0s autopkgtest [14:11:04]: starting date and time: 2025-01-17 14:11:04+0000 0s autopkgtest [14:11:04]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [14:11:04]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.wgdo1trg/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:plip --apt-upgrade plip --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=plip/2.4.0+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-3.secgroup --name adt-plucky-arm64-plip-20250117-141104-juju-7f2275-prod-proposed-migration-environment-20-361d6b35-7c3d-414d-a6fd-2e74c1f87490 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 116s autopkgtest [14:13:00]: testbed dpkg architecture: arm64 116s autopkgtest [14:13:00]: testbed apt version: 2.9.18 116s autopkgtest [14:13:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup 117s autopkgtest [14:13:01]: testbed release detected to be: None 118s autopkgtest [14:13:01]: updating testbed package index (apt update) 118s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 118s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 118s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 118s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 118s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.7 kB] 118s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 118s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [877 kB] 118s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [177 kB] 118s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [318 kB] 118s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [57.8 kB] 118s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [1079 kB] 119s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [11.2 kB] 119s Fetched 2618 kB in 1s (2519 kB/s) 120s Reading package lists... 120s Reading package lists... 121s Building dependency tree... 121s Reading state information... 121s Calculating upgrade... 122s The following packages will be upgraded: 122s libgudev-1.0-0 usb.ids 122s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 122s Need to get 238 kB of archives. 122s After this operation, 1024 B of additional disk space will be used. 122s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 usb.ids all 2025.01.14-1 [223 kB] 122s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgudev-1.0-0 arm64 1:238-6 [14.9 kB] 123s Fetched 238 kB in 1s (466 kB/s) 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 123s Preparing to unpack .../usb.ids_2025.01.14-1_all.deb ... 123s Unpacking usb.ids (2025.01.14-1) over (2024.12.04-1) ... 123s Preparing to unpack .../libgudev-1.0-0_1%3a238-6_arm64.deb ... 123s Unpacking libgudev-1.0-0:arm64 (1:238-6) over (1:238-5ubuntu1) ... 123s Setting up usb.ids (2025.01.14-1) ... 123s Setting up libgudev-1.0-0:arm64 (1:238-6) ... 123s Processing triggers for libc-bin (2.40-4ubuntu1) ... 124s Reading package lists... 124s Building dependency tree... 124s Reading state information... 125s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 125s autopkgtest [14:13:09]: upgrading testbed (apt dist-upgrade and autopurge) 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 126s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 126s Starting 2 pkgProblemResolver with broken count: 0 126s Done 127s Entering ResolveByKeep 127s 127s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 128s Reading package lists... 128s Building dependency tree... 128s Reading state information... 128s Starting pkgProblemResolver with broken count: 0 128s Starting 2 pkgProblemResolver with broken count: 0 128s Done 129s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 132s autopkgtest [14:13:16]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 132s autopkgtest [14:13:16]: @@@@@@@@@@@@@@@@@@@@ apt-source plip 134s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe plip 2.4.0+dfsg-1 (dsc) [2061 B] 134s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe plip 2.4.0+dfsg-1 (tar) [82.6 kB] 134s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe plip 2.4.0+dfsg-1 (diff) [6056 B] 134s gpgv: Signature made Tue Jan 14 14:06:03 2025 UTC 134s gpgv: using RSA key B1A51EB2779DD01743CC19BA1CF792111B5228B0 134s gpgv: Can't check signature: No public key 134s dpkg-source: warning: cannot verify inline signature for ./plip_2.4.0+dfsg-1.dsc: no acceptable signature found 134s autopkgtest [14:13:18]: testing package plip version 2.4.0+dfsg-1 134s autopkgtest [14:13:18]: build not needed 135s autopkgtest [14:13:19]: test xml-parser: preparing testbed 135s Reading package lists... 135s Building dependency tree... 135s Reading state information... 136s Starting pkgProblemResolver with broken count: 0 136s Starting 2 pkgProblemResolver with broken count: 0 136s Done 136s The following NEW packages will be installed: 136s fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 136s libboost-iostreams1.83.0 libcairo2 libfontconfig1 libgfortran5 libgomp1 136s libinchi1.07 liblapack3 libmaeparser1 libopenbabel7 libpixman-1-0 136s libxcb-render0 libxcb-shm0 libxrender1 plip python3-numpy python3-openbabel 137s 0 upgraded, 20 newly installed, 0 to remove and 0 not upgraded. 137s Need to get 14.3 MB of archives. 137s After this operation, 68.2 MB of additional disk space will be used. 137s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 137s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 137s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 137s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB] 137s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libboost-iostreams1.83.0 arm64 1.83.0-4ubuntu1 [259 kB] 137s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 137s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 137s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 137s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 137s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 137s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 137s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-12ubuntu1 [437 kB] 137s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-12ubuntu1 [145 kB] 137s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 libinchi1.07 arm64 1.07.1+dfsg-6 [574 kB] 137s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB] 137s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaeparser1 arm64 1.3.1-1build1 [84.5 kB] 137s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 libopenbabel7 arm64 3.1.1+dfsg-11ubuntu2 [3181 kB] 138s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-openbabel arm64 3.1.1+dfsg-11ubuntu2 [607 kB] 138s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-12 [4153 kB] 138s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 plip all 2.4.0+dfsg-1 [84.4 kB] 138s Fetched 14.3 MB in 1s (12.8 MB/s) 138s Selecting previously unselected package fonts-dejavu-mono. 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80204 files and directories currently installed.) 138s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 138s Unpacking fonts-dejavu-mono (2.37-8) ... 138s Selecting previously unselected package fonts-dejavu-core. 138s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 138s Unpacking fonts-dejavu-core (2.37-8) ... 138s Selecting previously unselected package fontconfig-config. 138s Preparing to unpack .../02-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 138s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 139s Selecting previously unselected package libblas3:arm64. 139s Preparing to unpack .../03-libblas3_3.12.0-4_arm64.deb ... 139s Unpacking libblas3:arm64 (3.12.0-4) ... 139s Selecting previously unselected package libboost-iostreams1.83.0:arm64. 139s Preparing to unpack .../04-libboost-iostreams1.83.0_1.83.0-4ubuntu1_arm64.deb ... 139s Unpacking libboost-iostreams1.83.0:arm64 (1.83.0-4ubuntu1) ... 139s Selecting previously unselected package libfontconfig1:arm64. 139s Preparing to unpack .../05-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 139s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 139s Selecting previously unselected package libpixman-1-0:arm64. 139s Preparing to unpack .../06-libpixman-1-0_0.44.0-3_arm64.deb ... 139s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 139s Selecting previously unselected package libxcb-render0:arm64. 139s Preparing to unpack .../07-libxcb-render0_1.17.0-2_arm64.deb ... 139s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 139s Selecting previously unselected package libxcb-shm0:arm64. 139s Preparing to unpack .../08-libxcb-shm0_1.17.0-2_arm64.deb ... 139s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 139s Selecting previously unselected package libxrender1:arm64. 139s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 139s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 139s Selecting previously unselected package libcairo2:arm64. 139s Preparing to unpack .../10-libcairo2_1.18.2-2_arm64.deb ... 139s Unpacking libcairo2:arm64 (1.18.2-2) ... 139s Selecting previously unselected package libgfortran5:arm64. 139s Preparing to unpack .../11-libgfortran5_14.2.0-12ubuntu1_arm64.deb ... 139s Unpacking libgfortran5:arm64 (14.2.0-12ubuntu1) ... 139s Selecting previously unselected package libgomp1:arm64. 139s Preparing to unpack .../12-libgomp1_14.2.0-12ubuntu1_arm64.deb ... 139s Unpacking libgomp1:arm64 (14.2.0-12ubuntu1) ... 139s Selecting previously unselected package libinchi1.07. 139s Preparing to unpack .../13-libinchi1.07_1.07.1+dfsg-6_arm64.deb ... 139s Unpacking libinchi1.07 (1.07.1+dfsg-6) ... 139s Selecting previously unselected package liblapack3:arm64. 139s Preparing to unpack .../14-liblapack3_3.12.0-4_arm64.deb ... 139s Unpacking liblapack3:arm64 (3.12.0-4) ... 139s Selecting previously unselected package libmaeparser1:arm64. 139s Preparing to unpack .../15-libmaeparser1_1.3.1-1build1_arm64.deb ... 139s Unpacking libmaeparser1:arm64 (1.3.1-1build1) ... 139s Selecting previously unselected package libopenbabel7. 139s Preparing to unpack .../16-libopenbabel7_3.1.1+dfsg-11ubuntu2_arm64.deb ... 139s Unpacking libopenbabel7 (3.1.1+dfsg-11ubuntu2) ... 139s Selecting previously unselected package python3-openbabel. 139s Preparing to unpack .../17-python3-openbabel_3.1.1+dfsg-11ubuntu2_arm64.deb ... 139s Unpacking python3-openbabel (3.1.1+dfsg-11ubuntu2) ... 139s Selecting previously unselected package python3-numpy. 139s Preparing to unpack .../18-python3-numpy_1%3a1.26.4+ds-12_arm64.deb ... 139s Unpacking python3-numpy (1:1.26.4+ds-12) ... 140s Selecting previously unselected package plip. 140s Preparing to unpack .../19-plip_2.4.0+dfsg-1_all.deb ... 140s Unpacking plip (2.4.0+dfsg-1) ... 140s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 140s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 140s Setting up libxcb-render0:arm64 (1.17.0-2) ... 140s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 140s Setting up libgomp1:arm64 (14.2.0-12ubuntu1) ... 140s Setting up libblas3:arm64 (3.12.0-4) ... 140s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 140s Setting up libboost-iostreams1.83.0:arm64 (1.83.0-4ubuntu1) ... 140s Setting up fonts-dejavu-mono (2.37-8) ... 140s Setting up fonts-dejavu-core (2.37-8) ... 140s Setting up libgfortran5:arm64 (14.2.0-12ubuntu1) ... 140s Setting up libinchi1.07 (1.07.1+dfsg-6) ... 140s Setting up liblapack3:arm64 (3.12.0-4) ... 140s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 140s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 140s Setting up libmaeparser1:arm64 (1.3.1-1build1) ... 140s Setting up python3-numpy (1:1.26.4+ds-12) ... 142s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 142s Setting up libcairo2:arm64 (1.18.2-2) ... 142s Setting up libopenbabel7 (3.1.1+dfsg-11ubuntu2) ... 142s Setting up python3-openbabel (3.1.1+dfsg-11ubuntu2) ... 142s Setting up plip (2.4.0+dfsg-1) ... 143s Processing triggers for man-db (2.13.0-1) ... 144s Processing triggers for libc-bin (2.40-4ubuntu1) ... 145s autopkgtest [14:13:29]: test xml-parser: [----------------------- 145s Traceback (most recent call last): 145s File "/tmp/autopkgtest.fbvY1N/build.yLQ/src/plip/test/test_xml_parser.py", line 10, in 145s from plip.exchange.xml import PlipXML 145s File "/usr/lib/python3/dist-packages/plip/exchange/xml.py", line 1, in 145s from lxml import etree 145s ModuleNotFoundError: No module named 'lxml' 145s autopkgtest [14:13:29]: test xml-parser: -----------------------] 146s autopkgtest [14:13:30]: test xml-parser: - - - - - - - - - - results - - - - - - - - - - 146s xml-parser FAIL non-zero exit status 1 146s autopkgtest [14:13:30]: test xml-parser: - - - - - - - - - - stderr - - - - - - - - - - 146s Traceback (most recent call last): 146s File "/tmp/autopkgtest.fbvY1N/build.yLQ/src/plip/test/test_xml_parser.py", line 10, in 146s from plip.exchange.xml import PlipXML 146s File "/usr/lib/python3/dist-packages/plip/exchange/xml.py", line 1, in 146s from lxml import etree 146s ModuleNotFoundError: No module named 'lxml' 147s autopkgtest [14:13:31]: @@@@@@@@@@@@@@@@@@@@ summary 147s xml-parser FAIL non-zero exit status 1 176s nova [W] Using flock in prodstack6-arm64 176s Creating nova instance adt-plucky-arm64-plip-20250117-141104-juju-7f2275-prod-proposed-migration-environment-20-361d6b35-7c3d-414d-a6fd-2e74c1f87490 from image adt/ubuntu-plucky-arm64-server-20250117.img (UUID 16a981e8-12f4-4912-806e-ebb4c2361146)... 176s nova [W] Timed out waiting for fb649802-9124-4505-9821-46aa54153f36 to get deleted.