0s autopkgtest [02:37:08]: starting date and time: 2024-11-15 02:37:08+0000
  0s autopkgtest [02:37:08]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky
  0s autopkgtest [02:37:08]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.6hp5u6b4/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:matplotlib --apt-upgrade pymatgen --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=matplotlib/3.8.3-3ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-14.secgroup --name adt-plucky-arm64-pymatgen-20241115-023707-juju-7f2275-prod-proposed-migration-environment-15-6238ebf4-f511-4ce2-ba11-0367d211517a --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 76s autopkgtest [02:38:24]: testbed dpkg architecture: arm64
 76s autopkgtest [02:38:24]: testbed apt version: 2.9.8
 76s autopkgtest [02:38:24]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 77s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
 77s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1030 kB]
 78s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB]
 78s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B]
 78s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB]
 78s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [164 kB]
 78s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB]
 78s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [773 kB]
 78s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [6116 B]
 78s Fetched 2221 kB in 1s (2445 kB/s)
 78s Reading package lists...
 81s Reading package lists...
 81s Building dependency tree...
 81s Reading state information...
 82s Calculating upgrade...
 83s The following packages will be upgraded:
 83s   firmware-sof-signed libcap-ng0 libexpat1 lxd-installer man-db pastebinit
 83s   python3-systemd xfsprogs
 84s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 84s Need to get 9481 kB of archives.
 84s After this operation, 549 kB of additional disk space will be used.
 84s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 firmware-sof-signed all 2024.06-1ubuntu2 [7083 kB]
 84s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libcap-ng0 arm64 0.8.5-3build1 [15.0 kB]
 84s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libexpat1 arm64 2.6.4-1 [76.6 kB]
 84s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 man-db arm64 2.13.0-1 [1320 kB]
 84s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 lxd-installer all 9 [5084 B]
 84s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 pastebinit all 1.7.1-1 [14.9 kB]
 84s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-systemd arm64 235-1build5 [46.7 kB]
 84s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 xfsprogs arm64 6.8.0-2.2ubuntu2 [919 kB]
 85s Preconfiguring packages ...
 85s Fetched 9481 kB in 1s (10.2 MB/s)
 85s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 79925 files and directories currently installed.)
 85s Preparing to unpack .../firmware-sof-signed_2024.06-1ubuntu2_all.deb ...
 85s Unpacking firmware-sof-signed (2024.06-1ubuntu2) over (2024.06-1ubuntu1) ...
 86s Preparing to unpack .../libcap-ng0_0.8.5-3build1_arm64.deb ...
 86s Unpacking libcap-ng0:arm64 (0.8.5-3build1) over (0.8.5-1) ...
 86s Setting up libcap-ng0:arm64 (0.8.5-3build1) ...
 86s (Reading database ... 
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(Reading database ... 75%
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 79951 files and directories currently installed.)
 86s Preparing to unpack .../0-libexpat1_2.6.4-1_arm64.deb ...
 86s Unpacking libexpat1:arm64 (2.6.4-1) over (2.6.2-2) ...
 86s Preparing to unpack .../1-man-db_2.13.0-1_arm64.deb ...
 86s Unpacking man-db (2.13.0-1) over (2.12.1-3) ...
 86s Preparing to unpack .../2-lxd-installer_9_all.deb ...
 86s Unpacking lxd-installer (9) over (8) ...
 86s Preparing to unpack .../3-pastebinit_1.7.1-1_all.deb ...
 86s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ...
 86s Preparing to unpack .../4-python3-systemd_235-1build5_arm64.deb ...
 86s Unpacking python3-systemd (235-1build5) over (235-1build4) ...
 87s Preparing to unpack .../5-xfsprogs_6.8.0-2.2ubuntu2_arm64.deb ...
 87s Unpacking xfsprogs (6.8.0-2.2ubuntu2) over (6.8.0-2.2ubuntu1) ...
 87s Setting up libexpat1:arm64 (2.6.4-1) ...
 87s Setting up firmware-sof-signed (2024.06-1ubuntu2) ...
 87s Setting up pastebinit (1.7.1-1) ...
 87s Setting up man-db (2.13.0-1) ...
 87s Updating database of manual pages ...
 89s man-db.service is a disabled or a static unit not running, not starting it.
 89s Setting up xfsprogs (6.8.0-2.2ubuntu2) ...
 89s update-initramfs: deferring update (trigger activated)
 90s Setting up lxd-installer (9) ...
 90s Setting up python3-systemd (235-1build5) ...
 91s Processing triggers for libc-bin (2.40-1ubuntu3) ...
 91s Processing triggers for initramfs-tools (0.142ubuntu34) ...
 91s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
 91s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
114s System running in EFI mode, skipping.
114s Reading package lists...
115s Building dependency tree...
115s Reading state information...
115s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
116s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
116s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
116s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
116s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
117s Reading package lists...
117s Reading package lists...
118s Building dependency tree...
118s Reading state information...
118s Calculating upgrade...
119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
119s Reading package lists...
119s Building dependency tree...
119s Reading state information...
120s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
120s autopkgtest [02:39:08]: rebooting testbed after setup commands that affected boot
124s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
147s autopkgtest [02:39:35]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024
150s autopkgtest [02:39:38]: @@@@@@@@@@@@@@@@@@@@ apt-source pymatgen
154s Get:1 http://ftpmaster.internal/ubuntu plucky/universe pymatgen 2024.6.10+dfsg1-8 (dsc) [3226 B]
154s Get:2 http://ftpmaster.internal/ubuntu plucky/universe pymatgen 2024.6.10+dfsg1-8 (tar) [9800 kB]
154s Get:3 http://ftpmaster.internal/ubuntu plucky/universe pymatgen 2024.6.10+dfsg1-8 (diff) [15.5 kB]
154s gpgv: Signature made Sun Aug 11 23:57:56 2024 UTC
154s gpgv:                using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA
154s gpgv:                issuer "dparsons@debian.org"
154s gpgv: Can't check signature: No public key
154s dpkg-source: warning: cannot verify inline signature for ./pymatgen_2024.6.10+dfsg1-8.dsc: no acceptable signature found
155s autopkgtest [02:39:43]: testing package pymatgen version 2024.6.10+dfsg1-8
155s autopkgtest [02:39:43]: build not needed
163s autopkgtest [02:39:51]: test test-pymatgen: preparing testbed
167s Reading package lists...
168s Building dependency tree...
168s Reading state information...
168s Starting pkgProblemResolver with broken count: 0
168s Starting 2 pkgProblemResolver with broken count: 0
168s Done
170s The following additional packages will be installed:
170s   autoconf automake autopoint autotools-dev blt build-essential cpp cpp-14
170s   cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 debhelper debugedit
170s   dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz
170s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
170s   fonts-font-awesome fonts-glyphicons-halflings fonts-lato fonts-lyx
170s   fonts-mathjax g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
170s   gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gettext
170s   intltool-debian libaec0 libamd-comgr2 libamdhip64-5 libarchive-zip-perl
170s   libasan8 libblas3 libboost-iostreams1.83.0 libcairo2 libcc1-0
170s   libdebhelper-perl libdeflate0 libdouble-conversion3 libdrm-amdgpu1
170s   libdrm-radeon1 libegl-mesa0 libegl1 libevent-pthreads-2.1-7t64 libexpat1-dev
170s   libfabric1 libfile-stripnondeterminism-perl libfontconfig1 libgbm1
170s   libgcc-14-dev libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 libglapi-mesa
170s   libglew2.2 libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3
170s   libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libhsa-runtime64-1
170s   libhsakmt1 libhwasan0 libhwloc-plugins libhwloc15 libibmad5 libibumad3
170s   libice6 libimagequant0 libinchi1 libinput-bin libinput10 libisl23 libitm1
170s   libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery
170s   libjs-jquery-ui libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-perl
170s   libjsoncpp25 liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libllvm17t64 liblsan0
170s   liblzf1 libmaeparser1 libmd4c0 libmpc3 libmtdev1t64 libmunge2 libnetcdf19t64
170s   libogg0 libopenbabel7 libopengl0 libopenjp2-7 libopenmpi3t64 libpciaccess0
170s   libpcre2-16-0 libpixman-1-0 libpmix2t64 libproj25 libpython3-all-dev
170s   libpython3-dev libpython3.12-dev libqhull-r8.0 libqt5core5t64 libqt5dbus5t64
170s   libqt5gui5t64 libqt5network5t64 libqt5widgets5t64 libraqm0 librdmacm1t64
170s   libsharpyuv0 libsm6 libstdc++-14-dev libsymspg2 libsz2 libtbb12
170s   libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtheora0 libtiff6 libtk8.6 libtool
170s   libtsan2 libubsan1 libucx0 libvtk9.3 libvtk9.3-qt libvulkan1 libwacom-common
170s   libwacom9 libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2
170s   libwebpmux3 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
170s   libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0
170s   libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1
170s   libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1
170s   libxfixes3 libxft2 libxkbcommon-x11-0 libxnvctrl0 libxrender1 libxshmfence1
170s   libxslt1.1 libxss1 libxxf86vm1 m4 mesa-libgallium mpi-default-bin
170s   ocl-icd-libopencl1 openmpi-bin openmpi-common packmol po-debconf proj-data
170s   pybuild-plugin-pyproject pymatgen-test-files python-matplotlib-data
170s   python-pymatgen-doc python3-alabaster python3-all python3-all-dev
170s   python3-annotated-types python3-appdirs python3-ase python3-brotli
170s   python3-bs4 python3-bson python3-build python3-cftime python3-contourpy
170s   python3-cycler python3-dateutil python3-decorator python3-defusedxml
170s   python3-dev python3-dnspython python3-docutils python3-dotenv
170s   python3-email-validator python3-emmet-core python3-fastjsonschema
170s   python3-fonttools python3-frozendict python3-fs python3-h5py
170s   python3-h5py-serial python3-imagesize python3-iniconfig python3-installer
170s   python3-joblib python3-jupyter-core python3-kiwisolver python3-latexcodec
170s   python3-lxml python3-lz4 python3-matplotlib python3-monty python3-mpi4py
170s   python3-mpmath python3-nbformat python3-netcdf4 python3-networkx
170s   python3-numpy python3-openbabel python3-packaging python3-palettable
170s   python3-pandas python3-pandas-lib python3-phonopy python3-pil
170s   python3-pil.imagetk python3-platformdirs python3-plotly python3-pluggy
170s   python3-pybtex python3-pydantic python3-pydantic-core
170s   python3-pydantic-settings python3-pymatgen python3-pyproject-hooks
170s   python3-pytest python3-roman python3-ruamel.yaml python3-ruamel.yaml.clib
170s   python3-scipy python3-six python3-snowballstemmer python3-soupsieve
170s   python3-spglib python3-sphinx python3-sphinx-rtd-theme
170s   python3-sphinxcontrib.jquery python3-sympy python3-tabulate python3-tenacity
170s   python3-tk python3-toml python3-tqdm python3-traitlets python3-tz
170s   python3-ufolib2 python3-uncertainties python3-unicodedata2 python3-vtk9
170s   python3-wheel python3.12-dev python3.12-tk sgml-base sphinx-common
170s   sphinx-rtd-theme-common tk8.6-blt2.5 unicode-data x11-common xml-core
170s   zlib1g-dev
170s Suggested packages:
170s   autoconf-archive gnu-standards autoconf-doc blt-demo cpp-doc gcc-14-locales
170s   cpp-14-doc cython-doc dh-make flit gcc-14-doc gcc-multilib manpages-dev flex
170s   bison gdb gcc-doc gdb-aarch64-linux-gnu gettext-doc libasprintf-dev
170s   libgettextpo-dev glew-utils libjs-jquery-ui-docs fonts-mathjax-extras
170s   fonts-stix libjs-mathjax-doc liblcms2-utils proj-bin libthai0
170s   qgnomeplatform-qt5 qt5-image-formats-plugins libstdc++-14-doc tcl8.6 tk8.6
170s   libtool-doc gfortran | fortran95-compiler gcj-jdk vtk9-doc vtk9-examples
170s   libwacom-bin m4-doc opencl-icd gfortran | fortran-compiler libmail-box-perl
170s   python-ase-doc python3-pycodcif python3-pip python3-venv python-build-doc
170s   python-cycler-doc python3-trio python3-aioquic python3-h2 python3-httpx
170s   python3-httpcore docutils-doc fonts-linuxlibertine | ttf-linux-libertine
170s   texlive-lang-french texlive-latex-base texlive-latex-recommended
170s   python-fastjsonschema-doc python-h5py-doc python-installer-doc
170s   python-joblib-doc python-latexcodec-doc python-lxml-doc cm-super-minimal
170s   dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3
170s   librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi-cairo
170s   python3-gobject python3-pyqt5 python3-sip python3-tornado
170s   texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2
170s   python3-gdal python3-pydot python3-pygraphviz gfortran python-numpy-doc
170s   python-pandas-doc python3-statsmodels python-pil-doc python3-ipykernel
170s   python-pybtex-doc python3-mp-api python-scipy-doc python3-stemmer dvisvgm
170s   fonts-freefont-otf imagemagick-6.q16 latexmk sphinx-doc tex-gyre
170s   texlive-fonts-extra texlive-fonts-recommended texlive-plain-generic
170s   python-sympy-doc python-tenacity-doc tix python3-tk-dbg python3.13-tk
170s   python-traitlets-doc python-uncertainties-doc mayavi2 sgml-base-doc
170s Recommended packages:
170s   libarchive-cpio-perl libgl1-amber-dri javascript-common libjson-xs-perl
170s   qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme qtwayland5 libltdl-dev
170s   mesa-vulkan-drivers | vulkan-icd tcl libmail-sendmail-perl python3-bson-ext
170s   libpaper-utils python3-simplejson python3-psutil python3-cssselect
170s   python3-html5lib python-monty-doc python3-torch python3-bottleneck
170s   python3-numexpr python3-odf python3-openpyxl python3-tables python3-olefile
170s   python3-tomli isympy-common
170s The following NEW packages will be installed:
170s   autoconf automake autopkgtest-satdep autopoint autotools-dev blt
170s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
170s   cython3 debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism
170s   docutils-common dwz fontconfig fontconfig-config fonts-dejavu-core
170s   fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings fonts-lato
170s   fonts-lyx fonts-mathjax g++ g++-14 g++-14-aarch64-linux-gnu
170s   g++-aarch64-linux-gnu gcc gcc-14 gcc-14-aarch64-linux-gnu
170s   gcc-aarch64-linux-gnu gettext intltool-debian libaec0 libamd-comgr2
170s   libamdhip64-5 libarchive-zip-perl libasan8 libblas3 libboost-iostreams1.83.0
170s   libcairo2 libcc1-0 libdebhelper-perl libdeflate0 libdouble-conversion3
170s   libdrm-amdgpu1 libdrm-radeon1 libegl-mesa0 libegl1
170s   libevent-pthreads-2.1-7t64 libexpat1-dev libfabric1
170s   libfile-stripnondeterminism-perl libfontconfig1 libgbm1 libgcc-14-dev
170s   libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libglew2.2
170s   libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b
170s   libhdf5-103-1t64 libhdf5-hl-100t64 libhsa-runtime64-1 libhsakmt1 libhwasan0
170s   libhwloc-plugins libhwloc15 libibmad5 libibumad3 libice6 libimagequant0
170s   libinchi1 libinput-bin libinput10 libisl23 libitm1 libjbig0 libjpeg-turbo8
170s   libjpeg8 libjs-bootstrap libjs-jquery libjs-jquery-ui libjs-mathjax
170s   libjs-sphinxdoc libjs-underscore libjson-perl libjsoncpp25 liblapack3
170s   liblbfgsb0 liblcms2-2 liblerc4 libllvm17t64 liblsan0 liblzf1 libmaeparser1
170s   libmd4c0 libmpc3 libmtdev1t64 libmunge2 libnetcdf19t64 libogg0 libopenbabel7
170s   libopengl0 libopenjp2-7 libopenmpi3t64 libpciaccess0 libpcre2-16-0
170s   libpixman-1-0 libpmix2t64 libproj25 libpython3-all-dev libpython3-dev
170s   libpython3.12-dev libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5gui5t64
170s   libqt5network5t64 libqt5widgets5t64 libraqm0 librdmacm1t64 libsharpyuv0
170s   libsm6 libstdc++-14-dev libsymspg2 libsz2 libtbb12 libtbbbind-2-5
170s   libtbbmalloc2 libtcl8.6 libtheora0 libtiff6 libtk8.6 libtool libtsan2
170s   libubsan1 libucx0 libvtk9.3 libvtk9.3-qt libvulkan1 libwacom-common
170s   libwacom9 libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2
170s   libwebpmux3 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
170s   libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0
170s   libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1
170s   libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1
170s   libxfixes3 libxft2 libxkbcommon-x11-0 libxnvctrl0 libxrender1 libxshmfence1
170s   libxslt1.1 libxss1 libxxf86vm1 m4 mesa-libgallium mpi-default-bin
170s   ocl-icd-libopencl1 openmpi-bin openmpi-common packmol po-debconf proj-data
170s   pybuild-plugin-pyproject pymatgen-test-files python-matplotlib-data
170s   python-pymatgen-doc python3-alabaster python3-all python3-all-dev
170s   python3-annotated-types python3-appdirs python3-ase python3-brotli
170s   python3-bs4 python3-bson python3-build python3-cftime python3-contourpy
170s   python3-cycler python3-dateutil python3-decorator python3-defusedxml
170s   python3-dev python3-dnspython python3-docutils python3-dotenv
170s   python3-email-validator python3-emmet-core python3-fastjsonschema
170s   python3-fonttools python3-frozendict python3-fs python3-h5py
170s   python3-h5py-serial python3-imagesize python3-iniconfig python3-installer
170s   python3-joblib python3-jupyter-core python3-kiwisolver python3-latexcodec
170s   python3-lxml python3-lz4 python3-matplotlib python3-monty python3-mpi4py
170s   python3-mpmath python3-nbformat python3-netcdf4 python3-networkx
170s   python3-numpy python3-openbabel python3-packaging python3-palettable
170s   python3-pandas python3-pandas-lib python3-phonopy python3-pil
170s   python3-pil.imagetk python3-platformdirs python3-plotly python3-pluggy
170s   python3-pybtex python3-pydantic python3-pydantic-core
170s   python3-pydantic-settings python3-pymatgen python3-pyproject-hooks
170s   python3-pytest python3-roman python3-ruamel.yaml python3-ruamel.yaml.clib
170s   python3-scipy python3-six python3-snowballstemmer python3-soupsieve
170s   python3-spglib python3-sphinx python3-sphinx-rtd-theme
170s   python3-sphinxcontrib.jquery python3-sympy python3-tabulate python3-tenacity
170s   python3-tk python3-toml python3-tqdm python3-traitlets python3-tz
170s   python3-ufolib2 python3-uncertainties python3-unicodedata2 python3-vtk9
170s   python3-wheel python3.12-dev python3.12-tk sgml-base sphinx-common
170s   sphinx-rtd-theme-common tk8.6-blt2.5 unicode-data x11-common xml-core
170s   zlib1g-dev
170s 0 upgraded, 298 newly installed, 0 to remove and 0 not upgraded.
170s Need to get 516 MB/516 MB of archives.
170s After this operation, 1998 MB of additional disk space will be used.
170s Get:1 /tmp/autopkgtest.9Td4bJ/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [1136 B]
170s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-lato all 2.015-1 [2781 kB]
171s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 sgml-base all 1.31 [11.4 kB]
171s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 m4 arm64 1.4.19-4build1 [240 kB]
171s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 autoconf all 2.72-3 [382 kB]
171s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 autotools-dev all 20220109.1 [44.9 kB]
171s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 automake all 1:1.16.5-1.3ubuntu1 [558 kB]
171s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 autopoint all 0.22.5-2 [616 kB]
171s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [987 kB]
171s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
171s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
171s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB]
171s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB]
171s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
171s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
171s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
171s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
171s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.15-1 [774 kB]
171s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7build1 [618 kB]
171s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 blt arm64 2.5.3+dfsg-7build1 [4840 B]
171s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
171s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
171s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [10.6 MB]
171s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-8ubuntu1 [1028 B]
171s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B]
171s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB]
171s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-8ubuntu1 [49.7 kB]
171s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB]
171s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-8ubuntu1 [27.8 kB]
171s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-8ubuntu1 [2893 kB]
171s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-8ubuntu1 [1283 kB]
171s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-8ubuntu1 [2686 kB]
172s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-8ubuntu1 [1151 kB]
172s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-8ubuntu1 [1598 kB]
172s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-8ubuntu1 [2594 kB]
172s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [20.9 MB]
172s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-8ubuntu1 [518 kB]
172s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B]
172s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B]
172s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-8ubuntu1 [2476 kB]
172s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [12.1 MB]
173s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-8ubuntu1 [19.9 kB]
173s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B]
173s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B]
173s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
173s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 cython3 arm64 3.0.11+dfsg-1ubuntu2 [2977 kB]
173s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libdebhelper-perl all 13.20ubuntu1 [94.2 kB]
173s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libtool all 2.4.7-7build1 [166 kB]
173s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 dh-autoreconf all 20 [16.1 kB]
173s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB]
173s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB]
173s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 dh-strip-nondeterminism all 1.14.0-1 [5058 B]
173s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 debugedit arm64 1:5.1-1 [45.9 kB]
173s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 dwz arm64 0.15-1build6 [113 kB]
173s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 gettext arm64 0.22.5-2 [930 kB]
173s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 intltool-debian all 0.35.0+20060710.6 [23.2 kB]
173s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 po-debconf all 1.0.21+nmu1 [233 kB]
173s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 debhelper all 13.20ubuntu1 [893 kB]
173s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 dh-python all 6.20241024 [112 kB]
173s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 xml-core all 0.19 [20.3 kB]
173s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 docutils-common all 0.21.2+dfsg-2 [131 kB]
173s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB]
173s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
173s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
173s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-lyx all 2.4.2.1-1 [171 kB]
173s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
173s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB]
173s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 libllvm17t64 arm64 1:17.0.6-18 [24.9 MB]
173s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB]
174s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [20.9 kB]
174s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB]
174s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB]
174s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamdhip64-5 arm64 5.7.1-5 [9704 kB]
174s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB]
174s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost-iostreams1.83.0 arm64 1.83.0-3.2ubuntu2 [259 kB]
174s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
174s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
174s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
174s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
174s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB]
174s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdouble-conversion3 arm64 3.3.0-1build1 [38.0 kB]
174s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.123-1 [20.8 kB]
174s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB]
174s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB]
174s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB]
174s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.10-2 [8020 B]
174s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B]
174s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B]
174s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B]
174s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B]
174s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB]
174s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B]
174s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB]
174s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB]
174s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB]
174s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libegl-mesa0 arm64 24.2.3-1ubuntu1 [129 kB]
174s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B]
174s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 libexpat1-dev arm64 2.6.4-1 [129 kB]
174s Get:99 http://ftpmaster.internal/ubuntu plucky/main arm64 librdmacm1t64 arm64 52.0-2ubuntu1 [71.5 kB]
174s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfabric1 arm64 1.17.0-3ubuntu1 [542 kB]
174s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB]
174s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.296.0-1 [153 kB]
175s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB]
175s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB]
175s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB]
175s Get:106 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB]
175s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B]
175s Get:108 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB]
175s Get:109 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB]
175s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB]
175s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgl2ps1.4 arm64 1.4.2+dfsg1-2build1 [40.6 kB]
175s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 libglew2.2 arm64 2.2.0-4build1 [191 kB]
175s Get:113 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
175s Get:114 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.0.1-1 [487 kB]
175s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B]
175s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB]
175s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB]
175s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc15 arm64 2.11.2-1 [162 kB]
175s Get:119 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
175s Get:120 http://ftpmaster.internal/ubuntu plucky/main arm64 libimagequant0 arm64 2.18.0-1build1 [37.1 kB]
175s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 libinchi1 arm64 1.03+dfsg-4build1 [451 kB]
175s Get:122 http://ftpmaster.internal/ubuntu plucky/main arm64 libwacom-common all 2.13.0-1 [98.6 kB]
175s Get:123 http://ftpmaster.internal/ubuntu plucky/main arm64 libwacom9 arm64 2.13.0-1 [25.2 kB]
175s Get:124 http://ftpmaster.internal/ubuntu plucky/main arm64 libinput-bin arm64 1.26.2-1 [22.8 kB]
175s Get:125 http://ftpmaster.internal/ubuntu plucky/main arm64 libmtdev1t64 arm64 1.1.6-1.2 [14.4 kB]
175s Get:126 http://ftpmaster.internal/ubuntu plucky/main arm64 libinput10 arm64 1.26.2-1 [132 kB]
175s Get:127 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB]
175s Get:128 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
175s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
175s Get:130 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
175s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
175s Get:132 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB]
175s Get:133 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-sphinxdoc all 7.4.7-4 [158 kB]
175s Get:134 http://ftpmaster.internal/ubuntu plucky/main arm64 libjson-perl all 4.10000-1 [81.9 kB]
175s Get:135 http://ftpmaster.internal/ubuntu plucky/main arm64 libjsoncpp25 arm64 1.9.5-6build1 [78.2 kB]
175s Get:136 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB]
175s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB]
175s Get:138 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB]
175s Get:139 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB]
175s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B]
175s Get:141 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaeparser1 arm64 1.3.1-1build1 [84.5 kB]
175s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmd4c0 arm64 0.5.2-2 [42.4 kB]
175s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnetcdf19t64 arm64 1:4.9.2-6ubuntu1 [466 kB]
176s Get:144 http://ftpmaster.internal/ubuntu plucky/main arm64 libogg0 arm64 1.3.5-3build1 [22.6 kB]
176s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 libopenbabel7 arm64 3.1.1+dfsg-11ubuntu1 [3178 kB]
176s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmunge2 arm64 0.5.15-4build1 [14.9 kB]
176s Get:147 http://ftpmaster.internal/ubuntu plucky/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB]
176s Get:148 http://ftpmaster.internal/ubuntu plucky/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB]
176s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB]
176s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc-plugins arm64 2.11.2-1 [15.8 kB]
176s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpmix2t64 arm64 5.0.3-2 [662 kB]
176s Get:152 http://ftpmaster.internal/ubuntu plucky/main arm64 libibumad3 arm64 52.0-2ubuntu1 [29.3 kB]
176s Get:153 http://ftpmaster.internal/ubuntu plucky/main arm64 libibmad5 arm64 52.0-2ubuntu1 [43.1 kB]
176s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 libucx0 arm64 1.17.0+ds-3build1 [1093 kB]
176s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 libopenmpi3t64 arm64 4.1.6-13.3ubuntu2 [2487 kB]
176s Get:156 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB]
176s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 proj-data all 9.5.0-1 [7919 kB]
176s Get:158 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
176s Get:159 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB]
176s Get:160 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB]
176s Get:161 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
176s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 libproj25 arm64 9.5.0-1 [1339 kB]
176s Get:163 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
176s Get:164 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.12-dev arm64 3.12.7-3 [5565 kB]
177s Get:165 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3-dev arm64 3.12.6-0ubuntu1 [10.2 kB]
177s Get:166 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3-all-dev arm64 3.12.6-0ubuntu1 [916 B]
177s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB]
177s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5core5t64 arm64 5.15.15+dfsg-1ubuntu1 [1997 kB]
177s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5dbus5t64 arm64 5.15.15+dfsg-1ubuntu1 [221 kB]
177s Get:170 http://ftpmaster.internal/ubuntu plucky/main arm64 libegl1 arm64 1.7.0-1build1 [29.5 kB]
177s Get:171 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5network5t64 arm64 5.15.15+dfsg-1ubuntu1 [735 kB]
177s Get:172 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
177s Get:173 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-icccm4 arm64 0.4.2-1 [10.9 kB]
177s Get:174 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-util1 arm64 0.4.0-1build3 [10.7 kB]
177s Get:175 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-image0 arm64 0.4.0-2build1 [10.8 kB]
177s Get:176 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-keysyms1 arm64 0.4.0-1build4 [7984 B]
177s Get:177 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render-util0 arm64 0.3.9-1build4 [9648 B]
177s Get:178 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shape0 arm64 1.17.0-2 [6246 B]
177s Get:179 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xinerama0 arm64 1.17.0-2 [5590 B]
177s Get:180 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xinput0 arm64 1.17.0-2 [34.2 kB]
177s Get:181 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xkb1 arm64 1.17.0-2 [32.5 kB]
177s Get:182 http://ftpmaster.internal/ubuntu plucky/main arm64 libxkbcommon-x11-0 arm64 1.6.0-1build1 [13.6 kB]
177s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5gui5t64 arm64 5.15.15+dfsg-1ubuntu1 [3679 kB]
177s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5widgets5t64 arm64 5.15.15+dfsg-1ubuntu1 [2567 kB]
177s Get:185 http://ftpmaster.internal/ubuntu plucky/main arm64 libraqm0 arm64 0.10.1-1build1 [14.7 kB]
177s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsymspg2 arm64 2.4.0-1ubuntu1 [209 kB]
177s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtbbmalloc2 arm64 2021.12.0-1ubuntu2 [38.5 kB]
177s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtbbbind-2-5 arm64 2021.12.0-1ubuntu2 [14.9 kB]
177s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtbb12 arm64 2021.12.0-1ubuntu2 [68.1 kB]
177s Get:190 http://ftpmaster.internal/ubuntu plucky/main arm64 libtheora0 arm64 1.1.1+dfsg.1-17 [227 kB]
177s Get:191 http://ftpmaster.internal/ubuntu plucky/main arm64 libopengl0 arm64 1.7.0-1build1 [35.1 kB]
177s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 libvtk9.3 arm64 9.3.0+dfsg1-1build1 [24.0 MB]
178s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 libvtk9.3-qt arm64 9.3.0+dfsg1-1build1 [183 kB]
178s Get:194 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebpdemux2 arm64 1.4.0-0.1 [12.3 kB]
178s Get:195 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebpmux3 arm64 1.4.0-0.1 [25.1 kB]
178s Get:196 http://ftpmaster.internal/ubuntu plucky/main arm64 libxslt1.1 arm64 1.1.39-0exp1ubuntu1 [167 kB]
178s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 openmpi-common all 4.1.6-13.3ubuntu2 [170 kB]
178s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 openmpi-bin arm64 4.1.6-13.3ubuntu2 [114 kB]
178s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 packmol arm64 1:20.14.3-1 [113 kB]
178s Get:200 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB]
178s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pyproject-hooks all 1.2.0-1 [10.2 kB]
178s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-toml all 0.10.2-1 [16.5 kB]
178s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-wheel all 0.44.0-1 [54.2 kB]
178s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-build all 1.2.2-1 [31.0 kB]
178s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-installer all 0.7.0+dfsg1-3 [17.4 kB]
178s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 pybuild-plugin-pyproject all 6.20241024 [1728 B]
178s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 pymatgen-test-files all 2024.10.29-1 [213 MB]
193s Get:208 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python-matplotlib-data all 3.8.3-3ubuntu1 [2928 kB]
193s Get:209 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
193s Get:210 http://ftpmaster.internal/ubuntu plucky/main arm64 sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1012 kB]
194s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 python-pymatgen-doc all 2024.6.10+dfsg1-8 [1107 kB]
194s Get:212 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all arm64 3.12.6-0ubuntu1 [886 B]
194s Get:213 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-dev arm64 3.12.7-3 [505 kB]
194s Get:214 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dev arm64 3.12.6-0ubuntu1 [26.7 kB]
194s Get:215 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all-dev arm64 3.12.6-0ubuntu1 [908 B]
194s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-annotated-types all 0.7.0-1 [19.4 kB]
194s Get:217 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB]
194s Get:218 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB]
194s Get:219 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB]
194s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB]
195s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-spglib arm64 2.4.0-1ubuntu1 [29.5 kB]
195s Get:222 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-six all 1.16.0-7 [13.1 kB]
195s Get:223 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dateutil all 2.9.0-2 [80.3 kB]
195s Get:224 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu1 [182 kB]
195s Get:225 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-pil arm64 10.4.0-1ubuntu1 [456 kB]
195s Get:226 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-tk arm64 3.12.7-3 [115 kB]
195s Get:227 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tk arm64 3.12.6-1ubuntu1 [9806 B]
195s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pil.imagetk arm64 10.4.0-1ubuntu1 [9504 B]
195s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-contourpy arm64 1.3.0-2 [179 kB]
195s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-cycler all 0.12.1-1 [9716 B]
195s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-brotli arm64 1.1.0-2build2 [340 kB]
195s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB]
195s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-mpmath all 1.3.0-1 [425 kB]
195s Get:234 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sympy all 1.13.3-1 [4228 kB]
195s Get:235 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tz all 2024.1-2 [31.4 kB]
195s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fs all 2.4.16-4 [91.3 kB]
195s Get:237 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lxml arm64 5.3.0-1 [1205 kB]
195s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build4 [26.7 kB]
195s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-unicodedata2 arm64 15.1.0+ds-1build2 [360 kB]
195s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 unicode-data all 15.1.0-1 [8878 kB]
196s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fonttools arm64 4.46.0-1build2 [1398 kB]
196s Get:242 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-kiwisolver arm64 1.4.7-2build1 [62.0 kB]
196s Get:243 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python3-matplotlib arm64 3.8.3-3ubuntu1 [4612 kB]
196s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ase all 3.23.0-1 [1754 kB]
196s Get:245 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-soupsieve all 2.6-1 [33.0 kB]
196s Get:246 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-bs4 all 4.12.3-3 [109 kB]
196s Get:247 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-bson all 4.7.3-2ubuntu2 [41.2 kB]
196s Get:248 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-cftime arm64 1.6.4-1 [195 kB]
196s Get:249 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-defusedxml all 0.7.1-2 [42.0 kB]
196s Get:250 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dnspython all 2.6.1-1ubuntu1 [163 kB]
196s Get:251 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-roman all 4.2-1 [10.0 kB]
196s Get:252 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-docutils all 0.21.2+dfsg-2 [409 kB]
196s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-dotenv all 1.0.1-1 [22.3 kB]
196s Get:254 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-email-validator all 2.2.0-1 [28.5 kB]
197s Get:255 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pandas-lib arm64 2.2.3+dfsg-5 [4422 kB]
197s Get:256 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pandas all 2.2.3+dfsg-5 [3112 kB]
197s Get:257 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pydantic-core arm64 2.23.4-2build1 [1753 kB]
197s Get:258 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pydantic arm64 2.9.1-1 [290 kB]
197s Get:259 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-tqdm all 4.67.0-1 [91.6 kB]
197s Get:260 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-monty all 2024.7.29-1 [38.0 kB]
197s Get:261 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-latexcodec all 3.0.0-1 [16.6 kB]
197s Get:262 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pybtex all 0.24.0-4 [70.0 kB]
197s Get:263 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pydantic-settings all 2.6.1-1 [40.8 kB]
197s Get:264 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-joblib all 1.3.2-5 [206 kB]
197s Get:265 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-networkx all 3.2.1-4ubuntu1 [11.5 MB]
198s Get:266 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-palettable all 3.3.3-1 [81.3 kB]
198s Get:267 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fastjsonschema all 2.20.0-1 [20.1 kB]
198s Get:268 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-platformdirs all 4.3.6-1 [16.8 kB]
198s Get:269 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB]
198s Get:270 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-jupyter-core all 5.7.2-4 [28.0 kB]
198s Get:271 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-nbformat all 5.9.1-1 [41.2 kB]
198s Get:272 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tenacity all 8.5.0-0ubuntu1 [17.0 kB]
198s Get:273 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-plotly all 5.20.0+dfsg-1 [2766 kB]
198s Get:274 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ruamel.yaml.clib arm64 0.2.8+ds-2 [129 kB]
198s Get:275 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ruamel.yaml all 0.18.6+ds-3 [126 kB]
198s Get:276 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tabulate all 0.9.0-1 [45.3 kB]
198s Get:277 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-uncertainties all 3.2.2-1 [51.4 kB]
198s Get:278 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pymatgen arm64 2024.6.10+dfsg1-8 [2499 kB]
198s Get:279 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-openbabel arm64 3.1.1+dfsg-11ubuntu1 [607 kB]
198s Get:280 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-emmet-core all 0.76.2-1 [123 kB]
198s Get:281 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-frozendict all 1.2-3 [4906 B]
198s Get:282 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py-serial arm64 3.11.0-5ubuntu1 [1064 kB]
198s Get:283 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py all 3.11.0-5ubuntu1 [7974 B]
198s Get:284 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-imagesize all 1.4.1-1 [6844 B]
198s Get:285 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B]
198s Get:286 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-netcdf4 arm64 1.7.2-1 [567 kB]
198s Get:287 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-phonopy arm64 2.23.1-1 [262 kB]
198s Get:288 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB]
198s Get:289 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB]
198s Get:290 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-snowballstemmer all 2.2.0-4build1 [59.8 kB]
198s Get:291 http://ftpmaster.internal/ubuntu plucky/main arm64 sphinx-common all 7.4.7-4 [775 kB]
198s Get:292 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-alabaster all 0.7.16-0.1 [18.5 kB]
198s Get:293 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-sphinx all 7.4.7-4 [593 kB]
198s Get:294 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sphinxcontrib.jquery all 4.1-5 [6678 B]
198s Get:295 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sphinx-rtd-theme all 3.0.1+dfsg-1 [23.5 kB]
198s Get:296 http://ftpmaster.internal/ubuntu plucky/universe arm64 mpi-default-bin arm64 1.17 [2296 B]
198s Get:297 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-mpi4py arm64 3.1.6-9ubuntu1 [449 kB]
198s Get:298 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-vtk9 arm64 9.3.0+dfsg1-1build1 [7922 kB]
200s Fetched 516 MB in 29s (17.9 MB/s)
200s Selecting previously unselected package fonts-lato.
200s (Reading database ... 
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(Reading database ... 79957 files and directories currently installed.)
200s Preparing to unpack .../000-fonts-lato_2.015-1_all.deb ...
200s Unpacking fonts-lato (2.015-1) ...
200s Selecting previously unselected package sgml-base.
200s Preparing to unpack .../001-sgml-base_1.31_all.deb ...
200s Unpacking sgml-base (1.31) ...
200s Selecting previously unselected package m4.
200s Preparing to unpack .../002-m4_1.4.19-4build1_arm64.deb ...
200s Unpacking m4 (1.4.19-4build1) ...
201s Selecting previously unselected package autoconf.
201s Preparing to unpack .../003-autoconf_2.72-3_all.deb ...
201s Unpacking autoconf (2.72-3) ...
201s Selecting previously unselected package autotools-dev.
201s Preparing to unpack .../004-autotools-dev_20220109.1_all.deb ...
201s Unpacking autotools-dev (20220109.1) ...
201s Selecting previously unselected package automake.
201s Preparing to unpack .../005-automake_1%3a1.16.5-1.3ubuntu1_all.deb ...
201s Unpacking automake (1:1.16.5-1.3ubuntu1) ...
201s Selecting previously unselected package autopoint.
201s Preparing to unpack .../006-autopoint_0.22.5-2_all.deb ...
201s Unpacking autopoint (0.22.5-2) ...
201s Selecting previously unselected package libtcl8.6:arm64.
201s Preparing to unpack .../007-libtcl8.6_8.6.15+dfsg-2_arm64.deb ...
201s Unpacking libtcl8.6:arm64 (8.6.15+dfsg-2) ...
201s Selecting previously unselected package fonts-dejavu-mono.
201s Preparing to unpack .../008-fonts-dejavu-mono_2.37-8_all.deb ...
201s Unpacking fonts-dejavu-mono (2.37-8) ...
201s Selecting previously unselected package fonts-dejavu-core.
201s Preparing to unpack .../009-fonts-dejavu-core_2.37-8_all.deb ...
201s Unpacking fonts-dejavu-core (2.37-8) ...
201s Selecting previously unselected package fontconfig-config.
201s Preparing to unpack .../010-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ...
201s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
201s Selecting previously unselected package libfontconfig1:arm64.
201s Preparing to unpack .../011-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ...
201s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ...
201s Selecting previously unselected package libxrender1:arm64.
201s Preparing to unpack .../012-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ...
201s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ...
201s Selecting previously unselected package libxft2:arm64.
201s Preparing to unpack .../013-libxft2_2.3.6-1build1_arm64.deb ...
201s Unpacking libxft2:arm64 (2.3.6-1build1) ...
201s Selecting previously unselected package x11-common.
201s Preparing to unpack .../014-x11-common_1%3a7.7+23ubuntu3_all.deb ...
201s Unpacking x11-common (1:7.7+23ubuntu3) ...
201s Selecting previously unselected package libxss1:arm64.
201s Preparing to unpack .../015-libxss1_1%3a1.2.3-1build3_arm64.deb ...
201s Unpacking libxss1:arm64 (1:1.2.3-1build3) ...
201s Selecting previously unselected package libtk8.6:arm64.
201s Preparing to unpack .../016-libtk8.6_8.6.15-1_arm64.deb ...
201s Unpacking libtk8.6:arm64 (8.6.15-1) ...
201s Selecting previously unselected package tk8.6-blt2.5.
201s Preparing to unpack .../017-tk8.6-blt2.5_2.5.3+dfsg-7build1_arm64.deb ...
201s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ...
201s Selecting previously unselected package blt.
201s Preparing to unpack .../018-blt_2.5.3+dfsg-7build1_arm64.deb ...
201s Unpacking blt (2.5.3+dfsg-7build1) ...
201s Selecting previously unselected package libisl23:arm64.
201s Preparing to unpack .../019-libisl23_0.27-1_arm64.deb ...
201s Unpacking libisl23:arm64 (0.27-1) ...
202s Selecting previously unselected package libmpc3:arm64.
202s Preparing to unpack .../020-libmpc3_1.3.1-1build2_arm64.deb ...
202s Unpacking libmpc3:arm64 (1.3.1-1build2) ...
202s Selecting previously unselected package cpp-14-aarch64-linux-gnu.
202s Preparing to unpack .../021-cpp-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ...
202s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
202s Selecting previously unselected package cpp-14.
202s Preparing to unpack .../022-cpp-14_14.2.0-8ubuntu1_arm64.deb ...
202s Unpacking cpp-14 (14.2.0-8ubuntu1) ...
202s Selecting previously unselected package cpp-aarch64-linux-gnu.
202s Preparing to unpack .../023-cpp-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ...
202s Unpacking cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
202s Selecting previously unselected package cpp.
202s Preparing to unpack .../024-cpp_4%3a14.1.0-2ubuntu1_arm64.deb ...
202s Unpacking cpp (4:14.1.0-2ubuntu1) ...
202s Selecting previously unselected package libcc1-0:arm64.
202s Preparing to unpack .../025-libcc1-0_14.2.0-8ubuntu1_arm64.deb ...
202s Unpacking libcc1-0:arm64 (14.2.0-8ubuntu1) ...
202s Selecting previously unselected package libgomp1:arm64.
202s Preparing to unpack .../026-libgomp1_14.2.0-8ubuntu1_arm64.deb ...
202s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ...
202s Selecting previously unselected package libitm1:arm64.
202s Preparing to unpack .../027-libitm1_14.2.0-8ubuntu1_arm64.deb ...
202s Unpacking libitm1:arm64 (14.2.0-8ubuntu1) ...
202s Selecting previously unselected package libasan8:arm64.
202s Preparing to unpack .../028-libasan8_14.2.0-8ubuntu1_arm64.deb ...
202s Unpacking libasan8:arm64 (14.2.0-8ubuntu1) ...
202s Selecting previously unselected package liblsan0:arm64.
202s Preparing to unpack .../029-liblsan0_14.2.0-8ubuntu1_arm64.deb ...
202s Unpacking liblsan0:arm64 (14.2.0-8ubuntu1) ...
202s Selecting previously unselected package libtsan2:arm64.
202s Preparing to unpack .../030-libtsan2_14.2.0-8ubuntu1_arm64.deb ...
202s Unpacking libtsan2:arm64 (14.2.0-8ubuntu1) ...
202s Selecting previously unselected package libubsan1:arm64.
202s Preparing to unpack .../031-libubsan1_14.2.0-8ubuntu1_arm64.deb ...
202s Unpacking libubsan1:arm64 (14.2.0-8ubuntu1) ...
202s Selecting previously unselected package libhwasan0:arm64.
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202s Selecting previously unselected package libgcc-14-dev:arm64.
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202s Selecting previously unselected package gcc-14-aarch64-linux-gnu.
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203s Selecting previously unselected package libstdc++-14-dev:arm64.
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203s Selecting previously unselected package g++-14.
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203s Selecting previously unselected package g++-aarch64-linux-gnu.
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205s Selecting previously unselected package libaec0:arm64.
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205s Selecting previously unselected package libllvm17t64:arm64.
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206s Selecting previously unselected package libamd-comgr2:arm64.
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206s Selecting previously unselected package libdrm-amdgpu1:arm64.
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206s Selecting previously unselected package libhsakmt1:arm64.
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206s Selecting previously unselected package libhsa-runtime64-1.
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206s Selecting previously unselected package libamdhip64-5.
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206s Selecting previously unselected package libblas3:arm64.
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206s Selecting previously unselected package libboost-iostreams1.83.0:arm64.
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206s Selecting previously unselected package libpixman-1-0:arm64.
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206s Selecting previously unselected package libxcb-render0:arm64.
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206s Selecting previously unselected package libcairo2:arm64.
206s Preparing to unpack .../077-libcairo2_1.18.2-2_arm64.deb ...
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206s Selecting previously unselected package libdouble-conversion3:arm64.
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207s Selecting previously unselected package libdrm-radeon1:arm64.
207s Preparing to unpack .../080-libdrm-radeon1_2.4.123-1_arm64.deb ...
207s Unpacking libdrm-radeon1:arm64 (2.4.123-1) ...
207s Selecting previously unselected package libwayland-server0:arm64.
207s Preparing to unpack .../081-libwayland-server0_1.23.0-1_arm64.deb ...
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207s Selecting previously unselected package libxcb-randr0:arm64.
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207s Selecting previously unselected package libglapi-mesa:arm64.
207s Preparing to unpack .../083-libglapi-mesa_24.2.3-1ubuntu1_arm64.deb ...
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207s Selecting previously unselected package libx11-xcb1:arm64.
207s Preparing to unpack .../084-libx11-xcb1_2%3a1.8.10-2_arm64.deb ...
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207s Selecting previously unselected package libxcb-dri2-0:arm64.
207s Preparing to unpack .../085-libxcb-dri2-0_1.17.0-2_arm64.deb ...
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207s Selecting previously unselected package libxcb-dri3-0:arm64.
207s Preparing to unpack .../086-libxcb-dri3-0_1.17.0-2_arm64.deb ...
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207s Selecting previously unselected package libxcb-present0:arm64.
207s Preparing to unpack .../087-libxcb-present0_1.17.0-2_arm64.deb ...
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207s Selecting previously unselected package libxcb-sync1:arm64.
207s Preparing to unpack .../088-libxcb-sync1_1.17.0-2_arm64.deb ...
207s Unpacking libxcb-sync1:arm64 (1.17.0-2) ...
207s Selecting previously unselected package libxcb-xfixes0:arm64.
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207s Selecting previously unselected package libxshmfence1:arm64.
207s Preparing to unpack .../090-libxshmfence1_1.3-1build5_arm64.deb ...
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207s Selecting previously unselected package mesa-libgallium:arm64.
207s Preparing to unpack .../091-mesa-libgallium_24.2.3-1ubuntu1_arm64.deb ...
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207s Selecting previously unselected package libgbm1:arm64.
207s Preparing to unpack .../092-libgbm1_24.2.3-1ubuntu1_arm64.deb ...
207s Unpacking libgbm1:arm64 (24.2.3-1ubuntu1) ...
207s Selecting previously unselected package libwayland-client0:arm64.
207s Preparing to unpack .../093-libwayland-client0_1.23.0-1_arm64.deb ...
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207s Selecting previously unselected package libegl-mesa0:arm64.
207s Preparing to unpack .../094-libegl-mesa0_24.2.3-1ubuntu1_arm64.deb ...
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207s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64.
207s Preparing to unpack .../095-libevent-pthreads-2.1-7t64_2.1.12-stable-10_arm64.deb ...
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207s Selecting previously unselected package libexpat1-dev:arm64.
207s Preparing to unpack .../096-libexpat1-dev_2.6.4-1_arm64.deb ...
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207s Selecting previously unselected package librdmacm1t64:arm64.
207s Preparing to unpack .../097-librdmacm1t64_52.0-2ubuntu1_arm64.deb ...
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207s Selecting previously unselected package libfabric1:arm64.
207s Preparing to unpack .../098-libfabric1_1.17.0-3ubuntu1_arm64.deb ...
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207s Selecting previously unselected package libgfortran5:arm64.
207s Preparing to unpack .../099-libgfortran5_14.2.0-8ubuntu1_arm64.deb ...
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207s Selecting previously unselected package libvulkan1:arm64.
207s Preparing to unpack .../100-libvulkan1_1.3.296.0-1_arm64.deb ...
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208s Selecting previously unselected package libgl1-mesa-dri:arm64.
208s Preparing to unpack .../101-libgl1-mesa-dri_24.2.3-1ubuntu1_arm64.deb ...
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208s Selecting previously unselected package libglvnd0:arm64.
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208s Selecting previously unselected package libxcb-glx0:arm64.
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208s Selecting previously unselected package libxfixes3:arm64.
208s Preparing to unpack .../104-libxfixes3_1%3a6.0.0-2build1_arm64.deb ...
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208s Selecting previously unselected package libxxf86vm1:arm64.
208s Preparing to unpack .../105-libxxf86vm1_1%3a1.1.4-1build4_arm64.deb ...
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208s Selecting previously unselected package libglx-mesa0:arm64.
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208s Selecting previously unselected package libglx0:arm64.
208s Preparing to unpack .../107-libglx0_1.7.0-1build1_arm64.deb ...
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208s Selecting previously unselected package libgl1:arm64.
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208s Selecting previously unselected package libgl2ps1.4.
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208s Selecting previously unselected package libglew2.2:arm64.
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208s Selecting previously unselected package libgraphite2-3:arm64.
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208s Selecting previously unselected package libharfbuzz0b:arm64.
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208s Selecting previously unselected package libsz2:arm64.
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208s Selecting previously unselected package libhdf5-103-1t64:arm64.
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208s Selecting previously unselected package libhdf5-hl-100t64:arm64.
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208s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ...
208s Selecting previously unselected package libhwloc15:arm64.
208s Preparing to unpack .../116-libhwloc15_2.11.2-1_arm64.deb ...
208s Unpacking libhwloc15:arm64 (2.11.2-1) ...
208s Selecting previously unselected package libice6:arm64.
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208s Selecting previously unselected package libimagequant0:arm64.
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208s Selecting previously unselected package libinchi1.
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208s Selecting previously unselected package libwacom-common.
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208s Selecting previously unselected package libwacom9:arm64.
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208s Selecting previously unselected package libinput-bin.
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209s Selecting previously unselected package libmtdev1t64:arm64.
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209s Selecting previously unselected package libinput10:arm64.
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209s Selecting previously unselected package libjpeg-turbo8:arm64.
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209s Selecting previously unselected package libjpeg8:arm64.
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209s Selecting previously unselected package libjs-bootstrap.
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209s Selecting previously unselected package libjs-jquery.
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209s Selecting previously unselected package libjs-jquery-ui.
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209s Selecting previously unselected package libjs-underscore.
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209s Selecting previously unselected package libjs-sphinxdoc.
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209s Selecting previously unselected package libjson-perl.
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209s Selecting previously unselected package libjsoncpp25:arm64.
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209s Selecting previously unselected package liblapack3:arm64.
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209s Selecting previously unselected package liblcms2-2:arm64.
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209s Selecting previously unselected package liblerc4:arm64.
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209s Selecting previously unselected package liblzf1:arm64.
209s Preparing to unpack .../138-liblzf1_3.6-4_arm64.deb ...
209s Unpacking liblzf1:arm64 (3.6-4) ...
209s Selecting previously unselected package libmaeparser1:arm64.
209s Preparing to unpack .../139-libmaeparser1_1.3.1-1build1_arm64.deb ...
209s Unpacking libmaeparser1:arm64 (1.3.1-1build1) ...
209s Selecting previously unselected package libmd4c0:arm64.
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209s Selecting previously unselected package libnetcdf19t64:arm64.
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209s Selecting previously unselected package libogg0:arm64.
210s Preparing to unpack .../142-libogg0_1.3.5-3build1_arm64.deb ...
210s Unpacking libogg0:arm64 (1.3.5-3build1) ...
210s Selecting previously unselected package libopenbabel7.
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210s Unpacking libopenbabel7 (3.1.1+dfsg-11ubuntu1) ...
210s Selecting previously unselected package libmunge2:arm64.
210s Preparing to unpack .../144-libmunge2_0.5.15-4build1_arm64.deb ...
210s Unpacking libmunge2:arm64 (0.5.15-4build1) ...
210s Selecting previously unselected package libpciaccess0:arm64.
210s Preparing to unpack .../145-libpciaccess0_0.17-3build1_arm64.deb ...
210s Unpacking libpciaccess0:arm64 (0.17-3build1) ...
210s Selecting previously unselected package libxnvctrl0:arm64.
210s Preparing to unpack .../146-libxnvctrl0_510.47.03-0ubuntu4_arm64.deb ...
210s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu4) ...
210s Selecting previously unselected package ocl-icd-libopencl1:arm64.
210s Preparing to unpack .../147-ocl-icd-libopencl1_2.3.2-1build1_arm64.deb ...
210s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1build1) ...
210s Selecting previously unselected package libhwloc-plugins:arm64.
210s Preparing to unpack .../148-libhwloc-plugins_2.11.2-1_arm64.deb ...
210s Unpacking libhwloc-plugins:arm64 (2.11.2-1) ...
210s Selecting previously unselected package libpmix2t64:arm64.
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210s Selecting previously unselected package libibumad3:arm64.
210s Preparing to unpack .../150-libibumad3_52.0-2ubuntu1_arm64.deb ...
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210s Selecting previously unselected package libibmad5:arm64.
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210s Selecting previously unselected package libucx0:arm64.
210s Preparing to unpack .../152-libucx0_1.17.0+ds-3build1_arm64.deb ...
210s Unpacking libucx0:arm64 (1.17.0+ds-3build1) ...
210s Selecting previously unselected package libopenmpi3t64:arm64.
210s Preparing to unpack .../153-libopenmpi3t64_4.1.6-13.3ubuntu2_arm64.deb ...
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210s Selecting previously unselected package libpcre2-16-0:arm64.
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210s Selecting previously unselected package proj-data.
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210s Selecting previously unselected package libjbig0:arm64.
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211s Selecting previously unselected package libsharpyuv0:arm64.
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211s Selecting previously unselected package libwebp7:arm64.
211s Preparing to unpack .../158-libwebp7_1.4.0-0.1_arm64.deb ...
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211s Selecting previously unselected package libtiff6:arm64.
211s Preparing to unpack .../159-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ...
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211s Selecting previously unselected package libproj25:arm64.
211s Preparing to unpack .../160-libproj25_9.5.0-1_arm64.deb ...
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211s Selecting previously unselected package zlib1g-dev:arm64.
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211s Selecting previously unselected package libpython3.12-dev:arm64.
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211s Selecting previously unselected package libpython3-dev:arm64.
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211s Selecting previously unselected package libpython3-all-dev:arm64.
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211s Unpacking libpython3-all-dev:arm64 (3.12.6-0ubuntu1) ...
211s Selecting previously unselected package libqhull-r8.0:arm64.
211s Preparing to unpack .../165-libqhull-r8.0_2020.2-6build1_arm64.deb ...
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211s Selecting previously unselected package libqt5core5t64:arm64.
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211s Selecting previously unselected package libqt5dbus5t64:arm64.
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211s Selecting previously unselected package libegl1:arm64.
211s Preparing to unpack .../168-libegl1_1.7.0-1build1_arm64.deb ...
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211s Selecting previously unselected package libqt5network5t64:arm64.
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211s Selecting previously unselected package libsm6:arm64.
211s Preparing to unpack .../170-libsm6_2%3a1.2.4-1_arm64.deb ...
211s Unpacking libsm6:arm64 (2:1.2.4-1) ...
211s Selecting previously unselected package libxcb-icccm4:arm64.
211s Preparing to unpack .../171-libxcb-icccm4_0.4.2-1_arm64.deb ...
211s Unpacking libxcb-icccm4:arm64 (0.4.2-1) ...
211s Selecting previously unselected package libxcb-util1:arm64.
211s Preparing to unpack .../172-libxcb-util1_0.4.0-1build3_arm64.deb ...
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211s Selecting previously unselected package libxcb-image0:arm64.
211s Preparing to unpack .../173-libxcb-image0_0.4.0-2build1_arm64.deb ...
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211s Selecting previously unselected package libxcb-keysyms1:arm64.
211s Preparing to unpack .../174-libxcb-keysyms1_0.4.0-1build4_arm64.deb ...
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211s Selecting previously unselected package libxcb-render-util0:arm64.
211s Preparing to unpack .../175-libxcb-render-util0_0.3.9-1build4_arm64.deb ...
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211s Selecting previously unselected package libxcb-shape0:arm64.
211s Preparing to unpack .../176-libxcb-shape0_1.17.0-2_arm64.deb ...
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212s Selecting previously unselected package libxcb-xinerama0:arm64.
212s Preparing to unpack .../177-libxcb-xinerama0_1.17.0-2_arm64.deb ...
212s Unpacking libxcb-xinerama0:arm64 (1.17.0-2) ...
212s Selecting previously unselected package libxcb-xinput0:arm64.
212s Preparing to unpack .../178-libxcb-xinput0_1.17.0-2_arm64.deb ...
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212s Selecting previously unselected package libxcb-xkb1:arm64.
212s Preparing to unpack .../179-libxcb-xkb1_1.17.0-2_arm64.deb ...
212s Unpacking libxcb-xkb1:arm64 (1.17.0-2) ...
212s Selecting previously unselected package libxkbcommon-x11-0:arm64.
212s Preparing to unpack .../180-libxkbcommon-x11-0_1.6.0-1build1_arm64.deb ...
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212s Selecting previously unselected package libqt5gui5t64:arm64.
212s Preparing to unpack .../181-libqt5gui5t64_5.15.15+dfsg-1ubuntu1_arm64.deb ...
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212s Selecting previously unselected package libqt5widgets5t64:arm64.
212s Preparing to unpack .../182-libqt5widgets5t64_5.15.15+dfsg-1ubuntu1_arm64.deb ...
212s Unpacking libqt5widgets5t64:arm64 (5.15.15+dfsg-1ubuntu1) ...
212s Selecting previously unselected package libraqm0:arm64.
212s Preparing to unpack .../183-libraqm0_0.10.1-1build1_arm64.deb ...
212s Unpacking libraqm0:arm64 (0.10.1-1build1) ...
212s Selecting previously unselected package libsymspg2:arm64.
212s Preparing to unpack .../184-libsymspg2_2.4.0-1ubuntu1_arm64.deb ...
212s Unpacking libsymspg2:arm64 (2.4.0-1ubuntu1) ...
212s Selecting previously unselected package libtbbmalloc2:arm64.
212s Preparing to unpack .../185-libtbbmalloc2_2021.12.0-1ubuntu2_arm64.deb ...
212s Unpacking libtbbmalloc2:arm64 (2021.12.0-1ubuntu2) ...
212s Selecting previously unselected package libtbbbind-2-5:arm64.
212s Preparing to unpack .../186-libtbbbind-2-5_2021.12.0-1ubuntu2_arm64.deb ...
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212s Selecting previously unselected package libtbb12:arm64.
212s Preparing to unpack .../187-libtbb12_2021.12.0-1ubuntu2_arm64.deb ...
212s Unpacking libtbb12:arm64 (2021.12.0-1ubuntu2) ...
212s Selecting previously unselected package libtheora0:arm64.
212s Preparing to unpack .../188-libtheora0_1.1.1+dfsg.1-17_arm64.deb ...
212s Unpacking libtheora0:arm64 (1.1.1+dfsg.1-17) ...
212s Selecting previously unselected package libopengl0:arm64.
212s Preparing to unpack .../189-libopengl0_1.7.0-1build1_arm64.deb ...
212s Unpacking libopengl0:arm64 (1.7.0-1build1) ...
212s Selecting previously unselected package libvtk9.3:arm64.
212s Preparing to unpack .../190-libvtk9.3_9.3.0+dfsg1-1build1_arm64.deb ...
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213s Selecting previously unselected package libvtk9.3-qt:arm64.
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213s Unpacking libvtk9.3-qt:arm64 (9.3.0+dfsg1-1build1) ...
213s Selecting previously unselected package libwebpdemux2:arm64.
213s Preparing to unpack .../192-libwebpdemux2_1.4.0-0.1_arm64.deb ...
213s Unpacking libwebpdemux2:arm64 (1.4.0-0.1) ...
213s Selecting previously unselected package libwebpmux3:arm64.
213s Preparing to unpack .../193-libwebpmux3_1.4.0-0.1_arm64.deb ...
213s Unpacking libwebpmux3:arm64 (1.4.0-0.1) ...
213s Selecting previously unselected package libxslt1.1:arm64.
213s Preparing to unpack .../194-libxslt1.1_1.1.39-0exp1ubuntu1_arm64.deb ...
213s Unpacking libxslt1.1:arm64 (1.1.39-0exp1ubuntu1) ...
213s Selecting previously unselected package openmpi-common.
213s Preparing to unpack .../195-openmpi-common_4.1.6-13.3ubuntu2_all.deb ...
213s Unpacking openmpi-common (4.1.6-13.3ubuntu2) ...
213s Selecting previously unselected package openmpi-bin.
213s Preparing to unpack .../196-openmpi-bin_4.1.6-13.3ubuntu2_arm64.deb ...
213s Unpacking openmpi-bin (4.1.6-13.3ubuntu2) ...
213s Selecting previously unselected package packmol.
213s Preparing to unpack .../197-packmol_1%3a20.14.3-1_arm64.deb ...
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213s Selecting previously unselected package python3-packaging.
213s Preparing to unpack .../198-python3-packaging_24.1-1_all.deb ...
213s Unpacking python3-packaging (24.1-1) ...
213s Selecting previously unselected package python3-pyproject-hooks.
213s Preparing to unpack .../199-python3-pyproject-hooks_1.2.0-1_all.deb ...
213s Unpacking python3-pyproject-hooks (1.2.0-1) ...
213s Selecting previously unselected package python3-toml.
213s Preparing to unpack .../200-python3-toml_0.10.2-1_all.deb ...
213s Unpacking python3-toml (0.10.2-1) ...
213s Selecting previously unselected package python3-wheel.
213s Preparing to unpack .../201-python3-wheel_0.44.0-1_all.deb ...
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213s Selecting previously unselected package python3-build.
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214s Unpacking python3-build (1.2.2-1) ...
214s Selecting previously unselected package python3-installer.
214s Preparing to unpack .../203-python3-installer_0.7.0+dfsg1-3_all.deb ...
214s Unpacking python3-installer (0.7.0+dfsg1-3) ...
214s Selecting previously unselected package pybuild-plugin-pyproject.
214s Preparing to unpack .../204-pybuild-plugin-pyproject_6.20241024_all.deb ...
214s Unpacking pybuild-plugin-pyproject (6.20241024) ...
214s Selecting previously unselected package pymatgen-test-files.
214s Preparing to unpack .../205-pymatgen-test-files_2024.10.29-1_all.deb ...
214s Unpacking pymatgen-test-files (2024.10.29-1) ...
217s Selecting previously unselected package python-matplotlib-data.
217s Preparing to unpack .../206-python-matplotlib-data_3.8.3-3ubuntu1_all.deb ...
217s Unpacking python-matplotlib-data (3.8.3-3ubuntu1) ...
217s Selecting previously unselected package libjs-mathjax.
217s Preparing to unpack .../207-libjs-mathjax_2.7.9+dfsg-1_all.deb ...
217s Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
217s Selecting previously unselected package sphinx-rtd-theme-common.
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217s Unpacking sphinx-rtd-theme-common (3.0.1+dfsg-1) ...
218s Selecting previously unselected package python-pymatgen-doc.
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218s Selecting previously unselected package python3-all.
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218s Selecting previously unselected package python3.12-dev.
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218s Unpacking python3.12-dev (3.12.7-3) ...
218s Selecting previously unselected package python3-dev.
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218s Selecting previously unselected package python3-all-dev.
218s Preparing to unpack .../213-python3-all-dev_3.12.6-0ubuntu1_arm64.deb ...
218s Unpacking python3-all-dev (3.12.6-0ubuntu1) ...
218s Selecting previously unselected package python3-annotated-types.
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218s Unpacking python3-annotated-types (0.7.0-1) ...
218s Selecting previously unselected package python3-appdirs.
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218s Unpacking python3-appdirs (1.4.4-4) ...
218s Selecting previously unselected package python3-numpy.
218s Preparing to unpack .../216-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ...
218s Unpacking python3-numpy (1:1.26.4+ds-11build1) ...
218s Selecting previously unselected package python3-decorator.
218s Preparing to unpack .../217-python3-decorator_5.1.1-5_all.deb ...
218s Unpacking python3-decorator (5.1.1-5) ...
218s Selecting previously unselected package python3-scipy.
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219s Selecting previously unselected package python3-spglib.
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219s Unpacking python3-spglib (2.4.0-1ubuntu1) ...
219s Selecting previously unselected package python3-six.
219s Preparing to unpack .../220-python3-six_1.16.0-7_all.deb ...
219s Unpacking python3-six (1.16.0-7) ...
219s Selecting previously unselected package python3-dateutil.
219s Preparing to unpack .../221-python3-dateutil_2.9.0-2_all.deb ...
219s Unpacking python3-dateutil (2.9.0-2) ...
219s Selecting previously unselected package libopenjp2-7:arm64.
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219s Unpacking libopenjp2-7:arm64 (2.5.0-2ubuntu1) ...
219s Selecting previously unselected package python3-pil:arm64.
219s Preparing to unpack .../223-python3-pil_10.4.0-1ubuntu1_arm64.deb ...
219s Unpacking python3-pil:arm64 (10.4.0-1ubuntu1) ...
219s Selecting previously unselected package python3.12-tk.
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219s Selecting previously unselected package python3-tk:arm64.
219s Preparing to unpack .../225-python3-tk_3.12.6-1ubuntu1_arm64.deb ...
219s Unpacking python3-tk:arm64 (3.12.6-1ubuntu1) ...
219s Selecting previously unselected package python3-pil.imagetk:arm64.
219s Preparing to unpack .../226-python3-pil.imagetk_10.4.0-1ubuntu1_arm64.deb ...
219s Unpacking python3-pil.imagetk:arm64 (10.4.0-1ubuntu1) ...
219s Selecting previously unselected package python3-contourpy.
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219s Unpacking python3-contourpy (1.3.0-2) ...
219s Selecting previously unselected package python3-cycler.
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219s Unpacking python3-cycler (0.12.1-1) ...
219s Selecting previously unselected package python3-brotli.
219s Preparing to unpack .../229-python3-brotli_1.1.0-2build2_arm64.deb ...
219s Unpacking python3-brotli (1.1.0-2build2) ...
219s Selecting previously unselected package python3-ufolib2.
219s Preparing to unpack .../230-python3-ufolib2_0.16.1+dfsg1-1_all.deb ...
219s Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ...
219s Selecting previously unselected package python3-mpmath.
219s Preparing to unpack .../231-python3-mpmath_1.3.0-1_all.deb ...
219s Unpacking python3-mpmath (1.3.0-1) ...
219s Selecting previously unselected package python3-sympy.
219s Preparing to unpack .../232-python3-sympy_1.13.3-1_all.deb ...
219s Unpacking python3-sympy (1.13.3-1) ...
220s Selecting previously unselected package python3-tz.
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220s Unpacking python3-tz (2024.1-2) ...
220s Selecting previously unselected package python3-fs.
220s Preparing to unpack .../234-python3-fs_2.4.16-4_all.deb ...
220s Unpacking python3-fs (2.4.16-4) ...
220s Selecting previously unselected package python3-lxml:arm64.
220s Preparing to unpack .../235-python3-lxml_5.3.0-1_arm64.deb ...
220s Unpacking python3-lxml:arm64 (5.3.0-1) ...
220s Selecting previously unselected package python3-lz4.
220s Preparing to unpack .../236-python3-lz4_4.0.2+dfsg-1build4_arm64.deb ...
220s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ...
220s Selecting previously unselected package python3-unicodedata2.
220s Preparing to unpack .../237-python3-unicodedata2_15.1.0+ds-1build2_arm64.deb ...
220s Unpacking python3-unicodedata2 (15.1.0+ds-1build2) ...
220s Selecting previously unselected package unicode-data.
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220s Unpacking unicode-data (15.1.0-1) ...
220s Selecting previously unselected package python3-fonttools.
220s Preparing to unpack .../239-python3-fonttools_4.46.0-1build2_arm64.deb ...
220s Unpacking python3-fonttools (4.46.0-1build2) ...
220s Selecting previously unselected package python3-kiwisolver.
220s Preparing to unpack .../240-python3-kiwisolver_1.4.7-2build1_arm64.deb ...
220s Unpacking python3-kiwisolver (1.4.7-2build1) ...
220s Selecting previously unselected package python3-matplotlib.
220s Preparing to unpack .../241-python3-matplotlib_3.8.3-3ubuntu1_arm64.deb ...
220s Unpacking python3-matplotlib (3.8.3-3ubuntu1) ...
220s Selecting previously unselected package python3-ase.
220s Preparing to unpack .../242-python3-ase_3.23.0-1_all.deb ...
220s Unpacking python3-ase (3.23.0-1) ...
221s Selecting previously unselected package python3-soupsieve.
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221s Unpacking python3-soupsieve (2.6-1) ...
221s Selecting previously unselected package python3-bs4.
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221s Unpacking python3-bs4 (4.12.3-3) ...
221s Selecting previously unselected package python3-bson.
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221s Unpacking python3-bson (4.7.3-2ubuntu2) ...
221s Selecting previously unselected package python3-cftime.
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221s Unpacking python3-cftime (1.6.4-1) ...
221s Selecting previously unselected package python3-defusedxml.
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221s Unpacking python3-defusedxml (0.7.1-2) ...
221s Selecting previously unselected package python3-dnspython.
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221s Selecting previously unselected package python3-roman.
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221s Unpacking python3-roman (4.2-1) ...
221s Selecting previously unselected package python3-docutils.
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221s Unpacking python3-docutils (0.21.2+dfsg-2) ...
221s Selecting previously unselected package python3-dotenv.
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221s Unpacking python3-dotenv (1.0.1-1) ...
221s Selecting previously unselected package python3-email-validator.
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221s Unpacking python3-email-validator (2.2.0-1) ...
221s Selecting previously unselected package python3-pandas-lib:arm64.
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221s Unpacking python3-pandas-lib:arm64 (2.2.3+dfsg-5) ...
221s Selecting previously unselected package python3-pandas.
221s Preparing to unpack .../254-python3-pandas_2.2.3+dfsg-5_all.deb ...
221s Unpacking python3-pandas (2.2.3+dfsg-5) ...
221s Selecting previously unselected package python3-pydantic-core.
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221s Unpacking python3-pydantic-core (2.23.4-2build1) ...
221s Selecting previously unselected package python3-pydantic.
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222s Selecting previously unselected package python3-tqdm.
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222s Selecting previously unselected package python3-monty.
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222s Selecting previously unselected package python3-latexcodec.
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222s Unpacking python3-latexcodec (3.0.0-1) ...
222s Selecting previously unselected package python3-pybtex.
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222s Unpacking python3-pybtex (0.24.0-4) ...
222s Selecting previously unselected package python3-pydantic-settings.
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222s Selecting previously unselected package python3-joblib.
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222s Unpacking python3-joblib (1.3.2-5) ...
222s Selecting previously unselected package python3-networkx.
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222s Unpacking python3-networkx (3.2.1-4ubuntu1) ...
222s Selecting previously unselected package python3-palettable.
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222s Unpacking python3-palettable (3.3.3-1) ...
222s Selecting previously unselected package python3-fastjsonschema.
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222s Selecting previously unselected package python3-platformdirs.
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222s Unpacking python3-platformdirs (4.3.6-1) ...
222s Selecting previously unselected package python3-traitlets.
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222s Unpacking python3-traitlets (5.14.3+really5.14.3-1) ...
223s Selecting previously unselected package python3-jupyter-core.
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223s Unpacking python3-jupyter-core (5.7.2-4) ...
223s Selecting previously unselected package python3-nbformat.
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223s Unpacking python3-nbformat (5.9.1-1) ...
223s Selecting previously unselected package python3-tenacity.
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223s Unpacking python3-tenacity (8.5.0-0ubuntu1) ...
223s Selecting previously unselected package python3-plotly.
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223s Unpacking python3-plotly (5.20.0+dfsg-1) ...
224s Selecting previously unselected package python3-ruamel.yaml.clib:arm64.
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224s Unpacking python3-ruamel.yaml.clib:arm64 (0.2.8+ds-2) ...
224s Selecting previously unselected package python3-ruamel.yaml.
224s Preparing to unpack .../273-python3-ruamel.yaml_0.18.6+ds-3_all.deb ...
224s Unpacking python3-ruamel.yaml (0.18.6+ds-3) ...
224s Selecting previously unselected package python3-tabulate.
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224s Unpacking python3-tabulate (0.9.0-1) ...
224s Selecting previously unselected package python3-uncertainties.
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224s Unpacking python3-uncertainties (3.2.2-1) ...
224s Selecting previously unselected package python3-pymatgen.
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224s Selecting previously unselected package python3-openbabel.
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224s Unpacking python3-openbabel (3.1.1+dfsg-11ubuntu1) ...
224s Selecting previously unselected package python3-emmet-core.
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224s Selecting previously unselected package python3-frozendict.
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224s Unpacking python3-frozendict (1.2-3) ...
224s Selecting previously unselected package python3-h5py-serial.
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224s Selecting previously unselected package python3-h5py.
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225s Selecting previously unselected package python3-imagesize.
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225s Selecting previously unselected package python3-iniconfig.
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225s Selecting previously unselected package python3-netcdf4.
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225s Selecting previously unselected package python3-phonopy.
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225s Selecting previously unselected package python3-pluggy.
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225s Selecting previously unselected package python3-pytest.
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225s Selecting previously unselected package python3-snowballstemmer.
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225s Selecting previously unselected package sphinx-common.
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225s Unpacking sphinx-common (7.4.7-4) ...
225s Selecting previously unselected package python3-alabaster.
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225s Selecting previously unselected package python3-sphinx.
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225s Selecting previously unselected package python3-sphinxcontrib.jquery.
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225s Selecting previously unselected package python3-sphinx-rtd-theme.
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226s Selecting previously unselected package autopkgtest-satdep.
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226s Setting up python3-dotenv (1.0.1-1) ...
226s Setting up dh-python (6.20241024) ...
226s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
226s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ...
226s Setting up liblcms2-2:arm64 (2.16-2) ...
226s Setting up python3-iniconfig (1.1.1-2) ...
226s Setting up libtbbmalloc2:arm64 (2021.12.0-1ubuntu2) ...
226s Setting up libpixman-1-0:arm64 (0.44.0-3) ...
226s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ...
226s Setting up libwayland-server0:arm64 (1.23.0-1) ...
226s Setting up libx11-xcb1:arm64 (2:1.8.10-2) ...
226s Setting up libpciaccess0:arm64 (0.17-3build1) ...
226s Setting up libdouble-conversion3:arm64 (3.3.0-1build1) ...
226s Setting up fonts-lato (2.015-1) ...
226s Setting up fonts-mathjax (2.7.9+dfsg-1) ...
226s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ...
226s Setting up python3-pydantic-core (2.23.4-2build1) ...
226s Setting up libogg0:arm64 (1.3.5-3build1) ...
226s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ...
226s Setting up proj-data (9.5.0-1) ...
226s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
226s Setting up libxcb-xinput0:arm64 (1.17.0-2) ...
226s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ...
226s Setting up python3-joblib (1.3.2-5) ...
227s Setting up python3-lz4 (4.0.2+dfsg-1build4) ...
227s Setting up libxcb-render0:arm64 (1.17.0-2) ...
227s Setting up python3-defusedxml (0.7.1-2) ...
227s Setting up libarchive-zip-perl (1.68-1) ...
227s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ...
227s Setting up libdrm-radeon1:arm64 (2.4.123-1) ...
227s Setting up libglvnd0:arm64 (1.7.0-1build1) ...
227s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
227s Setting up python3-alabaster (0.7.16-0.1) ...
227s Setting up python3-unicodedata2 (15.1.0+ds-1build2) ...
227s Setting up fonts-lyx (2.4.2.1-1) ...
227s Setting up libxcb-glx0:arm64 (1.17.0-2) ...
227s Setting up python3-tenacity (8.5.0-0ubuntu1) ...
227s Setting up libdebhelper-perl (13.20ubuntu1) ...
227s Setting up python3-tqdm (4.67.0-1) ...
227s Setting up libxcb-keysyms1:arm64 (0.4.0-1build4) ...
227s Setting up libxcb-shape0:arm64 (1.17.0-2) ...
227s Setting up python3-ruamel.yaml.clib:arm64 (0.2.8+ds-2) ...
227s Setting up x11-common (1:7.7+23ubuntu3) ...
228s Setting up python3-frozendict (1.2-3) ...
228s Setting up libibumad3:arm64 (52.0-2ubuntu1) ...
228s Setting up libdeflate0:arm64 (1.22-1) ...
228s Setting up python3-tabulate (0.9.0-1) ...
228s Setting up m4 (1.4.19-4build1) ...
228s Setting up python3-latexcodec (3.0.0-1) ...
228s Setting up libqhull-r8.0:arm64 (2020.2-6build1) ...
228s Setting up libxcb-render-util0:arm64 (0.3.9-1build4) ...
228s Setting up python3-all (3.12.6-0ubuntu1) ...
228s Setting up libxcb-shm0:arm64 (1.17.0-2) ...
228s Setting up libibmad5:arm64 (52.0-2ubuntu1) ...
228s Setting up libxcb-icccm4:arm64 (0.4.2-1) ...
228s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ...
228s Setting up python3-networkx (3.2.1-4ubuntu1) ...
229s Setting up python3-wheel (0.44.0-1) ...
230s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ...
230s Setting up python3-annotated-types (0.7.0-1) ...
230s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu3) ...
230s Setting up libaec0:arm64 (1.1.3-1) ...
230s Setting up python3-platformdirs (4.3.6-1) ...
230s Setting up libopengl0:arm64 (1.7.0-1build1) ...
230s Setting up python3-tz (2024.1-2) ...
230s Setting up libxcb-util1:arm64 (0.4.0-1build3) ...
230s Setting up libxxf86vm1:arm64 (1:1.1.4-1build4) ...
230s Setting up libxcb-xkb1:arm64 (1.17.0-2) ...
230s Setting up libxcb-image0:arm64 (0.4.0-2build1) ...
230s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ...
230s Setting up libxcb-present0:arm64 (1.17.0-2) ...
230s Setting up unicode-data (15.1.0-1) ...
230s Setting up libsymspg2:arm64 (2.4.0-1ubuntu1) ...
230s Setting up python3-six (1.16.0-7) ...
230s Setting up python3-bson (4.7.3-2ubuntu2) ...
230s Setting up python3-palettable (3.3.3-1) ...
231s Setting up python3-roman (4.2-1) ...
231s Setting up libqt5core5t64:arm64 (5.15.15+dfsg-1ubuntu1) ...
231s Setting up python3-decorator (5.1.1-5) ...
231s Setting up autotools-dev (20220109.1) ...
231s Setting up libblas3:arm64 (3.12.0-3build2) ...
231s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
231s Setting up python3-packaging (24.1-1) ...
231s Setting up libxcb-xinerama0:arm64 (1.17.0-2) ...
231s Setting up libmunge2:arm64 (0.5.15-4build1) ...
231s Setting up libllvm17t64:arm64 (1:17.0.6-18) ...
231s Setting up libexpat1-dev:arm64 (2.6.4-1) ...
231s Setting up python3-pyproject-hooks (1.2.0-1) ...
231s Setting up libxfixes3:arm64 (1:6.0.0-2build1) ...
231s Setting up libxcb-sync1:arm64 (1.17.0-2) ...
231s Setting up python3-snowballstemmer (2.2.0-4build1) ...
232s Setting up libboost-iostreams1.83.0:arm64 (1.83.0-3.2ubuntu2) ...
232s Setting up python3-brotli (1.1.0-2build2) ...
232s Setting up liblzf1:arm64 (3.6-4) ...
232s Setting up python3-cycler (0.12.1-1) ...
232s Setting up libimagequant0:arm64 (2.18.0-1build1) ...
232s Setting up libxkbcommon-x11-0:arm64 (1.6.0-1build1) ...
232s Setting up fonts-dejavu-mono (2.37-8) ...
232s Setting up python3-kiwisolver (1.4.7-2build1) ...
232s Setting up libhwloc15:arm64 (2.11.2-1) ...
232s Setting up libmpc3:arm64 (1.3.1-1build2) ...
232s Setting up cython3 (3.0.11+dfsg-1ubuntu2) ...
233s Setting up libtcl8.6:arm64 (8.6.15+dfsg-2) ...
233s Setting up autopoint (0.22.5-2) ...
233s Setting up libjsoncpp25:arm64 (1.9.5-6build1) ...
233s Setting up fonts-dejavu-core (2.37-8) ...
233s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ...
233s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ...
233s Setting up python3-toml (0.10.2-1) ...
233s Setting up python3-installer (0.7.0+dfsg1-3) ...
233s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ...
233s Setting up libvulkan1:arm64 (1.3.296.0-1) ...
233s Setting up autoconf (2.72-3) ...
233s Setting up python3-pluggy (1.5.0-1) ...
233s Setting up libwebp7:arm64 (1.4.0-0.1) ...
233s Setting up python3-pybtex (0.24.0-4) ...
233s Setting up libubsan1:arm64 (14.2.0-8ubuntu1) ...
233s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ...
233s Setting up python3-fastjsonschema (2.20.0-1) ...
234s Setting up python3-ruamel.yaml (0.18.6+ds-3) ...
234s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
234s Setting up dwz (0.15-1build6) ...
234s Setting up libmtdev1t64:arm64 (1.1.6-1.2) ...
234s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ...
234s Setting up libxshmfence1:arm64 (1.3-1build5) ...
234s Setting up libhwasan0:arm64 (14.2.0-8ubuntu1) ...
234s Setting up python3-dnspython (2.6.1-1ubuntu1) ...
234s Setting up libxcb-randr0:arm64 (1.17.0-2) ...
234s Setting up python3-traitlets (5.14.3+really5.14.3-1) ...
234s Setting up libasan8:arm64 (14.2.0-8ubuntu1) ...
234s Setting up libjson-perl (4.10000-1) ...
234s Setting up libxslt1.1:arm64 (1.1.39-0exp1ubuntu1) ...
234s Setting up openmpi-common (4.1.6-13.3ubuntu2) ...
234s Setting up debugedit (1:5.1-1) ...
234s Setting up libmd4c0:arm64 (0.5.2-2) ...
234s Setting up librdmacm1t64:arm64 (52.0-2ubuntu1) ...
234s Setting up libopenjp2-7:arm64 (2.5.0-2ubuntu1) ...
234s Setting up libharfbuzz0b:arm64 (10.0.1-1) ...
234s Setting up python3-dateutil (2.9.0-2) ...
234s Setting up python3-email-validator (2.2.0-1) ...
235s Setting up sgml-base (1.31) ...
235s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ...
235s Setting up libxss1:arm64 (1:1.2.3-1build3) ...
235s Setting up libtsan2:arm64 (14.2.0-8ubuntu1) ...
235s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
235s Setting up python3-mpmath (1.3.0-1) ...
235s Setting up libisl23:arm64 (0.27-1) ...
235s Setting up python3-build (1.2.2-1) ...
235s Setting up python-matplotlib-data (3.8.3-3ubuntu1) ...
235s Setting up libwebpmux3:arm64 (1.4.0-0.1) ...
235s Setting up python3-appdirs (1.4.4-4) ...
235s Setting up python3-soupsieve (2.6-1) ...
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265s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
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265s Setting up openmpi-bin (4.1.6-13.3ubuntu2) ...
265s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
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265s Setting up mpi-default-bin (1.17) ...
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265s Setting up python3-mpi4py (3.1.6-9ubuntu1) ...
265s Setting up libvtk9.3:arm64 (9.3.0+dfsg1-1build1) ...
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265s Setting up python3-vtk9 (9.3.0+dfsg1-1build1) ...
265s /usr/lib/python3/dist-packages/vtkmodules/util/vtkMethodParser.py:304: SyntaxWarning: invalid escape sequence '\S'
265s   patn = re.compile ("  \S")
265s Setting up python3-fonttools (4.46.0-1build2) ...
266s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ...
266s Setting up python3-matplotlib (3.8.3-3ubuntu1) ...
268s Setting up python3-ase (3.23.0-1) ...
270s Setting up python3-phonopy (2.23.1-1) ...
270s Setting up python3-pymatgen (2024.6.10+dfsg1-8) ...
271s /usr/lib/python3/dist-packages/pymatgen/io/lammps/outputs.py:115: SyntaxWarning: invalid escape sequence '\+'
271s   pattern = file_pattern.replace("+","\+").replace("*", "([0-9]+)").replace("\\", "\\\\")
271s Setting up python3-emmet-core (0.76.2-1) ...
272s Processing triggers for libc-bin (2.40-1ubuntu3) ...
272s Processing triggers for man-db (2.13.0-1) ...
273s Processing triggers for udev (256.5-2ubuntu4) ...
274s Processing triggers for install-info (7.1.1-1) ...
274s Processing triggers for sgml-base (1.31) ...
274s Setting up docutils-common (0.21.2+dfsg-2) ...
274s Processing triggers for sgml-base (1.31) ...
274s Setting up python3-docutils (0.21.2+dfsg-2) ...
275s Setting up python3-sphinx (7.4.7-4) ...
275s Setting up python3-sphinxcontrib.jquery (4.1-5) ...
275s Setting up python3-sphinx-rtd-theme (3.0.1+dfsg-1) ...
276s Setting up autopkgtest-satdep (0) ...
288s (Reading database ... 122914 files and directories currently installed.)
288s Removing autopkgtest-satdep (0) ...
289s autopkgtest [02:41:57]: test test-pymatgen: [-----------------------
289s skipping tests with SKIP_TEST_LIST=TestGenKpt TestHighSymmetryPoint test_from_multi_jobs_file test_from_string test_read_molecule test_read_nbo test_read_negative test_read_plots test_read_write_nbo7 test_all test_custom_smd_write test_sets test_rotor_search_rrs BSDOSPlotterTest test_cdft_dc_parsing test_get_structure_by_id test_CifWriter test_read_write test_init test_get_site_symmetries test_babel_PC_with_RO_depth_0_vs_depth_10 test_fit test_rotor_search_wrs test_get_parchg (TestAnharmonicQuasiharmociDebyeApprox and test_gruneisen_parameter)
315s ============================= test session starts ==============================
315s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0
315s rootdir: /tmp/autopkgtest.9Td4bJ/build.Atq/src
315s configfile: pyproject.toml
315s plugins: typeguard-4.4.1
315s collected 2924 items / 298 deselected / 2 skipped / 2626 selected
315s 
316s tests/alchemy/test_filters.py .......                                    [  0%]
316s tests/alchemy/test_materials.py .........                                [  0%]
316s tests/alchemy/test_transmuters.py .                                      [  0%]
319s tests/analysis/chemenv/connectivity/test_connected_components.py .....   [  0%]
319s tests/analysis/chemenv/connectivity/test_environment_nodes.py ...        [  0%]
319s tests/analysis/chemenv/connectivity/test_structure_connectivity.py .     [  0%]
319s tests/analysis/chemenv/coordination_environments/test_chemenv_strategies.py . [  1%]
319s .                                                                        [  1%]
319s tests/analysis/chemenv/coordination_environments/test_coordination_geometries.py . [  1%]
319s ..                                                                       [  1%]
319s tests/analysis/chemenv/coordination_environments/test_coordination_geometry_finder.py . [  1%]
325s ..                                                                       [  1%]
329s tests/analysis/chemenv/coordination_environments/test_structure_environments.py . [  1%]
329s ..                                                                       [  1%]
329s tests/analysis/chemenv/coordination_environments/test_voronoi.py ..      [  1%]
330s tests/analysis/chemenv/coordination_environments/test_weights.py ....... [  1%]
330s                                                                          [  1%]
330s tests/analysis/chemenv/utils/test_chemenv_config.py .                    [  1%]
330s tests/analysis/chemenv/utils/test_coordination_geometry_utils.py ....... [  2%]
330s .....                                                                    [  2%]
330s tests/analysis/chemenv/utils/test_func_utils.py ...                      [  2%]
330s tests/analysis/chemenv/utils/test_graph_utils.py ....                    [  2%]
330s tests/analysis/chemenv/utils/test_math_utils.py .........                [  2%]
330s tests/analysis/diffraction/test_neutron.py ..                            [  2%]
332s tests/analysis/diffraction/test_tem.py ....................              [  3%]
332s tests/analysis/diffraction/test_xrd.py ..                                [  3%]
386s tests/analysis/elasticity/test_elastic.py .........................      [  4%]
386s tests/analysis/elasticity/test_strain.py ........                        [  5%]
386s tests/analysis/elasticity/test_stress.py .                               [  5%]
393s tests/analysis/ferroelectricity/test_polarization.py ............        [  5%]
395s tests/analysis/interfaces/test_coherent_interface.py ..                  [  5%]
401s tests/analysis/interfaces/test_substrate_analyzer.py ..                  [  5%]
401s tests/analysis/interfaces/test_zsl.py ..                                 [  5%]
410s tests/analysis/magnetism/test_analyzer.py .........s.                    [  6%]
410s tests/analysis/magnetism/test_heisenberg.py .......                      [  6%]
411s tests/analysis/magnetism/test_jahnteller.py ...                          [  6%]
412s tests/analysis/solar/test_slme.py .                                      [  6%]
413s tests/analysis/structure_prediction/test_dopant_predictor.py ..          [  6%]
413s tests/analysis/structure_prediction/test_substitution_probability.py ... [  6%]
413s                                                                          [  6%]
413s tests/analysis/structure_prediction/test_substitutor.py ..               [  6%]
414s tests/analysis/structure_prediction/test_volume_predictor.py ...         [  6%]
458s tests/analysis/test_adsorption.py ......                                 [  7%]
460s tests/analysis/test_bond_dissociation.py ...                             [  7%]
460s tests/analysis/test_bond_valence.py ....                                 [  7%]
464s tests/analysis/test_chempot_diagram.py ...........                       [  7%]
464s tests/analysis/test_cost.py ....                                         [  8%]
470s tests/analysis/test_dimensionality.py ..........                         [  8%]
470s tests/analysis/test_disorder.py .                                        [  8%]
470s tests/analysis/test_energy_models.py ......                              [  8%]
470s tests/analysis/test_eos.py ......                                        [  8%]
470s tests/analysis/test_ewald.py ...                                         [  9%]
515s tests/analysis/test_fragmenter.py ..........                             [  9%]
515s tests/analysis/test_functional_groups.py ......                          [  9%]
530s tests/analysis/test_graphs.py ..s...............................         [ 10%]
530s tests/analysis/test_hhi.py .                                             [ 10%]
531s tests/analysis/test_interface_reactions.py ..................            [ 11%]
549s tests/analysis/test_local_env.py ....................................s.. [ 13%]
549s ...                                                                      [ 13%]
550s tests/analysis/test_molecule_matcher.py ................................ [ 14%]
551s ..........................                                               [ 15%]
551s tests/analysis/test_molecule_structure_comparator.py ....                [ 15%]
551s tests/analysis/test_nmr.py ......                                        [ 15%]
553s tests/analysis/test_phase_diagram.py ................................... [ 17%]
567s ..................................................                       [ 19%]
567s tests/analysis/test_piezo.py ...                                         [ 19%]
568s tests/analysis/test_piezo_sensitivity.py ..............                  [ 19%]
570s tests/analysis/test_pourbaix_diagram.py ..................               [ 20%]
584s tests/analysis/test_prototypes.py .                                      [ 20%]
585s tests/analysis/test_quasi_harmonic_debye_approx.py .............         [ 20%]
587s tests/analysis/test_quasirrho.py ......                                  [ 21%]
587s tests/analysis/test_reaction_calculator.py .....................         [ 21%]
606s tests/analysis/test_structure_analyzer.py .........                      [ 22%]
607s tests/analysis/test_structure_matcher.py .............................   [ 23%]
615s tests/analysis/test_surface_analysis.py ..............                   [ 23%]
640s tests/analysis/test_transition_state.py ...                              [ 24%]
641s tests/analysis/test_wulff.py .....                                       [ 24%]
641s tests/analysis/test_xps.py .                                             [ 24%]
652s tests/analysis/topological/test_spillage.py .                            [ 24%]
652s tests/analysis/xas/test_spectrum.py ...........                          [ 24%]
652s tests/apps/battery/test_analyzer.py ....                                 [ 24%]
653s tests/apps/battery/test_conversion_battery.py ...                        [ 25%]
653s tests/apps/battery/test_insertion_battery.py .........                   [ 25%]
653s tests/apps/battery/test_plotter.py ..                                    [ 25%]
653s tests/apps/borg/test_hive.py ........                                    [ 25%]
653s tests/apps/borg/test_queen.py ..                                         [ 25%]
653s tests/command_line/test_bader_caller.py ssss                             [ 25%]
653s tests/command_line/test_chargemol_caller.py ..                           [ 26%]
653s tests/command_line/test_critic2_caller.py ss..                           [ 26%]
653s tests/command_line/test_enumlib_caller.py sss                            [ 26%]
653s tests/command_line/test_gulp_caller.py sssssssssssssssssssssssssss       [ 27%]
653s tests/command_line/test_mcsqs_caller.py sssssss                          [ 27%]
653s tests/command_line/test_vampire_caller.py s                              [ 27%]
653s tests/core/test_bonds.py .......                                         [ 27%]
654s tests/core/test_composition.py ......................................... [ 29%]
654s ............                                                             [ 29%]
667s tests/core/test_interface.py ......................                      [ 30%]
667s tests/core/test_ion.py ...............                                   [ 31%]
668s tests/core/test_lattice.py ................................              [ 32%]
668s tests/core/test_libxcfunc.py ..                                          [ 32%]
668s tests/core/test_molecular_orbitals.py ....                               [ 32%]
668s tests/core/test_operations.py ...............                            [ 33%]
668s tests/core/test_periodic_table.py ...................................... [ 34%]
668s ...................                                                      [ 35%]
668s tests/core/test_settings.py .                                            [ 35%]
668s tests/core/test_sites.py ...................                             [ 36%]
668s tests/core/test_spectrum.py .....                                        [ 36%]
671s tests/core/test_structure.py ........................s.................. [ 38%]
689s .................ss.....................ssss............................ [ 40%]
689s ..................s.......s.......                                       [ 42%]
754s tests/core/test_surface.py .......................s....                  [ 43%]
762s tests/core/test_tensors.py ............................                  [ 44%]
808s tests/core/test_trajectory.py ................                           [ 44%]
808s tests/core/test_units.py ................                                [ 45%]
808s tests/core/test_xcfunc.py .                                              [ 45%]
816s tests/electronic_structure/test_bandstructure.py ....................... [ 46%]
824s .........                                                                [ 46%]
824s tests/electronic_structure/test_boltztrap.py sssssssssssssss             [ 47%]
824s tests/electronic_structure/test_boltztrap2.py ssssssssssssss             [ 47%]
860s tests/electronic_structure/test_cohp.py ..............................   [ 49%]
861s tests/electronic_structure/test_core.py ..........                       [ 49%]
873s tests/electronic_structure/test_dos.py .........................         [ 50%]
934s tests/electronic_structure/test_plotter.py ...............ssssssssssssss [ 51%]
934s sssss.....                                                               [ 51%]
935s tests/entries/test_compatibility.py .................................... [ 53%]
935s .................................................                        [ 55%]
936s tests/entries/test_computed_entries.py ................................. [ 56%]
936s ...                                                                      [ 56%]
938s tests/entries/test_correction_calculator.py ....                         [ 56%]
951s tests/entries/test_entry_tools.py .......                                [ 56%]
951s tests/entries/test_exp_entries.py ...                                    [ 56%]
952s tests/entries/test_mixing_scheme.py ...............................      [ 58%]
952s tests/ext/test_cod.py ss                                                 [ 58%]
953s tests/ext/test_matproj.py sssssssssssssssssssssssssssssssssssssssss      [ 59%]
984s tests/ext/test_optimade.py .....                                         [ 59%]
984s tests/io/abinit/test_abiobjects.py .........                             [ 60%]
984s tests/io/abinit/test_inputs.py ........                                  [ 60%]
984s tests/io/abinit/test_netcdf.py ..                                        [ 60%]
984s tests/io/abinit/test_pseudos.py .....                                    [ 60%]
984s tests/io/aims/test_aims_inputs.py ....                                   [ 61%]
984s tests/io/aims/test_aims_outputs.py ......                                [ 61%]
984s tests/io/aims/test_aims_parsers.py ..................................... [ 62%]
985s .......................................................                  [ 64%]
985s tests/io/cp2k/test_inputs.py ..............                              [ 65%]
985s tests/io/cp2k/test_outputs.py .......                                    [ 65%]
985s tests/io/exciting/test_inputs.py ....                                    [ 65%]
985s tests/io/feff/test_inputs.py ..................                          [ 66%]
985s tests/io/feff/test_outputs.py ......                                     [ 66%]
1002s tests/io/lammps/test_data.py .............................               [ 67%]
1002s tests/io/lammps/test_generators.py .                                     [ 67%]
1003s tests/io/lammps/test_inputs.py .....................                     [ 68%]
1003s tests/io/lammps/test_outputs.py ....                                     [ 68%]
1005s tests/io/lammps/test_utils.py ...                                        [ 68%]
1036s tests/io/lobster/test_inputs.py ........................................ [ 70%]
1047s ....................                                                     [ 71%]
1079s tests/io/lobster/test_lobsterenv.py .................                    [ 71%]
1079s tests/io/pwmat/test_inputs.py ..........                                 [ 72%]
1079s tests/io/qchem/test_inputs.py ...................................        [ 73%]
1111s tests/io/qchem/test_outputs.py .....................                     [ 74%]
1111s tests/io/qchem/test_utils.py ..                                          [ 74%]
1111s tests/io/test_adf.py ..............                                      [ 74%]
1112s tests/io/test_ase.py .....................s                              [ 75%]
1112s tests/io/test_atat.py ....                                               [ 75%]
1112s tests/io/test_babel.py ........                                          [ 76%]
1114s tests/io/test_cif.py ........s....................................       [ 77%]
1114s tests/io/test_common.py .                                                [ 77%]
1114s tests/io/test_core.py .........                                          [ 78%]
1114s tests/io/test_cssr.py ..                                                 [ 78%]
1114s tests/io/test_fiesta.py ..                                               [ 78%]
1115s tests/io/test_gaussian.py ................                               [ 79%]
1115s tests/io/test_jarvis.py ss                                               [ 79%]
1115s tests/io/test_lmto.py .....                                              [ 79%]
1117s tests/io/test_nwchem.py ............                                     [ 79%]
1136s tests/io/test_packmol.py .........                                       [ 80%]
1163s tests/io/test_phonopy.py ...........                                     [ 80%]
1163s tests/io/test_prismatic.py .                                             [ 80%]
1163s tests/io/test_pwscf.py ........                                          [ 80%]
1163s tests/io/test_res.py ...............                                     [ 81%]
1163s tests/io/test_template_input.py .                                        [ 81%]
1163s tests/io/test_wannier90.py ....                                          [ 81%]
1163s tests/io/test_xcrysden.py ....                                           [ 81%]
1163s tests/io/test_xr.py ..                                                   [ 81%]
1163s tests/io/test_xyz.py ........                                            [ 82%]
1163s tests/io/test_zeopp.py ssssssssss                                        [ 82%]
1164s tests/io/vasp/test_inputs.py ........................................... [ 84%]
1167s .............................                                            [ 85%]
1187s tests/io/vasp/test_optics.py ...                                         [ 85%]
1255s tests/io/vasp/test_outputs.py .......................................... [ 87%]
1309s .............................................................            [ 89%]
1309s tests/io/xtb/test_inputs.py ..                                           [ 89%]
1309s tests/optimization/test_linear_assignment.py ....                        [ 89%]
1309s tests/optimization/test_neighbors.py .                                   [ 89%]
1311s tests/phonon/test_bandstructure.py ...........                           [ 90%]
1311s tests/phonon/test_dos.py ................                                [ 90%]
1508s tests/phonon/test_gruneisen.py .............                             [ 91%]
1508s tests/phonon/test_ir_spectra.py .                                        [ 91%]
1518s tests/phonon/test_plotter.py ........                                    [ 91%]
1518s tests/phonon/test_thermal_displacements.py ..............                [ 92%]
1522s tests/symmetry/test_analyzer.py ................................         [ 93%]
1556s tests/symmetry/test_groups.py .....................                      [ 94%]
1556s tests/symmetry/test_kpath_hin.py ss                                      [ 94%]
1591s tests/symmetry/test_kpath_lm.py ...                                      [ 94%]
1607s tests/symmetry/test_kpath_sc.py ..                                       [ 94%]
1607s tests/symmetry/test_kpaths.py .s                                         [ 94%]
1608s tests/symmetry/test_maggroups.py ......                                  [ 94%]
1608s tests/symmetry/test_settings.py ....                                     [ 94%]
1608s tests/symmetry/test_site_symmetries.py .                                 [ 94%]
1624s tests/test_cli.py ...                                                    [ 94%]
1624s tests/test_pkg.py s                                                      [ 94%]
1625s tests/transformations/test_advanced_transformations.py .s..sssss..ssssss [ 95%]
1627s ss...ssssss...s                                                          [ 96%]
1627s tests/transformations/test_site_transformations.py ...........s......    [ 96%]
1627s tests/transformations/test_standard_transformations.py ............ssss. [ 97%]
1631s ...........                                                              [ 97%]
1631s tests/util/test_coord.py ......................                          [ 98%]
1631s tests/util/test_graph_hashing.py ss                                      [ 98%]
1632s tests/util/test_io.py .                                                  [ 98%]
1632s tests/util/test_num.py .                                                 [ 98%]
1632s tests/util/test_plotting.py ..                                           [ 98%]
1632s tests/util/test_provenance.py ........                                   [ 99%]
1632s tests/util/test_string.py ...........                                    [ 99%]
1632s tests/util/test_typing.py .....                                          [ 99%]
1633s tests/vis/test_plotters.py ...                                           [100%]
1633s 
1633s ============================= slowest 30 durations =============================
1633s 35.99s call     tests/electronic_structure/test_plotter.py::TestBSPlotterProjected::test_methods
1633s 35.51s call     tests/symmetry/test_kpath_lm.py::TestKPathLatimerMunro::test_kpath_generation
1633s 28.42s call     tests/analysis/test_fragmenter.py::TestFragmentMolecule::test_pc_then_ec_depth_10
1633s 25.88s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_plot
1633s 21.86s call     tests/ext/test_optimade.py::TestOptimade::test_update_aliases
1633s 20.03s call     tests/io/vasp/test_optics.py::TestVasprun::test_optics
1633s 18.40s call     tests/analysis/elasticity/test_elastic.py::TestElasticTensorExpansion::test_get_yield_stress
1633s 17.57s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_thermal_conductivity_slack
1633s 17.49s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_gruneisen
1633s 16.99s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_acoustic_debye_temp
1633s 16.90s call     tests/io/vasp/test_outputs.py::TestVasprun::test_runtype
1633s 16.88s call     tests/analysis/test_structure_analyzer.py::TestMiscFunction::test_average_coordination_number
1633s 16.72s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_frequencies
1633s 16.72s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_tdos
1633s 16.57s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_average_gruneisen
1633s 16.57s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_phdos
1633s 16.51s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_debye_temp_phonopy
1633s 16.49s call     tests/io/test_phonopy.py::TestGruneisen::test_gruneisen_parameter
1633s 16.14s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_as_from_dict
1633s 16.01s call     tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_multi
1633s 15.83s call     tests/core/test_surface.py::TestSlabGenerator::test_non_stoichiometric_symmetrized_slab
1633s 15.02s call     tests/symmetry/test_kpath_sc.py::TestBandStructureSC::test_kpath_generation
1633s 14.90s call     tests/symmetry/test_groups.py::TestSpaceGroup::test_order_symm_ops
1633s 14.06s call     tests/analysis/test_prototypes.py::TestAflowPrototypeMatcher::test_prototype_matching
1633s 13.14s call     tests/io/lobster/test_lobsterenv.py::TestLobsterNeighbors::test_get_info_cohps_to_neighbors
1633s 12.25s call     tests/entries/test_entry_tools.py::TestEntrySet::test_ground_states
1633s 11.90s call     tests/core/test_surface.py::TestSlab::test_symmetrization
1633s 11.19s call     tests/io/lobster/test_inputs.py::TestFatband::test_attributes
1633s 11.12s call     tests/io/test_packmol.py::TestPackmolSet::test_chdir_behavior
1633s 11.08s call     tests/core/test_trajectory.py::TestTrajectory::test_extend
1633s =========================== short test summary info ============================
1633s SKIPPED [1] tests/io/test_openff.py:25: could not import 'openff.toolkit': No module named 'openff'
1633s SKIPPED [1] tests/io/test_shengbte.py:11: could not import 'f90nml': No module named 'f90nml'
1633s SKIPPED [1] tests/analysis/magnetism/test_analyzer.py:255: enumlib not present
1633s SKIPPED [1] tests/analysis/test_graphs.py:341: graphviz executables not present
1633s SKIPPED [1] tests/analysis/test_local_env.py:1333: critic2 executable not present
1633s SKIPPED [1] tests/command_line/test_bader_caller.py:118: bader executable not present
1633s SKIPPED [1] tests/command_line/test_bader_caller.py:86: bader executable not present
1633s SKIPPED [1] tests/command_line/test_bader_caller.py:68: bader executable not present
1633s SKIPPED [1] tests/command_line/test_bader_caller.py:133: bader executable not present
1633s SKIPPED [1] tests/command_line/test_critic2_caller.py:26: critic2 executable not present
1633s SKIPPED [1] tests/command_line/test_critic2_caller.py:62: critic2 executable not present
1633s SKIPPED [1] tests/command_line/test_enumlib_caller.py:92: enum_lib not present.
1633s SKIPPED [1] tests/command_line/test_enumlib_caller.py:80: enum_lib not present.
1633s SKIPPED [1] tests/command_line/test_enumlib_caller.py:122: enum_lib not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:41: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:68: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:169: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:142: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:212: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:248: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:108: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:133: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:138: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:129: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:114: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:124: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:120: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:259: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:194: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:290: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:302: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:285: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:326: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:315: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:322: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:333: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:329: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:353: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:343: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:349: gulp not present.
1633s SKIPPED [1] tests/command_line/test_gulp_caller.py:356: gulp not present.
1633s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:63: mcsqs executable not present
1633s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:97: mcsqs executable not present
1633s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:28: mcsqs executable not present
1633s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:47: mcsqs executable not present
1633s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:55: mcsqs executable not present
1633s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:73: mcsqs executable not present
1633s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:85: mcsqs executable not present
1633s SKIPPED [1] tests/command_line/test_vampire_caller.py:35: vampire executable not present
1633s SKIPPED [1] tests/core/test_structure.py:91: enumlib or mcsqs executable not present
1633s SKIPPED [1] tests/core/test_structure.py:1696: could not import 'chgnet': No module named 'chgnet'
1633s SKIPPED [1] tests/core/test_structure.py:1761: TODO remove skip once https://github.com/materialsvirtuallab/matgl/issues/238 is resolved
1633s SKIPPED [1] tests/core/test_structure.py:1673: could not import 'chgnet': No module named 'chgnet'
1633s SKIPPED [1] tests/core/test_structure.py:1773: TODO remove skip once https://github.com/materialsvirtuallab/matgl/issues/238 is resolved
1633s SKIPPED [1] tests/core/test_structure.py:1784: TODO remove skip once https://github.com/materialsvirtuallab/matgl/issues/238 is resolved
1633s SKIPPED [1] tests/core/test_structure.py:1793: TODO remove skip once https://github.com/materialsvirtuallab/matgl/issues/238 is resolved
1633s SKIPPED [1] tests/core/test_structure.py:2400: Pytorch and TBLite clash. https://github.com/materialsproject/pymatgen/pull/3060
1633s SKIPPED [1] tests/core/test_structure.py:2410: Pytorch and TBLite clash. https://github.com/materialsproject/pymatgen/pull/3060
1633s SKIPPED [1] tests/core/test_surface.py:667: This test relies on neighbor orders and is hard coded. Disable temporarily
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:244: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:231: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:172: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:194: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:222: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:104: No FDINT
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:126: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:198: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:135: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:119: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:89: No FDINT
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:202: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:144: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:160: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:46: No x_trans.
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:79: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:60: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:98: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:93: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:127: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:124: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:119: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:166: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:151: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:181: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:193: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:285: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:254: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:311: No boltztrap2, skipping tests...
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:303: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:310: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:317: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:324: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:331: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:338: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:345: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:352: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:359: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:366: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:373: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:380: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:387: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:394: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:401: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:408: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:415: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:422: No x_trans executable found
1633s SKIPPED [1] tests/electronic_structure/test_plotter.py:429: No x_trans executable found
1633s SKIPPED [1] tests/ext/test_cod.py:24: No mysql
1633s SKIPPED [1] tests/ext/test_cod.py:29: No mysql
1633s SKIPPED [1] tests/ext/test_matproj.py:503: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:471: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:410: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:121: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:46: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:198: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:367: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:59: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:194: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:217: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:130: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:163: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:297: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:188: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:371: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:393: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:113: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:116: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:205: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:272: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:339: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:314: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:147: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:213: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:343: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:348: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:363: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:52: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:456: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:423: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:483: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:487: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:171: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:180: Legacy PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:521: PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:539: PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:621: PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:645: PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:649: PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:691: PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/ext/test_matproj.py:872: PMG_MAPI_KEY environment variable not set or MP API is down.
1633s SKIPPED [1] tests/io/test_ase.py:356: ase is present
1633s SKIPPED [1] tests/io/test_cif.py:284: non-free PF*.cif test files are not available
1633s SKIPPED [1] tests/io/test_jarvis.py:12: JARVIS-tools not loaded.
1633s SKIPPED [1] tests/io/test_jarvis.py:20: JARVIS-tools not loaded.
1633s SKIPPED [1] tests/io/test_zeopp.py:72: zeo not present
1633s SKIPPED [1] tests/io/test_zeopp.py:41: zeo not present
1633s SKIPPED [1] tests/io/test_zeopp.py:116: zeo not present
1633s SKIPPED [1] tests/io/test_zeopp.py:85: zeo not present
1633s SKIPPED [1] tests/io/test_zeopp.py:147: zeo not present
1633s SKIPPED [1] tests/io/test_zeopp.py:136: zeo not present
1633s SKIPPED [1] tests/io/test_zeopp.py:168: zeo not present
1633s SKIPPED [1] tests/io/test_zeopp.py:184: file free_sph.cif not present
1633s SKIPPED [1] tests/io/test_zeopp.py:207: zeo not present
1633s SKIPPED [1] tests/io/test_zeopp.py:228: zeo not present
1633s SKIPPED [1] tests/symmetry/test_kpath_hin.py:51: No seek path present.
1633s SKIPPED [1] tests/symmetry/test_kpath_hin.py:18: No seek path present.
1633s SKIPPED [1] tests/symmetry/test_kpaths.py:22: No seek path present.
1633s SKIPPED [1] tests/test_pkg.py:12: pymatgen.egg-info/SOURCES.txt not found. Run `pip install .` to create
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:99: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:160: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:190: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:206: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:233: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:245: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:360: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:300: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:338: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:330: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:348: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:488: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:536: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:545: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:603: mcsqs not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:613: mcsqs not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:634: mcsqs not present.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:666: icet not installed.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:652: icet not installed.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:677: icet not installed.
1633s SKIPPED [1] tests/transformations/test_advanced_transformations.py:784: hiphive not present
1633s SKIPPED [1] tests/transformations/test_site_transformations.py:213: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_standard_transformations.py:221: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_standard_transformations.py:235: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_standard_transformations.py:246: enum_lib not present.
1633s SKIPPED [1] tests/transformations/test_standard_transformations.py:252: enum_lib not present.
1633s SKIPPED [1] tests/util/test_graph_hashing.py:44: could not import 'emmet.core.graph_hashing': No module named 'emmet.core.graph_hashing'
1633s SKIPPED [1] tests/util/test_graph_hashing.py:61: could not import 'emmet.core.graph_hashing': No module named 'emmet.core.graph_hashing'
1633s ======== 2432 passed, 196 skipped, 298 deselected in 1343.68s (0:22:23) ========
1633s ..tot conformations = 3
1633s ..tot confs tested = 3
1633s ..below energy threshold = 3
1637s autopkgtest [03:04:25]: test test-pymatgen: -----------------------]
1638s test-pymatgen        PASS
1638s autopkgtest [03:04:26]: test test-pymatgen:  - - - - - - - - - - results - - - - - - - - - -
1638s autopkgtest [03:04:26]: test test-pymatgen-net: preparing testbed
1709s autopkgtest [03:05:37]: testbed dpkg architecture: arm64
1709s autopkgtest [03:05:37]: testbed apt version: 2.9.8
1709s autopkgtest [03:05:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup
1711s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
1711s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B]
1711s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB]
1711s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB]
1711s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1030 kB]
1711s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [164 kB]
1711s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB]
1711s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [773 kB]
1711s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [6116 B]
1711s Fetched 2220 kB in 1s (2491 kB/s)
1711s Reading package lists...
1713s Reading package lists...
1713s Building dependency tree...
1713s Reading state information...
1714s Calculating upgrade...
1714s The following packages will be upgraded:
1714s   firmware-sof-signed libcap-ng0 libexpat1 lxd-installer man-db pastebinit
1714s   python3-systemd xfsprogs
1714s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1714s Need to get 9481 kB of archives.
1714s After this operation, 549 kB of additional disk space will be used.
1714s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 firmware-sof-signed all 2024.06-1ubuntu2 [7083 kB]
1715s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libcap-ng0 arm64 0.8.5-3build1 [15.0 kB]
1715s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libexpat1 arm64 2.6.4-1 [76.6 kB]
1715s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 man-db arm64 2.13.0-1 [1320 kB]
1715s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 lxd-installer all 9 [5084 B]
1715s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 pastebinit all 1.7.1-1 [14.9 kB]
1715s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-systemd arm64 235-1build5 [46.7 kB]
1715s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 xfsprogs arm64 6.8.0-2.2ubuntu2 [919 kB]
1716s Preconfiguring packages ...
1716s Fetched 9481 kB in 1s (9644 kB/s)
1716s (Reading database ... 
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(Reading database ... 75%
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 79925 files and directories currently installed.)
1716s Preparing to unpack .../firmware-sof-signed_2024.06-1ubuntu2_all.deb ...
1716s Unpacking firmware-sof-signed (2024.06-1ubuntu2) over (2024.06-1ubuntu1) ...
1716s Preparing to unpack .../libcap-ng0_0.8.5-3build1_arm64.deb ...
1716s Unpacking libcap-ng0:arm64 (0.8.5-3build1) over (0.8.5-1) ...
1716s Setting up libcap-ng0:arm64 (0.8.5-3build1) ...
1716s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 79951 files and directories currently installed.)
1716s Preparing to unpack .../0-libexpat1_2.6.4-1_arm64.deb ...
1716s Unpacking libexpat1:arm64 (2.6.4-1) over (2.6.2-2) ...
1716s Preparing to unpack .../1-man-db_2.13.0-1_arm64.deb ...
1716s Unpacking man-db (2.13.0-1) over (2.12.1-3) ...
1716s Preparing to unpack .../2-lxd-installer_9_all.deb ...
1716s Unpacking lxd-installer (9) over (8) ...
1716s Preparing to unpack .../3-pastebinit_1.7.1-1_all.deb ...
1716s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ...
1717s Preparing to unpack .../4-python3-systemd_235-1build5_arm64.deb ...
1717s Unpacking python3-systemd (235-1build5) over (235-1build4) ...
1717s Preparing to unpack .../5-xfsprogs_6.8.0-2.2ubuntu2_arm64.deb ...
1717s Unpacking xfsprogs (6.8.0-2.2ubuntu2) over (6.8.0-2.2ubuntu1) ...
1717s Setting up libexpat1:arm64 (2.6.4-1) ...
1717s Setting up firmware-sof-signed (2024.06-1ubuntu2) ...
1717s Setting up pastebinit (1.7.1-1) ...
1717s Setting up man-db (2.13.0-1) ...
1717s Updating database of manual pages ...
1719s man-db.service is a disabled or a static unit not running, not starting it.
1719s Setting up xfsprogs (6.8.0-2.2ubuntu2) ...
1719s update-initramfs: deferring update (trigger activated)
1720s Setting up lxd-installer (9) ...
1720s Setting up python3-systemd (235-1build5) ...
1720s Processing triggers for libc-bin (2.40-1ubuntu3) ...
1720s Processing triggers for initramfs-tools (0.142ubuntu34) ...
1720s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
1720s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
1737s System running in EFI mode, skipping.
1737s Reading package lists...
1737s Building dependency tree...
1737s Reading state information...
1738s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1739s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
1739s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
1739s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
1739s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
1740s Reading package lists...
1740s Reading package lists...
1740s Building dependency tree...
1740s Reading state information...
1741s Calculating upgrade...
1741s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1741s Reading package lists...
1742s Building dependency tree...
1742s Reading state information...
1742s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1742s autopkgtest [03:06:10]: rebooting testbed after setup commands that affected boot
1746s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
1776s Reading package lists...
1777s Building dependency tree...
1777s Reading state information...
1777s Starting pkgProblemResolver with broken count: 0
1777s Starting 2 pkgProblemResolver with broken count: 0
1777s Done
1778s The following additional packages will be installed:
1778s   autoconf automake autopoint autotools-dev blt build-essential cpp cpp-14
1778s   cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 debhelper debugedit
1778s   dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz
1778s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
1778s   fonts-font-awesome fonts-glyphicons-halflings fonts-lato fonts-lyx
1778s   fonts-mathjax g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
1778s   gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gettext
1778s   intltool-debian libaec0 libamd-comgr2 libamdhip64-5 libarchive-zip-perl
1778s   libasan8 libblas3 libboost-iostreams1.83.0 libcairo2 libcc1-0
1778s   libdebhelper-perl libdeflate0 libdouble-conversion3 libdrm-amdgpu1
1778s   libdrm-radeon1 libegl-mesa0 libegl1 libevent-pthreads-2.1-7t64 libexpat1-dev
1778s   libfabric1 libfile-stripnondeterminism-perl libfontconfig1 libgbm1
1778s   libgcc-14-dev libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 libglapi-mesa
1778s   libglew2.2 libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3
1778s   libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libhsa-runtime64-1
1778s   libhsakmt1 libhwasan0 libhwloc-plugins libhwloc15 libibmad5 libibumad3
1778s   libice6 libimagequant0 libinchi1 libinput-bin libinput10 libisl23 libitm1
1778s   libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery
1778s   libjs-jquery-ui libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-perl
1778s   libjsoncpp25 liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libllvm17t64 liblsan0
1778s   liblzf1 libmaeparser1 libmd4c0 libmpc3 libmtdev1t64 libmunge2 libnetcdf19t64
1778s   libogg0 libopenbabel7 libopengl0 libopenjp2-7 libopenmpi3t64 libpciaccess0
1778s   libpcre2-16-0 libpixman-1-0 libpmix2t64 libproj25 libpython3-all-dev
1778s   libpython3-dev libpython3.12-dev libqhull-r8.0 libqt5core5t64 libqt5dbus5t64
1778s   libqt5gui5t64 libqt5network5t64 libqt5widgets5t64 libraqm0 librdmacm1t64
1778s   libsharpyuv0 libsm6 libstdc++-14-dev libsymspg2 libsz2 libtbb12
1778s   libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtheora0 libtiff6 libtk8.6 libtool
1778s   libtsan2 libubsan1 libucx0 libvtk9.3 libvtk9.3-qt libvulkan1 libwacom-common
1778s   libwacom9 libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2
1778s   libwebpmux3 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
1778s   libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0
1778s   libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1
1778s   libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1
1778s   libxfixes3 libxft2 libxkbcommon-x11-0 libxnvctrl0 libxrender1 libxshmfence1
1778s   libxslt1.1 libxss1 libxxf86vm1 m4 mesa-libgallium mpi-default-bin
1778s   ocl-icd-libopencl1 openmpi-bin openmpi-common packmol po-debconf proj-data
1778s   pybuild-plugin-pyproject pymatgen-test-files python-matplotlib-data
1778s   python-pymatgen-doc python3-alabaster python3-all python3-all-dev
1778s   python3-annotated-types python3-appdirs python3-ase python3-brotli
1778s   python3-bs4 python3-bson python3-build python3-cftime python3-contourpy
1778s   python3-cycler python3-dateutil python3-decorator python3-defusedxml
1778s   python3-dev python3-dnspython python3-docutils python3-dotenv
1778s   python3-email-validator python3-emmet-core python3-fastjsonschema
1778s   python3-fonttools python3-frozendict python3-fs python3-h5py
1778s   python3-h5py-serial python3-imagesize python3-iniconfig python3-installer
1778s   python3-joblib python3-jupyter-core python3-kiwisolver python3-latexcodec
1778s   python3-lxml python3-lz4 python3-matplotlib python3-monty python3-mpi4py
1778s   python3-mpmath python3-nbformat python3-netcdf4 python3-networkx
1778s   python3-numpy python3-openbabel python3-packaging python3-palettable
1778s   python3-pandas python3-pandas-lib python3-phonopy python3-pil
1778s   python3-pil.imagetk python3-platformdirs python3-plotly python3-pluggy
1778s   python3-pybtex python3-pydantic python3-pydantic-core
1778s   python3-pydantic-settings python3-pymatgen python3-pyproject-hooks
1778s   python3-pytest python3-roman python3-ruamel.yaml python3-ruamel.yaml.clib
1778s   python3-scipy python3-six python3-snowballstemmer python3-soupsieve
1778s   python3-spglib python3-sphinx python3-sphinx-rtd-theme
1778s   python3-sphinxcontrib.jquery python3-sympy python3-tabulate python3-tenacity
1778s   python3-tk python3-toml python3-tqdm python3-traitlets python3-tz
1778s   python3-ufolib2 python3-uncertainties python3-unicodedata2 python3-vtk9
1778s   python3-wheel python3.12-dev python3.12-tk sgml-base sphinx-common
1778s   sphinx-rtd-theme-common tk8.6-blt2.5 unicode-data x11-common xml-core
1778s   zlib1g-dev
1778s Suggested packages:
1778s   autoconf-archive gnu-standards autoconf-doc blt-demo cpp-doc gcc-14-locales
1778s   cpp-14-doc cython-doc dh-make flit gcc-14-doc gcc-multilib manpages-dev flex
1778s   bison gdb gcc-doc gdb-aarch64-linux-gnu gettext-doc libasprintf-dev
1778s   libgettextpo-dev glew-utils libjs-jquery-ui-docs fonts-mathjax-extras
1778s   fonts-stix libjs-mathjax-doc liblcms2-utils proj-bin libthai0
1778s   qgnomeplatform-qt5 qt5-image-formats-plugins libstdc++-14-doc tcl8.6 tk8.6
1778s   libtool-doc gfortran | fortran95-compiler gcj-jdk vtk9-doc vtk9-examples
1778s   libwacom-bin m4-doc opencl-icd gfortran | fortran-compiler libmail-box-perl
1778s   python-ase-doc python3-pycodcif python3-pip python3-venv python-build-doc
1778s   python-cycler-doc python3-trio python3-aioquic python3-h2 python3-httpx
1778s   python3-httpcore docutils-doc fonts-linuxlibertine | ttf-linux-libertine
1778s   texlive-lang-french texlive-latex-base texlive-latex-recommended
1778s   python-fastjsonschema-doc python-h5py-doc python-installer-doc
1778s   python-joblib-doc python-latexcodec-doc python-lxml-doc cm-super-minimal
1778s   dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3
1778s   librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi-cairo
1778s   python3-gobject python3-pyqt5 python3-sip python3-tornado
1778s   texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2
1778s   python3-gdal python3-pydot python3-pygraphviz gfortran python-numpy-doc
1778s   python-pandas-doc python3-statsmodels python-pil-doc python3-ipykernel
1778s   python-pybtex-doc python3-mp-api python-scipy-doc python3-stemmer dvisvgm
1778s   fonts-freefont-otf imagemagick-6.q16 latexmk sphinx-doc tex-gyre
1778s   texlive-fonts-extra texlive-fonts-recommended texlive-plain-generic
1778s   python-sympy-doc python-tenacity-doc tix python3-tk-dbg python3.13-tk
1778s   python-traitlets-doc python-uncertainties-doc mayavi2 sgml-base-doc
1778s Recommended packages:
1778s   libarchive-cpio-perl libgl1-amber-dri javascript-common libjson-xs-perl
1778s   qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme qtwayland5 libltdl-dev
1778s   mesa-vulkan-drivers | vulkan-icd tcl libmail-sendmail-perl python3-bson-ext
1778s   libpaper-utils python3-simplejson python3-psutil python3-cssselect
1778s   python3-html5lib python-monty-doc python3-torch python3-bottleneck
1778s   python3-numexpr python3-odf python3-openpyxl python3-tables python3-olefile
1778s   python3-tomli isympy-common
1778s The following NEW packages will be installed:
1778s   autoconf automake autopkgtest-satdep autopoint autotools-dev blt
1778s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
1778s   cython3 debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism
1778s   docutils-common dwz fontconfig fontconfig-config fonts-dejavu-core
1778s   fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings fonts-lato
1778s   fonts-lyx fonts-mathjax g++ g++-14 g++-14-aarch64-linux-gnu
1778s   g++-aarch64-linux-gnu gcc gcc-14 gcc-14-aarch64-linux-gnu
1778s   gcc-aarch64-linux-gnu gettext intltool-debian libaec0 libamd-comgr2
1778s   libamdhip64-5 libarchive-zip-perl libasan8 libblas3 libboost-iostreams1.83.0
1778s   libcairo2 libcc1-0 libdebhelper-perl libdeflate0 libdouble-conversion3
1778s   libdrm-amdgpu1 libdrm-radeon1 libegl-mesa0 libegl1
1778s   libevent-pthreads-2.1-7t64 libexpat1-dev libfabric1
1778s   libfile-stripnondeterminism-perl libfontconfig1 libgbm1 libgcc-14-dev
1778s   libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libglew2.2
1778s   libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b
1778s   libhdf5-103-1t64 libhdf5-hl-100t64 libhsa-runtime64-1 libhsakmt1 libhwasan0
1778s   libhwloc-plugins libhwloc15 libibmad5 libibumad3 libice6 libimagequant0
1778s   libinchi1 libinput-bin libinput10 libisl23 libitm1 libjbig0 libjpeg-turbo8
1778s   libjpeg8 libjs-bootstrap libjs-jquery libjs-jquery-ui libjs-mathjax
1778s   libjs-sphinxdoc libjs-underscore libjson-perl libjsoncpp25 liblapack3
1778s   liblbfgsb0 liblcms2-2 liblerc4 libllvm17t64 liblsan0 liblzf1 libmaeparser1
1778s   libmd4c0 libmpc3 libmtdev1t64 libmunge2 libnetcdf19t64 libogg0 libopenbabel7
1778s   libopengl0 libopenjp2-7 libopenmpi3t64 libpciaccess0 libpcre2-16-0
1778s   libpixman-1-0 libpmix2t64 libproj25 libpython3-all-dev libpython3-dev
1778s   libpython3.12-dev libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5gui5t64
1778s   libqt5network5t64 libqt5widgets5t64 libraqm0 librdmacm1t64 libsharpyuv0
1778s   libsm6 libstdc++-14-dev libsymspg2 libsz2 libtbb12 libtbbbind-2-5
1778s   libtbbmalloc2 libtcl8.6 libtheora0 libtiff6 libtk8.6 libtool libtsan2
1778s   libubsan1 libucx0 libvtk9.3 libvtk9.3-qt libvulkan1 libwacom-common
1778s   libwacom9 libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2
1778s   libwebpmux3 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
1778s   libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0
1778s   libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1
1778s   libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1
1778s   libxfixes3 libxft2 libxkbcommon-x11-0 libxnvctrl0 libxrender1 libxshmfence1
1778s   libxslt1.1 libxss1 libxxf86vm1 m4 mesa-libgallium mpi-default-bin
1778s   ocl-icd-libopencl1 openmpi-bin openmpi-common packmol po-debconf proj-data
1778s   pybuild-plugin-pyproject pymatgen-test-files python-matplotlib-data
1778s   python-pymatgen-doc python3-alabaster python3-all python3-all-dev
1778s   python3-annotated-types python3-appdirs python3-ase python3-brotli
1778s   python3-bs4 python3-bson python3-build python3-cftime python3-contourpy
1778s   python3-cycler python3-dateutil python3-decorator python3-defusedxml
1778s   python3-dev python3-dnspython python3-docutils python3-dotenv
1778s   python3-email-validator python3-emmet-core python3-fastjsonschema
1778s   python3-fonttools python3-frozendict python3-fs python3-h5py
1778s   python3-h5py-serial python3-imagesize python3-iniconfig python3-installer
1778s   python3-joblib python3-jupyter-core python3-kiwisolver python3-latexcodec
1778s   python3-lxml python3-lz4 python3-matplotlib python3-monty python3-mpi4py
1778s   python3-mpmath python3-nbformat python3-netcdf4 python3-networkx
1778s   python3-numpy python3-openbabel python3-packaging python3-palettable
1778s   python3-pandas python3-pandas-lib python3-phonopy python3-pil
1778s   python3-pil.imagetk python3-platformdirs python3-plotly python3-pluggy
1778s   python3-pybtex python3-pydantic python3-pydantic-core
1778s   python3-pydantic-settings python3-pymatgen python3-pyproject-hooks
1778s   python3-pytest python3-roman python3-ruamel.yaml python3-ruamel.yaml.clib
1778s   python3-scipy python3-six python3-snowballstemmer python3-soupsieve
1778s   python3-spglib python3-sphinx python3-sphinx-rtd-theme
1778s   python3-sphinxcontrib.jquery python3-sympy python3-tabulate python3-tenacity
1778s   python3-tk python3-toml python3-tqdm python3-traitlets python3-tz
1778s   python3-ufolib2 python3-uncertainties python3-unicodedata2 python3-vtk9
1778s   python3-wheel python3.12-dev python3.12-tk sgml-base sphinx-common
1778s   sphinx-rtd-theme-common tk8.6-blt2.5 unicode-data x11-common xml-core
1778s   zlib1g-dev
1778s 0 upgraded, 298 newly installed, 0 to remove and 0 not upgraded.
1778s Need to get 516 MB/516 MB of archives.
1778s After this operation, 1998 MB of additional disk space will be used.
1778s Get:1 /tmp/autopkgtest.9Td4bJ/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [1136 B]
1778s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-lato all 2.015-1 [2781 kB]
1779s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 sgml-base all 1.31 [11.4 kB]
1779s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 m4 arm64 1.4.19-4build1 [240 kB]
1779s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 autoconf all 2.72-3 [382 kB]
1779s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 autotools-dev all 20220109.1 [44.9 kB]
1779s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 automake all 1:1.16.5-1.3ubuntu1 [558 kB]
1779s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 autopoint all 0.22.5-2 [616 kB]
1779s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [987 kB]
1779s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
1779s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
1779s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB]
1779s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB]
1779s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
1779s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
1779s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
1779s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
1779s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.15-1 [774 kB]
1779s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7build1 [618 kB]
1779s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 blt arm64 2.5.3+dfsg-7build1 [4840 B]
1779s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libisl23 arm64 0.27-1 [676 kB]
1779s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
1779s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [10.6 MB]
1779s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-14 arm64 14.2.0-8ubuntu1 [1028 B]
1779s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [5452 B]
1779s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 cpp arm64 4:14.1.0-2ubuntu1 [22.5 kB]
1779s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libcc1-0 arm64 14.2.0-8ubuntu1 [49.7 kB]
1779s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB]
1779s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libitm1 arm64 14.2.0-8ubuntu1 [27.8 kB]
1779s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libasan8 arm64 14.2.0-8ubuntu1 [2893 kB]
1780s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsan0 arm64 14.2.0-8ubuntu1 [1283 kB]
1780s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libtsan2 arm64 14.2.0-8ubuntu1 [2686 kB]
1780s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libubsan1 arm64 14.2.0-8ubuntu1 [1151 kB]
1780s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libhwasan0 arm64 14.2.0-8ubuntu1 [1598 kB]
1780s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libgcc-14-dev arm64 14.2.0-8ubuntu1 [2594 kB]
1780s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [20.9 MB]
1780s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-14 arm64 14.2.0-8ubuntu1 [518 kB]
1780s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [1200 B]
1780s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 gcc arm64 4:14.1.0-2ubuntu1 [4994 B]
1780s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libstdc++-14-dev arm64 14.2.0-8ubuntu1 [2476 kB]
1780s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8ubuntu1 [12.1 MB]
1781s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-14 arm64 14.2.0-8ubuntu1 [19.9 kB]
1781s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2ubuntu1 [958 B]
1781s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 g++ arm64 4:14.1.0-2ubuntu1 [1080 B]
1781s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
1781s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 cython3 arm64 3.0.11+dfsg-1ubuntu2 [2977 kB]
1781s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libdebhelper-perl all 13.20ubuntu1 [94.2 kB]
1781s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libtool all 2.4.7-7build1 [166 kB]
1781s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 dh-autoreconf all 20 [16.1 kB]
1781s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB]
1781s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB]
1781s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 dh-strip-nondeterminism all 1.14.0-1 [5058 B]
1781s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 debugedit arm64 1:5.1-1 [45.9 kB]
1781s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 dwz arm64 0.15-1build6 [113 kB]
1781s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 gettext arm64 0.22.5-2 [930 kB]
1781s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 intltool-debian all 0.35.0+20060710.6 [23.2 kB]
1781s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 po-debconf all 1.0.21+nmu1 [233 kB]
1781s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 debhelper all 13.20ubuntu1 [893 kB]
1781s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 dh-python all 6.20241024 [112 kB]
1781s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 xml-core all 0.19 [20.3 kB]
1781s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 docutils-common all 0.21.2+dfsg-2 [131 kB]
1781s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB]
1781s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
1781s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
1781s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-lyx all 2.4.2.1-1 [171 kB]
1781s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
1781s Get:67 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB]
1781s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 libllvm17t64 arm64 1:17.0.6-18 [24.9 MB]
1782s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB]
1782s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [20.9 kB]
1782s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB]
1782s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB]
1782s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamdhip64-5 arm64 5.7.1-5 [9704 kB]
1782s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB]
1782s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost-iostreams1.83.0 arm64 1.83.0-3.2ubuntu2 [259 kB]
1782s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
1782s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
1782s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
1782s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB]
1782s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB]
1782s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdouble-conversion3 arm64 3.3.0-1build1 [38.0 kB]
1782s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.123-1 [20.8 kB]
1782s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB]
1782s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB]
1782s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB]
1782s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.10-2 [8020 B]
1782s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B]
1782s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B]
1782s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B]
1782s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B]
1782s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB]
1782s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B]
1782s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB]
1782s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB]
1782s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB]
1782s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 libegl-mesa0 arm64 24.2.3-1ubuntu1 [129 kB]
1782s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B]
1782s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 libexpat1-dev arm64 2.6.4-1 [129 kB]
1782s Get:99 http://ftpmaster.internal/ubuntu plucky/main arm64 librdmacm1t64 arm64 52.0-2ubuntu1 [71.5 kB]
1782s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfabric1 arm64 1.17.0-3ubuntu1 [542 kB]
1782s Get:101 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB]
1782s Get:102 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.296.0-1 [153 kB]
1783s Get:103 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB]
1783s Get:104 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB]
1783s Get:105 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB]
1783s Get:106 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB]
1783s Get:107 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B]
1783s Get:108 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB]
1783s Get:109 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB]
1783s Get:110 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB]
1783s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgl2ps1.4 arm64 1.4.2+dfsg1-2build1 [40.6 kB]
1783s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 libglew2.2 arm64 2.2.0-4build1 [191 kB]
1783s Get:113 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
1783s Get:114 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.0.1-1 [487 kB]
1783s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B]
1783s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB]
1783s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB]
1783s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc15 arm64 2.11.2-1 [162 kB]
1783s Get:119 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
1783s Get:120 http://ftpmaster.internal/ubuntu plucky/main arm64 libimagequant0 arm64 2.18.0-1build1 [37.1 kB]
1783s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 libinchi1 arm64 1.03+dfsg-4build1 [451 kB]
1783s Get:122 http://ftpmaster.internal/ubuntu plucky/main arm64 libwacom-common all 2.13.0-1 [98.6 kB]
1783s Get:123 http://ftpmaster.internal/ubuntu plucky/main arm64 libwacom9 arm64 2.13.0-1 [25.2 kB]
1783s Get:124 http://ftpmaster.internal/ubuntu plucky/main arm64 libinput-bin arm64 1.26.2-1 [22.8 kB]
1783s Get:125 http://ftpmaster.internal/ubuntu plucky/main arm64 libmtdev1t64 arm64 1.1.6-1.2 [14.4 kB]
1783s Get:126 http://ftpmaster.internal/ubuntu plucky/main arm64 libinput10 arm64 1.26.2-1 [132 kB]
1783s Get:127 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB]
1783s Get:128 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
1783s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
1783s Get:130 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
1783s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
1783s Get:132 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB]
1783s Get:133 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-sphinxdoc all 7.4.7-4 [158 kB]
1783s Get:134 http://ftpmaster.internal/ubuntu plucky/main arm64 libjson-perl all 4.10000-1 [81.9 kB]
1783s Get:135 http://ftpmaster.internal/ubuntu plucky/main arm64 libjsoncpp25 arm64 1.9.5-6build1 [78.2 kB]
1783s Get:136 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB]
1783s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB]
1783s Get:138 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB]
1783s Get:139 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB]
1783s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B]
1783s Get:141 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaeparser1 arm64 1.3.1-1build1 [84.5 kB]
1783s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmd4c0 arm64 0.5.2-2 [42.4 kB]
1783s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnetcdf19t64 arm64 1:4.9.2-6ubuntu1 [466 kB]
1783s Get:144 http://ftpmaster.internal/ubuntu plucky/main arm64 libogg0 arm64 1.3.5-3build1 [22.6 kB]
1783s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 libopenbabel7 arm64 3.1.1+dfsg-11ubuntu1 [3178 kB]
1784s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmunge2 arm64 0.5.15-4build1 [14.9 kB]
1784s Get:147 http://ftpmaster.internal/ubuntu plucky/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB]
1784s Get:148 http://ftpmaster.internal/ubuntu plucky/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB]
1784s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB]
1784s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc-plugins arm64 2.11.2-1 [15.8 kB]
1784s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpmix2t64 arm64 5.0.3-2 [662 kB]
1784s Get:152 http://ftpmaster.internal/ubuntu plucky/main arm64 libibumad3 arm64 52.0-2ubuntu1 [29.3 kB]
1784s Get:153 http://ftpmaster.internal/ubuntu plucky/main arm64 libibmad5 arm64 52.0-2ubuntu1 [43.1 kB]
1784s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 libucx0 arm64 1.17.0+ds-3build1 [1093 kB]
1784s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 libopenmpi3t64 arm64 4.1.6-13.3ubuntu2 [2487 kB]
1784s Get:156 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu3 [200 kB]
1784s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 proj-data all 9.5.0-1 [7919 kB]
1784s Get:158 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
1784s Get:159 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB]
1784s Get:160 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB]
1784s Get:161 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB]
1784s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 libproj25 arm64 9.5.0-1 [1339 kB]
1784s Get:163 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
1784s Get:164 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.12-dev arm64 3.12.7-3 [5565 kB]
1784s Get:165 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3-dev arm64 3.12.6-0ubuntu1 [10.2 kB]
1784s Get:166 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3-all-dev arm64 3.12.6-0ubuntu1 [916 B]
1784s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB]
1784s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5core5t64 arm64 5.15.15+dfsg-1ubuntu1 [1997 kB]
1784s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5dbus5t64 arm64 5.15.15+dfsg-1ubuntu1 [221 kB]
1784s Get:170 http://ftpmaster.internal/ubuntu plucky/main arm64 libegl1 arm64 1.7.0-1build1 [29.5 kB]
1784s Get:171 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5network5t64 arm64 5.15.15+dfsg-1ubuntu1 [735 kB]
1784s Get:172 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
1784s Get:173 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-icccm4 arm64 0.4.2-1 [10.9 kB]
1784s Get:174 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-util1 arm64 0.4.0-1build3 [10.7 kB]
1784s Get:175 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-image0 arm64 0.4.0-2build1 [10.8 kB]
1784s Get:176 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-keysyms1 arm64 0.4.0-1build4 [7984 B]
1784s Get:177 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render-util0 arm64 0.3.9-1build4 [9648 B]
1784s Get:178 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shape0 arm64 1.17.0-2 [6246 B]
1784s Get:179 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xinerama0 arm64 1.17.0-2 [5590 B]
1784s Get:180 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xinput0 arm64 1.17.0-2 [34.2 kB]
1784s Get:181 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xkb1 arm64 1.17.0-2 [32.5 kB]
1784s Get:182 http://ftpmaster.internal/ubuntu plucky/main arm64 libxkbcommon-x11-0 arm64 1.6.0-1build1 [13.6 kB]
1784s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5gui5t64 arm64 5.15.15+dfsg-1ubuntu1 [3679 kB]
1785s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqt5widgets5t64 arm64 5.15.15+dfsg-1ubuntu1 [2567 kB]
1785s Get:185 http://ftpmaster.internal/ubuntu plucky/main arm64 libraqm0 arm64 0.10.1-1build1 [14.7 kB]
1785s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsymspg2 arm64 2.4.0-1ubuntu1 [209 kB]
1785s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtbbmalloc2 arm64 2021.12.0-1ubuntu2 [38.5 kB]
1785s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtbbbind-2-5 arm64 2021.12.0-1ubuntu2 [14.9 kB]
1785s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtbb12 arm64 2021.12.0-1ubuntu2 [68.1 kB]
1785s Get:190 http://ftpmaster.internal/ubuntu plucky/main arm64 libtheora0 arm64 1.1.1+dfsg.1-17 [227 kB]
1785s Get:191 http://ftpmaster.internal/ubuntu plucky/main arm64 libopengl0 arm64 1.7.0-1build1 [35.1 kB]
1785s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 libvtk9.3 arm64 9.3.0+dfsg1-1build1 [24.0 MB]
1786s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 libvtk9.3-qt arm64 9.3.0+dfsg1-1build1 [183 kB]
1786s Get:194 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebpdemux2 arm64 1.4.0-0.1 [12.3 kB]
1786s Get:195 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebpmux3 arm64 1.4.0-0.1 [25.1 kB]
1786s Get:196 http://ftpmaster.internal/ubuntu plucky/main arm64 libxslt1.1 arm64 1.1.39-0exp1ubuntu1 [167 kB]
1786s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 openmpi-common all 4.1.6-13.3ubuntu2 [170 kB]
1786s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 openmpi-bin arm64 4.1.6-13.3ubuntu2 [114 kB]
1786s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 packmol arm64 1:20.14.3-1 [113 kB]
1786s Get:200 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB]
1786s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pyproject-hooks all 1.2.0-1 [10.2 kB]
1786s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-toml all 0.10.2-1 [16.5 kB]
1786s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-wheel all 0.44.0-1 [54.2 kB]
1786s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-build all 1.2.2-1 [31.0 kB]
1786s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-installer all 0.7.0+dfsg1-3 [17.4 kB]
1786s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 pybuild-plugin-pyproject all 6.20241024 [1728 B]
1786s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 pymatgen-test-files all 2024.10.29-1 [213 MB]
1792s Get:208 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python-matplotlib-data all 3.8.3-3ubuntu1 [2928 kB]
1792s Get:209 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
1792s Get:210 http://ftpmaster.internal/ubuntu plucky/main arm64 sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1012 kB]
1792s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 python-pymatgen-doc all 2024.6.10+dfsg1-8 [1107 kB]
1792s Get:212 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all arm64 3.12.6-0ubuntu1 [886 B]
1792s Get:213 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-dev arm64 3.12.7-3 [505 kB]
1793s Get:214 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dev arm64 3.12.6-0ubuntu1 [26.7 kB]
1793s Get:215 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all-dev arm64 3.12.6-0ubuntu1 [908 B]
1793s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-annotated-types all 0.7.0-1 [19.4 kB]
1793s Get:217 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB]
1793s Get:218 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB]
1793s Get:219 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB]
1793s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB]
1793s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-spglib arm64 2.4.0-1ubuntu1 [29.5 kB]
1793s Get:222 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-six all 1.16.0-7 [13.1 kB]
1793s Get:223 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dateutil all 2.9.0-2 [80.3 kB]
1793s Get:224 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu1 [182 kB]
1793s Get:225 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-pil arm64 10.4.0-1ubuntu1 [456 kB]
1793s Get:226 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-tk arm64 3.12.7-3 [115 kB]
1793s Get:227 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tk arm64 3.12.6-1ubuntu1 [9806 B]
1793s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pil.imagetk arm64 10.4.0-1ubuntu1 [9504 B]
1793s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-contourpy arm64 1.3.0-2 [179 kB]
1793s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-cycler all 0.12.1-1 [9716 B]
1793s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-brotli arm64 1.1.0-2build2 [340 kB]
1793s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB]
1793s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-mpmath all 1.3.0-1 [425 kB]
1793s Get:234 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sympy all 1.13.3-1 [4228 kB]
1793s Get:235 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tz all 2024.1-2 [31.4 kB]
1793s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fs all 2.4.16-4 [91.3 kB]
1793s Get:237 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lxml arm64 5.3.0-1 [1205 kB]
1793s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build4 [26.7 kB]
1793s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-unicodedata2 arm64 15.1.0+ds-1build2 [360 kB]
1793s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 unicode-data all 15.1.0-1 [8878 kB]
1794s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fonttools arm64 4.46.0-1build2 [1398 kB]
1794s Get:242 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-kiwisolver arm64 1.4.7-2build1 [62.0 kB]
1794s Get:243 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python3-matplotlib arm64 3.8.3-3ubuntu1 [4612 kB]
1794s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ase all 3.23.0-1 [1754 kB]
1794s Get:245 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-soupsieve all 2.6-1 [33.0 kB]
1794s Get:246 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-bs4 all 4.12.3-3 [109 kB]
1794s Get:247 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-bson all 4.7.3-2ubuntu2 [41.2 kB]
1794s Get:248 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-cftime arm64 1.6.4-1 [195 kB]
1794s Get:249 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-defusedxml all 0.7.1-2 [42.0 kB]
1794s Get:250 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dnspython all 2.6.1-1ubuntu1 [163 kB]
1794s Get:251 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-roman all 4.2-1 [10.0 kB]
1794s Get:252 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-docutils all 0.21.2+dfsg-2 [409 kB]
1794s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-dotenv all 1.0.1-1 [22.3 kB]
1794s Get:254 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-email-validator all 2.2.0-1 [28.5 kB]
1794s Get:255 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pandas-lib arm64 2.2.3+dfsg-5 [4422 kB]
1794s Get:256 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pandas all 2.2.3+dfsg-5 [3112 kB]
1794s Get:257 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pydantic-core arm64 2.23.4-2build1 [1753 kB]
1794s Get:258 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pydantic arm64 2.9.1-1 [290 kB]
1794s Get:259 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-tqdm all 4.67.0-1 [91.6 kB]
1794s Get:260 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-monty all 2024.7.29-1 [38.0 kB]
1794s Get:261 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-latexcodec all 3.0.0-1 [16.6 kB]
1794s Get:262 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pybtex all 0.24.0-4 [70.0 kB]
1794s Get:263 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pydantic-settings all 2.6.1-1 [40.8 kB]
1794s Get:264 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-joblib all 1.3.2-5 [206 kB]
1794s Get:265 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-networkx all 3.2.1-4ubuntu1 [11.5 MB]
1794s Get:266 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-palettable all 3.3.3-1 [81.3 kB]
1794s Get:267 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fastjsonschema all 2.20.0-1 [20.1 kB]
1794s Get:268 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-platformdirs all 4.3.6-1 [16.8 kB]
1794s Get:269 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB]
1794s Get:270 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-jupyter-core all 5.7.2-4 [28.0 kB]
1794s Get:271 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-nbformat all 5.9.1-1 [41.2 kB]
1794s Get:272 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tenacity all 8.5.0-0ubuntu1 [17.0 kB]
1794s Get:273 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-plotly all 5.20.0+dfsg-1 [2766 kB]
1795s Get:274 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ruamel.yaml.clib arm64 0.2.8+ds-2 [129 kB]
1795s Get:275 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ruamel.yaml all 0.18.6+ds-3 [126 kB]
1795s Get:276 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tabulate all 0.9.0-1 [45.3 kB]
1795s Get:277 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-uncertainties all 3.2.2-1 [51.4 kB]
1795s Get:278 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pymatgen arm64 2024.6.10+dfsg1-8 [2499 kB]
1795s Get:279 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-openbabel arm64 3.1.1+dfsg-11ubuntu1 [607 kB]
1795s Get:280 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-emmet-core all 0.76.2-1 [123 kB]
1795s Get:281 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-frozendict all 1.2-3 [4906 B]
1795s Get:282 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py-serial arm64 3.11.0-5ubuntu1 [1064 kB]
1795s Get:283 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py all 3.11.0-5ubuntu1 [7974 B]
1795s Get:284 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-imagesize all 1.4.1-1 [6844 B]
1795s Get:285 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B]
1795s Get:286 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-netcdf4 arm64 1.7.2-1 [567 kB]
1795s Get:287 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-phonopy arm64 2.23.1-1 [262 kB]
1795s Get:288 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB]
1795s Get:289 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB]
1795s Get:290 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-snowballstemmer all 2.2.0-4build1 [59.8 kB]
1795s Get:291 http://ftpmaster.internal/ubuntu plucky/main arm64 sphinx-common all 7.4.7-4 [775 kB]
1795s Get:292 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-alabaster all 0.7.16-0.1 [18.5 kB]
1795s Get:293 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-sphinx all 7.4.7-4 [593 kB]
1795s Get:294 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sphinxcontrib.jquery all 4.1-5 [6678 B]
1795s Get:295 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sphinx-rtd-theme all 3.0.1+dfsg-1 [23.5 kB]
1795s Get:296 http://ftpmaster.internal/ubuntu plucky/universe arm64 mpi-default-bin arm64 1.17 [2296 B]
1795s Get:297 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-mpi4py arm64 3.1.6-9ubuntu1 [449 kB]
1795s Get:298 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-vtk9 arm64 9.3.0+dfsg1-1build1 [7922 kB]
1796s Fetched 516 MB in 17s (30.3 MB/s)
1796s Selecting previously unselected package fonts-lato.
1796s (Reading database ... 
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(Reading database ... 79957 files and directories currently installed.)
1796s Preparing to unpack .../000-fonts-lato_2.015-1_all.deb ...
1796s Unpacking fonts-lato (2.015-1) ...
1796s Selecting previously unselected package sgml-base.
1796s Preparing to unpack .../001-sgml-base_1.31_all.deb ...
1796s Unpacking sgml-base (1.31) ...
1796s Selecting previously unselected package m4.
1796s Preparing to unpack .../002-m4_1.4.19-4build1_arm64.deb ...
1796s Unpacking m4 (1.4.19-4build1) ...
1796s Selecting previously unselected package autoconf.
1796s Preparing to unpack .../003-autoconf_2.72-3_all.deb ...
1796s Unpacking autoconf (2.72-3) ...
1797s Selecting previously unselected package autotools-dev.
1797s Preparing to unpack .../004-autotools-dev_20220109.1_all.deb ...
1797s Unpacking autotools-dev (20220109.1) ...
1797s Selecting previously unselected package automake.
1797s Preparing to unpack .../005-automake_1%3a1.16.5-1.3ubuntu1_all.deb ...
1797s Unpacking automake (1:1.16.5-1.3ubuntu1) ...
1797s Selecting previously unselected package autopoint.
1797s Preparing to unpack .../006-autopoint_0.22.5-2_all.deb ...
1797s Unpacking autopoint (0.22.5-2) ...
1797s Selecting previously unselected package libtcl8.6:arm64.
1797s Preparing to unpack .../007-libtcl8.6_8.6.15+dfsg-2_arm64.deb ...
1797s Unpacking libtcl8.6:arm64 (8.6.15+dfsg-2) ...
1797s Selecting previously unselected package fonts-dejavu-mono.
1797s Preparing to unpack .../008-fonts-dejavu-mono_2.37-8_all.deb ...
1797s Unpacking fonts-dejavu-mono (2.37-8) ...
1797s Selecting previously unselected package fonts-dejavu-core.
1797s Preparing to unpack .../009-fonts-dejavu-core_2.37-8_all.deb ...
1797s Unpacking fonts-dejavu-core (2.37-8) ...
1797s Selecting previously unselected package fontconfig-config.
1797s Preparing to unpack .../010-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ...
1797s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
1797s Selecting previously unselected package libfontconfig1:arm64.
1797s Preparing to unpack .../011-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ...
1797s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ...
1797s Selecting previously unselected package libxrender1:arm64.
1797s Preparing to unpack .../012-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ...
1797s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ...
1797s Selecting previously unselected package libxft2:arm64.
1797s Preparing to unpack .../013-libxft2_2.3.6-1build1_arm64.deb ...
1797s Unpacking libxft2:arm64 (2.3.6-1build1) ...
1797s Selecting previously unselected package x11-common.
1797s Preparing to unpack .../014-x11-common_1%3a7.7+23ubuntu3_all.deb ...
1797s Unpacking x11-common (1:7.7+23ubuntu3) ...
1797s Selecting previously unselected package libxss1:arm64.
1797s Preparing to unpack .../015-libxss1_1%3a1.2.3-1build3_arm64.deb ...
1797s Unpacking libxss1:arm64 (1:1.2.3-1build3) ...
1797s Selecting previously unselected package libtk8.6:arm64.
1797s Preparing to unpack .../016-libtk8.6_8.6.15-1_arm64.deb ...
1797s Unpacking libtk8.6:arm64 (8.6.15-1) ...
1797s Selecting previously unselected package tk8.6-blt2.5.
1797s Preparing to unpack .../017-tk8.6-blt2.5_2.5.3+dfsg-7build1_arm64.deb ...
1797s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ...
1797s Selecting previously unselected package blt.
1797s Preparing to unpack .../018-blt_2.5.3+dfsg-7build1_arm64.deb ...
1797s Unpacking blt (2.5.3+dfsg-7build1) ...
1797s Selecting previously unselected package libisl23:arm64.
1797s Preparing to unpack .../019-libisl23_0.27-1_arm64.deb ...
1797s Unpacking libisl23:arm64 (0.27-1) ...
1797s Selecting previously unselected package libmpc3:arm64.
1798s Preparing to unpack .../020-libmpc3_1.3.1-1build2_arm64.deb ...
1798s Unpacking libmpc3:arm64 (1.3.1-1build2) ...
1798s Selecting previously unselected package cpp-14-aarch64-linux-gnu.
1798s Preparing to unpack .../021-cpp-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package cpp-14.
1798s Preparing to unpack .../022-cpp-14_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking cpp-14 (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package cpp-aarch64-linux-gnu.
1798s Preparing to unpack .../023-cpp-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ...
1798s Unpacking cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
1798s Selecting previously unselected package cpp.
1798s Preparing to unpack .../024-cpp_4%3a14.1.0-2ubuntu1_arm64.deb ...
1798s Unpacking cpp (4:14.1.0-2ubuntu1) ...
1798s Selecting previously unselected package libcc1-0:arm64.
1798s Preparing to unpack .../025-libcc1-0_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking libcc1-0:arm64 (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package libgomp1:arm64.
1798s Preparing to unpack .../026-libgomp1_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package libitm1:arm64.
1798s Preparing to unpack .../027-libitm1_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking libitm1:arm64 (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package libasan8:arm64.
1798s Preparing to unpack .../028-libasan8_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking libasan8:arm64 (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package liblsan0:arm64.
1798s Preparing to unpack .../029-liblsan0_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking liblsan0:arm64 (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package libtsan2:arm64.
1798s Preparing to unpack .../030-libtsan2_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking libtsan2:arm64 (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package libubsan1:arm64.
1798s Preparing to unpack .../031-libubsan1_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking libubsan1:arm64 (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package libhwasan0:arm64.
1798s Preparing to unpack .../032-libhwasan0_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking libhwasan0:arm64 (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package libgcc-14-dev:arm64.
1798s Preparing to unpack .../033-libgcc-14-dev_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking libgcc-14-dev:arm64 (14.2.0-8ubuntu1) ...
1798s Selecting previously unselected package gcc-14-aarch64-linux-gnu.
1798s Preparing to unpack .../034-gcc-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ...
1798s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
1799s Selecting previously unselected package gcc-14.
1799s Preparing to unpack .../035-gcc-14_14.2.0-8ubuntu1_arm64.deb ...
1799s Unpacking gcc-14 (14.2.0-8ubuntu1) ...
1799s Selecting previously unselected package gcc-aarch64-linux-gnu.
1799s Preparing to unpack .../036-gcc-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ...
1799s Unpacking gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
1799s Selecting previously unselected package gcc.
1799s Preparing to unpack .../037-gcc_4%3a14.1.0-2ubuntu1_arm64.deb ...
1799s Unpacking gcc (4:14.1.0-2ubuntu1) ...
1799s Selecting previously unselected package libstdc++-14-dev:arm64.
1799s Preparing to unpack .../038-libstdc++-14-dev_14.2.0-8ubuntu1_arm64.deb ...
1799s Unpacking libstdc++-14-dev:arm64 (14.2.0-8ubuntu1) ...
1799s Selecting previously unselected package g++-14-aarch64-linux-gnu.
1799s Preparing to unpack .../039-g++-14-aarch64-linux-gnu_14.2.0-8ubuntu1_arm64.deb ...
1799s Unpacking g++-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
1799s Selecting previously unselected package g++-14.
1799s Preparing to unpack .../040-g++-14_14.2.0-8ubuntu1_arm64.deb ...
1799s Unpacking g++-14 (14.2.0-8ubuntu1) ...
1799s Selecting previously unselected package g++-aarch64-linux-gnu.
1799s Preparing to unpack .../041-g++-aarch64-linux-gnu_4%3a14.1.0-2ubuntu1_arm64.deb ...
1799s Unpacking g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
1799s Selecting previously unselected package g++.
1800s Preparing to unpack .../042-g++_4%3a14.1.0-2ubuntu1_arm64.deb ...
1800s Unpacking g++ (4:14.1.0-2ubuntu1) ...
1800s Selecting previously unselected package build-essential.
1800s Preparing to unpack .../043-build-essential_12.10ubuntu1_arm64.deb ...
1800s Unpacking build-essential (12.10ubuntu1) ...
1800s Selecting previously unselected package cython3.
1800s Preparing to unpack .../044-cython3_3.0.11+dfsg-1ubuntu2_arm64.deb ...
1800s Unpacking cython3 (3.0.11+dfsg-1ubuntu2) ...
1800s Selecting previously unselected package libdebhelper-perl.
1800s Preparing to unpack .../045-libdebhelper-perl_13.20ubuntu1_all.deb ...
1800s Unpacking libdebhelper-perl (13.20ubuntu1) ...
1800s Selecting previously unselected package libtool.
1800s Preparing to unpack .../046-libtool_2.4.7-7build1_all.deb ...
1800s Unpacking libtool (2.4.7-7build1) ...
1800s Selecting previously unselected package dh-autoreconf.
1800s Preparing to unpack .../047-dh-autoreconf_20_all.deb ...
1800s Unpacking dh-autoreconf (20) ...
1800s Selecting previously unselected package libarchive-zip-perl.
1800s Preparing to unpack .../048-libarchive-zip-perl_1.68-1_all.deb ...
1800s Unpacking libarchive-zip-perl (1.68-1) ...
1800s Selecting previously unselected package libfile-stripnondeterminism-perl.
1800s Preparing to unpack .../049-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ...
1800s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ...
1800s Selecting previously unselected package dh-strip-nondeterminism.
1800s Preparing to unpack .../050-dh-strip-nondeterminism_1.14.0-1_all.deb ...
1800s Unpacking dh-strip-nondeterminism (1.14.0-1) ...
1800s Selecting previously unselected package debugedit.
1800s Preparing to unpack .../051-debugedit_1%3a5.1-1_arm64.deb ...
1800s Unpacking debugedit (1:5.1-1) ...
1800s Selecting previously unselected package dwz.
1800s Preparing to unpack .../052-dwz_0.15-1build6_arm64.deb ...
1800s Unpacking dwz (0.15-1build6) ...
1800s Selecting previously unselected package gettext.
1800s Preparing to unpack .../053-gettext_0.22.5-2_arm64.deb ...
1800s Unpacking gettext (0.22.5-2) ...
1800s Selecting previously unselected package intltool-debian.
1800s Preparing to unpack .../054-intltool-debian_0.35.0+20060710.6_all.deb ...
1800s Unpacking intltool-debian (0.35.0+20060710.6) ...
1800s Selecting previously unselected package po-debconf.
1800s Preparing to unpack .../055-po-debconf_1.0.21+nmu1_all.deb ...
1800s Unpacking po-debconf (1.0.21+nmu1) ...
1800s Selecting previously unselected package debhelper.
1800s Preparing to unpack .../056-debhelper_13.20ubuntu1_all.deb ...
1800s Unpacking debhelper (13.20ubuntu1) ...
1800s Selecting previously unselected package dh-python.
1800s Preparing to unpack .../057-dh-python_6.20241024_all.deb ...
1800s Unpacking dh-python (6.20241024) ...
1800s Selecting previously unselected package xml-core.
1800s Preparing to unpack .../058-xml-core_0.19_all.deb ...
1800s Unpacking xml-core (0.19) ...
1800s Selecting previously unselected package docutils-common.
1800s Preparing to unpack .../059-docutils-common_0.21.2+dfsg-2_all.deb ...
1800s Unpacking docutils-common (0.21.2+dfsg-2) ...
1800s Selecting previously unselected package fontconfig.
1800s Preparing to unpack .../060-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ...
1800s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
1800s Selecting previously unselected package fonts-font-awesome.
1800s Preparing to unpack .../061-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
1800s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
1800s Selecting previously unselected package fonts-glyphicons-halflings.
1800s Preparing to unpack .../062-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
1800s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
1800s Selecting previously unselected package fonts-lyx.
1800s Preparing to unpack .../063-fonts-lyx_2.4.2.1-1_all.deb ...
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1801s Selecting previously unselected package fonts-mathjax.
1801s Preparing to unpack .../064-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
1801s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
1801s Selecting previously unselected package libaec0:arm64.
1801s Preparing to unpack .../065-libaec0_1.1.3-1_arm64.deb ...
1801s Unpacking libaec0:arm64 (1.1.3-1) ...
1801s Selecting previously unselected package libllvm17t64:arm64.
1801s Preparing to unpack .../066-libllvm17t64_1%3a17.0.6-18_arm64.deb ...
1801s Unpacking libllvm17t64:arm64 (1:17.0.6-18) ...
1801s Selecting previously unselected package libamd-comgr2:arm64.
1801s Preparing to unpack .../067-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_arm64.deb ...
1801s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ...
1802s Selecting previously unselected package libdrm-amdgpu1:arm64.
1802s Preparing to unpack .../068-libdrm-amdgpu1_2.4.123-1_arm64.deb ...
1802s Unpacking libdrm-amdgpu1:arm64 (2.4.123-1) ...
1802s Selecting previously unselected package libhsakmt1:arm64.
1802s Preparing to unpack .../069-libhsakmt1_5.7.0-1build1_arm64.deb ...
1802s Unpacking libhsakmt1:arm64 (5.7.0-1build1) ...
1802s Selecting previously unselected package libhsa-runtime64-1.
1802s Preparing to unpack .../070-libhsa-runtime64-1_5.7.1-2build1_arm64.deb ...
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1802s Selecting previously unselected package libamdhip64-5.
1802s Preparing to unpack .../071-libamdhip64-5_5.7.1-5_arm64.deb ...
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1802s Selecting previously unselected package libblas3:arm64.
1802s Preparing to unpack .../072-libblas3_3.12.0-3build2_arm64.deb ...
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1802s Selecting previously unselected package libboost-iostreams1.83.0:arm64.
1802s Preparing to unpack .../073-libboost-iostreams1.83.0_1.83.0-3.2ubuntu2_arm64.deb ...
1802s Unpacking libboost-iostreams1.83.0:arm64 (1.83.0-3.2ubuntu2) ...
1802s Selecting previously unselected package libpixman-1-0:arm64.
1802s Preparing to unpack .../074-libpixman-1-0_0.44.0-3_arm64.deb ...
1802s Unpacking libpixman-1-0:arm64 (0.44.0-3) ...
1802s Selecting previously unselected package libxcb-render0:arm64.
1802s Preparing to unpack .../075-libxcb-render0_1.17.0-2_arm64.deb ...
1802s Unpacking libxcb-render0:arm64 (1.17.0-2) ...
1802s Selecting previously unselected package libxcb-shm0:arm64.
1802s Preparing to unpack .../076-libxcb-shm0_1.17.0-2_arm64.deb ...
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1802s Selecting previously unselected package libcairo2:arm64.
1802s Preparing to unpack .../077-libcairo2_1.18.2-2_arm64.deb ...
1802s Unpacking libcairo2:arm64 (1.18.2-2) ...
1802s Selecting previously unselected package libdeflate0:arm64.
1802s Preparing to unpack .../078-libdeflate0_1.22-1_arm64.deb ...
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1802s Selecting previously unselected package libdouble-conversion3:arm64.
1802s Preparing to unpack .../079-libdouble-conversion3_3.3.0-1build1_arm64.deb ...
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1802s Selecting previously unselected package libdrm-radeon1:arm64.
1802s Preparing to unpack .../080-libdrm-radeon1_2.4.123-1_arm64.deb ...
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1802s Selecting previously unselected package libwayland-server0:arm64.
1802s Preparing to unpack .../081-libwayland-server0_1.23.0-1_arm64.deb ...
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1802s Selecting previously unselected package libxcb-randr0:arm64.
1802s Preparing to unpack .../082-libxcb-randr0_1.17.0-2_arm64.deb ...
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1802s Selecting previously unselected package libglapi-mesa:arm64.
1802s Preparing to unpack .../083-libglapi-mesa_24.2.3-1ubuntu1_arm64.deb ...
1802s Unpacking libglapi-mesa:arm64 (24.2.3-1ubuntu1) ...
1802s Selecting previously unselected package libx11-xcb1:arm64.
1802s Preparing to unpack .../084-libx11-xcb1_2%3a1.8.10-2_arm64.deb ...
1802s Unpacking libx11-xcb1:arm64 (2:1.8.10-2) ...
1802s Selecting previously unselected package libxcb-dri2-0:arm64.
1802s Preparing to unpack .../085-libxcb-dri2-0_1.17.0-2_arm64.deb ...
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1802s Selecting previously unselected package libxcb-dri3-0:arm64.
1802s Preparing to unpack .../086-libxcb-dri3-0_1.17.0-2_arm64.deb ...
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1802s Selecting previously unselected package libxcb-present0:arm64.
1803s Preparing to unpack .../087-libxcb-present0_1.17.0-2_arm64.deb ...
1803s Unpacking libxcb-present0:arm64 (1.17.0-2) ...
1803s Selecting previously unselected package libxcb-sync1:arm64.
1803s Preparing to unpack .../088-libxcb-sync1_1.17.0-2_arm64.deb ...
1803s Unpacking libxcb-sync1:arm64 (1.17.0-2) ...
1803s Selecting previously unselected package libxcb-xfixes0:arm64.
1803s Preparing to unpack .../089-libxcb-xfixes0_1.17.0-2_arm64.deb ...
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1803s Selecting previously unselected package libxshmfence1:arm64.
1803s Preparing to unpack .../090-libxshmfence1_1.3-1build5_arm64.deb ...
1803s Unpacking libxshmfence1:arm64 (1.3-1build5) ...
1803s Selecting previously unselected package mesa-libgallium:arm64.
1803s Preparing to unpack .../091-mesa-libgallium_24.2.3-1ubuntu1_arm64.deb ...
1803s Unpacking mesa-libgallium:arm64 (24.2.3-1ubuntu1) ...
1803s Selecting previously unselected package libgbm1:arm64.
1803s Preparing to unpack .../092-libgbm1_24.2.3-1ubuntu1_arm64.deb ...
1803s Unpacking libgbm1:arm64 (24.2.3-1ubuntu1) ...
1803s Selecting previously unselected package libwayland-client0:arm64.
1803s Preparing to unpack .../093-libwayland-client0_1.23.0-1_arm64.deb ...
1803s Unpacking libwayland-client0:arm64 (1.23.0-1) ...
1803s Selecting previously unselected package libegl-mesa0:arm64.
1803s Preparing to unpack .../094-libegl-mesa0_24.2.3-1ubuntu1_arm64.deb ...
1803s Unpacking libegl-mesa0:arm64 (24.2.3-1ubuntu1) ...
1803s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64.
1803s Preparing to unpack .../095-libevent-pthreads-2.1-7t64_2.1.12-stable-10_arm64.deb ...
1803s Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ...
1803s Selecting previously unselected package libexpat1-dev:arm64.
1803s Preparing to unpack .../096-libexpat1-dev_2.6.4-1_arm64.deb ...
1803s Unpacking libexpat1-dev:arm64 (2.6.4-1) ...
1803s Selecting previously unselected package librdmacm1t64:arm64.
1803s Preparing to unpack .../097-librdmacm1t64_52.0-2ubuntu1_arm64.deb ...
1803s Unpacking librdmacm1t64:arm64 (52.0-2ubuntu1) ...
1803s Selecting previously unselected package libfabric1:arm64.
1803s Preparing to unpack .../098-libfabric1_1.17.0-3ubuntu1_arm64.deb ...
1803s Unpacking libfabric1:arm64 (1.17.0-3ubuntu1) ...
1803s Selecting previously unselected package libgfortran5:arm64.
1803s Preparing to unpack .../099-libgfortran5_14.2.0-8ubuntu1_arm64.deb ...
1803s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ...
1803s Selecting previously unselected package libvulkan1:arm64.
1803s Preparing to unpack .../100-libvulkan1_1.3.296.0-1_arm64.deb ...
1803s Unpacking libvulkan1:arm64 (1.3.296.0-1) ...
1803s Selecting previously unselected package libgl1-mesa-dri:arm64.
1803s Preparing to unpack .../101-libgl1-mesa-dri_24.2.3-1ubuntu1_arm64.deb ...
1803s Unpacking libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ...
1803s Selecting previously unselected package libglvnd0:arm64.
1803s Preparing to unpack .../102-libglvnd0_1.7.0-1build1_arm64.deb ...
1803s Unpacking libglvnd0:arm64 (1.7.0-1build1) ...
1803s Selecting previously unselected package libxcb-glx0:arm64.
1803s Preparing to unpack .../103-libxcb-glx0_1.17.0-2_arm64.deb ...
1803s Unpacking libxcb-glx0:arm64 (1.17.0-2) ...
1803s Selecting previously unselected package libxfixes3:arm64.
1803s Preparing to unpack .../104-libxfixes3_1%3a6.0.0-2build1_arm64.deb ...
1803s Unpacking libxfixes3:arm64 (1:6.0.0-2build1) ...
1803s Selecting previously unselected package libxxf86vm1:arm64.
1803s Preparing to unpack .../105-libxxf86vm1_1%3a1.1.4-1build4_arm64.deb ...
1803s Unpacking libxxf86vm1:arm64 (1:1.1.4-1build4) ...
1803s Selecting previously unselected package libglx-mesa0:arm64.
1803s Preparing to unpack .../106-libglx-mesa0_24.2.3-1ubuntu1_arm64.deb ...
1803s Unpacking libglx-mesa0:arm64 (24.2.3-1ubuntu1) ...
1803s Selecting previously unselected package libglx0:arm64.
1803s Preparing to unpack .../107-libglx0_1.7.0-1build1_arm64.deb ...
1803s Unpacking libglx0:arm64 (1.7.0-1build1) ...
1803s Selecting previously unselected package libgl1:arm64.
1803s Preparing to unpack .../108-libgl1_1.7.0-1build1_arm64.deb ...
1803s Unpacking libgl1:arm64 (1.7.0-1build1) ...
1804s Selecting previously unselected package libgl2ps1.4.
1804s Preparing to unpack .../109-libgl2ps1.4_1.4.2+dfsg1-2build1_arm64.deb ...
1804s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2build1) ...
1804s Selecting previously unselected package libglew2.2:arm64.
1804s Preparing to unpack .../110-libglew2.2_2.2.0-4build1_arm64.deb ...
1804s Unpacking libglew2.2:arm64 (2.2.0-4build1) ...
1804s Selecting previously unselected package libgraphite2-3:arm64.
1804s Preparing to unpack .../111-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ...
1804s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
1804s Selecting previously unselected package libharfbuzz0b:arm64.
1804s Preparing to unpack .../112-libharfbuzz0b_10.0.1-1_arm64.deb ...
1804s Unpacking libharfbuzz0b:arm64 (10.0.1-1) ...
1804s Selecting previously unselected package libsz2:arm64.
1804s Preparing to unpack .../113-libsz2_1.1.3-1_arm64.deb ...
1804s Unpacking libsz2:arm64 (1.1.3-1) ...
1804s Selecting previously unselected package libhdf5-103-1t64:arm64.
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1808s Selecting previously unselected package libtheora0:arm64.
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1808s Selecting previously unselected package libopengl0:arm64.
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1808s Selecting previously unselected package libvtk9.3:arm64.
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1809s Selecting previously unselected package libxslt1.1:arm64.
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1809s Selecting previously unselected package openmpi-common.
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1810s Selecting previously unselected package python3-packaging.
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1810s Selecting previously unselected package pybuild-plugin-pyproject.
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1810s Selecting previously unselected package pymatgen-test-files.
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1813s Selecting previously unselected package python3-dev.
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1813s Unpacking python3-dev (3.12.6-0ubuntu1) ...
1813s Selecting previously unselected package python3-all-dev.
1813s Preparing to unpack .../213-python3-all-dev_3.12.6-0ubuntu1_arm64.deb ...
1813s Unpacking python3-all-dev (3.12.6-0ubuntu1) ...
1813s Selecting previously unselected package python3-annotated-types.
1813s Preparing to unpack .../214-python3-annotated-types_0.7.0-1_all.deb ...
1813s Unpacking python3-annotated-types (0.7.0-1) ...
1813s Selecting previously unselected package python3-appdirs.
1814s Preparing to unpack .../215-python3-appdirs_1.4.4-4_all.deb ...
1814s Unpacking python3-appdirs (1.4.4-4) ...
1814s Selecting previously unselected package python3-numpy.
1814s Preparing to unpack .../216-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ...
1814s Unpacking python3-numpy (1:1.26.4+ds-11build1) ...
1814s Selecting previously unselected package python3-decorator.
1814s Preparing to unpack .../217-python3-decorator_5.1.1-5_all.deb ...
1814s Unpacking python3-decorator (5.1.1-5) ...
1814s Selecting previously unselected package python3-scipy.
1814s Preparing to unpack .../218-python3-scipy_1.13.1-5_arm64.deb ...
1814s Unpacking python3-scipy (1.13.1-5) ...
1814s Selecting previously unselected package python3-spglib.
1814s Preparing to unpack .../219-python3-spglib_2.4.0-1ubuntu1_arm64.deb ...
1814s Unpacking python3-spglib (2.4.0-1ubuntu1) ...
1814s Selecting previously unselected package python3-six.
1814s Preparing to unpack .../220-python3-six_1.16.0-7_all.deb ...
1814s Unpacking python3-six (1.16.0-7) ...
1814s Selecting previously unselected package python3-dateutil.
1814s Preparing to unpack .../221-python3-dateutil_2.9.0-2_all.deb ...
1814s Unpacking python3-dateutil (2.9.0-2) ...
1814s Selecting previously unselected package libopenjp2-7:arm64.
1814s Preparing to unpack .../222-libopenjp2-7_2.5.0-2ubuntu1_arm64.deb ...
1814s Unpacking libopenjp2-7:arm64 (2.5.0-2ubuntu1) ...
1814s Selecting previously unselected package python3-pil:arm64.
1814s Preparing to unpack .../223-python3-pil_10.4.0-1ubuntu1_arm64.deb ...
1814s Unpacking python3-pil:arm64 (10.4.0-1ubuntu1) ...
1814s Selecting previously unselected package python3.12-tk.
1814s Preparing to unpack .../224-python3.12-tk_3.12.7-3_arm64.deb ...
1814s Unpacking python3.12-tk (3.12.7-3) ...
1815s Selecting previously unselected package python3-tk:arm64.
1815s Preparing to unpack .../225-python3-tk_3.12.6-1ubuntu1_arm64.deb ...
1815s Unpacking python3-tk:arm64 (3.12.6-1ubuntu1) ...
1815s Selecting previously unselected package python3-pil.imagetk:arm64.
1815s Preparing to unpack .../226-python3-pil.imagetk_10.4.0-1ubuntu1_arm64.deb ...
1815s Unpacking python3-pil.imagetk:arm64 (10.4.0-1ubuntu1) ...
1815s Selecting previously unselected package python3-contourpy.
1815s Preparing to unpack .../227-python3-contourpy_1.3.0-2_arm64.deb ...
1815s Unpacking python3-contourpy (1.3.0-2) ...
1815s Selecting previously unselected package python3-cycler.
1815s Preparing to unpack .../228-python3-cycler_0.12.1-1_all.deb ...
1815s Unpacking python3-cycler (0.12.1-1) ...
1815s Selecting previously unselected package python3-brotli.
1815s Preparing to unpack .../229-python3-brotli_1.1.0-2build2_arm64.deb ...
1815s Unpacking python3-brotli (1.1.0-2build2) ...
1815s Selecting previously unselected package python3-ufolib2.
1815s Preparing to unpack .../230-python3-ufolib2_0.16.1+dfsg1-1_all.deb ...
1815s Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ...
1815s Selecting previously unselected package python3-mpmath.
1815s Preparing to unpack .../231-python3-mpmath_1.3.0-1_all.deb ...
1815s Unpacking python3-mpmath (1.3.0-1) ...
1815s Selecting previously unselected package python3-sympy.
1815s Preparing to unpack .../232-python3-sympy_1.13.3-1_all.deb ...
1815s Unpacking python3-sympy (1.13.3-1) ...
1815s Selecting previously unselected package python3-tz.
1815s Preparing to unpack .../233-python3-tz_2024.1-2_all.deb ...
1815s Unpacking python3-tz (2024.1-2) ...
1815s Selecting previously unselected package python3-fs.
1815s Preparing to unpack .../234-python3-fs_2.4.16-4_all.deb ...
1815s Unpacking python3-fs (2.4.16-4) ...
1815s Selecting previously unselected package python3-lxml:arm64.
1815s Preparing to unpack .../235-python3-lxml_5.3.0-1_arm64.deb ...
1815s Unpacking python3-lxml:arm64 (5.3.0-1) ...
1815s Selecting previously unselected package python3-lz4.
1815s Preparing to unpack .../236-python3-lz4_4.0.2+dfsg-1build4_arm64.deb ...
1815s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ...
1815s Selecting previously unselected package python3-unicodedata2.
1815s Preparing to unpack .../237-python3-unicodedata2_15.1.0+ds-1build2_arm64.deb ...
1815s Unpacking python3-unicodedata2 (15.1.0+ds-1build2) ...
1815s Selecting previously unselected package unicode-data.
1815s Preparing to unpack .../238-unicode-data_15.1.0-1_all.deb ...
1815s Unpacking unicode-data (15.1.0-1) ...
1816s Selecting previously unselected package python3-fonttools.
1816s Preparing to unpack .../239-python3-fonttools_4.46.0-1build2_arm64.deb ...
1816s Unpacking python3-fonttools (4.46.0-1build2) ...
1816s Selecting previously unselected package python3-kiwisolver.
1816s Preparing to unpack .../240-python3-kiwisolver_1.4.7-2build1_arm64.deb ...
1816s Unpacking python3-kiwisolver (1.4.7-2build1) ...
1816s Selecting previously unselected package python3-matplotlib.
1816s Preparing to unpack .../241-python3-matplotlib_3.8.3-3ubuntu1_arm64.deb ...
1816s Unpacking python3-matplotlib (3.8.3-3ubuntu1) ...
1816s Selecting previously unselected package python3-ase.
1816s Preparing to unpack .../242-python3-ase_3.23.0-1_all.deb ...
1816s Unpacking python3-ase (3.23.0-1) ...
1816s Selecting previously unselected package python3-soupsieve.
1816s Preparing to unpack .../243-python3-soupsieve_2.6-1_all.deb ...
1816s Unpacking python3-soupsieve (2.6-1) ...
1816s Selecting previously unselected package python3-bs4.
1816s Preparing to unpack .../244-python3-bs4_4.12.3-3_all.deb ...
1816s Unpacking python3-bs4 (4.12.3-3) ...
1816s Selecting previously unselected package python3-bson.
1816s Preparing to unpack .../245-python3-bson_4.7.3-2ubuntu2_all.deb ...
1816s Unpacking python3-bson (4.7.3-2ubuntu2) ...
1816s Selecting previously unselected package python3-cftime.
1816s Preparing to unpack .../246-python3-cftime_1.6.4-1_arm64.deb ...
1816s Unpacking python3-cftime (1.6.4-1) ...
1816s Selecting previously unselected package python3-defusedxml.
1816s Preparing to unpack .../247-python3-defusedxml_0.7.1-2_all.deb ...
1816s Unpacking python3-defusedxml (0.7.1-2) ...
1816s Selecting previously unselected package python3-dnspython.
1816s Preparing to unpack .../248-python3-dnspython_2.6.1-1ubuntu1_all.deb ...
1816s Unpacking python3-dnspython (2.6.1-1ubuntu1) ...
1816s Selecting previously unselected package python3-roman.
1817s Preparing to unpack .../249-python3-roman_4.2-1_all.deb ...
1817s Unpacking python3-roman (4.2-1) ...
1817s Selecting previously unselected package python3-docutils.
1817s Preparing to unpack .../250-python3-docutils_0.21.2+dfsg-2_all.deb ...
1817s Unpacking python3-docutils (0.21.2+dfsg-2) ...
1817s Selecting previously unselected package python3-dotenv.
1817s Preparing to unpack .../251-python3-dotenv_1.0.1-1_all.deb ...
1817s Unpacking python3-dotenv (1.0.1-1) ...
1817s Selecting previously unselected package python3-email-validator.
1817s Preparing to unpack .../252-python3-email-validator_2.2.0-1_all.deb ...
1817s Unpacking python3-email-validator (2.2.0-1) ...
1817s Selecting previously unselected package python3-pandas-lib:arm64.
1817s Preparing to unpack .../253-python3-pandas-lib_2.2.3+dfsg-5_arm64.deb ...
1817s Unpacking python3-pandas-lib:arm64 (2.2.3+dfsg-5) ...
1817s Selecting previously unselected package python3-pandas.
1817s Preparing to unpack .../254-python3-pandas_2.2.3+dfsg-5_all.deb ...
1817s Unpacking python3-pandas (2.2.3+dfsg-5) ...
1817s Selecting previously unselected package python3-pydantic-core.
1817s Preparing to unpack .../255-python3-pydantic-core_2.23.4-2build1_arm64.deb ...
1817s Unpacking python3-pydantic-core (2.23.4-2build1) ...
1817s Selecting previously unselected package python3-pydantic.
1817s Preparing to unpack .../256-python3-pydantic_2.9.1-1_arm64.deb ...
1817s Unpacking python3-pydantic (2.9.1-1) ...
1817s Selecting previously unselected package python3-tqdm.
1817s Preparing to unpack .../257-python3-tqdm_4.67.0-1_all.deb ...
1817s Unpacking python3-tqdm (4.67.0-1) ...
1817s Selecting previously unselected package python3-monty.
1817s Preparing to unpack .../258-python3-monty_2024.7.29-1_all.deb ...
1817s Unpacking python3-monty (2024.7.29-1) ...
1817s Selecting previously unselected package python3-latexcodec.
1818s Preparing to unpack .../259-python3-latexcodec_3.0.0-1_all.deb ...
1818s Unpacking python3-latexcodec (3.0.0-1) ...
1818s Selecting previously unselected package python3-pybtex.
1818s Preparing to unpack .../260-python3-pybtex_0.24.0-4_all.deb ...
1818s Unpacking python3-pybtex (0.24.0-4) ...
1818s Selecting previously unselected package python3-pydantic-settings.
1818s Preparing to unpack .../261-python3-pydantic-settings_2.6.1-1_all.deb ...
1818s Unpacking python3-pydantic-settings (2.6.1-1) ...
1818s Selecting previously unselected package python3-joblib.
1818s Preparing to unpack .../262-python3-joblib_1.3.2-5_all.deb ...
1818s Unpacking python3-joblib (1.3.2-5) ...
1818s Selecting previously unselected package python3-networkx.
1818s Preparing to unpack .../263-python3-networkx_3.2.1-4ubuntu1_all.deb ...
1818s Unpacking python3-networkx (3.2.1-4ubuntu1) ...
1818s Selecting previously unselected package python3-palettable.
1818s Preparing to unpack .../264-python3-palettable_3.3.3-1_all.deb ...
1818s Unpacking python3-palettable (3.3.3-1) ...
1818s Selecting previously unselected package python3-fastjsonschema.
1818s Preparing to unpack .../265-python3-fastjsonschema_2.20.0-1_all.deb ...
1818s Unpacking python3-fastjsonschema (2.20.0-1) ...
1818s Selecting previously unselected package python3-platformdirs.
1818s Preparing to unpack .../266-python3-platformdirs_4.3.6-1_all.deb ...
1818s Unpacking python3-platformdirs (4.3.6-1) ...
1818s Selecting previously unselected package python3-traitlets.
1818s Preparing to unpack .../267-python3-traitlets_5.14.3+really5.14.3-1_all.deb ...
1818s Unpacking python3-traitlets (5.14.3+really5.14.3-1) ...
1818s Selecting previously unselected package python3-jupyter-core.
1818s Preparing to unpack .../268-python3-jupyter-core_5.7.2-4_all.deb ...
1818s Unpacking python3-jupyter-core (5.7.2-4) ...
1818s Selecting previously unselected package python3-nbformat.
1819s Preparing to unpack .../269-python3-nbformat_5.9.1-1_all.deb ...
1819s Unpacking python3-nbformat (5.9.1-1) ...
1819s Selecting previously unselected package python3-tenacity.
1819s Preparing to unpack .../270-python3-tenacity_8.5.0-0ubuntu1_all.deb ...
1819s Unpacking python3-tenacity (8.5.0-0ubuntu1) ...
1819s Selecting previously unselected package python3-plotly.
1819s Preparing to unpack .../271-python3-plotly_5.20.0+dfsg-1_all.deb ...
1819s Unpacking python3-plotly (5.20.0+dfsg-1) ...
1820s Selecting previously unselected package python3-ruamel.yaml.clib:arm64.
1820s Preparing to unpack .../272-python3-ruamel.yaml.clib_0.2.8+ds-2_arm64.deb ...
1820s Unpacking python3-ruamel.yaml.clib:arm64 (0.2.8+ds-2) ...
1820s Selecting previously unselected package python3-ruamel.yaml.
1820s Preparing to unpack .../273-python3-ruamel.yaml_0.18.6+ds-3_all.deb ...
1820s Unpacking python3-ruamel.yaml (0.18.6+ds-3) ...
1820s Selecting previously unselected package python3-tabulate.
1820s Preparing to unpack .../274-python3-tabulate_0.9.0-1_all.deb ...
1820s Unpacking python3-tabulate (0.9.0-1) ...
1820s Selecting previously unselected package python3-uncertainties.
1820s Preparing to unpack .../275-python3-uncertainties_3.2.2-1_all.deb ...
1820s Unpacking python3-uncertainties (3.2.2-1) ...
1820s Selecting previously unselected package python3-pymatgen.
1820s Preparing to unpack .../276-python3-pymatgen_2024.6.10+dfsg1-8_arm64.deb ...
1820s Unpacking python3-pymatgen (2024.6.10+dfsg1-8) ...
1820s Selecting previously unselected package python3-openbabel.
1820s Preparing to unpack .../277-python3-openbabel_3.1.1+dfsg-11ubuntu1_arm64.deb ...
1820s Unpacking python3-openbabel (3.1.1+dfsg-11ubuntu1) ...
1820s Selecting previously unselected package python3-emmet-core.
1820s Preparing to unpack .../278-python3-emmet-core_0.76.2-1_all.deb ...
1820s Unpacking python3-emmet-core (0.76.2-1) ...
1820s Selecting previously unselected package python3-frozendict.
1821s Preparing to unpack .../279-python3-frozendict_1.2-3_all.deb ...
1821s Unpacking python3-frozendict (1.2-3) ...
1821s Selecting previously unselected package python3-h5py-serial.
1821s Preparing to unpack .../280-python3-h5py-serial_3.11.0-5ubuntu1_arm64.deb ...
1821s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ...
1821s Selecting previously unselected package python3-h5py.
1821s Preparing to unpack .../281-python3-h5py_3.11.0-5ubuntu1_all.deb ...
1821s Unpacking python3-h5py (3.11.0-5ubuntu1) ...
1821s Selecting previously unselected package python3-imagesize.
1821s Preparing to unpack .../282-python3-imagesize_1.4.1-1_all.deb ...
1821s Unpacking python3-imagesize (1.4.1-1) ...
1821s Selecting previously unselected package python3-iniconfig.
1821s Preparing to unpack .../283-python3-iniconfig_1.1.1-2_all.deb ...
1821s Unpacking python3-iniconfig (1.1.1-2) ...
1821s Selecting previously unselected package python3-netcdf4.
1821s Preparing to unpack .../284-python3-netcdf4_1.7.2-1_arm64.deb ...
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1821s Selecting previously unselected package python3-phonopy.
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1821s Selecting previously unselected package python3-pluggy.
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1821s Selecting previously unselected package python3-pytest.
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1821s Unpacking python3-pytest (8.3.3-1) ...
1821s Selecting previously unselected package python3-snowballstemmer.
1821s Preparing to unpack .../288-python3-snowballstemmer_2.2.0-4build1_all.deb ...
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1821s Selecting previously unselected package sphinx-common.
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1821s Unpacking sphinx-common (7.4.7-4) ...
1821s Selecting previously unselected package python3-alabaster.
1821s Preparing to unpack .../290-python3-alabaster_0.7.16-0.1_all.deb ...
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1821s Selecting previously unselected package python3-sphinx.
1821s Preparing to unpack .../291-python3-sphinx_7.4.7-4_all.deb ...
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1821s Selecting previously unselected package python3-sphinxcontrib.jquery.
1821s Preparing to unpack .../292-python3-sphinxcontrib.jquery_4.1-5_all.deb ...
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1821s Selecting previously unselected package python3-sphinx-rtd-theme.
1821s Preparing to unpack .../293-python3-sphinx-rtd-theme_3.0.1+dfsg-1_all.deb ...
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1821s Selecting previously unselected package mpi-default-bin.
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1822s Selecting previously unselected package python3-mpi4py.
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1822s Selecting previously unselected package python3-vtk9.
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1822s Selecting previously unselected package autopkgtest-satdep.
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1822s Unpacking autopkgtest-satdep (0) ...
1822s Setting up python3-dotenv (1.0.1-1) ...
1822s Setting up dh-python (6.20241024) ...
1822s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
1822s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ...
1822s Setting up liblcms2-2:arm64 (2.16-2) ...
1822s Setting up python3-iniconfig (1.1.1-2) ...
1822s Setting up libtbbmalloc2:arm64 (2021.12.0-1ubuntu2) ...
1822s Setting up libpixman-1-0:arm64 (0.44.0-3) ...
1822s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ...
1822s Setting up libwayland-server0:arm64 (1.23.0-1) ...
1822s Setting up libx11-xcb1:arm64 (2:1.8.10-2) ...
1822s Setting up libpciaccess0:arm64 (0.17-3build1) ...
1822s Setting up libdouble-conversion3:arm64 (3.3.0-1build1) ...
1822s Setting up fonts-lato (2.015-1) ...
1822s Setting up fonts-mathjax (2.7.9+dfsg-1) ...
1822s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ...
1822s Setting up python3-pydantic-core (2.23.4-2build1) ...
1823s Setting up libogg0:arm64 (1.3.5-3build1) ...
1823s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ...
1823s Setting up proj-data (9.5.0-1) ...
1823s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
1823s Setting up libxcb-xinput0:arm64 (1.17.0-2) ...
1823s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ...
1823s Setting up python3-joblib (1.3.2-5) ...
1823s Setting up python3-lz4 (4.0.2+dfsg-1build4) ...
1823s Setting up libxcb-render0:arm64 (1.17.0-2) ...
1823s Setting up python3-defusedxml (0.7.1-2) ...
1823s Setting up libarchive-zip-perl (1.68-1) ...
1823s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ...
1823s Setting up libdrm-radeon1:arm64 (2.4.123-1) ...
1823s Setting up libglvnd0:arm64 (1.7.0-1build1) ...
1823s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
1823s Setting up python3-alabaster (0.7.16-0.1) ...
1823s Setting up python3-unicodedata2 (15.1.0+ds-1build2) ...
1823s Setting up fonts-lyx (2.4.2.1-1) ...
1823s Setting up libxcb-glx0:arm64 (1.17.0-2) ...
1823s Setting up python3-tenacity (8.5.0-0ubuntu1) ...
1823s Setting up libdebhelper-perl (13.20ubuntu1) ...
1823s Setting up python3-tqdm (4.67.0-1) ...
1823s Setting up libxcb-keysyms1:arm64 (0.4.0-1build4) ...
1823s Setting up libxcb-shape0:arm64 (1.17.0-2) ...
1823s Setting up python3-ruamel.yaml.clib:arm64 (0.2.8+ds-2) ...
1823s Setting up x11-common (1:7.7+23ubuntu3) ...
1824s Setting up python3-frozendict (1.2-3) ...
1824s Setting up libibumad3:arm64 (52.0-2ubuntu1) ...
1824s Setting up libdeflate0:arm64 (1.22-1) ...
1824s Setting up python3-tabulate (0.9.0-1) ...
1824s Setting up m4 (1.4.19-4build1) ...
1824s Setting up python3-latexcodec (3.0.0-1) ...
1824s Setting up libqhull-r8.0:arm64 (2020.2-6build1) ...
1824s Setting up libxcb-render-util0:arm64 (0.3.9-1build4) ...
1824s Setting up python3-all (3.12.6-0ubuntu1) ...
1824s Setting up libxcb-shm0:arm64 (1.17.0-2) ...
1824s Setting up libibmad5:arm64 (52.0-2ubuntu1) ...
1824s Setting up libxcb-icccm4:arm64 (0.4.2-1) ...
1824s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ...
1824s Setting up python3-networkx (3.2.1-4ubuntu1) ...
1826s Setting up python3-wheel (0.44.0-1) ...
1826s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ...
1826s Setting up python3-annotated-types (0.7.0-1) ...
1826s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu3) ...
1826s Setting up libaec0:arm64 (1.1.3-1) ...
1826s Setting up python3-platformdirs (4.3.6-1) ...
1826s Setting up libopengl0:arm64 (1.7.0-1build1) ...
1826s Setting up python3-tz (2024.1-2) ...
1826s Setting up libxcb-util1:arm64 (0.4.0-1build3) ...
1826s Setting up libxxf86vm1:arm64 (1:1.1.4-1build4) ...
1826s Setting up libxcb-xkb1:arm64 (1.17.0-2) ...
1826s Setting up libxcb-image0:arm64 (0.4.0-2build1) ...
1826s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ...
1826s Setting up libxcb-present0:arm64 (1.17.0-2) ...
1826s Setting up unicode-data (15.1.0-1) ...
1826s Setting up libsymspg2:arm64 (2.4.0-1ubuntu1) ...
1826s Setting up python3-six (1.16.0-7) ...
1826s Setting up python3-bson (4.7.3-2ubuntu2) ...
1826s Setting up python3-palettable (3.3.3-1) ...
1827s Setting up python3-roman (4.2-1) ...
1827s Setting up libqt5core5t64:arm64 (5.15.15+dfsg-1ubuntu1) ...
1827s Setting up python3-decorator (5.1.1-5) ...
1827s Setting up autotools-dev (20220109.1) ...
1827s Setting up libblas3:arm64 (3.12.0-3build2) ...
1827s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
1827s Setting up python3-packaging (24.1-1) ...
1827s Setting up libxcb-xinerama0:arm64 (1.17.0-2) ...
1827s Setting up libmunge2:arm64 (0.5.15-4build1) ...
1827s Setting up libllvm17t64:arm64 (1:17.0.6-18) ...
1827s Setting up libexpat1-dev:arm64 (2.6.4-1) ...
1827s Setting up python3-pyproject-hooks (1.2.0-1) ...
1827s Setting up libxfixes3:arm64 (1:6.0.0-2build1) ...
1827s Setting up libxcb-sync1:arm64 (1.17.0-2) ...
1827s Setting up python3-snowballstemmer (2.2.0-4build1) ...
1827s Setting up libboost-iostreams1.83.0:arm64 (1.83.0-3.2ubuntu2) ...
1827s Setting up python3-brotli (1.1.0-2build2) ...
1828s Setting up liblzf1:arm64 (3.6-4) ...
1828s Setting up python3-cycler (0.12.1-1) ...
1828s Setting up libimagequant0:arm64 (2.18.0-1build1) ...
1828s Setting up libxkbcommon-x11-0:arm64 (1.6.0-1build1) ...
1828s Setting up fonts-dejavu-mono (2.37-8) ...
1828s Setting up python3-kiwisolver (1.4.7-2build1) ...
1828s Setting up libhwloc15:arm64 (2.11.2-1) ...
1828s Setting up libmpc3:arm64 (1.3.1-1build2) ...
1828s Setting up cython3 (3.0.11+dfsg-1ubuntu2) ...
1829s Setting up libtcl8.6:arm64 (8.6.15+dfsg-2) ...
1829s Setting up autopoint (0.22.5-2) ...
1829s Setting up libjsoncpp25:arm64 (1.9.5-6build1) ...
1829s Setting up fonts-dejavu-core (2.37-8) ...
1829s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ...
1829s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ...
1829s Setting up python3-toml (0.10.2-1) ...
1829s Setting up python3-installer (0.7.0+dfsg1-3) ...
1829s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ...
1829s Setting up libvulkan1:arm64 (1.3.296.0-1) ...
1829s Setting up autoconf (2.72-3) ...
1829s Setting up python3-pluggy (1.5.0-1) ...
1829s Setting up libwebp7:arm64 (1.4.0-0.1) ...
1829s Setting up python3-pybtex (0.24.0-4) ...
1829s Setting up libubsan1:arm64 (14.2.0-8ubuntu1) ...
1829s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ...
1829s Setting up python3-fastjsonschema (2.20.0-1) ...
1829s Setting up python3-ruamel.yaml (0.18.6+ds-3) ...
1830s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
1830s Setting up dwz (0.15-1build6) ...
1830s Setting up libmtdev1t64:arm64 (1.1.6-1.2) ...
1830s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ...
1830s Setting up libxshmfence1:arm64 (1.3-1build5) ...
1830s Setting up libhwasan0:arm64 (14.2.0-8ubuntu1) ...
1830s Setting up python3-dnspython (2.6.1-1ubuntu1) ...
1830s Setting up libxcb-randr0:arm64 (1.17.0-2) ...
1830s Setting up python3-traitlets (5.14.3+really5.14.3-1) ...
1830s Setting up libasan8:arm64 (14.2.0-8ubuntu1) ...
1830s Setting up libjson-perl (4.10000-1) ...
1830s Setting up libxslt1.1:arm64 (1.1.39-0exp1ubuntu1) ...
1830s Setting up openmpi-common (4.1.6-13.3ubuntu2) ...
1830s Setting up debugedit (1:5.1-1) ...
1830s Setting up libmd4c0:arm64 (0.5.2-2) ...
1830s Setting up librdmacm1t64:arm64 (52.0-2ubuntu1) ...
1830s Setting up libopenjp2-7:arm64 (2.5.0-2ubuntu1) ...
1830s Setting up libharfbuzz0b:arm64 (10.0.1-1) ...
1830s Setting up python3-dateutil (2.9.0-2) ...
1830s Setting up python3-email-validator (2.2.0-1) ...
1830s Setting up sgml-base (1.31) ...
1830s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ...
1830s Setting up libxss1:arm64 (1:1.2.3-1build3) ...
1830s Setting up libtsan2:arm64 (14.2.0-8ubuntu1) ...
1830s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
1830s Setting up python3-mpmath (1.3.0-1) ...
1831s Setting up libisl23:arm64 (0.27-1) ...
1831s Setting up python3-build (1.2.2-1) ...
1831s Setting up python-matplotlib-data (3.8.3-3ubuntu1) ...
1831s Setting up libwebpmux3:arm64 (1.4.0-0.1) ...
1831s Setting up python3-appdirs (1.4.4-4) ...
1831s Setting up python3-soupsieve (2.6-1) ...
1831s Setting up pymatgen-test-files (2024.10.29-1) ...
1831s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
1831s Setting up sphinx-rtd-theme-common (3.0.1+dfsg-1) ...
1831s Setting up libcc1-0:arm64 (14.2.0-8ubuntu1) ...
1831s Setting up python3-jupyter-core (5.7.2-4) ...
1832s Setting up liblsan0:arm64 (14.2.0-8ubuntu1) ...
1832s Setting up libsz2:arm64 (1.1.3-1) ...
1832s Setting up libjs-bootstrap (3.4.1+dfsg-3) ...
1832s Setting up libitm1:arm64 (14.2.0-8ubuntu1) ...
1832s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
1832s Setting up libinchi1 (1.03+dfsg-4build1) ...
1832s Setting up python3-imagesize (1.4.1-1) ...
1832s Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ...
1832s Setting up libwacom-common (2.13.0-1) ...
1832s Setting up libwayland-client0:arm64 (1.23.0-1) ...
1832s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
1832s Setting up automake (1:1.16.5-1.3ubuntu1) ...
1832s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
1832s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
1832s Setting up libfabric1:arm64 (1.17.0-3ubuntu1) ...
1832s Setting up python3-sympy (1.13.3-1) ...
1839s Setting up libice6:arm64 (2:1.1.1-1) ...
1839s Setting up mesa-libgallium:arm64 (24.2.3-1ubuntu1) ...
1839s Setting up liblapack3:arm64 (3.12.0-3build2) ...
1839s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
1839s Setting up libqt5dbus5t64:arm64 (5.15.15+dfsg-1ubuntu1) ...
1839s Setting up gettext (0.22.5-2) ...
1839s Setting up libgbm1:arm64 (24.2.3-1ubuntu1) ...
1839s Setting up libwacom9:arm64 (2.13.0-1) ...
1839s Setting up pybuild-plugin-pyproject (6.20241024) ...
1839s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ...
1839s Setting up python3-pytest (8.3.3-1) ...
1839s Setting up libwebpdemux2:arm64 (1.4.0-0.1) ...
1839s Setting up libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ...
1839s Setting up libqt5network5t64:arm64 (5.15.15+dfsg-1ubuntu1) ...
1839s Setting up libpython3.12-dev:arm64 (3.12.7-3) ...
1839s Setting up python3-nbformat (5.9.1-1) ...
1839s Setting up libhwloc-plugins:arm64 (2.11.2-1) ...
1839s Setting up python3-bs4 (4.12.3-3) ...
1840s Setting up libinput-bin (1.26.2-1) ...
1840s Setting up libtbbbind-2-5:arm64 (2021.12.0-1ubuntu2) ...
1840s Setting up intltool-debian (0.35.0+20060710.6) ...
1840s Setting up libmaeparser1:arm64 (1.3.1-1build1) ...
1840s Setting up python3-fs (2.4.16-4) ...
1840s Setting up libegl-mesa0:arm64 (24.2.3-1ubuntu1) ...
1840s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
1840s Setting up packmol (1:20.14.3-1) ...
1840s Setting up python3-pydantic (2.9.1-1) ...
1840s Setting up libraqm0:arm64 (0.10.1-1build1) ...
1840s Setting up python3.12-dev (3.12.7-3) ...
1840s Setting up libpmix2t64:arm64 (5.0.3-2) ...
1840s Setting up python3-plotly (5.20.0+dfsg-1) ...
1847s Setting up python3-numpy (1:1.26.4+ds-11build1) ...
1849s Setting up libjs-sphinxdoc (7.4.7-4) ...
1849s Setting up dh-strip-nondeterminism (1.14.0-1) ...
1849s Setting up cpp-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
1849s Setting up python3-lxml:arm64 (5.3.0-1) ...
1849s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ...
1849s Setting up xml-core (0.19) ...
1849s Setting up libegl1:arm64 (1.7.0-1build1) ...
1849s Setting up python3-contourpy (1.3.0-2) ...
1849s Setting up python3-pydantic-settings (2.6.1-1) ...
1849s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ...
1849s Setting up libgcc-14-dev:arm64 (14.2.0-8ubuntu1) ...
1849s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ...
1849s Setting up python3-spglib (2.4.0-1ubuntu1) ...
1850s Setting up libstdc++-14-dev:arm64 (14.2.0-8ubuntu1) ...
1850s Setting up libsm6:arm64 (2:1.2.4-1) ...
1850s Setting up libhsakmt1:arm64 (5.7.0-1build1) ...
1850s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ...
1850s Setting up python3-uncertainties (3.2.2-1) ...
1850s Setting up libinput10:arm64 (1.26.2-1) ...
1850s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ...
1850s Setting up fontconfig (2.15.0-1.1ubuntu2) ...
1852s Regenerating fonts cache... done.
1852s Setting up libnetcdf19t64:arm64 (1:4.9.2-6ubuntu1) ...
1852s Setting up libxft2:arm64 (2.3.6-1build1) ...
1852s Setting up libglx-mesa0:arm64 (24.2.3-1ubuntu1) ...
1852s Setting up python3-scipy (1.13.1-5) ...
1855s Setting up libpython3-dev:arm64 (3.12.6-0ubuntu1) ...
1855s Setting up libglx0:arm64 (1.7.0-1build1) ...
1855s Setting up libproj25:arm64 (9.5.0-1) ...
1856s Setting up po-debconf (1.0.21+nmu1) ...
1856s Setting up libtk8.6:arm64 (8.6.15-1) ...
1856s Setting up python3-pandas-lib:arm64 (2.2.3+dfsg-5) ...
1856s Setting up python3.12-tk (3.12.7-3) ...
1856s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ...
1856s Setting up libtbb12:arm64 (2021.12.0-1ubuntu2) ...
1856s Setting up python-pymatgen-doc (2024.6.10+dfsg1-8) ...
1856s Setting up libcairo2:arm64 (1.18.2-2) ...
1856s Setting up python3-pil:arm64 (10.4.0-1ubuntu1) ...
1856s Setting up cpp-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
1856s Setting up libgl1:arm64 (1.7.0-1build1) ...
1856s Setting up python3-pandas (2.2.3+dfsg-5) ...
1862s Setting up libpython3-all-dev:arm64 (3.12.6-0ubuntu1) ...
1862s Setting up sphinx-common (7.4.7-4) ...
1862s Setting up python3-dev (3.12.6-0ubuntu1) ...
1862s Setting up python3-h5py (3.11.0-5ubuntu1) ...
1862s Setting up python3-cftime (1.6.4-1) ...
1862s Setting up libglew2.2:arm64 (2.2.0-4build1) ...
1862s Setting up cpp-14 (14.2.0-8ubuntu1) ...
1862s Setting up libhsa-runtime64-1 (5.7.1-2build1) ...
1862s Setting up cpp (4:14.1.0-2ubuntu1) ...
1862s Setting up libtheora0:arm64 (1.1.1+dfsg.1-17) ...
1862s Setting up python3-monty (2024.7.29-1) ...
1862s Setting up gcc-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
1862s Setting up python3-netcdf4 (1.7.2-1) ...
1862s Setting up python3-all-dev (3.12.6-0ubuntu1) ...
1862s Setting up gcc-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
1862s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ...
1862s Setting up g++-14-aarch64-linux-gnu (14.2.0-8ubuntu1) ...
1862s Setting up blt (2.5.3+dfsg-7build1) ...
1862s Setting up libopenbabel7 (3.1.1+dfsg-11ubuntu1) ...
1862s Setting up python3-tk:arm64 (3.12.6-1ubuntu1) ...
1862s Setting up libgl2ps1.4 (1.4.2+dfsg1-2build1) ...
1862s Setting up gcc-14 (14.2.0-8ubuntu1) ...
1862s Setting up libqt5gui5t64:arm64 (5.15.15+dfsg-1ubuntu1) ...
1862s Setting up libamdhip64-5 (5.7.1-5) ...
1862s Setting up python3-pil.imagetk:arm64 (10.4.0-1ubuntu1) ...
1862s Setting up g++-aarch64-linux-gnu (4:14.1.0-2ubuntu1) ...
1862s Setting up g++-14 (14.2.0-8ubuntu1) ...
1862s Setting up libucx0:arm64 (1.17.0+ds-3build1) ...
1862s Setting up python3-openbabel (3.1.1+dfsg-11ubuntu1) ...
1863s Setting up libtool (2.4.7-7build1) ...
1863s Setting up libqt5widgets5t64:arm64 (5.15.15+dfsg-1ubuntu1) ...
1863s Setting up gcc (4:14.1.0-2ubuntu1) ...
1863s Setting up dh-autoreconf (20) ...
1863s Setting up libopenmpi3t64:arm64 (4.1.6-13.3ubuntu2) ...
1863s Setting up g++ (4:14.1.0-2ubuntu1) ...
1863s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
1863s Setting up build-essential (12.10ubuntu1) ...
1863s Setting up openmpi-bin (4.1.6-13.3ubuntu2) ...
1863s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
1863s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
1863s Setting up mpi-default-bin (1.17) ...
1863s Setting up debhelper (13.20ubuntu1) ...
1863s Setting up python3-mpi4py (3.1.6-9ubuntu1) ...
1863s Setting up libvtk9.3:arm64 (9.3.0+dfsg1-1build1) ...
1863s Setting up libvtk9.3-qt:arm64 (9.3.0+dfsg1-1build1) ...
1863s Setting up python3-vtk9 (9.3.0+dfsg1-1build1) ...
1863s /usr/lib/python3/dist-packages/vtkmodules/util/vtkMethodParser.py:304: SyntaxWarning: invalid escape sequence '\S'
1863s   patn = re.compile ("  \S")
1863s Setting up python3-fonttools (4.46.0-1build2) ...
1864s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ...
1864s Setting up python3-matplotlib (3.8.3-3ubuntu1) ...
1866s Setting up python3-ase (3.23.0-1) ...
1868s Setting up python3-phonopy (2.23.1-1) ...
1868s Setting up python3-pymatgen (2024.6.10+dfsg1-8) ...
1869s /usr/lib/python3/dist-packages/pymatgen/io/lammps/outputs.py:115: SyntaxWarning: invalid escape sequence '\+'
1869s   pattern = file_pattern.replace("+","\+").replace("*", "([0-9]+)").replace("\\", "\\\\")
1870s Setting up python3-emmet-core (0.76.2-1) ...
1870s Processing triggers for libc-bin (2.40-1ubuntu3) ...
1870s Processing triggers for man-db (2.13.0-1) ...
1872s Processing triggers for udev (256.5-2ubuntu4) ...
1872s Processing triggers for install-info (7.1.1-1) ...
1873s Processing triggers for sgml-base (1.31) ...
1873s Setting up docutils-common (0.21.2+dfsg-2) ...
1873s Processing triggers for sgml-base (1.31) ...
1873s Setting up python3-docutils (0.21.2+dfsg-2) ...
1873s Setting up python3-sphinx (7.4.7-4) ...
1874s Setting up python3-sphinxcontrib.jquery (4.1-5) ...
1874s Setting up python3-sphinx-rtd-theme (3.0.1+dfsg-1) ...
1874s Setting up autopkgtest-satdep (0) ...
1886s (Reading database ... 122914 files and directories currently installed.)
1886s Removing autopkgtest-satdep (0) ...
1893s autopkgtest [03:08:41]: test test-pymatgen-net: [-----------------------
1893s running network tests with NET_TEST_LIST=test_get_structure_by_id
1893s ============================= test session starts ==============================
1893s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3
1893s cachedir: .pytest_cache
1893s rootdir: /tmp/autopkgtest.9Td4bJ/build.Atq/src
1893s configfile: pyproject.toml
1893s plugins: typeguard-4.4.1
1919s collecting ... collected 2924 items / 2923 deselected / 2 skipped / 1 selected
1919s 
1919s tests/ext/test_cod.py::TestCOD::test_get_structure_by_id PASSED          [100%]
1919s 
1919s ============================= slowest 30 durations =============================
1919s 0.23s call     tests/ext/test_cod.py::TestCOD::test_get_structure_by_id
1919s 
1919s (2 durations < 0.005s hidden.  Use -vv to show these durations.)
1919s =========================== short test summary info ============================
1919s SKIPPED [1] tests/io/test_openff.py:25: could not import 'openff.toolkit': No module named 'openff'
1919s SKIPPED [1] tests/io/test_shengbte.py:11: could not import 'f90nml': No module named 'f90nml'
1919s ================ 1 passed, 2 skipped, 2923 deselected in 26.18s ================
1921s autopkgtest [03:09:09]: test test-pymatgen-net: -----------------------]
1922s autopkgtest [03:09:10]: test test-pymatgen-net:  - - - - - - - - - - results - - - - - - - - - -
1922s test-pymatgen-net    PASS
1922s autopkgtest [03:09:10]: @@@@@@@@@@@@@@@@@@@@ summary
1922s test-pymatgen        PASS
1922s test-pymatgen-net    PASS
1935s nova [W] Skipping flock in bos03-arm64
1935s Creating nova instance adt-plucky-arm64-pymatgen-20241115-023707-juju-7f2275-prod-proposed-migration-environment-15-6238ebf4-f511-4ce2-ba11-0367d211517a from image adt/ubuntu-plucky-arm64-server-20241114.img (UUID 4472f5f7-859f-4441-9e8e-9550fb35f210)...
1935s nova [W] Skipping flock in bos03-arm64
1935s Creating nova instance adt-plucky-arm64-pymatgen-20241115-023707-juju-7f2275-prod-proposed-migration-environment-15-6238ebf4-f511-4ce2-ba11-0367d211517a from image adt/ubuntu-plucky-arm64-server-20241114.img (UUID 4472f5f7-859f-4441-9e8e-9550fb35f210)...