0s autopkgtest [12:03:00]: starting date and time: 2025-02-19 12:03:00+0000 0s autopkgtest [12:03:00]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [12:03:00]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.etqs4u9u/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:sphinx --apt-upgrade nipy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=sphinx/8.1.3-5 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-29.secgroup --name adt-plucky-arm64-nipy-20250219-120300-juju-7f2275-prod-proposed-migration-environment-15-6c68e3fc-aca5-4723-8996-3cde6334bad8 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 168s autopkgtest [12:05:48]: testbed dpkg architecture: arm64 168s autopkgtest [12:05:48]: testbed apt version: 2.9.29 169s autopkgtest [12:05:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 169s autopkgtest [12:05:49]: testbed release detected to be: None 170s autopkgtest [12:05:50]: updating testbed package index (apt update) 170s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 170s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 170s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 170s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 170s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.9 kB] 170s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.1 kB] 170s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [750 kB] 171s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [3120 B] 171s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [93.3 kB] 171s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [7960 B] 171s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [686 kB] 171s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [11.2 kB] 171s Fetched 1752 kB in 1s (1727 kB/s) 172s Reading package lists... 172s + lsb_release --codename --short 172s + RELEASE=plucky 172s + cat 172s + [ plucky != trusty ] 172s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 172s Reading package lists... 173s Building dependency tree... 173s Reading state information... 173s Calculating upgrade... 174s The following NEW packages will be installed: 174s libapt-pkg7.0 174s The following packages will be upgraded: 174s apt apt-utils iproute2 liblsof0 libp11-kit0 lsof rsyslog 174s 7 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 174s Need to get 4842 kB of archives. 174s After this operation, 3409 kB of additional disk space will be used. 174s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libapt-pkg7.0 arm64 2.9.30 [1023 kB] 174s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 apt arm64 2.9.30 [1364 kB] 174s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 apt-utils arm64 2.9.30 [207 kB] 174s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 iproute2 arm64 6.13.0-1ubuntu1 [1158 kB] 174s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libp11-kit0 arm64 0.25.5-2ubuntu3 [280 kB] 174s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 rsyslog arm64 8.2412.0-2ubuntu1 [521 kB] 174s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 lsof arm64 4.99.4+dfsg-1 [236 kB] 174s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsof0 arm64 4.99.4+dfsg-1 [53.9 kB] 175s Preconfiguring packages ... 175s Fetched 4842 kB in 1s (6015 kB/s) 175s Selecting previously unselected package libapt-pkg7.0:arm64. 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116620 files and directories currently installed.) 175s Preparing to unpack .../libapt-pkg7.0_2.9.30_arm64.deb ... 175s Unpacking libapt-pkg7.0:arm64 (2.9.30) ... 176s Setting up libapt-pkg7.0:arm64 (2.9.30) ... 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116669 files and directories currently installed.) 176s Preparing to unpack .../archives/apt_2.9.30_arm64.deb ... 176s Unpacking apt (2.9.30) over (2.9.29) ... 176s Setting up apt (2.9.30) ... 177s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116669 files and directories currently installed.) 177s Preparing to unpack .../0-apt-utils_2.9.30_arm64.deb ... 177s Unpacking apt-utils (2.9.30) over (2.9.29) ... 177s Preparing to unpack .../1-iproute2_6.13.0-1ubuntu1_arm64.deb ... 177s Unpacking iproute2 (6.13.0-1ubuntu1) over (6.10.0-2ubuntu1) ... 177s Preparing to unpack .../2-libp11-kit0_0.25.5-2ubuntu3_arm64.deb ... 177s Unpacking libp11-kit0:arm64 (0.25.5-2ubuntu3) over (0.25.5-2ubuntu2) ... 177s Preparing to unpack .../3-rsyslog_8.2412.0-2ubuntu1_arm64.deb ... 177s Unpacking rsyslog (8.2412.0-2ubuntu1) over (8.2412.0-1ubuntu1) ... 177s Preparing to unpack .../4-lsof_4.99.4+dfsg-1_arm64.deb ... 177s Unpacking lsof (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 178s Preparing to unpack .../5-liblsof0_4.99.4+dfsg-1_arm64.deb ... 178s Unpacking liblsof0 (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 178s Setting up apt-utils (2.9.30) ... 178s Setting up liblsof0 (4.99.4+dfsg-1) ... 178s Setting up iproute2 (6.13.0-1ubuntu1) ... 178s Setting up rsyslog (8.2412.0-2ubuntu1) ... 178s info: The user `syslog' is already a member of `adm'. 179s Setting up libp11-kit0:arm64 (0.25.5-2ubuntu3) ... 179s Setting up lsof (4.99.4+dfsg-1) ... 179s Processing triggers for man-db (2.13.0-1) ... 182s Processing triggers for libc-bin (2.40-4ubuntu1) ... 182s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 182s + /usr/lib/apt/apt-helper analyze-pattern ?true 182s + uname -r 182s + sed s/\./\\./g 182s + running_kernel_pattern=^linux-.*6\.12\.0-15-generic.* 182s + apt list ?obsolete 182s + tail -n+2 182s + cut -d/ -f1 182s + grep -v ^linux-.*6\.12\.0-15-generic.* 183s + true 183s + obsolete_pkgs= 183s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove 183s Reading package lists... 183s Building dependency tree... 183s Reading state information... 184s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 184s + grep -q trusty /etc/lsb-release 184s + [ ! -d /usr/share/doc/unattended-upgrades ] 184s + [ ! -d /usr/share/doc/lxd ] 184s + [ ! -d /usr/share/doc/lxd-client ] 184s + [ ! -d /usr/share/doc/snapd ] 184s + type iptables 184s + cat 184s + chmod 755 /etc/rc.local 184s + . /etc/rc.local 184s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 184s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 184s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 184s + uname -m 184s + [ aarch64 = ppc64le ] 184s + [ -d /run/systemd/system ] 184s + systemd-detect-virt --quiet --vm 184s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 184s + cat 184s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 184s + echo COMPRESS=lz4 184s autopkgtest [12:06:04]: upgrading testbed (apt dist-upgrade and autopurge) 184s Reading package lists... 185s Building dependency tree... 185s Reading state information... 185s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 185s Starting 2 pkgProblemResolver with broken count: 0 185s Done 186s Entering ResolveByKeep 186s 187s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 187s Reading package lists... 187s Building dependency tree... 187s Reading state information... 188s Starting pkgProblemResolver with broken count: 0 188s Starting 2 pkgProblemResolver with broken count: 0 188s Done 189s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 189s autopkgtest [12:06:09]: rebooting testbed after setup commands that affected boot 212s autopkgtest [12:06:32]: testbed running kernel: Linux 6.12.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Tue Feb 4 15:49:33 UTC 2025 215s autopkgtest [12:06:35]: @@@@@@@@@@@@@@@@@@@@ apt-source nipy 219s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nipy 0.6.1-1build2 (dsc) [2509 B] 219s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nipy 0.6.1-1build2 (tar) [1653 kB] 219s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nipy 0.6.1-1build2 (diff) [12.5 kB] 220s gpgv: Signature made Wed Jan 29 22:33:34 2025 UTC 220s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 220s gpgv: Can't check signature: No public key 220s dpkg-source: warning: cannot verify inline signature for ./nipy_0.6.1-1build2.dsc: no acceptable signature found 220s autopkgtest [12:06:40]: testing package nipy version 0.6.1-1build2 220s autopkgtest [12:06:40]: build not needed 221s autopkgtest [12:06:41]: test command1: preparing testbed 222s Reading package lists... 222s Building dependency tree... 222s Reading state information... 222s Starting pkgProblemResolver with broken count: 0 222s Starting 2 pkgProblemResolver with broken count: 0 222s Done 223s The following NEW packages will be installed: 223s fonts-mathjax libblas3 libgfortran5 libjs-jquery libjs-mathjax 223s libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 python-nipy-doc 223s python3-decorator python3-iniconfig python3-mpmath python3-nibabel 223s python3-nipy python3-nipy-lib python3-numpy python3-packaging python3-pluggy 223s python3-pytest python3-scipy python3-sympy python3-transforms3d 224s 0 upgraded, 23 newly installed, 0 to remove and 0 not upgraded. 224s Need to get 47.6 MB of archives. 224s After this operation, 252 MB of additional disk space will be used. 224s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 225s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 225s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250213-1ubuntu1 [443 kB] 225s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 225s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 225s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libjs-sphinxdoc all 8.1.3-5 [31.0 kB] 225s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 226s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 226s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 226s Get:10 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 226s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-mpmath all 1.3.0-1 [425 kB] 226s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-13 [4148 kB] 227s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.2-1 [51.5 kB] 227s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.14.1-4ubuntu1 [19.5 MB] 229s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-nibabel all 5.3.2-2 [2701 kB] 229s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sympy all 1.13.3-1 [4228 kB] 230s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-transforms3d all 0.4.2+ds-1 [1359 kB] 230s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-nipy-lib arm64 0.6.1-1build2 [895 kB] 230s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-nipy all 0.6.1-1build2 [727 kB] 230s Get:20 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 230s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.4-1 [252 kB] 230s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 231s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 python-nipy-doc all 0.6.1-1build2 [1970 kB] 232s Fetched 47.6 MB in 8s (5775 kB/s) 232s Selecting previously unselected package fonts-mathjax. 233s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116670 files and directories currently installed.) 233s Preparing to unpack .../00-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 233s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 233s Selecting previously unselected package libblas3:arm64. 233s Preparing to unpack .../01-libblas3_3.12.1-2_arm64.deb ... 233s Unpacking libblas3:arm64 (3.12.1-2) ... 233s Selecting previously unselected package libgfortran5:arm64. 233s Preparing to unpack .../02-libgfortran5_15-20250213-1ubuntu1_arm64.deb ... 233s Unpacking libgfortran5:arm64 (15-20250213-1ubuntu1) ... 233s Selecting previously unselected package libjs-jquery. 233s Preparing to unpack .../03-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 233s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 233s Selecting previously unselected package libjs-underscore. 233s Preparing to unpack .../04-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 233s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 233s Selecting previously unselected package libjs-sphinxdoc. 233s Preparing to unpack .../05-libjs-sphinxdoc_8.1.3-5_all.deb ... 233s Unpacking libjs-sphinxdoc (8.1.3-5) ... 233s Selecting previously unselected package liblapack3:arm64. 233s Preparing to unpack .../06-liblapack3_3.12.1-2_arm64.deb ... 233s Unpacking liblapack3:arm64 (3.12.1-2) ... 233s Selecting previously unselected package liblbfgsb0:arm64. 233s Preparing to unpack .../07-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ... 233s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 233s Selecting previously unselected package python3-decorator. 233s Preparing to unpack .../08-python3-decorator_5.1.1-5_all.deb ... 233s Unpacking python3-decorator (5.1.1-5) ... 233s Selecting previously unselected package python3-iniconfig. 233s Preparing to unpack .../09-python3-iniconfig_1.1.1-2_all.deb ... 233s Unpacking python3-iniconfig (1.1.1-2) ... 233s Selecting previously unselected package python3-mpmath. 233s Preparing to unpack .../10-python3-mpmath_1.3.0-1_all.deb ... 233s Unpacking python3-mpmath (1.3.0-1) ... 233s Selecting previously unselected package python3-numpy. 233s Preparing to unpack .../11-python3-numpy_1%3a1.26.4+ds-13_arm64.deb ... 233s Unpacking python3-numpy (1:1.26.4+ds-13) ... 234s Selecting previously unselected package python3-packaging. 234s Preparing to unpack .../12-python3-packaging_24.2-1_all.deb ... 234s Unpacking python3-packaging (24.2-1) ... 234s Selecting previously unselected package python3-scipy. 234s Preparing to unpack .../13-python3-scipy_1.14.1-4ubuntu1_arm64.deb ... 234s Unpacking python3-scipy (1.14.1-4ubuntu1) ... 234s Selecting previously unselected package python3-nibabel. 234s Preparing to unpack .../14-python3-nibabel_5.3.2-2_all.deb ... 234s Unpacking python3-nibabel (5.3.2-2) ... 234s Selecting previously unselected package python3-sympy. 234s Preparing to unpack .../15-python3-sympy_1.13.3-1_all.deb ... 234s Unpacking python3-sympy (1.13.3-1) ... 235s Selecting previously unselected package python3-transforms3d. 235s Preparing to unpack .../16-python3-transforms3d_0.4.2+ds-1_all.deb ... 235s Unpacking python3-transforms3d (0.4.2+ds-1) ... 235s Selecting previously unselected package python3-nipy-lib:arm64. 235s Preparing to unpack .../17-python3-nipy-lib_0.6.1-1build2_arm64.deb ... 235s Unpacking python3-nipy-lib:arm64 (0.6.1-1build2) ... 235s Selecting previously unselected package python3-nipy. 235s Preparing to unpack .../18-python3-nipy_0.6.1-1build2_all.deb ... 235s Unpacking python3-nipy (0.6.1-1build2) ... 235s Selecting previously unselected package python3-pluggy. 235s Preparing to unpack .../19-python3-pluggy_1.5.0-1_all.deb ... 235s Unpacking python3-pluggy (1.5.0-1) ... 235s Selecting previously unselected package python3-pytest. 235s Preparing to unpack .../20-python3-pytest_8.3.4-1_all.deb ... 235s Unpacking python3-pytest (8.3.4-1) ... 235s Selecting previously unselected package libjs-mathjax. 235s Preparing to unpack .../21-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 235s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 236s Selecting previously unselected package python-nipy-doc. 236s Preparing to unpack .../22-python-nipy-doc_0.6.1-1build2_all.deb ... 236s Unpacking python-nipy-doc (0.6.1-1build2) ... 236s Setting up python3-iniconfig (1.1.1-2) ... 236s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 236s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 236s Setting up python3-decorator (5.1.1-5) ... 237s Setting up libblas3:arm64 (3.12.1-2) ... 237s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 237s Setting up python3-packaging (24.2-1) ... 237s Setting up libgfortran5:arm64 (15-20250213-1ubuntu1) ... 237s Setting up python3-pluggy (1.5.0-1) ... 237s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 237s Setting up python3-mpmath (1.3.0-1) ... 237s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 237s Setting up python3-sympy (1.13.3-1) ... 244s Setting up liblapack3:arm64 (3.12.1-2) ... 244s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 244s Setting up python3-pytest (8.3.4-1) ... 245s Setting up python3-numpy (1:1.26.4+ds-13) ... 247s Setting up libjs-sphinxdoc (8.1.3-5) ... 247s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 247s Setting up python3-transforms3d (0.4.2+ds-1) ... 247s Setting up python3-scipy (1.14.1-4ubuntu1) ... 251s Setting up python-nipy-doc (0.6.1-1build2) ... 251s Setting up python3-nibabel (5.3.2-2) ... 251s Setting up python3-nipy-lib:arm64 (0.6.1-1build2) ... 251s Setting up python3-nipy (0.6.1-1build2) ... 252s Processing triggers for man-db (2.13.0-1) ... 253s Processing triggers for libc-bin (2.40-4ubuntu1) ... 254s autopkgtest [12:07:14]: test command1: cd debian/tests && python3 -m pytest nipy_test.py 254s autopkgtest [12:07:14]: test command1: [----------------------- 255s ============================= test session starts ============================== 255s platform linux -- Python 3.13.2, pytest-8.3.4, pluggy-1.5.0 255s rootdir: /tmp/autopkgtest.N7UD3x/build.MIM/src 255s configfile: pyproject.toml 255s plugins: typeguard-4.4.1 255s collected 4 items 255s 255s nipy_test.py .... [100%] 255s 255s =============================== warnings summary =============================== 255s debian/tests/nipy_test.py::test_image_save_to_file 255s /usr/lib/python3/dist-packages/nipy/io/files.py:141: FutureWarning: Default `strict` currently False; this will change to True in a future version of nipy 255s ni_img = nipy2nifti(img, data_dtype = io_dtype) 255s 255s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 255s ========================= 4 passed, 1 warning in 0.27s ========================= 256s autopkgtest [12:07:16]: test command1: -----------------------] 256s autopkgtest [12:07:16]: test command1: - - - - - - - - - - results - - - - - - - - - - 256s command1 PASS 257s autopkgtest [12:07:17]: test autodep8-python3: preparing testbed 527s autopkgtest [12:11:47]: testbed dpkg architecture: arm64 528s autopkgtest [12:11:48]: testbed apt version: 2.9.29 528s autopkgtest [12:11:48]: @@@@@@@@@@@@@@@@@@@@ test bed setup 528s autopkgtest [12:11:48]: testbed release detected to be: plucky 529s autopkgtest [12:11:49]: updating testbed package index (apt update) 529s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 530s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 530s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 530s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 530s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.9 kB] 530s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [3120 B] 530s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [750 kB] 530s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.1 kB] 530s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [93.3 kB] 530s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [7960 B] 530s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [686 kB] 530s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [11.2 kB] 530s Fetched 1752 kB in 1s (1759 kB/s) 531s Reading package lists... 532s + lsb_release --codename --short 532s + RELEASE=plucky 532s + cat 532s + [ plucky != trusty ] 532s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 532s Reading package lists... 533s Building dependency tree... 533s Reading state information... 534s Calculating upgrade... 535s The following NEW packages will be installed: 535s libapt-pkg7.0 535s The following packages will be upgraded: 535s apt apt-utils iproute2 liblsof0 libp11-kit0 lsof rsyslog 535s 7 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 535s Need to get 4842 kB of archives. 535s After this operation, 3409 kB of additional disk space will be used. 535s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libapt-pkg7.0 arm64 2.9.30 [1023 kB] 536s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 apt arm64 2.9.30 [1364 kB] 536s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 apt-utils arm64 2.9.30 [207 kB] 536s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 iproute2 arm64 6.13.0-1ubuntu1 [1158 kB] 536s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libp11-kit0 arm64 0.25.5-2ubuntu3 [280 kB] 536s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 rsyslog arm64 8.2412.0-2ubuntu1 [521 kB] 537s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 lsof arm64 4.99.4+dfsg-1 [236 kB] 537s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 liblsof0 arm64 4.99.4+dfsg-1 [53.9 kB] 537s Preconfiguring packages ... 537s Fetched 4842 kB in 1s (3267 kB/s) 537s Selecting previously unselected package libapt-pkg7.0:arm64. 538s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116620 files and directories currently installed.) 538s Preparing to unpack .../libapt-pkg7.0_2.9.30_arm64.deb ... 538s Unpacking libapt-pkg7.0:arm64 (2.9.30) ... 538s Setting up libapt-pkg7.0:arm64 (2.9.30) ... 538s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116669 files and directories currently installed.) 538s Preparing to unpack .../archives/apt_2.9.30_arm64.deb ... 538s Unpacking apt (2.9.30) over (2.9.29) ... 539s Setting up apt (2.9.30) ... 540s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116669 files and directories currently installed.) 540s Preparing to unpack .../0-apt-utils_2.9.30_arm64.deb ... 540s Unpacking apt-utils (2.9.30) over (2.9.29) ... 540s Preparing to unpack .../1-iproute2_6.13.0-1ubuntu1_arm64.deb ... 540s Unpacking iproute2 (6.13.0-1ubuntu1) over (6.10.0-2ubuntu1) ... 541s Preparing to unpack .../2-libp11-kit0_0.25.5-2ubuntu3_arm64.deb ... 541s Unpacking libp11-kit0:arm64 (0.25.5-2ubuntu3) over (0.25.5-2ubuntu2) ... 541s Preparing to unpack .../3-rsyslog_8.2412.0-2ubuntu1_arm64.deb ... 541s Unpacking rsyslog (8.2412.0-2ubuntu1) over (8.2412.0-1ubuntu1) ... 541s Preparing to unpack .../4-lsof_4.99.4+dfsg-1_arm64.deb ... 541s Unpacking lsof (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 541s Preparing to unpack .../5-liblsof0_4.99.4+dfsg-1_arm64.deb ... 541s Unpacking liblsof0 (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 541s Setting up apt-utils (2.9.30) ... 541s Setting up liblsof0 (4.99.4+dfsg-1) ... 541s Setting up iproute2 (6.13.0-1ubuntu1) ... 542s Setting up rsyslog (8.2412.0-2ubuntu1) ... 542s info: The user `syslog' is already a member of `adm'. 544s Setting up libp11-kit0:arm64 (0.25.5-2ubuntu3) ... 544s Setting up lsof (4.99.4+dfsg-1) ... 544s Processing triggers for man-db (2.13.0-1) ... 546s Processing triggers for libc-bin (2.40-4ubuntu1) ... 546s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 546s + /usr/lib/apt/apt-helper analyze-pattern ?true 547s + uname -r 547s + sed s/\./\\./g 547s + running_kernel_pattern=^linux-.*6\.12\.0-15-generic.* 547s + + tail -n+2 547s apt list ?obsolete 547s + grep -v ^linux-.*6\.12\.0-15-generic.* 547s + cut -d/ -f1 548s + true 548s + obsolete_pkgs= 548s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove 548s Reading package lists... 549s Building dependency tree... 549s Reading state information... 550s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 550s + grep -q trusty /etc/lsb-release 550s + [ ! -d /usr/share/doc/unattended-upgrades ] 550s + [ ! -d /usr/share/doc/lxd ] 550s + [ ! -d /usr/share/doc/lxd-client ] 550s + [ ! -d /usr/share/doc/snapd ] 550s + type iptables 550s + cat 550s + chmod 755 /etc/rc.local 550s + . /etc/rc.local 550s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 550s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 550s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 550s + uname -m 550s + [ aarch64 = ppc64le ] 550s + [ -d /run/systemd/system ] 550s + systemd-detect-virt --quiet --vm 550s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 550s + cat 550s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 550s + echo COMPRESS=lz4 550s autopkgtest [12:12:10]: upgrading testbed (apt dist-upgrade and autopurge) 550s Reading package lists... 550s Building dependency tree... 550s Reading state information... 551s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 551s Starting 2 pkgProblemResolver with broken count: 0 551s Done 552s Entering ResolveByKeep 553s 554s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 554s Reading package lists... 555s Building dependency tree... 555s Reading state information... 555s Starting pkgProblemResolver with broken count: 0 556s Starting 2 pkgProblemResolver with broken count: 0 556s Done 557s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 557s autopkgtest [12:12:17]: rebooting testbed after setup commands that affected boot 580s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 589s Reading package lists... 589s Building dependency tree... 589s Reading state information... 590s Starting pkgProblemResolver with broken count: 0 590s Starting 2 pkgProblemResolver with broken count: 0 590s Done 591s The following NEW packages will be installed: 591s libblas3 libgfortran5 liblapack3 liblbfgsb0 python3-all python3-decorator 591s python3-mpmath python3-nibabel python3-nipy python3-nipy-lib python3-numpy 591s python3-packaging python3-scipy python3-sympy python3-transforms3d 591s python3.12 python3.12-minimal 591s 0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. 591s Need to get 39.9 MB of archives. 591s After this operation, 199 MB of additional disk space will be used. 591s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-minimal arm64 3.12.9-1 [2236 kB] 592s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12 arm64 3.12.9-1 [671 kB] 592s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 592s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250213-1ubuntu1 [443 kB] 592s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 592s Get:6 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 592s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all arm64 3.13.1-1~exp2 [894 B] 592s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 592s Get:9 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-mpmath all 1.3.0-1 [425 kB] 592s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-13 [4148 kB] 593s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.2-1 [51.5 kB] 593s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.14.1-4ubuntu1 [19.5 MB] 594s Get:13 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-nibabel all 5.3.2-2 [2701 kB] 594s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sympy all 1.13.3-1 [4228 kB] 594s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-transforms3d all 0.4.2+ds-1 [1359 kB] 594s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-nipy-lib arm64 0.6.1-1build2 [895 kB] 594s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-nipy all 0.6.1-1build2 [727 kB] 595s Fetched 39.9 MB in 4s (11.3 MB/s) 595s Selecting previously unselected package python3.12-minimal. 595s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 116670 files and directories currently installed.) 595s Preparing to unpack .../00-python3.12-minimal_3.12.9-1_arm64.deb ... 595s Unpacking python3.12-minimal (3.12.9-1) ... 595s Selecting previously unselected package python3.12. 595s Preparing to unpack .../01-python3.12_3.12.9-1_arm64.deb ... 595s Unpacking python3.12 (3.12.9-1) ... 595s Selecting previously unselected package libblas3:arm64. 595s Preparing to unpack .../02-libblas3_3.12.1-2_arm64.deb ... 595s Unpacking libblas3:arm64 (3.12.1-2) ... 595s Selecting previously unselected package libgfortran5:arm64. 595s Preparing to unpack .../03-libgfortran5_15-20250213-1ubuntu1_arm64.deb ... 595s Unpacking libgfortran5:arm64 (15-20250213-1ubuntu1) ... 595s Selecting previously unselected package liblapack3:arm64. 595s Preparing to unpack .../04-liblapack3_3.12.1-2_arm64.deb ... 595s Unpacking liblapack3:arm64 (3.12.1-2) ... 595s Selecting previously unselected package liblbfgsb0:arm64. 595s Preparing to unpack .../05-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ... 595s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 595s Selecting previously unselected package python3-all. 596s Preparing to unpack .../06-python3-all_3.13.1-1~exp2_arm64.deb ... 596s Unpacking python3-all (3.13.1-1~exp2) ... 596s Selecting previously unselected package python3-decorator. 596s Preparing to unpack .../07-python3-decorator_5.1.1-5_all.deb ... 596s Unpacking python3-decorator (5.1.1-5) ... 596s Selecting previously unselected package python3-mpmath. 596s Preparing to unpack .../08-python3-mpmath_1.3.0-1_all.deb ... 596s Unpacking python3-mpmath (1.3.0-1) ... 596s Selecting previously unselected package python3-numpy. 596s Preparing to unpack .../09-python3-numpy_1%3a1.26.4+ds-13_arm64.deb ... 596s Unpacking python3-numpy (1:1.26.4+ds-13) ... 596s Selecting previously unselected package python3-packaging. 596s Preparing to unpack .../10-python3-packaging_24.2-1_all.deb ... 596s Unpacking python3-packaging (24.2-1) ... 596s Selecting previously unselected package python3-scipy. 596s Preparing to unpack .../11-python3-scipy_1.14.1-4ubuntu1_arm64.deb ... 596s Unpacking python3-scipy (1.14.1-4ubuntu1) ... 597s Selecting previously unselected package python3-nibabel. 597s Preparing to unpack .../12-python3-nibabel_5.3.2-2_all.deb ... 597s Unpacking python3-nibabel (5.3.2-2) ... 597s Selecting previously unselected package python3-sympy. 597s Preparing to unpack .../13-python3-sympy_1.13.3-1_all.deb ... 597s Unpacking python3-sympy (1.13.3-1) ... 597s Selecting previously unselected package python3-transforms3d. 597s Preparing to unpack .../14-python3-transforms3d_0.4.2+ds-1_all.deb ... 597s Unpacking python3-transforms3d (0.4.2+ds-1) ... 597s Selecting previously unselected package python3-nipy-lib:arm64. 597s Preparing to unpack .../15-python3-nipy-lib_0.6.1-1build2_arm64.deb ... 597s Unpacking python3-nipy-lib:arm64 (0.6.1-1build2) ... 597s Selecting previously unselected package python3-nipy. 597s Preparing to unpack .../16-python3-nipy_0.6.1-1build2_all.deb ... 597s Unpacking python3-nipy (0.6.1-1build2) ... 597s Setting up python3.12-minimal (3.12.9-1) ... 598s Setting up python3.12 (3.12.9-1) ... 600s Setting up python3-all (3.13.1-1~exp2) ... 600s Setting up python3-decorator (5.1.1-5) ... 600s Setting up libblas3:arm64 (3.12.1-2) ... 600s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 600s Setting up python3-packaging (24.2-1) ... 600s Setting up libgfortran5:arm64 (15-20250213-1ubuntu1) ... 600s Setting up python3-mpmath (1.3.0-1) ... 601s Setting up python3-sympy (1.13.3-1) ... 616s Setting up liblapack3:arm64 (3.12.1-2) ... 616s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 616s Setting up python3-numpy (1:1.26.4+ds-13) ... 620s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 620s Setting up python3-transforms3d (0.4.2+ds-1) ... 620s Setting up python3-scipy (1.14.1-4ubuntu1) ... 628s Setting up python3-nibabel (5.3.2-2) ... 629s Setting up python3-nipy-lib:arm64 (0.6.1-1build2) ... 629s Setting up python3-nipy (0.6.1-1build2) ... 630s Processing triggers for systemd (257.2-3ubuntu1) ... 630s Processing triggers for man-db (2.13.0-1) ... 631s Processing triggers for libc-bin (2.40-4ubuntu1) ... 635s autopkgtest [12:13:35]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import nipy; print(nipy)" ; done 635s autopkgtest [12:13:35]: test autodep8-python3: [----------------------- 635s Testing with python3.12: 636s 636s Testing with python3.13: 636s 636s autopkgtest [12:13:36]: test autodep8-python3: -----------------------] 637s autodep8-python3 PASS (superficial) 637s autopkgtest [12:13:37]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 637s autopkgtest [12:13:37]: @@@@@@@@@@@@@@@@@@@@ summary 637s command1 PASS 637s autodep8-python3 PASS (superficial) 654s nova [W] Using flock in prodstack6-arm64 654s Creating nova instance adt-plucky-arm64-nipy-20250219-120300-juju-7f2275-prod-proposed-migration-environment-15-6c68e3fc-aca5-4723-8996-3cde6334bad8 from image adt/ubuntu-plucky-arm64-server-20250219.img (UUID 02c92adb-9d9d-4b0e-b071-488d8ee6210f)... 654s nova [W] Timed out waiting for 993e955b-499f-416e-8b02-3257711f0b10 to get deleted. 654s nova [W] Using flock in prodstack6-arm64 654s Creating nova instance adt-plucky-arm64-nipy-20250219-120300-juju-7f2275-prod-proposed-migration-environment-15-6c68e3fc-aca5-4723-8996-3cde6334bad8 from image adt/ubuntu-plucky-arm64-server-20250219.img (UUID 02c92adb-9d9d-4b0e-b071-488d8ee6210f)... 654s nova [W] Timed out waiting for c2b0a691-f553-4744-b073-a8a8e182fcce to get deleted.