0s autopkgtest [08:33:41]: starting date and time: 2025-03-15 08:33:41+0000 0s autopkgtest [08:33:41]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [08:33:41]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work._9bv_uc8/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:texlive-base,src:gnustep-make,src:wp2latex --apt-upgrade nanook --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=texlive-base/2024.20250309-1 gnustep-make/2.9.3-4 wp2latex/4.14~ds-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-2.secgroup --name adt-plucky-arm64-nanook-20250315-083341-juju-7f2275-prod-proposed-migration-environment-2-77529209-5866-4106-b936-8abba37174eb --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 164s autopkgtest [08:36:25]: testbed dpkg architecture: arm64 164s autopkgtest [08:36:25]: testbed apt version: 2.9.33 165s autopkgtest [08:36:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup 165s autopkgtest [08:36:26]: testbed release detected to be: None 166s autopkgtest [08:36:27]: updating testbed package index (apt update) 166s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 167s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 167s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 167s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 167s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [51.3 kB] 167s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [437 kB] 167s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.9 kB] 167s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [83.0 kB] 167s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 c-n-f Metadata [1576 B] 167s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 c-n-f Metadata [116 B] 167s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [380 kB] 167s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 c-n-f Metadata [11.9 kB] 167s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [12.1 kB] 167s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 c-n-f Metadata [216 B] 168s Fetched 1120 kB in 1s (1054 kB/s) 169s Reading package lists... 170s Reading package lists... 170s Building dependency tree... 170s Reading state information... 171s Calculating upgrade... 171s Calculating upgrade... 172s The following packages will be upgraded: 172s python3-jinja2 strace 172s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 172s Need to get 608 kB of archives. 172s After this operation, 11.3 kB of additional disk space will be used. 172s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 strace arm64 6.13+ds-1ubuntu1 [499 kB] 173s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 174s Fetched 608 kB in 1s (466 kB/s) 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 175s Preparing to unpack .../strace_6.13+ds-1ubuntu1_arm64.deb ... 175s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 175s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 175s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 175s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 176s Setting up strace (6.13+ds-1ubuntu1) ... 176s Processing triggers for man-db (2.13.0-1) ... 177s Reading package lists... 177s Building dependency tree... 177s Reading state information... 178s Solving dependencies... 178s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 178s autopkgtest [08:36:39]: upgrading testbed (apt dist-upgrade and autopurge) 179s Reading package lists... 179s Building dependency tree... 179s Reading state information... 180s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 180s Starting 2 pkgProblemResolver with broken count: 0 180s Done 181s Entering ResolveByKeep 182s 182s Calculating upgrade... 182s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 183s Reading package lists... 183s Building dependency tree... 183s Reading state information... 184s Starting pkgProblemResolver with broken count: 0 185s Starting 2 pkgProblemResolver with broken count: 0 185s Done 186s Solving dependencies... 187s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 190s autopkgtest [08:36:51]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 15:45:31 UTC 2025 190s autopkgtest [08:36:51]: @@@@@@@@@@@@@@@@@@@@ apt-source nanook 194s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (dsc) [2220 B] 194s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (tar) [95.2 kB] 194s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (diff) [1818 kB] 194s gpgv: Signature made Wed Dec 18 14:21:48 2024 UTC 194s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 194s gpgv: issuer "emollier@debian.org" 194s gpgv: Can't check signature: No public key 194s dpkg-source: warning: cannot verify inline signature for ./nanook_1.33+dfsg-6.dsc: no acceptable signature found 195s autopkgtest [08:36:56]: testing package nanook version 1.33+dfsg-6 195s autopkgtest [08:36:56]: build not needed 196s autopkgtest [08:36:57]: test run-unit-test: preparing testbed 196s Reading package lists... 197s Building dependency tree... 197s Reading state information... 197s Starting pkgProblemResolver with broken count: 0 198s Starting 2 pkgProblemResolver with broken count: 0 198s Done 199s The following NEW packages will be installed: 199s ca-certificates-java default-jre-headless fontconfig fontconfig-config 199s fonts-dejavu-core fonts-dejavu-mono fonts-lmodern hdf5-tools java-common 199s last-align libaec0 libapache-pom-java libblas3 libcairo2 libcommons-io-java 199s libcommons-parent-java libdatrie1 libdeflate0 libfontconfig1 libgfortran5 199s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 libhdf5-hl-310 libice6 199s libjbig0 libjpeg-turbo8 libjpeg8 libkpathsea6 liblapack3 liblcms2-2 liblerc4 199s libmpfi0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 199s libpaper2 libpcsclite1 libpixman-1-0 libpotrace0 libptexenc1 libsharpyuv0 199s libsm6 libsynctex2 libsz2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 199s libthai0 libtiff6 libtk8.6 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 199s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzzip-0-13t64 199s littler nanook nanook-examples openjdk-21-jre-headless r-base-core 199s r-cran-cli r-cran-colorspace r-cran-fansi r-cran-farver r-cran-ggplot2 199s r-cran-glue r-cran-gridextra r-cran-gtable r-cran-isoband r-cran-labeling 199s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 199s r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar 199s r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-r6 r-cran-rcolorbrewer 199s r-cran-rcpp r-cran-reshape r-cran-rlang r-cran-scales r-cran-tibble 199s r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr t1utils tex-common 199s texlive-base texlive-binaries texlive-latex-base unzip x11-common xdg-utils 199s zip 199s 0 upgraded, 114 newly installed, 0 to remove and 0 not upgraded. 199s Need to get 161 MB of archives. 199s After this operation, 472 MB of additional disk space will be used. 199s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 ca-certificates-java all 20240118 [11.6 kB] 199s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 java-common all 0.76 [6852 B] 199s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB] 199s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 200s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 200s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcsclite1 arm64 2.3.1-1 [25.0 kB] 200s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre-headless arm64 21.0.6+7-1 [45.7 MB] 246s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre-headless arm64 2:1.21-76 [3176 B] 246s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 246s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 247s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-2ubuntu1 [37.5 kB] 247s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-2ubuntu1 [144 kB] 247s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-2ubuntu1 [191 kB] 247s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 253s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 253s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 253s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-310 arm64 1.14.5+repack-3 [1331 kB] 254s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [59.8 kB] 254s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 hdf5-tools arm64 1.14.5+repack-3 [366 kB] 254s Get:20 http://ftpmaster.internal/ubuntu plucky/universe arm64 last-align arm64 1542-1 [780 kB] 255s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapache-pom-java all 33-2 [5874 B] 255s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 255s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 256s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 256s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 256s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 256s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 256s Get:28 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-parent-java all 56-1 [10.7 kB] 256s Get:29 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-io-java all 2.18.0-1 [477 kB] 257s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 257s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB] 257s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 15-20250222-0ubuntu1 [444 kB] 257s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 15-20250222-0ubuntu1 [146 kB] 257s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 257s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 258s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 258s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 258s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libkpathsea6 arm64 2024.20240313.70630+ds-5build2 [64.3 kB] 258s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 261s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 261s Get:41 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmpfi0 arm64 1.5.4+ds-4 [35.3 kB] 261s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 261s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 261s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.56.1-1 [238 kB] 262s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.56.1-1 [49.6 kB] 262s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.56.1-1 [27.6 kB] 262s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 262s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 262s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpotrace0 arm64 1.16-2build1 [16.0 kB] 262s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libptexenc1 arm64 2024.20240313.70630+ds-5build2 [41.7 kB] 262s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 262s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB] 262s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libsynctex2 arm64 2024.20240313.70630+ds-5build2 [60.3 kB] 262s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 263s Get:55 http://ftpmaster.internal/ubuntu plucky/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 264s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libtexlua53-5 arm64 2024.20240313.70630+ds-5build2 [122 kB] 264s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 264s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 264s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 264s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 264s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 264s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 265s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 265s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libxmu6 arm64 2:1.1.3-3build2 [47.5 kB] 265s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libxpm4 arm64 1:3.5.17-1build2 [35.1 kB] 265s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libxaw7 arm64 2:1.0.16-1 [184 kB] 266s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 266s Get:68 http://ftpmaster.internal/ubuntu plucky/universe arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.1 [30.8 kB] 266s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 266s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 266s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 266s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-base-core arm64 4.4.3-1 [28.4 MB] 295s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB] 295s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 littler all 0.3.20-2 [2554 B] 296s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 297s Get:76 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 297s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rlang arm64 1.1.5-1 [1707 kB] 299s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 299s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 299s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 301s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mass arm64 7.3-64-1 [1110 kB] 302s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 304s Get:83 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-nlme arm64 3.1.167-1 [2311 kB] 306s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB] 311s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 315s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 316s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 316s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 318s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 318s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 318s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 318s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 320s Get:93 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 320s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 321s Get:95 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 321s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 322s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 324s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 324s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 324s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 325s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 325s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 330s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 331s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 331s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 333s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-plyr arm64 1.8.9-1 [831 kB] 334s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 r-cran-reshape all 0.8.9-1 [168 kB] 334s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 tex-common all 6.19 [29.8 kB] 334s Get:109 http://ftpmaster.internal/ubuntu plucky/main arm64 t1utils arm64 1.41-4build3 [61.0 kB] 334s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 texlive-binaries arm64 2024.20240313.70630+ds-5build2 [8328 kB] 344s Get:111 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 texlive-base all 2024.20250309-1 [22.7 MB] 370s Get:112 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 texlive-latex-base all 2024.20250309-1 [1276 kB] 371s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 nanook all 1.33+dfsg-6 [195 kB] 372s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 nanook-examples all 1.33+dfsg-6 [1814 kB] 375s Preconfiguring packages ... 375s Fetched 161 MB in 2min 55s (921 kB/s) 375s Selecting previously unselected package ca-certificates-java. 375s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117701 files and directories currently installed.) 375s Preparing to unpack .../000-ca-certificates-java_20240118_all.deb ... 375s Unpacking ca-certificates-java (20240118) ... 375s Selecting previously unselected package java-common. 375s Preparing to unpack .../001-java-common_0.76_all.deb ... 375s Unpacking java-common (0.76) ... 375s Selecting previously unselected package liblcms2-2:arm64. 375s Preparing to unpack .../002-liblcms2-2_2.16-2_arm64.deb ... 375s Unpacking liblcms2-2:arm64 (2.16-2) ... 375s Selecting previously unselected package libjpeg-turbo8:arm64. 375s Preparing to unpack .../003-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 375s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 375s Selecting previously unselected package libjpeg8:arm64. 375s Preparing to unpack .../004-libjpeg8_8c-2ubuntu11_arm64.deb ... 375s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 375s Selecting previously unselected package libpcsclite1:arm64. 375s Preparing to unpack .../005-libpcsclite1_2.3.1-1_arm64.deb ... 375s Unpacking libpcsclite1:arm64 (2.3.1-1) ... 375s Selecting previously unselected package openjdk-21-jre-headless:arm64. 375s Preparing to unpack .../006-openjdk-21-jre-headless_21.0.6+7-1_arm64.deb ... 375s Unpacking openjdk-21-jre-headless:arm64 (21.0.6+7-1) ... 377s Selecting previously unselected package default-jre-headless. 377s Preparing to unpack .../007-default-jre-headless_2%3a1.21-76_arm64.deb ... 377s Unpacking default-jre-headless (2:1.21-76) ... 377s Selecting previously unselected package fonts-dejavu-mono. 377s Preparing to unpack .../008-fonts-dejavu-mono_2.37-8_all.deb ... 377s Unpacking fonts-dejavu-mono (2.37-8) ... 377s Selecting previously unselected package fonts-dejavu-core. 377s Preparing to unpack .../009-fonts-dejavu-core_2.37-8_all.deb ... 377s Unpacking fonts-dejavu-core (2.37-8) ... 377s Selecting previously unselected package fontconfig-config. 377s Preparing to unpack .../010-fontconfig-config_2.15.0-2ubuntu1_arm64.deb ... 378s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 378s Selecting previously unselected package libfontconfig1:arm64. 378s Preparing to unpack .../011-libfontconfig1_2.15.0-2ubuntu1_arm64.deb ... 378s Unpacking libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 378s Selecting previously unselected package fontconfig. 378s Preparing to unpack .../012-fontconfig_2.15.0-2ubuntu1_arm64.deb ... 378s Unpacking fontconfig (2.15.0-2ubuntu1) ... 378s Selecting previously unselected package fonts-lmodern. 378s Preparing to unpack .../013-fonts-lmodern_2.005-1_all.deb ... 378s Unpacking fonts-lmodern (2.005-1) ... 378s Selecting previously unselected package libaec0:arm64. 378s Preparing to unpack .../014-libaec0_1.1.3-1_arm64.deb ... 378s Unpacking libaec0:arm64 (1.1.3-1) ... 378s Selecting previously unselected package libsz2:arm64. 378s Preparing to unpack .../015-libsz2_1.1.3-1_arm64.deb ... 378s Unpacking libsz2:arm64 (1.1.3-1) ... 378s Selecting previously unselected package libhdf5-310:arm64. 378s Preparing to unpack .../016-libhdf5-310_1.14.5+repack-3_arm64.deb ... 378s Unpacking libhdf5-310:arm64 (1.14.5+repack-3) ... 378s Selecting previously unselected package libhdf5-hl-310:arm64. 378s Preparing to unpack .../017-libhdf5-hl-310_1.14.5+repack-3_arm64.deb ... 378s Unpacking libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 378s Selecting previously unselected package hdf5-tools. 378s Preparing to unpack .../018-hdf5-tools_1.14.5+repack-3_arm64.deb ... 378s Unpacking hdf5-tools (1.14.5+repack-3) ... 379s Selecting previously unselected package last-align. 379s Preparing to unpack .../019-last-align_1542-1_arm64.deb ... 379s Unpacking last-align (1542-1) ... 379s Selecting previously unselected package libapache-pom-java. 379s Preparing to unpack .../020-libapache-pom-java_33-2_all.deb ... 379s Unpacking libapache-pom-java (33-2) ... 379s Selecting previously unselected package libblas3:arm64. 379s Preparing to unpack .../021-libblas3_3.12.1-2_arm64.deb ... 379s Unpacking libblas3:arm64 (3.12.1-2) ... 379s Selecting previously unselected package libpixman-1-0:arm64. 379s Preparing to unpack .../022-libpixman-1-0_0.44.0-3_arm64.deb ... 379s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 379s Selecting previously unselected package libxcb-render0:arm64. 379s Preparing to unpack .../023-libxcb-render0_1.17.0-2_arm64.deb ... 379s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 379s Selecting previously unselected package libxcb-shm0:arm64. 379s Preparing to unpack .../024-libxcb-shm0_1.17.0-2_arm64.deb ... 379s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 379s Selecting previously unselected package libxrender1:arm64. 379s Preparing to unpack .../025-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 379s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 379s Selecting previously unselected package libcairo2:arm64. 379s Preparing to unpack .../026-libcairo2_1.18.2-2_arm64.deb ... 379s Unpacking libcairo2:arm64 (1.18.2-2) ... 379s Selecting previously unselected package libcommons-parent-java. 379s Preparing to unpack .../027-libcommons-parent-java_56-1_all.deb ... 379s Unpacking libcommons-parent-java (56-1) ... 379s Selecting previously unselected package libcommons-io-java. 379s Preparing to unpack .../028-libcommons-io-java_2.18.0-1_all.deb ... 379s Unpacking libcommons-io-java (2.18.0-1) ... 379s Selecting previously unselected package libdatrie1:arm64. 379s Preparing to unpack .../029-libdatrie1_0.2.13-3build1_arm64.deb ... 379s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 379s Selecting previously unselected package libdeflate0:arm64. 380s Preparing to unpack .../030-libdeflate0_1.23-1_arm64.deb ... 380s Unpacking libdeflate0:arm64 (1.23-1) ... 380s Selecting previously unselected package libgfortran5:arm64. 380s Preparing to unpack .../031-libgfortran5_15-20250222-0ubuntu1_arm64.deb ... 380s Unpacking libgfortran5:arm64 (15-20250222-0ubuntu1) ... 380s Selecting previously unselected package libgomp1:arm64. 380s Preparing to unpack .../032-libgomp1_15-20250222-0ubuntu1_arm64.deb ... 380s Unpacking libgomp1:arm64 (15-20250222-0ubuntu1) ... 380s Selecting previously unselected package libgraphite2-3:arm64. 380s Preparing to unpack .../033-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 380s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 380s Selecting previously unselected package libharfbuzz0b:arm64. 380s Preparing to unpack .../034-libharfbuzz0b_10.2.0-1_arm64.deb ... 380s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 380s Selecting previously unselected package x11-common. 380s Preparing to unpack .../035-x11-common_1%3a7.7+23ubuntu3_all.deb ... 380s Unpacking x11-common (1:7.7+23ubuntu3) ... 380s Selecting previously unselected package libice6:arm64. 380s Preparing to unpack .../036-libice6_2%3a1.1.1-1_arm64.deb ... 380s Unpacking libice6:arm64 (2:1.1.1-1) ... 380s Selecting previously unselected package libkpathsea6:arm64. 380s Preparing to unpack .../037-libkpathsea6_2024.20240313.70630+ds-5build2_arm64.deb ... 380s Unpacking libkpathsea6:arm64 (2024.20240313.70630+ds-5build2) ... 380s Selecting previously unselected package liblapack3:arm64. 380s Preparing to unpack .../038-liblapack3_3.12.1-2_arm64.deb ... 380s Unpacking liblapack3:arm64 (3.12.1-2) ... 380s Selecting previously unselected package liblerc4:arm64. 381s Preparing to unpack .../039-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 381s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 381s Selecting previously unselected package libmpfi0:arm64. 381s Preparing to unpack .../040-libmpfi0_1.5.4+ds-4_arm64.deb ... 381s Unpacking libmpfi0:arm64 (1.5.4+ds-4) ... 381s Selecting previously unselected package libthai-data. 381s Preparing to unpack .../041-libthai-data_0.1.29-2build1_all.deb ... 381s Unpacking libthai-data (0.1.29-2build1) ... 381s Selecting previously unselected package libthai0:arm64. 381s Preparing to unpack .../042-libthai0_0.1.29-2build1_arm64.deb ... 381s Unpacking libthai0:arm64 (0.1.29-2build1) ... 381s Selecting previously unselected package libpango-1.0-0:arm64. 381s Preparing to unpack .../043-libpango-1.0-0_1.56.1-1_arm64.deb ... 381s Unpacking libpango-1.0-0:arm64 (1.56.1-1) ... 381s Selecting previously unselected package libpangoft2-1.0-0:arm64. 381s Preparing to unpack .../044-libpangoft2-1.0-0_1.56.1-1_arm64.deb ... 381s Unpacking libpangoft2-1.0-0:arm64 (1.56.1-1) ... 381s Selecting previously unselected package libpangocairo-1.0-0:arm64. 381s Preparing to unpack .../045-libpangocairo-1.0-0_1.56.1-1_arm64.deb ... 381s Unpacking libpangocairo-1.0-0:arm64 (1.56.1-1) ... 381s Selecting previously unselected package libpaper2:arm64. 381s Preparing to unpack .../046-libpaper2_2.2.5-0.3_arm64.deb ... 381s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 381s Selecting previously unselected package libpaper-utils. 381s Preparing to unpack .../047-libpaper-utils_2.2.5-0.3_arm64.deb ... 381s Unpacking libpaper-utils (2.2.5-0.3) ... 381s Selecting previously unselected package libpotrace0:arm64. 381s Preparing to unpack .../048-libpotrace0_1.16-2build1_arm64.deb ... 381s Unpacking libpotrace0:arm64 (1.16-2build1) ... 381s Selecting previously unselected package libptexenc1:arm64. 381s Preparing to unpack .../049-libptexenc1_2024.20240313.70630+ds-5build2_arm64.deb ... 381s Unpacking libptexenc1:arm64 (2024.20240313.70630+ds-5build2) ... 381s Selecting previously unselected package libsharpyuv0:arm64. 381s Preparing to unpack .../050-libsharpyuv0_1.5.0-0.1_arm64.deb ... 381s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 381s Selecting previously unselected package libsm6:arm64. 381s Preparing to unpack .../051-libsm6_2%3a1.2.4-1_arm64.deb ... 381s Unpacking libsm6:arm64 (2:1.2.4-1) ... 381s Selecting previously unselected package libsynctex2:arm64. 381s Preparing to unpack .../052-libsynctex2_2024.20240313.70630+ds-5build2_arm64.deb ... 381s Unpacking libsynctex2:arm64 (2024.20240313.70630+ds-5build2) ... 382s Selecting previously unselected package libtcl8.6:arm64. 382s Preparing to unpack .../053-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 382s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 382s Selecting previously unselected package libteckit0:arm64. 382s Preparing to unpack .../054-libteckit0_2.5.12+ds1-1_arm64.deb ... 382s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 382s Selecting previously unselected package libtexlua53-5:arm64. 382s Preparing to unpack .../055-libtexlua53-5_2024.20240313.70630+ds-5build2_arm64.deb ... 382s Unpacking libtexlua53-5:arm64 (2024.20240313.70630+ds-5build2) ... 382s Selecting previously unselected package libjbig0:arm64. 382s Preparing to unpack .../056-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 382s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 382s Selecting previously unselected package libwebp7:arm64. 382s Preparing to unpack .../057-libwebp7_1.5.0-0.1_arm64.deb ... 382s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 382s Selecting previously unselected package libtiff6:arm64. 382s Preparing to unpack .../058-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 382s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 382s Selecting previously unselected package libxft2:arm64. 382s Preparing to unpack .../059-libxft2_2.3.6-1build1_arm64.deb ... 382s Unpacking libxft2:arm64 (2.3.6-1build1) ... 382s Selecting previously unselected package libxss1:arm64. 382s Preparing to unpack .../060-libxss1_1%3a1.2.3-1build3_arm64.deb ... 382s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 382s Selecting previously unselected package libtk8.6:arm64. 382s Preparing to unpack .../061-libtk8.6_8.6.16-1_arm64.deb ... 382s Unpacking libtk8.6:arm64 (8.6.16-1) ... 382s Selecting previously unselected package libxt6t64:arm64. 382s Preparing to unpack .../062-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 382s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 382s Selecting previously unselected package libxmu6:arm64. 382s Preparing to unpack .../063-libxmu6_2%3a1.1.3-3build2_arm64.deb ... 382s Unpacking libxmu6:arm64 (2:1.1.3-3build2) ... 382s Selecting previously unselected package libxpm4:arm64. 382s Preparing to unpack .../064-libxpm4_1%3a3.5.17-1build2_arm64.deb ... 382s Unpacking libxpm4:arm64 (1:3.5.17-1build2) ... 383s Selecting previously unselected package libxaw7:arm64. 383s Preparing to unpack .../065-libxaw7_2%3a1.0.16-1_arm64.deb ... 383s Unpacking libxaw7:arm64 (2:1.0.16-1) ... 383s Selecting previously unselected package libxi6:arm64. 383s Preparing to unpack .../066-libxi6_2%3a1.8.2-1_arm64.deb ... 383s Unpacking libxi6:arm64 (2:1.8.2-1) ... 383s Selecting previously unselected package libzzip-0-13t64:arm64. 383s Preparing to unpack .../067-libzzip-0-13t64_0.13.78+dfsg.1-0.1_arm64.deb ... 383s Unpacking libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.1) ... 383s Selecting previously unselected package zip. 383s Preparing to unpack .../068-zip_3.0-14ubuntu2_arm64.deb ... 383s Unpacking zip (3.0-14ubuntu2) ... 383s Selecting previously unselected package unzip. 383s Preparing to unpack .../069-unzip_6.0-28ubuntu6_arm64.deb ... 383s Unpacking unzip (6.0-28ubuntu6) ... 383s Selecting previously unselected package xdg-utils. 383s Preparing to unpack .../070-xdg-utils_1.2.1-2ubuntu1_all.deb ... 383s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 383s Selecting previously unselected package r-base-core. 383s Preparing to unpack .../071-r-base-core_4.4.3-1_arm64.deb ... 383s Unpacking r-base-core (4.4.3-1) ... 384s Selecting previously unselected package r-cran-littler. 384s Preparing to unpack .../072-r-cran-littler_0.3.20-2_arm64.deb ... 384s Unpacking r-cran-littler (0.3.20-2) ... 384s Selecting previously unselected package littler. 384s Preparing to unpack .../073-littler_0.3.20-2_all.deb ... 384s Unpacking littler (0.3.20-2) ... 384s Selecting previously unselected package r-cran-cli. 384s Preparing to unpack .../074-r-cran-cli_3.6.4-1_arm64.deb ... 384s Unpacking r-cran-cli (3.6.4-1) ... 384s Selecting previously unselected package r-cran-glue. 384s Preparing to unpack .../075-r-cran-glue_1.8.0-1_arm64.deb ... 384s Unpacking r-cran-glue (1.8.0-1) ... 384s Selecting previously unselected package r-cran-rlang. 384s Preparing to unpack .../076-r-cran-rlang_1.1.5-1_arm64.deb ... 384s Unpacking r-cran-rlang (1.1.5-1) ... 384s Selecting previously unselected package r-cran-lifecycle. 384s Preparing to unpack .../077-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 384s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 384s Selecting previously unselected package r-cran-gtable. 384s Preparing to unpack .../078-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 384s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 384s Selecting previously unselected package r-cran-isoband. 384s Preparing to unpack .../079-r-cran-isoband_0.2.7-1_arm64.deb ... 384s Unpacking r-cran-isoband (0.2.7-1) ... 384s Selecting previously unselected package r-cran-mass. 384s Preparing to unpack .../080-r-cran-mass_7.3-64-1_arm64.deb ... 384s Unpacking r-cran-mass (7.3-64-1) ... 384s Selecting previously unselected package r-cran-lattice. 384s Preparing to unpack .../081-r-cran-lattice_0.22-6-1_arm64.deb ... 384s Unpacking r-cran-lattice (0.22-6-1) ... 385s Selecting previously unselected package r-cran-nlme. 385s Preparing to unpack .../082-r-cran-nlme_3.1.167-1_arm64.deb ... 385s Unpacking r-cran-nlme (3.1.167-1) ... 385s Selecting previously unselected package r-cran-matrix. 385s Preparing to unpack .../083-r-cran-matrix_1.7-3-1_arm64.deb ... 385s Unpacking r-cran-matrix (1.7-3-1) ... 385s Selecting previously unselected package r-cran-mgcv. 385s Preparing to unpack .../084-r-cran-mgcv_1.9-1-1_arm64.deb ... 385s Unpacking r-cran-mgcv (1.9-1-1) ... 385s Selecting previously unselected package r-cran-farver. 385s Preparing to unpack .../085-r-cran-farver_2.1.2-1_arm64.deb ... 385s Unpacking r-cran-farver (2.1.2-1) ... 385s Selecting previously unselected package r-cran-labeling. 385s Preparing to unpack .../086-r-cran-labeling_0.4.3-1_all.deb ... 385s Unpacking r-cran-labeling (0.4.3-1) ... 385s Selecting previously unselected package r-cran-colorspace. 385s Preparing to unpack .../087-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 385s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 385s Selecting previously unselected package r-cran-munsell. 385s Preparing to unpack .../088-r-cran-munsell_0.5.1-1_all.deb ... 385s Unpacking r-cran-munsell (0.5.1-1) ... 385s Selecting previously unselected package r-cran-r6. 385s Preparing to unpack .../089-r-cran-r6_2.6.1-1_all.deb ... 385s Unpacking r-cran-r6 (2.6.1-1) ... 385s Selecting previously unselected package r-cran-rcolorbrewer. 385s Preparing to unpack .../090-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 385s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 385s Selecting previously unselected package r-cran-viridislite. 385s Preparing to unpack .../091-r-cran-viridislite_0.4.2-2_all.deb ... 385s Unpacking r-cran-viridislite (0.4.2-2) ... 385s Selecting previously unselected package r-cran-scales. 386s Preparing to unpack .../092-r-cran-scales_1.3.0-1_all.deb ... 386s Unpacking r-cran-scales (1.3.0-1) ... 386s Selecting previously unselected package r-cran-fansi. 386s Preparing to unpack .../093-r-cran-fansi_1.0.5-1_arm64.deb ... 386s Unpacking r-cran-fansi (1.0.5-1) ... 386s Selecting previously unselected package r-cran-magrittr. 386s Preparing to unpack .../094-r-cran-magrittr_2.0.3-1_arm64.deb ... 386s Unpacking r-cran-magrittr (2.0.3-1) ... 386s Selecting previously unselected package r-cran-utf8. 386s Preparing to unpack .../095-r-cran-utf8_1.2.4-1_arm64.deb ... 386s Unpacking r-cran-utf8 (1.2.4-1) ... 386s Selecting previously unselected package r-cran-vctrs. 386s Preparing to unpack .../096-r-cran-vctrs_0.6.5-1_arm64.deb ... 386s Unpacking r-cran-vctrs (0.6.5-1) ... 386s Selecting previously unselected package r-cran-pillar. 386s Preparing to unpack .../097-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 386s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 386s Selecting previously unselected package r-cran-pkgconfig. 386s Preparing to unpack .../098-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 386s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 386s Selecting previously unselected package r-cran-tibble. 386s Preparing to unpack .../099-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 386s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 386s Selecting previously unselected package r-cran-withr. 386s Preparing to unpack .../100-r-cran-withr_3.0.2+dfsg-1_all.deb ... 386s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 386s Selecting previously unselected package r-cran-ggplot2. 386s Preparing to unpack .../101-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 386s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 387s Selecting previously unselected package r-cran-gridextra. 387s Preparing to unpack .../102-r-cran-gridextra_2.3-3build1_all.deb ... 387s Unpacking r-cran-gridextra (2.3-3build1) ... 387s Selecting previously unselected package r-cran-pkgkitten. 387s Preparing to unpack .../103-r-cran-pkgkitten_0.2.4-1_all.deb ... 387s Unpacking r-cran-pkgkitten (0.2.4-1) ... 387s Selecting previously unselected package r-cran-rcpp. 387s Preparing to unpack .../104-r-cran-rcpp_1.0.14-1_arm64.deb ... 387s Unpacking r-cran-rcpp (1.0.14-1) ... 387s Selecting previously unselected package r-cran-plyr. 387s Preparing to unpack .../105-r-cran-plyr_1.8.9-1_arm64.deb ... 387s Unpacking r-cran-plyr (1.8.9-1) ... 387s Selecting previously unselected package r-cran-reshape. 387s Preparing to unpack .../106-r-cran-reshape_0.8.9-1_all.deb ... 387s Unpacking r-cran-reshape (0.8.9-1) ... 387s Selecting previously unselected package tex-common. 387s Preparing to unpack .../107-tex-common_6.19_all.deb ... 387s Unpacking tex-common (6.19) ... 387s Selecting previously unselected package t1utils. 387s Preparing to unpack .../108-t1utils_1.41-4build3_arm64.deb ... 387s Unpacking t1utils (1.41-4build3) ... 387s Selecting previously unselected package texlive-binaries. 387s Preparing to unpack .../109-texlive-binaries_2024.20240313.70630+ds-5build2_arm64.deb ... 387s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ... 388s Selecting previously unselected package texlive-base. 388s Preparing to unpack .../110-texlive-base_2024.20250309-1_all.deb ... 388s Unpacking texlive-base (2024.20250309-1) ... 389s Selecting previously unselected package texlive-latex-base. 389s Preparing to unpack .../111-texlive-latex-base_2024.20250309-1_all.deb ... 389s Unpacking texlive-latex-base (2024.20250309-1) ... 390s Selecting previously unselected package nanook. 390s Preparing to unpack .../112-nanook_1.33+dfsg-6_all.deb ... 390s Unpacking nanook (1.33+dfsg-6) ... 390s Selecting previously unselected package nanook-examples. 390s Preparing to unpack .../113-nanook-examples_1.33+dfsg-6_all.deb ... 390s Unpacking nanook-examples (1.33+dfsg-6) ... 390s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 390s Setting up liblcms2-2:arm64 (2.16-2) ... 390s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 390s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 390s Setting up nanook-examples (1.33+dfsg-6) ... 390s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 390s Setting up libxpm4:arm64 (1:3.5.17-1build2) ... 390s Setting up libxi6:arm64 (2:1.8.2-1) ... 390s Setting up java-common (0.76) ... 390s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 390s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 390s Setting up libxcb-render0:arm64 (1.17.0-2) ... 390s Setting up unzip (6.0-28ubuntu6) ... 390s Setting up x11-common (1:7.7+23ubuntu3) ... 390s Setting up libdeflate0:arm64 (1.23-1) ... 390s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 390s Setting up libgomp1:arm64 (15-20250222-0ubuntu1) ... 390s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 390s Setting up libaec0:arm64 (1.1.3-1) ... 390s Setting up last-align (1542-1) ... 390s Setting up tex-common (6.19) ... 391s update-language: texlive-base not installed and configured, doing nothing! 391s Setting up zip (3.0-14ubuntu2) ... 391s Setting up libblas3:arm64 (3.12.1-2) ... 391s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 391s Setting up libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.1) ... 391s Setting up libteckit0:arm64 (2.5.12+ds1-1) ... 391s Setting up libapache-pom-java (33-2) ... 391s Setting up t1utils (1.41-4build3) ... 391s Setting up libtexlua53-5:arm64 (2024.20240313.70630+ds-5build2) ... 391s Setting up fonts-dejavu-mono (2.37-8) ... 391s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ... 391s Setting up libmpfi0:arm64 (1.5.4+ds-4) ... 391s Setting up fonts-dejavu-core (2.37-8) ... 391s Setting up libpcsclite1:arm64 (2.3.1-1) ... 391s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 391s Setting up libkpathsea6:arm64 (2024.20240313.70630+ds-5build2) ... 391s Setting up libgfortran5:arm64 (15-20250222-0ubuntu1) ... 391s Setting up libwebp7:arm64 (1.5.0-0.1) ... 391s Setting up fonts-lmodern (2.005-1) ... 391s Setting up libharfbuzz0b:arm64 (10.2.0-1) ... 391s Setting up libthai-data (0.1.29-2build1) ... 391s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 391s Setting up libpaper2:arm64 (2.2.5-0.3) ... 391s Setting up ca-certificates-java (20240118) ... 391s No JRE found. Skipping Java certificates setup. 391s Setting up xdg-utils (1.2.1-2ubuntu1) ... 391s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 391s Setting up libsz2:arm64 (1.1.3-1) ... 391s Setting up libsynctex2:arm64 (2024.20240313.70630+ds-5build2) ... 391s Setting up libpotrace0:arm64 (1.16-2build1) ... 391s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 391s Setting up libice6:arm64 (2:1.1.1-1) ... 391s Setting up liblapack3:arm64 (3.12.1-2) ... 391s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 391s Setting up openjdk-21-jre-headless:arm64 (21.0.6+7-1) ... 391s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode 391s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 391s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 391s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 391s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 391s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 391s Setting up libcommons-parent-java (56-1) ... 391s Setting up libpaper-utils (2.2.5-0.3) ... 391s Setting up libthai0:arm64 (0.1.29-2build1) ... 391s Setting up libptexenc1:arm64 (2024.20240313.70630+ds-5build2) ... 391s Setting up libhdf5-310:arm64 (1.14.5+repack-3) ... 391s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 391s Setting up libfontconfig1:arm64 (2.15.0-2ubuntu1) ... 391s Setting up libsm6:arm64 (2:1.2.4-1) ... 391s Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ... 391s Setting up fontconfig (2.15.0-2ubuntu1) ... 394s Regenerating fonts cache... done. 394s Setting up libxft2:arm64 (2.3.6-1build1) ... 394s Setting up libcommons-io-java (2.18.0-1) ... 394s Setting up libtk8.6:arm64 (8.6.16-1) ... 394s Setting up libpango-1.0-0:arm64 (1.56.1-1) ... 394s Setting up libcairo2:arm64 (1.18.2-2) ... 394s Setting up hdf5-tools (1.14.5+repack-3) ... 394s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 394s Setting up libpangoft2-1.0-0:arm64 (1.56.1-1) ... 394s Setting up libpangocairo-1.0-0:arm64 (1.56.1-1) ... 394s Setting up libxmu6:arm64 (2:1.1.3-3build2) ... 394s Setting up libxaw7:arm64 (2:1.0.16-1) ... 394s Setting up r-base-core (4.4.3-1) ... 394s Creating config file /etc/R/Renviron with new version 394s Setting up r-cran-labeling (0.4.3-1) ... 394s Setting up r-cran-lattice (0.22-6-1) ... 394s Setting up r-cran-nlme (3.1.167-1) ... 394s Setting up r-cran-farver (2.1.2-1) ... 394s Setting up r-cran-viridislite (0.4.2-2) ... 394s Setting up texlive-binaries (2024.20240313.70630+ds-5build2) ... 394s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 394s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 394s Setting up r-cran-r6 (2.6.1-1) ... 394s Setting up r-cran-pkgkitten (0.2.4-1) ... 394s Setting up texlive-base (2024.20250309-1) ... 395s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 396s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 396s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 396s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 397s Setting up r-cran-magrittr (2.0.3-1) ... 397s Setting up r-cran-littler (0.3.20-2) ... 397s Setting up r-cran-rcpp (1.0.14-1) ... 397s Setting up r-cran-rlang (1.1.5-1) ... 397s Setting up littler (0.3.20-2) ... 397s Setting up r-cran-withr (3.0.2+dfsg-1) ... 397s Setting up r-cran-fansi (1.0.5-1) ... 397s Setting up r-cran-mass (7.3-64-1) ... 397s Setting up r-cran-glue (1.8.0-1) ... 397s Setting up r-cran-cli (3.6.4-1) ... 397s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 397s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 397s Setting up r-cran-utf8 (1.2.4-1) ... 397s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 397s Setting up texlive-latex-base (2024.20250309-1) ... 397s Setting up r-cran-plyr (1.8.9-1) ... 397s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 397s Setting up r-cran-isoband (0.2.7-1) ... 397s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 397s Setting up r-cran-matrix (1.7-3-1) ... 397s Setting up r-cran-mgcv (1.9-1-1) ... 397s Setting up r-cran-vctrs (0.6.5-1) ... 397s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 397s Setting up r-cran-reshape (0.8.9-1) ... 397s Setting up r-cran-munsell (0.5.1-1) ... 397s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 397s Setting up r-cran-gridextra (2.3-3build1) ... 397s Setting up r-cran-scales (1.3.0-1) ... 397s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 397s Processing triggers for libc-bin (2.41-1ubuntu1) ... 397s Processing triggers for man-db (2.13.0-1) ... 398s Processing triggers for install-info (7.1.1-1) ... 399s Processing triggers for ca-certificates-java (20240118) ... 400s Adding debian:ACCVRAIZ1.pem 400s Adding debian:AC_RAIZ_FNMT-RCM.pem 400s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 400s Adding debian:ANF_Secure_Server_Root_CA.pem 400s Adding debian:Actalis_Authentication_Root_CA.pem 400s Adding debian:AffirmTrust_Commercial.pem 400s Adding debian:AffirmTrust_Networking.pem 400s Adding debian:AffirmTrust_Premium.pem 400s Adding debian:AffirmTrust_Premium_ECC.pem 400s Adding debian:Amazon_Root_CA_1.pem 400s Adding debian:Amazon_Root_CA_2.pem 400s Adding debian:Amazon_Root_CA_3.pem 400s Adding debian:Amazon_Root_CA_4.pem 400s Adding debian:Atos_TrustedRoot_2011.pem 400s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 400s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 400s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 400s Adding debian:BJCA_Global_Root_CA1.pem 400s Adding debian:BJCA_Global_Root_CA2.pem 400s Adding debian:Baltimore_CyberTrust_Root.pem 400s Adding debian:Buypass_Class_2_Root_CA.pem 400s Adding debian:Buypass_Class_3_Root_CA.pem 400s Adding debian:CA_Disig_Root_R2.pem 400s Adding debian:CFCA_EV_ROOT.pem 400s Adding debian:COMODO_Certification_Authority.pem 400s Adding debian:COMODO_ECC_Certification_Authority.pem 400s Adding debian:COMODO_RSA_Certification_Authority.pem 400s Adding debian:Certainly_Root_E1.pem 400s Adding debian:Certainly_Root_R1.pem 400s Adding debian:Certigna.pem 400s Adding debian:Certigna_Root_CA.pem 400s Adding debian:Certum_EC-384_CA.pem 400s Adding debian:Certum_Trusted_Network_CA.pem 400s Adding debian:Certum_Trusted_Network_CA_2.pem 400s Adding debian:Certum_Trusted_Root_CA.pem 400s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 400s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 400s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 400s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 400s Adding debian:Comodo_AAA_Services_root.pem 400s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 400s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 400s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 400s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 400s Adding debian:DigiCert_Assured_ID_Root_CA.pem 400s Adding debian:DigiCert_Assured_ID_Root_G2.pem 400s Adding debian:DigiCert_Assured_ID_Root_G3.pem 400s Adding debian:DigiCert_Global_Root_CA.pem 400s Adding debian:DigiCert_Global_Root_G2.pem 400s Adding debian:DigiCert_Global_Root_G3.pem 400s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 400s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 400s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 400s Adding debian:DigiCert_Trusted_Root_G4.pem 400s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 400s Adding debian:Entrust_Root_Certification_Authority.pem 400s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 400s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 400s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 400s Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem 400s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 400s Adding debian:GLOBALTRUST_2020.pem 400s Adding debian:GTS_Root_R1.pem 400s Adding debian:GTS_Root_R2.pem 400s Adding debian:GTS_Root_R3.pem 400s Adding debian:GTS_Root_R4.pem 400s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 400s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 400s Adding debian:GlobalSign_Root_CA.pem 400s Adding debian:GlobalSign_Root_CA_-_R3.pem 400s Adding debian:GlobalSign_Root_CA_-_R6.pem 400s Adding debian:GlobalSign_Root_E46.pem 400s Adding debian:GlobalSign_Root_R46.pem 400s Adding debian:Go_Daddy_Class_2_CA.pem 400s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 400s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 400s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 400s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 400s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 400s Adding debian:HiPKI_Root_CA_-_G1.pem 400s Adding debian:Hongkong_Post_Root_CA_3.pem 400s Adding debian:ISRG_Root_X1.pem 400s Adding debian:ISRG_Root_X2.pem 400s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 400s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 400s Adding debian:Izenpe.com.pem 400s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 400s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 400s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 400s Adding debian:NAVER_Global_Root_Certification_Authority.pem 400s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 400s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 400s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 400s Adding debian:QuoVadis_Root_CA_1_G3.pem 400s Adding debian:QuoVadis_Root_CA_2.pem 400s Adding debian:QuoVadis_Root_CA_2_G3.pem 400s Adding debian:QuoVadis_Root_CA_3.pem 400s Adding debian:QuoVadis_Root_CA_3_G3.pem 400s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 400s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 400s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 400s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 400s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 400s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 400s Adding debian:SZAFIR_ROOT_CA2.pem 400s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 400s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 400s Adding debian:SecureSign_RootCA11.pem 400s Adding debian:SecureSign_Root_CA12.pem 400s Adding debian:SecureSign_Root_CA14.pem 400s Adding debian:SecureSign_Root_CA15.pem 400s Adding debian:SecureTrust_CA.pem 400s Adding debian:Secure_Global_CA.pem 400s Adding debian:Security_Communication_ECC_RootCA1.pem 400s Adding debian:Security_Communication_RootCA2.pem 400s Adding debian:Security_Communication_RootCA3.pem 400s Adding debian:Starfield_Class_2_CA.pem 400s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 400s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 400s Adding debian:SwissSign_Gold_CA_-_G2.pem 400s Adding debian:SwissSign_Silver_CA_-_G2.pem 400s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 400s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 400s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 400s Adding debian:TWCA_CYBER_Root_CA.pem 400s Adding debian:TWCA_Global_Root_CA.pem 400s Adding debian:TWCA_Root_Certification_Authority.pem 400s Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem 400s Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem 400s Adding debian:TeliaSonera_Root_CA_v1.pem 400s Adding debian:Telia_Root_CA_v2.pem 400s Adding debian:TrustAsia_Global_Root_CA_G3.pem 400s Adding debian:TrustAsia_Global_Root_CA_G4.pem 400s Adding debian:Trustwave_Global_Certification_Authority.pem 400s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 400s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 400s Adding debian:TunTrust_Root_CA.pem 400s Adding debian:UCA_Extended_Validation_Root.pem 400s Adding debian:UCA_Global_G2_Root.pem 400s Adding debian:USERTrust_ECC_Certification_Authority.pem 400s Adding debian:USERTrust_RSA_Certification_Authority.pem 400s Adding debian:XRamp_Global_CA_Root.pem 400s Adding debian:certSIGN_ROOT_CA.pem 400s Adding debian:certSIGN_Root_CA_G2.pem 400s Adding debian:e-Szigno_Root_CA_2017.pem 400s Adding debian:ePKI_Root_Certification_Authority.pem 400s Adding debian:emSign_ECC_Root_CA_-_C3.pem 400s Adding debian:emSign_ECC_Root_CA_-_G3.pem 400s Adding debian:emSign_Root_CA_-_C1.pem 400s Adding debian:emSign_Root_CA_-_G1.pem 400s Adding debian:vTrus_ECC_Root_CA.pem 400s Adding debian:vTrus_Root_CA.pem 400s done. 400s Setting up default-jre-headless (2:1.21-76) ... 400s Setting up nanook (1.33+dfsg-6) ... 400s Processing triggers for tex-common (6.19) ... 401s Running updmap-sys. This may take some time... done. 401s Running mktexlsr /var/lib/texmf ... done. 401s Building format(s) --all. 440s This may take some time... done. 441s autopkgtest [08:41:02]: test run-unit-test: [----------------------- 452s 452s NanoOK v1.33 452s 452s Comments/bugs to: richard.leggett@earlham.ac.uk 452s Follow NanoOK on twitter: @NanoOK_Software 452s 452s Scripts dir: /usr/share/nanook/bin 452s 452s Checking dependencies 452s *** ERROR: Couldn't find Rscript - is R installed? *** 452s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 452s h5dump: Version 1.14.5 452s 452s Making directory /tmp/autopkgtest.cqYYKx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/fasta 452s Checking FAST5 directory structure... 452s Using pass/fail dirs: yes 452s Using batch dirs: no 452s Using barcodes: no 452s 455s Processing [ ] 0/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 455s 455s DONE 456s 456s NanoOK v1.33 456s 456s Comments/bugs to: richard.leggett@earlham.ac.uk 456s Follow NanoOK on twitter: @NanoOK_Software 456s 456s Scripts dir: /usr/share/nanook/bin 456s 456s Checking dependencies 456s *** ERROR: Couldn't find Rscript - is R installed? *** 456s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 456s h5dump: Version 1.14.5 456s 456s Making directory /tmp/autopkgtest.cqYYKx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/last 456s Making directory /tmp/autopkgtest.cqYYKx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/logs/last 456s Checking FASTA/Q directory structure... 456s Using pass/fail dirs: yes 456s Using batch dirs: no 456s Using barcodes: no 456s 459s Processing [ ] 0/3 Processing [================ ] 1/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 459s 459s DONE 459s 459s NanoOK v1.33 459s 459s Comments/bugs to: richard.leggett@earlham.ac.uk 459s Follow NanoOK on twitter: @NanoOK_Software 459s 459s Scripts dir: /usr/share/nanook/bin 459s 459s Checking dependencies 459s *** ERROR: Couldn't find Rscript - is R installed? *** 459s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 459s h5dump: Version 1.14.5 459s 459s Checking FASTA/Q directory structure... 459s Using pass/fail dirs: yes 459s Using batch dirs: no 459s Using barcodes: no 459s 459s Using .sizes file ecoli_dh10b_cs.fasta.sizes 459s Note: if you have changed the reference file, you need to delete the .sizes file and re-run. 459s 459s Reading reference sizes and making directories 459s Escherichia_coli 4686137 459s Control_sequence 3560 459s 459s Calculating reference GC 459s Escherichia_coli 460s Control_sequence 460s 460s Parsing Template 460s [ ] 0/1 [==================================================] 1/1 460s Warning: not many alignments (1) found to process. 460s 460s Parsing Complement 460s [ ] 0/1 [==================================================] 1/1 460s Warning: not many alignments (1) found to process. 460s 460s Parsing 2D 460s [==================================================] 1/1 460s Warning: not many alignments (1) found to process. 460s 460s Writing analysis files 460s [================ ] 1/3 [================================= ] 2/3 [==================================================] 3/3 460s Writing object 460s 460s Plotting graphs 462s [ ] 0/1 [==================================================] 1/1 462s 462s Making report 462s Can't find /tmp/autopkgtest.cqYYKx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/graphs_last_passonly/all_Template_lengths.pdf 462s Can't find /tmp/autopkgtest.cqYYKx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/graphs_last_passonly/all_Complement_lengths.pdf 462s Can't find /tmp/autopkgtest.cqYYKx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/graphs_last_passonly/all_2D_lengths.pdf 462s Can't find /tmp/autopkgtest.cqYYKx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/graphs_last_passonly/all_Template_21mers.pdf 462s Can't find /tmp/autopkgtest.cqYYKx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/graphs_last_passonly/all_Complement_21mers.pdf 462s Can't find /tmp/autopkgtest.cqYYKx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/graphs_last_passonly/all_2D_21mers.pdf 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s Error: motif list smaller than 10 462s 462s Making PDF 462s pdflatex output /tmp/autopkgtest.cqYYKx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/logs/pdflatex_output_log_last_passonly.txt 462s 462s Done 462s autopkgtest [08:41:23]: test run-unit-test: -----------------------] 463s run-unit-test PASS 463s autopkgtest [08:41:24]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 463s autopkgtest [08:41:24]: @@@@@@@@@@@@@@@@@@@@ summary 463s run-unit-test PASS 482s nova [W] Using flock in prodstack6-arm64 482s Creating nova instance adt-plucky-arm64-nanook-20250315-083341-juju-7f2275-prod-proposed-migration-environment-2-77529209-5866-4106-b936-8abba37174eb from image adt/ubuntu-plucky-arm64-server-20250315.img (UUID bd6e766c-b51f-4b53-86d6-23aa4d18f524)... 482s nova [W] Timed out waiting for bdc5f71b-a02e-41fe-814f-161b0eb33365 to get deleted.