ExternalResources:Image fit2d_click.msk.bz2 successfully downloaded. 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 328s INFO:fabio.utils.ExternalResources:Image fit2d_click.edf.bz2 successfully downloaded. 328s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/fit2d_click.edf (frame 0) misses mandatory keys: SIZE 328s ok 328s INFO:memProf:Time: 0.351s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch 328s test_read (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read) 328s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 328s ok 328s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read 328s testBzip2 (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2) ... ok 328s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2 328s testFlat (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat) ... ok 328s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat 328s testGzip (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip) ... ok 328s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.spr.bz2') 329s INFO:fabio.utils.ExternalResources:Image example.spr.bz2 successfully downloaded. 331s test_read (fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read) 334s check we can read flat ADSC images ... ok 334s INFO:memProf:Time: 3.127s RAM: 0.000 Mb fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read 334s test_read (fabio.test.codecs.test_geimage.TestGE.test_read) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.bz2') 334s INFO:fabio.utils.ExternalResources:Image GE_aSI_detector_image_1529.bz2 successfully downloaded. 337s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.gz') 337s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529') 340s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_intact_header.ge') 341s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_intact_header.ge.bz2 successfully downloaded. 343s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_blanked_header.ge') 344s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_blanked_header.ge.bz2 successfully downloaded. 345s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('dark_before_000428.edf.ge5') 347s INFO:fabio.utils.ExternalResources:Image dark_before_000428.edf.ge5.bz2 successfully downloaded. 365s ok 365s INFO:memProf:Time: 31.435s RAM: 0.000 Mb fabio.test.codecs.test_geimage.TestGE.test_read 365s test_aux (fabio.test.codecs.test_mar345image.TestMar345.test_aux) 365s test auxillary functions ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 366s INFO:fabio.utils.ExternalResources:Image example.mar2300.bz2 successfully downloaded. 367s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 367s INFO:fabio.utils.ExternalResources:Image Fe3O4_023_101.mar2560.bz2 successfully downloaded. 368s ok 368s INFO:memProf:Time: 2.734s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_aux 368s test_byteswap_write (fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write) 368s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 368s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 373s ok 373s INFO:memProf:Time: 4.781s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write 373s test_memoryleak (fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak) 373s This test takes a lot of time, so only in debug mode. ... skipped 'very slow test' 373s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak 373s test_read (fabio.test.codecs.test_mar345image.TestMar345.test_read) 373s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 373s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 373s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300') 373s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 374s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.gz') 374s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560') 375s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 375s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.gz') 375s ok 375s INFO:memProf:Time: 2.580s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_read 375s test_write (fabio.test.codecs.test_mar345image.TestMar345.test_write) 375s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 375s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 380s ok 380s INFO:memProf:Time: 4.763s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_write 380s test_read (fabio.test.codecs.test_brukerimage.TestBruker.test_read) 380s see if we can read the test image ... ok 380s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBruker.test_read 380s test_read (fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read) 380s see if we can read the test image ... ok 380s INFO:memProf:Time: 0.033s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read 380s test_read (fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read) 380s see if we can read the test image ... ok 380s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read 380s test_read (fabio.test.codecs.test_brukerimage.TestRealImg.test_read) 380s check we can read bruker images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 380s ok 380s INFO:memProf:Time: 0.029s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_read 380s test_write (fabio.test.codecs.test_brukerimage.TestRealImg.test_write) 380s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 380s ok 380s INFO:memProf:Time: 0.149s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_write 380s test_linear (fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear) 380s test for self consistency of random data read/write ... WARNING:fabio.brukerimage:performing correction with slope=5.9603443958095616e-08, offset=1.2030042e-05 (LINEAR=5.9603443958095616e-08 1.2030042e-05) 380s ok 380s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear 380s test_conversion (fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 383s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.npy.bz2 successfully downloaded. 383s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 383s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.sfrm.bz2 successfully downloaded. 383s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testcbf.cbf.bz2') 383s INFO:fabio.utils.ExternalResources:Image testcbf.cbf.bz2 successfully downloaded. 383s ok 383s INFO:memProf:Time: 2.634s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion 383s test_read (fabio.test.codecs.test_bruker100image.TestBruker100.test_read) 383s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 383s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 383s ok 383s INFO:memProf:Time: 0.023s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_read 383s test_same (fabio.test.codecs.test_bruker100image.TestBruker100.test_same) 383s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 383s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 383s ok 383s INFO:memProf:Time: 0.111s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_same 383s test_split_merge (fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge) 383s Pretty challanging random example ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 383s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 383s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (65140,) overflow1 (100,) overflow2: (96,) 383s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (1596,) overflow1 (151,) overflow2: (96,) 383s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (0,) overflow1 (1602,) overflow2: (1547,) 383s ok 383s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge 383s test_write (fabio.test.codecs.test_bruker100image.TestBruker100.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 383s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 383s ok 383s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_write 383s test_read (fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read) 383s check we can read MarCCD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('corkcont2_H_0089.mccd.bz2') 384s INFO:fabio.utils.ExternalResources:Image corkcont2_H_0089.mccd.bz2 successfully downloaded. 386s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 386s ok 386s INFO:memProf:Time: 3.449s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read 386s test_read_openimage (fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage) ... ok 386s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage 386s test_read (fabio.test.codecs.test_oxdimage.TestOxd.test_read) 386s Test reading of compressed OXD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 386s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 386s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 387s INFO:fabio.utils.ExternalResources:Image 100nmfilmonglass_1_1.img.bz2 successfully downloaded. 387s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 388s INFO:fabio.utils.ExternalResources:Image pilatus300k.rod_img.bz2 successfully downloaded. 389s INFO:fabio.OXDimage:Compressed with the TY5 compression 389s INFO:fabio.OXDimage:TY5 decompression is slow for now 392s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 392s ok 392s INFO:memProf:Time: 5.182s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_read 392s test_write (fabio.test.codecs.test_oxdimage.TestOxd.test_write) 392s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 392s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 392s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 392s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 392s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 392s INFO:fabio.OXDimage:Compressed with the TY5 compression 392s INFO:fabio.OXDimage:TY5 decompression is slow for now 394s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 394s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 394s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 394s ok 394s INFO:memProf:Time: 2.711s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_write 394s test_same (fabio.test.codecs.test_oxdimage.TestOxdSame.test_same) 394s test if images are actually the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 394s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 394s ok 394s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdSame.test_same 394s test_same (fabio.test.codecs.test_oxdimage.TestOxdBig.test_same) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.img.bz2') 395s INFO:fabio.utils.ExternalResources:Image d80_60s.img.bz2 successfully downloaded. 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.edf.bz2') 401s INFO:fabio.utils.ExternalResources:Image d80_60s.edf.bz2 successfully downloaded. 406s WARNING:fabio.edfimage:Unknown compression scheme TY1 406s ok 406s INFO:memProf:Time: 11.910s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdBig.test_same 406s test_convert (fabio.test.codecs.test_oxdimage.TestConvert.test_convert) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 406s WARNING:fabio.OXDimage:Enforce TY1 compression 406s ok 406s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestConvert.test_convert 406s test_read (fabio.test.codecs.test_kcdimage.TestKcd.test_read) 406s check we can read kcd images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 407s INFO:fabio.utils.ExternalResources:Image i01f0001.kcd.bz2 successfully downloaded. 408s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 409s INFO:fabio.utils.ExternalResources:Image i01f0001.edf.bz2 successfully downloaded. 412s ok 412s INFO:memProf:Time: 5.456s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_read 412s test_same (fabio.test.codecs.test_kcdimage.TestKcd.test_same) 412s see if we can read kcd images and if they are the same as the EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 412s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 412s ok 412s INFO:memProf:Time: 0.355s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_same 412s test_bug502 (fabio.test.codecs.test_tifimage.TestTif.test_bug502) 412s Test the reading of a frame with wrong Photometric interpretation ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.npy') 413s INFO:fabio.utils.ExternalResources:Image frame_00017.npy.bz2 successfully downloaded. 423s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.tif') 424s INFO:fabio.utils.ExternalResources:Image frame_00017.tif.bz2 successfully downloaded. 434s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 434s ok 434s INFO:memProf:Time: 22.098s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_bug502 434s test_frame (fabio.test.codecs.test_tifimage.TestTif.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 435s INFO:fabio.utils.ExternalResources:Image Feb09-bright-00.300s_WAXS.bz2 successfully downloaded. 435s WARNING:fabio.TiffIO:Bogus StripByteCounts information 435s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 435s WARNING:fabio.TiffIO:Bogus StripByteCounts information 435s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 436s WARNING:fabio.TiffIO:Bogus StripByteCounts information 436s ok 436s INFO:memProf:Time: 1.463s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_frame 436s test_header (fabio.test.codecs.test_tifimage.TestTif.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 436s WARNING:fabio.TiffIO:Bogus StripByteCounts information 436s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 436s WARNING:fabio.TiffIO:Bogus StripByteCounts information 436s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 436s WARNING:fabio.TiffIO:Bogus StripByteCounts information 436s ok 436s INFO:memProf:Time: 0.191s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_header 436s test_read (fabio.test.codecs.test_tifimage.TestTif.test_read) 436s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 436s WARNING:fabio.TiffIO:Bogus StripByteCounts information 436s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 436s WARNING:fabio.TiffIO:Bogus StripByteCounts information 436s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 436s WARNING:fabio.TiffIO:Bogus StripByteCounts information 436s ok 436s INFO:memProf:Time: 0.212s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_read 436s test1 (fabio.test.codecs.test_tifimage.TestGzipTif.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 436s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.tif.bz2 successfully downloaded. 437s ok 437s INFO:memProf:Time: 0.573s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestGzipTif.test1 437s test1 (fabio.test.codecs.test_tifimage.TestTif_Rect.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testmap1_0002.tif.bz2') 437s INFO:fabio.utils.ExternalResources:Image testmap1_0002.tif.bz2 successfully downloaded. 437s ok 437s INFO:memProf:Time: 0.148s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Rect.test1 437s test1 (fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1) 437s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.tif.bz2') 437s INFO:fabio.utils.ExternalResources:Image a0009.tif.bz2 successfully downloaded. 438s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.edf.bz2') 438s INFO:fabio.utils.ExternalResources:Image a0009.edf.bz2 successfully downloaded. 439s WARNING:fabio.TiffIO:Non standard TIFF. Rows per strip TAG missing 439s WARNING:fabio.TiffIO:Non standard TIFF. Strip byte counts TAG missing 439s ok 439s INFO:memProf:Time: 2.062s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1 439s test1 (fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1) 439s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 439s INFO:fabio.utils.ExternalResources:Image fit2d.tif.bz2 successfully downloaded. 439s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.edf.bz2') 439s INFO:fabio.utils.ExternalResources:Image fit2d.edf.bz2 successfully downloaded. 439s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 439s WARNING:fabio.edfimage:Unknown compression scheme FALSE 439s ok 439s INFO:memProf:Time: 0.288s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1 439s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1) 439s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 439s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.edf.bz2') 439s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.edf.bz2 successfully downloaded. 440s ok 440s INFO:memProf:Time: 0.787s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1 440s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1) 440s Testing pilatus tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.tif.bz2') 441s INFO:fabio.utils.ExternalResources:Image pilatus2M.tif.bz2 successfully downloaded. 451s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.edf.bz2') 452s INFO:fabio.utils.ExternalResources:Image pilatus2M.edf.bz2 successfully downloaded. 463s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 464s ok 464s INFO:memProf:Time: 24.243s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1 464s test_pil (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 464s INFO:fabio.utils.ExternalResources:Image indexed_color.tif.bz2 successfully downloaded. 464s ok 464s INFO:memProf:Time: 0.206s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil 464s test_tiffio (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 464s WARNING:fabio.tifimage:Third dimension is the color 464s WARNING:fabio.tifimage:Third dimension is the color 464s WARNING:fabio.tifimage:Third dimension is the color 464s ok 464s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio 466s test_all_images (fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images) ... INFO:fabio.utils.ExternalResources:Image libtiffpic.tar.gz successfully downloaded. 466s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 466s fd.extractall(output) 466s 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif: no tiff reader managed to read the file. 466s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with TiffIO due to could not broadcast input array from shape (10,640,3) into shape (15,640,3), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with PIL: image file is truncated (1280 bytes not processed) 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Third dimension is the color 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif: no tiff reader managed to read the file. 466s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif: no tiff reader managed to read the file. 466s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/zackthecat.tif with TiffIO due to 273 is not in list, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-08.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 466s WARNING:fabio.tifimage:Third dimension is the color 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 466s WARNING:fabio.tifimage:Third dimension is the color 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ycbcr-cat.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with TiffIO due to Unsupported number of bits for unsigned int: 6, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/fax2d.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with TiffIO due to Unsupported number of bits for unsigned int: 10, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-16.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/strike.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with TiffIO due to Unsupported number of bits for unsigned int: 12, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with TiffIO due to cannot reshape array of size 65536 into shape (800), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with PIL: image file is truncated (126 bytes not processed) 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/text.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s ThunderDecode: Not enough data at scanline 320 (0 != 1512). 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/smallliz.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/g3test.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with TiffIO due to Unsupported number of bits for unsigned int: 14, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/oxford.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-tile.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-lzw.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif: no tiff reader managed to read the file. 466s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/jim___ah.tif with TiffIO due to Unsupported number of bits for unsigned int: 1, trying PIL 466s WARNING:fabio.tifimage:Third dimension is the color 466s WARNING:fabio.tifimage:Third dimension is the color 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Third dimension is the color 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with TiffIO due to Unsupported number of bits for unsigned int: 24, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif: no tiff reader managed to read the file. 466s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ladoga.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-jpeg.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with TiffIO due to cannot reshape array of size 2044 into shape (73,3), trying PIL 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif' mode='rb' closefd=True> 466s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif: no tiff reader managed to read the file. 466s WARNING:fabio.tifimage:Third dimension is the color 466s ok 466s INFO:memProf:Time: 1.288s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images 466s test_invert (fabio.test.codecs.test_xsdimage.TestXSD.test_invert) 466s Tests that 2 matrixes are invert ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 466s INFO:fabio.utils.ExternalResources:Image XSDataImage.edf.bz2 successfully downloaded. 467s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 467s INFO:fabio.utils.ExternalResources:Image XSDataImage.xml.bz2 successfully downloaded. 468s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 469s INFO:fabio.utils.ExternalResources:Image XSDataImageInv.xml.bz2 successfully downloaded. 469s ok 469s INFO:memProf:Time: 3.347s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_invert 469s test_read (fabio.test.codecs.test_xsdimage.TestXSD.test_read) 469s Test reading of XSD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 469s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 469s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 469s INFO:fabio.test.codecs.test_xsdimage:XSDataImage.xml 667.15 667.1489268499176 469s INFO:fabio.test.codecs.test_xsdimage:XSDataImageInv.xml 0.01 0.010599090552568758 469s ok 469s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_read 469s test_same (fabio.test.codecs.test_xsdimage.TestXSD.test_same) 469s test if an image is the same as the EDF equivalent ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 469s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 469s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 469s ok 469s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_same 469s test_memoryleak (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak) 469s This test takes a lot of time, so only in debug mode. ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 470s INFO:fabio.utils.ExternalResources:Image mgzn-20hpt.img.bz2 successfully downloaded. 471s ok 471s INFO:memProf:Time: 1.537s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak 471s test_read (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read) 471s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 472s ok 472s INFO:memProf:Time: 1.092s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read 472s test_read (fabio.test.codecs.test_pnmimage.TestPNM.test_read) 472s check we can read pnm images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 472s INFO:fabio.utils.ExternalResources:Image image0001.pgm.bz2 successfully downloaded. 472s ok 472s INFO:memProf:Time: 0.171s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_read 472s test_write (fabio.test.codecs.test_pnmimage.TestPNM.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 472s ok 472s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_write 472s test_multidim (fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim) ... ok 472s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim 472s test_read (fabio.test.codecs.test_numpyimage.TestNumpy.test_read) 472s check we can read pnm images ... ok 472s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_read 472s test_write (fabio.test.codecs.test_numpyimage.TestNumpy.test_write) 472s check we can write numpy images ... ok 472s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_write 472s test_frame (fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 472s INFO:fabio.utils.ExternalResources:Image lysb_5mg-1.90s_SAXS.bz2 successfully downloaded. 474s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 474s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 475s ok 475s INFO:memProf:Time: 3.007s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame 475s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 475s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 475s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 475s ok 475s INFO:memProf:Time: 0.066s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_header 475s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus.test_read) 475s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 475s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 475s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 475s ok 475s INFO:memProf:Time: 0.073s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_read 475s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 476s INFO:fabio.utils.ExternalResources:Image Pilatus1M.tif.bz2 successfully downloaded. 476s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 476s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 476s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 476s ok 476s INFO:memProf:Time: 0.947s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header 476s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read) 476s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 476s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 476s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 476s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 476s ok 476s INFO:memProf:Time: 0.110s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read 476s test_bug_479 (fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 476s ok 476s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479 476s test_frames_abort_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration) ... ok 476s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration 476s test_frames_full_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration) ... ok 476s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration 476s test_frames_random_access (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access) ... ok 476s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access 476s test_open (fabio.test.codecs.test_eigerimage.TestEiger.test_open) 476s check we can read images from Eiger ... ok 476s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_open 476s test_read (fabio.test.codecs.test_eigerimage.TestEiger.test_read) 476s check we can read images from Eiger ... ok 476s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_read 476s test_write (fabio.test.codecs.test_eigerimage.TestEiger.test_write) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 476s ok 476s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_write 476s test_iterate (fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate) ... ok 476s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate 476s test_next_frames (fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames) 476s check the legacy next API ... ok 476s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames 476s test_open (fabio.test.codecs.test_hdf5image.TestHdf5.test_open) 476s check we can read images from Eiger ... ok 476s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_open 476s test_read (fabio.test.codecs.test_hdf5image.TestHdf5.test_read) 476s check we can read images from Eiger ... ok 476s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_read 476s test_mask (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 476s INFO:fabio.utils.ExternalResources:Image fit2d.f2d.bz2 successfully downloaded. 477s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 477s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.f2d.bz2') 477s INFO:fabio.utils.ExternalResources:Image Pilatus1M.f2d.bz2 successfully downloaded. 481s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf.bz2') 481s INFO:fabio.utils.ExternalResources:Image Pilatus1M.cbf.bz2 successfully downloaded. 481s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.msk.bz2') 482s INFO:fabio.utils.ExternalResources:Image Pilatus1M.msk.bz2 successfully downloaded. 482s ok 482s INFO:memProf:Time: 5.538s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask 482s test_match (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match) 482s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 482s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 482s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 482s ok 482s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match 482s test_read (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read) 482s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 482s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 482s ok 482s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read 482s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2.SPE.bz2') 482s INFO:fabio.utils.ExternalResources:Image v2.SPE.bz2 successfully downloaded. 482s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2_converted.SPE.bz2') 483s INFO:fabio.utils.ExternalResources:Image v2_converted.SPE.bz2 successfully downloaded. 483s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3.spe.bz2') 483s INFO:fabio.utils.ExternalResources:Image v3.spe.bz2 successfully downloaded. 483s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_custom_roi.spe.bz2') 484s INFO:fabio.utils.ExternalResources:Image v3_custom_roi.spe.bz2 successfully downloaded. 484s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_2frames.spe.bz2') 484s INFO:fabio.utils.ExternalResources:Image v3_2frames.spe.bz2 successfully downloaded. 488s test_calibration (fabio.test.codecs.test_speimage.TestSpeImage.test_calibration) ... ok 488s INFO:memProf:Time: 0.023s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_calibration 488s test_center_wavelength (fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength) ... ok 488s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength 488s test_detector (fabio.test.codecs.test_speimage.TestSpeImage.test_detector) ... ok 488s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_detector 488s test_exposure_time (fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time) ... ok 488s INFO:memProf:Time: 0.045s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time 488s test_fabio_integration (fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration) ... ok 488s INFO:memProf:Time: 0.149s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration 488s test_grating (fabio.test.codecs.test_speimage.TestSpeImage.test_grating) ... ok 488s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_grating 488s test_multiple_frames (fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames) ... ok 488s INFO:memProf:Time: 0.031s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames 488s test_read_data (fabio.test.codecs.test_speimage.TestSpeImage.test_read_data) ... ok 488s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_read_data 488s test_reading_version2_spe (fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe) ... ok 488s INFO:memProf:Time: 0.016s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe 488s test_roi (fabio.test.codecs.test_speimage.TestSpeImage.test_roi) ... ok 488s INFO:memProf:Time: 0.022s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_roi 488s test_time (fabio.test.codecs.test_speimage.TestSpeImage.test_time) ... ok 488s INFO:memProf:Time: 0.017s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_time 488s test_read_empty_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file) ... ok 488s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file 488s test_read_failing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 489s INFO:fabio.utils.ExternalResources:Image rand_uint8.jpg.bz2 successfully downloaded. 489s ok 489s INFO:memProf:Time: 0.146s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file 489s test_read_missing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file) ... ok 489s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file 489s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 489s ok 489s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8 489s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 489s ok 489s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8 489s test_with_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 489s ok 489s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil 489s test_without_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 489s ok 489s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil 489s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file) ... ok 489s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file 489s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 489s INFO:fabio.utils.ExternalResources:Image binned_data_uint16.jp2.bz2 successfully downloaded. 489s ok 489s INFO:memProf:Time: 0.230s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16 489s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 489s INFO:fabio.utils.ExternalResources:Image binned_data_uint8.jp2.bz2 successfully downloaded. 489s ok 489s INFO:memProf:Time: 0.215s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8 489s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 489s ok 489s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format 489s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file) ... ok 489s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file 489s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 489s ok 489s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16 489s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 489s ok 489s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8 489s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 489s ok 489s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format 489s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file) ... skipped 'glymur is not available or too old' 489s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file 489s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16) ... skipped 'glymur is not available or too old' 489s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16 489s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8) ... skipped 'glymur is not available or too old' 489s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8 489s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format) ... skipped 'glymur is not available or too old' 489s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format 489s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file) ... ok 489s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file 489s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 489s ok 489s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16 489s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 489s ok 489s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8 489s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format) ... /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 489s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 489s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.bz2 rb 489s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.bz2 rb 489s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 489s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 489s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 489s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 489s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.bz2 rb 489s /tmp/fabio_testdata_ubuntu/fit2d.tif.bz2 rb 489s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.bz2 rb 489s /tmp/fabio_testdata_ubuntu/pilatus2M.tif.bz2 rb 489s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 489s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 489s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 489s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 489s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 489s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 489s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 489s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 489s 0 489s 1 489s 2 489s 3 489s 4 489s 5 489s 6 489s 7 489s 8 489s 9 489s 10 489s 11 489s 12 489s 13 489s 14 489s 15 489s 16 489s 17 489s 18 489s 19 489s 20 489s 21 489s 22 489s 23 489s 24 489s 25 489s 26 489s 27 489s 28 489s 29 489s 30 489s 31 489s 32 489s 33 489s 34 489s 35 489s 36 489s 37 489s 38 489s 39 489s 40 489s 41 489s 42 489s 43 489s 44 489s 45 489s 46 489s 47 489s 48 489s 49 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: 489s jpeg2kimage.PIL: INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 489s ok 489s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format 489s test_read (fabio.test.codecs.test_mpaimage.TestMpa.test_read) 489s Test the reading of multiwire images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mpa_test.mpa.bz2') 489s INFO:fabio.utils.ExternalResources:Image mpa_test.mpa.bz2 successfully downloaded. 493s ok 493s INFO:memProf:Time: 4.148s RAM: 0.000 Mb fabio.test.codecs.test_mpaimage.TestMpa.test_read 493s test_read (fabio.test.codecs.test_dm3image.TestDm3Image.test_read) 493s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref_d20x_310mm.dm3.bz2') 495s INFO:fabio.utils.ExternalResources:Image ref_d20x_310mm.dm3.bz2 successfully downloaded. 502s ok 502s INFO:memProf:Time: 8.334s RAM: 0.000 Mb fabio.test.codecs.test_dm3image.TestDm3Image.test_read 502s test_read (fabio.test.codecs.test_mrcimage.TestMrc.test_read) 502s check we can read mrc images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 502s INFO:fabio.utils.ExternalResources:Image EMD-3001.map.bz2 successfully downloaded. 502s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 503s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.mrc.bz2 successfully downloaded. 526s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 527s INFO:fabio.utils.ExternalResources:Image EMD-3001.npy.bz2 successfully downloaded. 527s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 527s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.npy.bz2 successfully downloaded. 552s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got ok 552s INFO:memProf:Time: 50.821s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_read 552s test_same (fabio.test.codecs.test_mrcimage.TestMrc.test_same) 552s see if we can read mrc images and if they are the same as the numpy dump ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 552s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 552s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 552s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 552s INFO:fabio.test.codecs.test_mrcimage:Comparing files EMD-3001.map and EMD-3001.npy 552s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.test.codecs.test_mrcimage:Comparing files 0p67_5s_0000.mrc and 0p67_5s_0000.npy 552s ok 552s INFO:memProf:Time: 0.016s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_same 552s test_file_series (fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series) ... ok 552s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series 552s test_frames_abort_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration) ... ok 552s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration 552s test_frames_full_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration) ... ok 552s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration 552s test_frames_random_access (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access) ... ok 552s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access 552s test_multi_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame) ... ok 552s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame 552s test_single_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame) ... ok 552s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame 552s test_data (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data) ... INFO:fabio.esperantoimage:Esperanto accepts only integer data, rounding 552s INFO:fabio.esperantoimage:Padding image to be square, multiple of 4 and of size between 256 and 4096 552s ok 552s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data 552s test_header (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 553s INFO:fabio.utils.ExternalResources:Image sucrose_1s__1_1.esperanto.bz2 successfully downloaded. 555s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_4g_9e92__ubuntu/4bytes_long.esperanto 555s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_4g_9e92__ubuntu/agi_bitfield.esperanto 557s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 557s INFO:fabio.utils.ExternalResources:Image reference.esperanto.bz2 successfully downloaded. 557s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_4g_9e92__ubuntu/4bytes_long.esperanto 557s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_4g_9e92__ubuntu/agi_bitfield.esperanto 557s ok 557s INFO:memProf:Time: 4.455s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header 557s test_read (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read) 557s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 558s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 558s ok 558s INFO:memProf:Time: 1.638s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read 558s test_values (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 559s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.npy.bz2') 559s INFO:fabio.utils.ExternalResources:Image reference.npy.bz2 successfully downloaded. 559s ok 559s INFO:memProf:Time: 0.557s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values 559s test_frames_abort_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration) ... ok 559s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration 559s test_frames_full_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration) ... ok 559s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration 559s test_frames_random_access (fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access) ... ok 559s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access 559s test_identify (fabio.test.codecs.test_limaimage.TestLima.test_identify) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('output_sparse_0_00000.h5') 560s INFO:fabio.utils.ExternalResources:Image output_sparse_0_00000.h5.bz2 successfully downloaded. 562s ok 562s INFO:memProf:Time: 3.082s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_identify 562s test_open (fabio.test.codecs.test_limaimage.TestLima.test_open) 562s test_open check we can read images from Lima ... ok 562s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_open 562s test_read (fabio.test.codecs.test_limaimage.TestLima.test_read) 562s test_read check we can read images from Lima ... ok 562s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_read 562s test_write (fabio.test.codecs.test_limaimage.TestLima.test_write) ... WARNING:fabio.limaimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 562s ok 562s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_write 562s test_read (fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read) 562s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Radiograph_SP8_BL47XU_HiPicimage.img.bz2') 564s INFO:fabio.utils.ExternalResources:Image Radiograph_SP8_BL47XU_HiPicimage.img.bz2 successfully downloaded. 567s ok 567s INFO:memProf:Time: 4.595s RAM: 0.000 Mb fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read 567s test_read (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read) 567s check we can read images from Eiger ... ok 567s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read 567s test_write (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write) ... ok 567s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write 567s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0001.ccd') 567s INFO:fabio.utils.ExternalResources:Image scan0001.ccd.bz2 successfully downloaded. 567s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0005.ccd') 567s INFO:fabio.utils.ExternalResources:Image scan0005.ccd.bz2 successfully downloaded. 567s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0050.ccd') 567s INFO:fabio.utils.ExternalResources:Image scan0050.ccd.bz2 successfully downloaded. 567s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0059.ccd') 567s INFO:fabio.utils.ExternalResources:Image scan0059.ccd.bz2 successfully downloaded. 567s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0066.ccd') 568s INFO:fabio.utils.ExternalResources:Image scan0066.ccd.bz2 successfully downloaded. 568s test_parse (fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse) ... ok 568s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse 568s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf') 568s test_decomposition (fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition) ... WARNING:fabio.test.codecs.test_xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 568s WARNING:fabio.xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 568s ok 568s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition 568s test_compress_decode_field_overflow (fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow) ... ok 568s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow 568s test_compress_decompress_field_small (fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small) ... ok 568s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small 568s test_full_compress_decompress_field (fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field) ... ok 568s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field 568s test_get_fieldsize (fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize) ... ok 568s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize 568s test_mask_conv (fabio.test.test_agi_bitfield.TestUtil.test_mask_conv) ... ok 568s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_mask_conv 568s test_compress_row_small (fabio.test.test_agi_bitfield.TestRow.test_compress_row_small) ... ok 568s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_small 568s test_compress_row_zero (fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero) ... ok 568s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero 568s test_full_rand (fabio.test.test_agi_bitfield.TestCompression.test_full_rand) ... ok 568s INFO:memProf:Time: 0.067s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestCompression.test_full_rand 568s test_cython (fabio.test.test_densification.TestDensification.test_cython) ... ok 568s INFO:memProf:Time: 0.090s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_cython 568s test_rng_normal (fabio.test.test_densification.TestDensification.test_rng_normal) ... ok 568s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_normal 568s test_rng_uniform (fabio.test.test_densification.TestDensification.test_rng_uniform) ... ok 568s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_uniform 568s setUpClass (fabio.test.test_io_limits.TestEdf) ... skipped 'test requires debug level logging' 568s setUpClass (fabio.test.test_io_limits.TestTiff) ... skipped 'test requires debug level logging' 568s test_coverage (fabio.test.test_utils_cli.TestUtilShell.test_coverage) 568s test function coverage 568s /tmp/fabio_4g_9e92__ubuntu/lima3d.h5 568s /tmp/fabio_4g_9e92__ubuntu/binary.npy 568s speed-up: 22.004467322194838 568s ##### 0 568s ##### 1 568s ##### 2 568s ##### 3 568s ##### 4 568s ##### 5 568s ##### 6 568s ##### 7 568s aaa [ ] 7% toto aaa [■■■■■■ ] 70% toto aaa [■■■■■■■■■■] 132% toto ... ok 568s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_coverage 568s test_expand_args (fabio.test.test_utils_cli.TestUtilShell.test_expand_args) ... ok 568s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_expand_args 568s 568s ---------------------------------------------------------------------- 568s Ran 356 tests in 357.366s 568s 568s OK (skipped=7) 568s autopkgtest [02:49:47]: test command1: -----------------------] 569s autopkgtest [02:49:48]: test command1: - - - - - - - - - - results - - - - - - - - - - 569s command1 PASS 569s autopkgtest [02:49:48]: @@@@@@@@@@@@@@@@@@@@ summary 569s command1 PASS 582s nova [W] Skipping flock in bos03-arm64 582s Creating nova instance adt-plucky-arm64-python-fabio-20241115-024018-juju-7f2275-prod-proposed-migration-environment-15-f63ec36b-801e-43cf-9045-99b743eb381e from image adt/ubuntu-plucky-arm64-server-20241114.img (UUID 4472f5f7-859f-4441-9e8e-9550fb35f210)...