0s autopkgtest [02:07:18]: starting date and time: 2024-11-15 02:07:18+0000 0s autopkgtest [02:07:18]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [02:07:18]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ej837n_5/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:matplotlib --apt-upgrade multiqc --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=matplotlib/3.8.3-3ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-42.secgroup --name adt-plucky-arm64-multiqc-20241115-020718-juju-7f2275-prod-proposed-migration-environment-20-14578363-bdb5-4112-8105-53e9f72becf1 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 1456s autopkgtest [02:31:34]: testbed dpkg architecture: arm64 1456s autopkgtest [02:31:34]: testbed apt version: 2.9.8 1456s autopkgtest [02:31:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1457s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 1459s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1030 kB] 1484s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 1484s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 1486s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 1486s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [164 kB] 1493s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 1493s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [773 kB] 1514s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [6116 B] 1514s Fetched 2221 kB in 57s (38.9 kB/s) 1514s Reading package lists... 1516s Reading package lists... 1517s Building dependency tree... 1517s Reading state information... 1517s Calculating upgrade... 1518s The following packages will be upgraded: 1518s firmware-sof-signed libcap-ng0 libexpat1 lxd-installer man-db pastebinit 1518s python3-systemd xfsprogs 1518s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1518s Need to get 9481 kB of archives. 1518s After this operation, 549 kB of additional disk space will be used. 1518s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 firmware-sof-signed all 2024.06-1ubuntu2 [7083 kB] 1522s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libcap-ng0 arm64 0.8.5-3build1 [15.0 kB] 1522s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libexpat1 arm64 2.6.4-1 [76.6 kB] 1522s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 man-db arm64 2.13.0-1 [1320 kB] 1523s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 lxd-installer all 9 [5084 B] 1523s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 pastebinit all 1.7.1-1 [14.9 kB] 1523s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-systemd arm64 235-1build5 [46.7 kB] 1523s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 xfsprogs arm64 6.8.0-2.2ubuntu2 [919 kB] 1523s Preconfiguring packages ... 1523s Fetched 9481 kB in 5s (1914 kB/s) 1523s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79925 files and directories currently installed.) 1523s Preparing to unpack .../firmware-sof-signed_2024.06-1ubuntu2_all.deb ... 1523s Unpacking firmware-sof-signed (2024.06-1ubuntu2) over (2024.06-1ubuntu1) ... 1524s Preparing to unpack .../libcap-ng0_0.8.5-3build1_arm64.deb ... 1524s Unpacking libcap-ng0:arm64 (0.8.5-3build1) over (0.8.5-1) ... 1524s Setting up libcap-ng0:arm64 (0.8.5-3build1) ... 1524s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79951 files and directories currently installed.) 1524s Preparing to unpack .../0-libexpat1_2.6.4-1_arm64.deb ... 1524s Unpacking libexpat1:arm64 (2.6.4-1) over (2.6.2-2) ... 1524s Preparing to unpack .../1-man-db_2.13.0-1_arm64.deb ... 1524s Unpacking man-db (2.13.0-1) over (2.12.1-3) ... 1524s Preparing to unpack .../2-lxd-installer_9_all.deb ... 1524s Unpacking lxd-installer (9) over (8) ... 1524s Preparing to unpack .../3-pastebinit_1.7.1-1_all.deb ... 1524s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ... 1524s Preparing to unpack .../4-python3-systemd_235-1build5_arm64.deb ... 1524s Unpacking python3-systemd (235-1build5) over (235-1build4) ... 1524s Preparing to unpack .../5-xfsprogs_6.8.0-2.2ubuntu2_arm64.deb ... 1524s Unpacking xfsprogs (6.8.0-2.2ubuntu2) over (6.8.0-2.2ubuntu1) ... 1524s Setting up libexpat1:arm64 (2.6.4-1) ... 1524s Setting up firmware-sof-signed (2024.06-1ubuntu2) ... 1524s Setting up pastebinit (1.7.1-1) ... 1524s Setting up man-db (2.13.0-1) ... 1524s Updating database of manual pages ... 1526s man-db.service is a disabled or a static unit not running, not starting it. 1527s Setting up xfsprogs (6.8.0-2.2ubuntu2) ... 1527s update-initramfs: deferring update (trigger activated) 1527s Setting up lxd-installer (9) ... 1527s Setting up python3-systemd (235-1build5) ... 1528s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1528s Processing triggers for initramfs-tools (0.142ubuntu34) ... 1528s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 1528s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 1541s System running in EFI mode, skipping. 1541s Reading package lists... 1542s Building dependency tree... 1542s Reading state information... 1542s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1543s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 1543s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 1543s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 1543s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 1544s Reading package lists... 1544s Reading package lists... 1544s Building dependency tree... 1544s Reading state information... 1545s Calculating upgrade... 1545s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1545s Reading package lists... 1545s Building dependency tree... 1545s Reading state information... 1546s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1546s autopkgtest [02:33:04]: rebooting testbed after setup commands that affected boot 1574s autopkgtest [02:33:32]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 1581s autopkgtest [02:33:39]: @@@@@@@@@@@@@@@@@@@@ apt-source multiqc 1586s Get:1 http://ftpmaster.internal/ubuntu plucky/universe multiqc 1.21+dfsg-2 (dsc) [2772 B] 1586s Get:2 http://ftpmaster.internal/ubuntu plucky/universe multiqc 1.21+dfsg-2 (tar) [17.0 MB] 1586s Get:3 http://ftpmaster.internal/ubuntu plucky/universe multiqc 1.21+dfsg-2 (tar) [1937 kB] 1586s Get:4 http://ftpmaster.internal/ubuntu plucky/universe multiqc 1.21+dfsg-2 (diff) [11.9 kB] 1587s gpgv: Signature made Sat Aug 31 11:27:49 2024 UTC 1587s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 1587s gpgv: issuer "tchet@debian.org" 1587s gpgv: Can't check signature: No public key 1587s dpkg-source: warning: cannot verify inline signature for ./multiqc_1.21+dfsg-2.dsc: no acceptable signature found 1588s autopkgtest [02:33:46]: testing package multiqc version 1.21+dfsg-2 1589s autopkgtest [02:33:47]: build not needed 1602s autopkgtest [02:34:00]: test run-unit-test: preparing testbed 1605s Reading package lists... 1605s Building dependency tree... 1605s Reading state information... 1605s Starting pkgProblemResolver with broken count: 0 1605s Starting 2 pkgProblemResolver with broken count: 0 1605s Done 1606s The following additional packages will be installed: 1606s blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono 1606s fonts-glyphicons-halflings fonts-lyx libblas3 libdeflate0 libfontconfig1 1606s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libimagequant0 libjbig0 1606s libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery libjs-jquery-metadata 1606s libjs-jquery-tablesorter libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 1606s liblerc4 libopenjp2-7 libqhull-r8.0 libraqm0 libsharpyuv0 libtcl8.6 libtiff6 1606s libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 1606s libxss1 multiqc python-matplotlib-data python3-appdirs python3-brotli 1606s python3-click python3-colorama python3-coloredlogs python3-colormath 1606s python3-contourpy python3-cycler python3-dateutil python3-decorator 1606s python3-fastjsonschema python3-fonttools python3-fs python3-humanfriendly 1606s python3-humanize python3-importlib-metadata python3-jupyter-core 1606s python3-kiwisolver python3-lxml python3-lz4 python3-lzstring 1606s python3-markdown python3-matplotlib python3-mpmath python3-nbformat 1606s python3-networkx python3-numpy python3-packaging python3-pil 1606s python3-pil.imagetk python3-platformdirs python3-plotly python3-pyaml-env 1606s python3-rich-click python3-scipy python3-six python3-spectra python3-sympy 1606s python3-tenacity python3-tk python3-traitlets python3-tz python3-ufolib2 1606s python3-unicodedata2 python3.12-tk tk8.6-blt2.5 unicode-data x11-common 1606s Suggested packages: 1606s blt-demo libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 python-cycler-doc 1606s python-fastjsonschema-doc python3-pip python-lxml-doc python-markdown-doc 1606s cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 1606s inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi 1606s python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado 1606s texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 1606s python3-gdal python3-pydot python3-pygraphviz gcc gfortran python-numpy-doc 1606s python3-dev python3-pytest python-pil-doc python3-pandas python3-ipykernel 1606s python-scipy-doc texlive-fonts-extra python-sympy-doc python-tenacity-doc 1606s tix python3-tk-dbg python3.13-tk python-traitlets-doc 1606s Recommended packages: 1606s javascript-common node-clipboard libjs-filesaver pandoc texlive-xetex 1606s python3-bs4 python3-cssselect python3-html5lib python3-olefile g++ 1606s | c++-compiler isympy-common 1606s The following NEW packages will be installed: 1606s autopkgtest-satdep blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono 1606s fonts-glyphicons-halflings fonts-lyx libblas3 libdeflate0 libfontconfig1 1606s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libimagequant0 libjbig0 1606s libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery libjs-jquery-metadata 1606s libjs-jquery-tablesorter libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 1606s liblerc4 libopenjp2-7 libqhull-r8.0 libraqm0 libsharpyuv0 libtcl8.6 libtiff6 1606s libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 1606s libxss1 multiqc python-matplotlib-data python3-appdirs python3-brotli 1606s python3-click python3-colorama python3-coloredlogs python3-colormath 1606s python3-contourpy python3-cycler python3-dateutil python3-decorator 1606s python3-fastjsonschema python3-fonttools python3-fs python3-humanfriendly 1606s python3-humanize python3-importlib-metadata python3-jupyter-core 1606s python3-kiwisolver python3-lxml python3-lz4 python3-lzstring 1606s python3-markdown python3-matplotlib python3-mpmath python3-nbformat 1606s python3-networkx python3-numpy python3-packaging python3-pil 1606s python3-pil.imagetk python3-platformdirs python3-plotly python3-pyaml-env 1606s python3-rich-click python3-scipy python3-six python3-spectra python3-sympy 1606s python3-tenacity python3-tk python3-traitlets python3-tz python3-ufolib2 1606s python3-unicodedata2 python3.12-tk tk8.6-blt2.5 unicode-data x11-common 1606s 0 upgraded, 91 newly installed, 0 to remove and 0 not upgraded. 1606s Need to get 71.5 MB/71.5 MB of archives. 1606s After this operation, 368 MB of additional disk space will be used. 1606s Get:1 /tmp/autopkgtest.UeVRbp/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [704 B] 1606s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [987 kB] 1607s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 1607s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 1607s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 1607s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 1607s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 1607s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 1607s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 1607s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 1607s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.15-1 [774 kB] 1607s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7build1 [618 kB] 1607s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 blt arm64 2.5.3+dfsg-7build1 [4840 B] 1607s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 1607s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-lyx all 2.4.2.1-1 [171 kB] 1607s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 1607s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB] 1607s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 1607s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB] 1607s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 1607s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.0.1-1 [487 kB] 1607s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libimagequant0 arm64 2.18.0-1build1 [37.1 kB] 1607s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 1607s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 1607s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 1607s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 1607s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-metadata all 12-4 [6582 B] 1607s Get:28 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-4 [192 kB] 1607s Get:29 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 1607s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 1607s Get:31 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 1607s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB] 1607s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 1607s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB] 1607s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libraqm0 arm64 0.10.1-1build1 [14.7 kB] 1607s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 1607s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 1607s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 1608s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 1608s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebpdemux2 arm64 1.4.0-0.1 [12.3 kB] 1608s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebpmux3 arm64 1.4.0-0.1 [25.1 kB] 1608s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libxslt1.1 arm64 1.1.39-0exp1ubuntu1 [167 kB] 1608s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-colorama all 0.4.6-4 [32.1 kB] 1608s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-importlib-metadata all 8.5.0-1 [20.7 kB] 1608s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-click all 8.1.7-2 [79.5 kB] 1608s Get:46 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-humanfriendly all 10.0-6 [70.8 kB] 1608s Get:47 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-coloredlogs all 15.0.1-1 [38.2 kB] 1608s Get:48 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-humanize all 4.11.0-1 [58.0 kB] 1608s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-markdown all 3.6-1 [73.4 kB] 1608s Get:50 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python-matplotlib-data all 3.8.3-3ubuntu1 [2928 kB] 1608s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-six all 1.16.0-7 [13.1 kB] 1608s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dateutil all 2.9.0-2 [80.3 kB] 1608s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu1 [182 kB] 1608s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-pil arm64 10.4.0-1ubuntu1 [456 kB] 1608s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-tk arm64 3.12.7-3 [115 kB] 1608s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tk arm64 3.12.6-1ubuntu1 [9806 B] 1608s Get:57 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pil.imagetk arm64 10.4.0-1ubuntu1 [9504 B] 1608s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 1608s Get:59 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-contourpy arm64 1.3.0-2 [179 kB] 1608s Get:60 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-cycler all 0.12.1-1 [9716 B] 1608s Get:61 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-brotli arm64 1.1.0-2build2 [340 kB] 1608s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 1608s Get:63 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB] 1609s Get:64 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 1609s Get:65 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-mpmath all 1.3.0-1 [425 kB] 1609s Get:66 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sympy all 1.13.3-1 [4228 kB] 1609s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tz all 2024.1-2 [31.4 kB] 1609s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB] 1609s Get:69 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fs all 2.4.16-4 [91.3 kB] 1609s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lxml arm64 5.3.0-1 [1205 kB] 1609s Get:71 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build4 [26.7 kB] 1609s Get:72 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-unicodedata2 arm64 15.1.0+ds-1build2 [360 kB] 1609s Get:73 http://ftpmaster.internal/ubuntu plucky/universe arm64 unicode-data all 15.1.0-1 [8878 kB] 1609s Get:74 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fonttools arm64 4.46.0-1build2 [1398 kB] 1609s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-kiwisolver arm64 1.4.7-2build1 [62.0 kB] 1609s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 1609s Get:77 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python3-matplotlib arm64 3.8.3-3ubuntu1 [4612 kB] 1609s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fastjsonschema all 2.20.0-1 [20.1 kB] 1609s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-platformdirs all 4.3.6-1 [16.8 kB] 1609s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB] 1609s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-jupyter-core all 5.7.2-4 [28.0 kB] 1609s Get:82 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-nbformat all 5.9.1-1 [41.2 kB] 1609s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tenacity all 8.5.0-0ubuntu1 [17.0 kB] 1609s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-plotly all 5.20.0+dfsg-1 [2766 kB] 1609s Get:85 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pyaml-env all 1.2.1-2 [9090 B] 1609s Get:86 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-rich-click all 1.6.0-1 [17.6 kB] 1609s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 1610s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-colormath all 3.0.0-4 [36.6 kB] 1610s Get:89 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-spectra all 0.0.11-4 [17.2 kB] 1610s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-lzstring all 1.0.4-3 [6262 B] 1610s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 multiqc all 1.21+dfsg-2 [733 kB] 1611s Fetched 71.5 MB in 3s (21.1 MB/s) 1611s Selecting previously unselected package libtcl8.6:arm64. 1611s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79957 files and directories currently installed.) 1611s Preparing to unpack .../00-libtcl8.6_8.6.15+dfsg-2_arm64.deb ... 1611s Unpacking libtcl8.6:arm64 (8.6.15+dfsg-2) ... 1611s Selecting previously unselected package fonts-dejavu-mono. 1611s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 1611s Unpacking fonts-dejavu-mono (2.37-8) ... 1611s Selecting previously unselected package fonts-dejavu-core. 1611s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 1611s Unpacking fonts-dejavu-core (2.37-8) ... 1611s Selecting previously unselected package fontconfig-config. 1611s Preparing to unpack .../03-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 1611s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 1611s Selecting previously unselected package libfontconfig1:arm64. 1611s Preparing to unpack .../04-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 1611s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 1611s Selecting previously unselected package libxrender1:arm64. 1611s Preparing to unpack .../05-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 1611s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 1611s Selecting previously unselected package libxft2:arm64. 1611s Preparing to unpack .../06-libxft2_2.3.6-1build1_arm64.deb ... 1611s Unpacking libxft2:arm64 (2.3.6-1build1) ... 1611s Selecting previously unselected package x11-common. 1611s Preparing to unpack .../07-x11-common_1%3a7.7+23ubuntu3_all.deb ... 1611s Unpacking x11-common (1:7.7+23ubuntu3) ... 1611s Selecting previously unselected package libxss1:arm64. 1611s Preparing to unpack .../08-libxss1_1%3a1.2.3-1build3_arm64.deb ... 1611s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 1611s Selecting previously unselected package libtk8.6:arm64. 1611s Preparing to unpack .../09-libtk8.6_8.6.15-1_arm64.deb ... 1611s Unpacking libtk8.6:arm64 (8.6.15-1) ... 1611s Selecting previously unselected package tk8.6-blt2.5. 1612s Preparing to unpack .../10-tk8.6-blt2.5_2.5.3+dfsg-7build1_arm64.deb ... 1612s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 1612s Selecting previously unselected package blt. 1612s Preparing to unpack .../11-blt_2.5.3+dfsg-7build1_arm64.deb ... 1612s Unpacking blt (2.5.3+dfsg-7build1) ... 1612s Selecting previously unselected package fonts-glyphicons-halflings. 1612s Preparing to unpack .../12-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 1612s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1612s Selecting previously unselected package fonts-lyx. 1612s Preparing to unpack .../13-fonts-lyx_2.4.2.1-1_all.deb ... 1612s Unpacking fonts-lyx (2.4.2.1-1) ... 1612s Selecting previously unselected package libblas3:arm64. 1612s Preparing to unpack .../14-libblas3_3.12.0-3build2_arm64.deb ... 1612s Unpacking libblas3:arm64 (3.12.0-3build2) ... 1612s Selecting previously unselected package libdeflate0:arm64. 1612s Preparing to unpack .../15-libdeflate0_1.22-1_arm64.deb ... 1612s Unpacking libdeflate0:arm64 (1.22-1) ... 1612s Selecting previously unselected package libgfortran5:arm64. 1612s Preparing to unpack .../16-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 1612s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 1612s Selecting previously unselected package libgomp1:arm64. 1612s Preparing to unpack .../17-libgomp1_14.2.0-8ubuntu1_arm64.deb ... 1612s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ... 1612s Selecting previously unselected package libgraphite2-3:arm64. 1612s Preparing to unpack .../18-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 1612s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 1612s Selecting previously unselected package libharfbuzz0b:arm64. 1612s Preparing to unpack .../19-libharfbuzz0b_10.0.1-1_arm64.deb ... 1612s Unpacking libharfbuzz0b:arm64 (10.0.1-1) ... 1612s Selecting previously unselected package libimagequant0:arm64. 1612s Preparing to unpack .../20-libimagequant0_2.18.0-1build1_arm64.deb ... 1612s Unpacking libimagequant0:arm64 (2.18.0-1build1) ... 1612s Selecting previously unselected package libjpeg-turbo8:arm64. 1612s Preparing to unpack .../21-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 1612s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 1612s Selecting previously unselected package libjpeg8:arm64. 1612s Preparing to unpack .../22-libjpeg8_8c-2ubuntu11_arm64.deb ... 1612s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 1612s Selecting previously unselected package libjs-bootstrap. 1612s Preparing to unpack .../23-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 1612s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 1612s Selecting previously unselected package libjs-jquery. 1612s Preparing to unpack .../24-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 1612s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1612s Selecting previously unselected package libjs-jquery-metadata. 1612s Preparing to unpack .../25-libjs-jquery-metadata_12-4_all.deb ... 1612s Unpacking libjs-jquery-metadata (12-4) ... 1612s Selecting previously unselected package libjs-jquery-tablesorter. 1612s Preparing to unpack .../26-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-4_all.deb ... 1612s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 1612s Selecting previously unselected package libjs-jquery-ui. 1612s Preparing to unpack .../27-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 1612s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 1612s Selecting previously unselected package liblapack3:arm64. 1612s Preparing to unpack .../28-liblapack3_3.12.0-3build2_arm64.deb ... 1612s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 1612s Selecting previously unselected package liblbfgsb0:arm64. 1612s Preparing to unpack .../29-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ... 1612s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 1612s Selecting previously unselected package liblcms2-2:arm64. 1612s Preparing to unpack .../30-liblcms2-2_2.16-2_arm64.deb ... 1612s Unpacking liblcms2-2:arm64 (2.16-2) ... 1612s Selecting previously unselected package liblerc4:arm64. 1612s Preparing to unpack .../31-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 1612s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 1612s Selecting previously unselected package libqhull-r8.0:arm64. 1612s Preparing to unpack .../32-libqhull-r8.0_2020.2-6build1_arm64.deb ... 1612s Unpacking libqhull-r8.0:arm64 (2020.2-6build1) ... 1612s Selecting previously unselected package libraqm0:arm64. 1612s Preparing to unpack .../33-libraqm0_0.10.1-1build1_arm64.deb ... 1612s Unpacking libraqm0:arm64 (0.10.1-1build1) ... 1612s Selecting previously unselected package libsharpyuv0:arm64. 1612s Preparing to unpack .../34-libsharpyuv0_1.4.0-0.1_arm64.deb ... 1612s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 1612s Selecting previously unselected package libjbig0:arm64. 1612s Preparing to unpack .../35-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 1612s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 1612s Selecting previously unselected package libwebp7:arm64. 1612s Preparing to unpack .../36-libwebp7_1.4.0-0.1_arm64.deb ... 1612s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 1612s Selecting previously unselected package libtiff6:arm64. 1612s Preparing to unpack .../37-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 1612s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 1613s Selecting previously unselected package libwebpdemux2:arm64. 1613s Preparing to unpack .../38-libwebpdemux2_1.4.0-0.1_arm64.deb ... 1613s Unpacking libwebpdemux2:arm64 (1.4.0-0.1) ... 1613s Selecting previously unselected package libwebpmux3:arm64. 1613s Preparing to unpack .../39-libwebpmux3_1.4.0-0.1_arm64.deb ... 1613s Unpacking libwebpmux3:arm64 (1.4.0-0.1) ... 1613s Selecting previously unselected package libxslt1.1:arm64. 1613s Preparing to unpack .../40-libxslt1.1_1.1.39-0exp1ubuntu1_arm64.deb ... 1613s Unpacking libxslt1.1:arm64 (1.1.39-0exp1ubuntu1) ... 1613s Selecting previously unselected package python3-colorama. 1613s Preparing to unpack .../41-python3-colorama_0.4.6-4_all.deb ... 1613s Unpacking python3-colorama (0.4.6-4) ... 1613s Selecting previously unselected package python3-importlib-metadata. 1613s Preparing to unpack .../42-python3-importlib-metadata_8.5.0-1_all.deb ... 1613s Unpacking python3-importlib-metadata (8.5.0-1) ... 1613s Selecting previously unselected package python3-click. 1613s Preparing to unpack .../43-python3-click_8.1.7-2_all.deb ... 1613s Unpacking python3-click (8.1.7-2) ... 1613s Selecting previously unselected package python3-humanfriendly. 1613s Preparing to unpack .../44-python3-humanfriendly_10.0-6_all.deb ... 1613s Unpacking python3-humanfriendly (10.0-6) ... 1613s Selecting previously unselected package python3-coloredlogs. 1613s Preparing to unpack .../45-python3-coloredlogs_15.0.1-1_all.deb ... 1613s Unpacking python3-coloredlogs (15.0.1-1) ... 1613s Selecting previously unselected package python3-humanize. 1613s Preparing to unpack .../46-python3-humanize_4.11.0-1_all.deb ... 1613s Unpacking python3-humanize (4.11.0-1) ... 1613s Selecting previously unselected package python3-markdown. 1613s Preparing to unpack .../47-python3-markdown_3.6-1_all.deb ... 1613s Unpacking python3-markdown (3.6-1) ... 1613s Selecting previously unselected package python-matplotlib-data. 1613s Preparing to unpack .../48-python-matplotlib-data_3.8.3-3ubuntu1_all.deb ... 1613s Unpacking python-matplotlib-data (3.8.3-3ubuntu1) ... 1613s Selecting previously unselected package python3-six. 1613s Preparing to unpack .../49-python3-six_1.16.0-7_all.deb ... 1613s Unpacking python3-six (1.16.0-7) ... 1613s Selecting previously unselected package python3-dateutil. 1613s Preparing to unpack .../50-python3-dateutil_2.9.0-2_all.deb ... 1613s Unpacking python3-dateutil (2.9.0-2) ... 1613s Selecting previously unselected package libopenjp2-7:arm64. 1613s Preparing to unpack .../51-libopenjp2-7_2.5.0-2ubuntu1_arm64.deb ... 1613s Unpacking libopenjp2-7:arm64 (2.5.0-2ubuntu1) ... 1613s Selecting previously unselected package python3-pil:arm64. 1613s Preparing to unpack .../52-python3-pil_10.4.0-1ubuntu1_arm64.deb ... 1613s Unpacking python3-pil:arm64 (10.4.0-1ubuntu1) ... 1613s Selecting previously unselected package python3.12-tk. 1613s Preparing to unpack .../53-python3.12-tk_3.12.7-3_arm64.deb ... 1613s Unpacking python3.12-tk (3.12.7-3) ... 1613s Selecting previously unselected package python3-tk:arm64. 1613s Preparing to unpack .../54-python3-tk_3.12.6-1ubuntu1_arm64.deb ... 1613s Unpacking python3-tk:arm64 (3.12.6-1ubuntu1) ... 1613s Selecting previously unselected package python3-pil.imagetk:arm64. 1613s Preparing to unpack .../55-python3-pil.imagetk_10.4.0-1ubuntu1_arm64.deb ... 1613s Unpacking python3-pil.imagetk:arm64 (10.4.0-1ubuntu1) ... 1613s Selecting previously unselected package python3-numpy. 1613s Preparing to unpack .../56-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 1613s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 1613s Selecting previously unselected package python3-contourpy. 1613s Preparing to unpack .../57-python3-contourpy_1.3.0-2_arm64.deb ... 1613s Unpacking python3-contourpy (1.3.0-2) ... 1613s Selecting previously unselected package python3-cycler. 1613s Preparing to unpack .../58-python3-cycler_0.12.1-1_all.deb ... 1613s Unpacking python3-cycler (0.12.1-1) ... 1613s Selecting previously unselected package python3-brotli. 1613s Preparing to unpack .../59-python3-brotli_1.1.0-2build2_arm64.deb ... 1613s Unpacking python3-brotli (1.1.0-2build2) ... 1613s Selecting previously unselected package python3-decorator. 1614s Preparing to unpack .../60-python3-decorator_5.1.1-5_all.deb ... 1614s Unpacking python3-decorator (5.1.1-5) ... 1614s Selecting previously unselected package python3-scipy. 1614s Preparing to unpack .../61-python3-scipy_1.13.1-5_arm64.deb ... 1614s Unpacking python3-scipy (1.13.1-5) ... 1614s Selecting previously unselected package python3-ufolib2. 1614s Preparing to unpack .../62-python3-ufolib2_0.16.1+dfsg1-1_all.deb ... 1614s Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ... 1614s Selecting previously unselected package python3-mpmath. 1614s Preparing to unpack .../63-python3-mpmath_1.3.0-1_all.deb ... 1614s Unpacking python3-mpmath (1.3.0-1) ... 1614s Selecting previously unselected package python3-sympy. 1614s Preparing to unpack .../64-python3-sympy_1.13.3-1_all.deb ... 1614s Unpacking python3-sympy (1.13.3-1) ... 1614s Selecting previously unselected package python3-tz. 1614s Preparing to unpack .../65-python3-tz_2024.1-2_all.deb ... 1614s Unpacking python3-tz (2024.1-2) ... 1614s Selecting previously unselected package python3-appdirs. 1614s Preparing to unpack .../66-python3-appdirs_1.4.4-4_all.deb ... 1614s Unpacking python3-appdirs (1.4.4-4) ... 1614s Selecting previously unselected package python3-fs. 1614s Preparing to unpack .../67-python3-fs_2.4.16-4_all.deb ... 1614s Unpacking python3-fs (2.4.16-4) ... 1614s Selecting previously unselected package python3-lxml:arm64. 1614s Preparing to unpack .../68-python3-lxml_5.3.0-1_arm64.deb ... 1614s Unpacking python3-lxml:arm64 (5.3.0-1) ... 1614s Selecting previously unselected package python3-lz4. 1614s Preparing to unpack .../69-python3-lz4_4.0.2+dfsg-1build4_arm64.deb ... 1614s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 1614s Selecting previously unselected package python3-unicodedata2. 1614s Preparing to unpack .../70-python3-unicodedata2_15.1.0+ds-1build2_arm64.deb ... 1614s Unpacking python3-unicodedata2 (15.1.0+ds-1build2) ... 1615s Selecting previously unselected package unicode-data. 1615s Preparing to unpack .../71-unicode-data_15.1.0-1_all.deb ... 1615s Unpacking unicode-data (15.1.0-1) ... 1615s Selecting previously unselected package python3-fonttools. 1615s Preparing to unpack .../72-python3-fonttools_4.46.0-1build2_arm64.deb ... 1615s Unpacking python3-fonttools (4.46.0-1build2) ... 1615s Selecting previously unselected package python3-kiwisolver. 1615s Preparing to unpack .../73-python3-kiwisolver_1.4.7-2build1_arm64.deb ... 1615s Unpacking python3-kiwisolver (1.4.7-2build1) ... 1615s Selecting previously unselected package python3-packaging. 1615s Preparing to unpack .../74-python3-packaging_24.1-1_all.deb ... 1615s Unpacking python3-packaging (24.1-1) ... 1615s Selecting previously unselected package python3-matplotlib. 1615s Preparing to unpack .../75-python3-matplotlib_3.8.3-3ubuntu1_arm64.deb ... 1615s Unpacking python3-matplotlib (3.8.3-3ubuntu1) ... 1615s Selecting previously unselected package python3-fastjsonschema. 1615s Preparing to unpack .../76-python3-fastjsonschema_2.20.0-1_all.deb ... 1615s Unpacking python3-fastjsonschema (2.20.0-1) ... 1615s Selecting previously unselected package python3-platformdirs. 1615s Preparing to unpack .../77-python3-platformdirs_4.3.6-1_all.deb ... 1615s Unpacking python3-platformdirs (4.3.6-1) ... 1615s Selecting previously unselected package python3-traitlets. 1615s Preparing to unpack .../78-python3-traitlets_5.14.3+really5.14.3-1_all.deb ... 1615s Unpacking python3-traitlets (5.14.3+really5.14.3-1) ... 1615s Selecting previously unselected package python3-jupyter-core. 1615s Preparing to unpack .../79-python3-jupyter-core_5.7.2-4_all.deb ... 1615s Unpacking python3-jupyter-core (5.7.2-4) ... 1615s Selecting previously unselected package python3-nbformat. 1615s Preparing to unpack .../80-python3-nbformat_5.9.1-1_all.deb ... 1615s Unpacking python3-nbformat (5.9.1-1) ... 1615s Selecting previously unselected package python3-tenacity. 1615s Preparing to unpack .../81-python3-tenacity_8.5.0-0ubuntu1_all.deb ... 1615s Unpacking python3-tenacity (8.5.0-0ubuntu1) ... 1615s Selecting previously unselected package python3-plotly. 1615s Preparing to unpack .../82-python3-plotly_5.20.0+dfsg-1_all.deb ... 1615s Unpacking python3-plotly (5.20.0+dfsg-1) ... 1617s Selecting previously unselected package python3-pyaml-env. 1617s Preparing to unpack .../83-python3-pyaml-env_1.2.1-2_all.deb ... 1617s Unpacking python3-pyaml-env (1.2.1-2) ... 1617s Selecting previously unselected package python3-rich-click. 1617s Preparing to unpack .../84-python3-rich-click_1.6.0-1_all.deb ... 1617s Unpacking python3-rich-click (1.6.0-1) ... 1617s Selecting previously unselected package python3-networkx. 1617s Preparing to unpack .../85-python3-networkx_3.2.1-4ubuntu1_all.deb ... 1617s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 1617s Selecting previously unselected package python3-colormath. 1617s Preparing to unpack .../86-python3-colormath_3.0.0-4_all.deb ... 1617s Unpacking python3-colormath (3.0.0-4) ... 1617s Selecting previously unselected package python3-spectra. 1617s Preparing to unpack .../87-python3-spectra_0.0.11-4_all.deb ... 1617s Unpacking python3-spectra (0.0.11-4) ... 1617s Selecting previously unselected package python3-lzstring. 1617s Preparing to unpack .../88-python3-lzstring_1.0.4-3_all.deb ... 1617s Unpacking python3-lzstring (1.0.4-3) ... 1617s Selecting previously unselected package multiqc. 1617s Preparing to unpack .../89-multiqc_1.21+dfsg-2_all.deb ... 1617s Unpacking multiqc (1.21+dfsg-2) ... 1617s Selecting previously unselected package autopkgtest-satdep. 1618s Preparing to unpack .../90-1-autopkgtest-satdep.deb ... 1618s Unpacking autopkgtest-satdep (0) ... 1618s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 1618s Setting up liblcms2-2:arm64 (2.16-2) ... 1618s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 1618s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 1618s Setting up python3-importlib-metadata (8.5.0-1) ... 1618s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 1618s Setting up python3-colorama (0.4.6-4) ... 1618s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 1618s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1618s Setting up python3-unicodedata2 (15.1.0+ds-1build2) ... 1618s Setting up fonts-lyx (2.4.2.1-1) ... 1618s Setting up python3-tenacity (8.5.0-0ubuntu1) ... 1618s Setting up x11-common (1:7.7+23ubuntu3) ... 1618s Setting up libdeflate0:arm64 (1.22-1) ... 1618s Setting up libqhull-r8.0:arm64 (2020.2-6build1) ... 1618s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ... 1618s Setting up python3-click (8.1.7-2) ... 1619s Setting up python3-networkx (3.2.1-4ubuntu1) ... 1620s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 1620s Setting up python3-platformdirs (4.3.6-1) ... 1620s Setting up python3-tz (2024.1-2) ... 1620s Setting up unicode-data (15.1.0-1) ... 1620s Setting up python3-six (1.16.0-7) ... 1620s Setting up python3-decorator (5.1.1-5) ... 1621s Setting up libblas3:arm64 (3.12.0-3build2) ... 1621s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 1621s Setting up python3-pyaml-env (1.2.1-2) ... 1621s /usr/lib/python3/dist-packages/pyaml_env/parse_config.py:58: SyntaxWarning: invalid escape sequence '\w' 1621s type_tag_pattern = re.compile(f'({type_tag}\w+\s)') 1621s Setting up python3-packaging (24.1-1) ... 1621s Setting up python3-humanfriendly (10.0-6) ... 1621s Setting up python3-brotli (1.1.0-2build2) ... 1621s Setting up python3-cycler (0.12.1-1) ... 1621s Setting up libimagequant0:arm64 (2.18.0-1build1) ... 1621s Setting up fonts-dejavu-mono (2.37-8) ... 1621s Setting up python3-kiwisolver (1.4.7-2build1) ... 1621s Setting up python3-markdown (3.6-1) ... 1622s Setting up libtcl8.6:arm64 (8.6.15+dfsg-2) ... 1622s Setting up fonts-dejavu-core (2.37-8) ... 1622s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 1622s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 1622s Setting up libwebp7:arm64 (1.4.0-0.1) ... 1622s Setting up python3-rich-click (1.6.0-1) ... 1622s Setting up python3-fastjsonschema (2.20.0-1) ... 1622s Setting up python3-traitlets (5.14.3+really5.14.3-1) ... 1622s Setting up libxslt1.1:arm64 (1.1.39-0exp1ubuntu1) ... 1622s Setting up libopenjp2-7:arm64 (2.5.0-2ubuntu1) ... 1622s Setting up libharfbuzz0b:arm64 (10.0.1-1) ... 1622s Setting up python3-dateutil (2.9.0-2) ... 1622s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 1622s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1622s Setting up python3-mpmath (1.3.0-1) ... 1623s Setting up python3-lzstring (1.0.4-3) ... 1623s Setting up python3-humanize (4.11.0-1) ... 1623s Setting up python-matplotlib-data (3.8.3-3ubuntu1) ... 1623s Setting up libwebpmux3:arm64 (1.4.0-0.1) ... 1623s Setting up python3-coloredlogs (15.0.1-1) ... 1623s Setting up python3-appdirs (1.4.4-4) ... 1623s Setting up python3-jupyter-core (5.7.2-4) ... 1624s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 1624s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 1624s Setting up python3-sympy (1.13.3-1) ... 1630s Setting up liblapack3:arm64 (3.12.0-3build2) ... 1630s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 1630s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 1630s Setting up libwebpdemux2:arm64 (1.4.0-0.1) ... 1630s Setting up python3-nbformat (5.9.1-1) ... 1631s Setting up python3-fs (2.4.16-4) ... 1631s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 1631s Setting up libjs-jquery-metadata (12-4) ... 1631s Setting up libraqm0:arm64 (0.10.1-1build1) ... 1631s Setting up python3-plotly (5.20.0+dfsg-1) ... 1637s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 1639s Setting up python3-colormath (3.0.0-4) ... 1639s /usr/lib/python3/dist-packages/colormath/chromatic_adaptation.py:85: SyntaxWarning: invalid escape sequence '\*' 1639s logger.debug(" \* Applying adaptation matrix: %s", adaptation) 1639s /usr/lib/python3/dist-packages/colormath/color_appearance_models.py:684: SyntaxWarning: invalid escape sequence '\s' 1639s """ 1639s /usr/lib/python3/dist-packages/colormath/color_appearance_models.py:788: SyntaxWarning: invalid escape sequence '\s' 1639s """ 1639s /usr/lib/python3/dist-packages/colormath/color_conversions.py:40: SyntaxWarning: invalid escape sequence '\*' 1639s logger.debug(" \* Applying RGB conversion matrix: %s->%s", 1639s /usr/lib/python3/dist-packages/colormath/color_conversions.py:488: SyntaxWarning: invalid escape sequence '\-' 1639s logger.debug(" \- Target RGB space: %s", target_rgb) 1639s /usr/lib/python3/dist-packages/colormath/color_conversions.py:490: SyntaxWarning: invalid escape sequence '\-' 1639s logger.debug(" \- Target native illuminant: %s", target_illum) 1639s /usr/lib/python3/dist-packages/colormath/color_conversions.py:491: SyntaxWarning: invalid escape sequence '\-' 1639s logger.debug(" \- XYZ color's illuminant: %s", cobj.illuminant) 1639s /usr/lib/python3/dist-packages/colormath/color_conversions.py:497: SyntaxWarning: invalid escape sequence '\*' 1639s logger.debug(" \* Applying transformation from %s to %s ", 1639s /usr/lib/python3/dist-packages/colormath/color_conversions.py:503: SyntaxWarning: invalid escape sequence '\*' 1639s logger.debug(" \* New values: %.3f, %.3f, %.3f", 1639s /usr/lib/python3/dist-packages/colormath/color_objects.py:452: SyntaxWarning: invalid escape sequence '\-' 1639s logger.debug(" \- Original illuminant: %s", self.illuminant) 1639s /usr/lib/python3/dist-packages/colormath/color_objects.py:453: SyntaxWarning: invalid escape sequence '\-' 1639s logger.debug(" \- Target illuminant: %s", target_illuminant) 1639s /usr/lib/python3/dist-packages/colormath/color_objects.py:459: SyntaxWarning: invalid escape sequence '\*' 1639s logger.debug(" \* Applying transformation from %s to %s ", 1639s Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 1639s Setting up python3-lxml:arm64 (5.3.0-1) ... 1639s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 1639s Setting up python3-contourpy (1.3.0-2) ... 1639s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 1639s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 1639s Setting up libxft2:arm64 (2.3.6-1build1) ... 1639s Setting up python3-scipy (1.13.1-5) ... 1643s Setting up python3-spectra (0.0.11-4) ... 1643s Setting up libtk8.6:arm64 (8.6.15-1) ... 1643s Setting up python3.12-tk (3.12.7-3) ... 1643s Setting up python3-pil:arm64 (10.4.0-1ubuntu1) ... 1643s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 1643s Setting up blt (2.5.3+dfsg-7build1) ... 1643s Setting up python3-tk:arm64 (3.12.6-1ubuntu1) ... 1644s Setting up python3-pil.imagetk:arm64 (10.4.0-1ubuntu1) ... 1644s Setting up python3-fonttools (4.46.0-1build2) ... 1645s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... 1645s Setting up python3-matplotlib (3.8.3-3ubuntu1) ... 1646s Setting up multiqc (1.21+dfsg-2) ... 1647s Setting up autopkgtest-satdep (0) ... 1647s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1647s Processing triggers for man-db (2.13.0-1) ... 1653s (Reading database ... 105382 files and directories currently installed.) 1653s Removing autopkgtest-satdep (0) ... 1654s autopkgtest [02:34:52]: test run-unit-test: [----------------------- 1655s 1655s /// MultiQC 🔍 | v1.21 1655s 1655s Usage: multiqc [OPTIONS] [ANALYSIS DIRECTORY] 1655s 1655s MultiQC aggregates results from bioinformatics analyses across many samples 1655s into a single report. 1655s It searches a given directory for analysis logs and compiles a HTML report. 1655s It's a general use tool, perfect for summarising the output from numerous 1655s bioinformatics tools. 1655s To run, supply with one or more directory to scan for analysis results. For 1655s example, to run in the current working directory, use 'multiqc .' 1655s 1655s ╭─ Main options ───────────────────────────────────────────────────────────────╮ 1655s │ --force -f Overwrite any existing reports │ 1655s │ --config -c Specific config file to load, after those in MultiQC │ 1655s │ dir / home dir / working dir. │ 1655s │ (PATH) │ 1655s │ --cl-config Specify MultiQC config YAML on the command line │ 1655s │ (TEXT) │ 1655s │ --filename -n Report filename. Use 'stdout' to print to standard │ 1655s │ out. │ 1655s │ (TEXT) │ 1655s │ --outdir -o Create report in the specified output directory. │ 1655s │ (TEXT) │ 1655s │ --ignore -x Ignore analysis files (GLOB EXPRESSION) │ 1655s │ --ignore-samples Ignore sample names (GLOB EXPRESSION) │ 1655s │ --ignore-symlinks Ignore symlinked directories and files │ 1655s │ --file-list -l Supply a file containing a list of file paths to be │ 1655s │ searched, one per row │ 1655s ╰──────────────────────────────────────────────────────────────────────────────╯ 1655s ╭─ Choosing modules to run ────────────────────────────────────────────────────╮ 1655s │ --module -m Use only this module. Can specify multiple times. │ 1655s │ (MODULE NAME) │ 1655s │ --exclude -e Do not use this module. Can specify multiple times. │ 1655s │ (MODULE NAME) │ 1655s ╰──────────────────────────────────────────────────────────────────────────────╯ 1655s ╭─ Sample handling ────────────────────────────────────────────────────────────╮ 1655s │ --dirs -d Prepend directory to sample names │ 1655s │ --dirs-depth -dd Prepend n directories to sample names. Negative number │ 1655s │ to take from start of path. │ 1655s │ (INTEGER) │ 1655s │ --fullnames -s Do not clean the sample names (leave as full file │ 1655s │ name) │ 1655s │ --fn_as_s_name Use the log filename as the sample name │ 1655s │ --replace-names TSV file to rename sample names during report │ 1655s │ generation │ 1655s │ (PATH) │ 1655s ╰──────────────────────────────────────────────────────────────────────────────╯ 1655s ╭─ Report customisation ───────────────────────────────────────────────────────╮ 1655s │ --title -i Report title. Printed as page header, used for │ 1655s │ filename if not otherwise specified. │ 1655s │ (TEXT) │ 1655s │ --comment -b Custom comment, will be printed at the top of the │ 1655s │ report. │ 1655s │ (TEXT) │ 1655s │ --template -t Report template to use. │ 1655s │ (default|gathered|geo|highcharts|sections|simple) │ 1655s │ --sample-names TSV file containing alternative sample names for │ 1655s │ renaming buttons in the report │ 1655s │ (PATH) │ 1655s │ --sample-filters TSV file containing show/hide patterns for the report │ 1655s │ (PATH) │ 1655s │ --custom-css-file Custom CSS file to add to the final report (PATH) │ 1655s ╰──────────────────────────────────────────────────────────────────────────────╯ 1655s ╭─ Output files ───────────────────────────────────────────────────────────────╮ 1655s │ --flat -fp Use only flat plots (static images) │ 1655s │ --interactive -ip Use only interactive plots (in-browser Javascript) │ 1655s │ --export -p Export plots as static images in addition to the report │ 1655s │ --data-dir Force the parsed data directory to be created. │ 1655s │ --no-data-dir Prevent the parsed data directory from being created. │ 1655s │ --data-format -k Output parsed data in a different format. │ 1655s │ (tsv|csv|json|yaml) │ 1655s │ --zip-data-dir -z Compress the data directory. │ 1655s │ --no-report Do not generate a report, only export data and plots │ 1655s │ --pdf Creates PDF report with the 'simple' template. Requires │ 1655s │ Pandoc to be installed. │ 1655s ╰──────────────────────────────────────────────────────────────────────────────╯ 1655s ╭─ MultiQC behaviour ──────────────────────────────────────────────────────────╮ 1655s │ --verbose -v Increase output verbosity. (INTEGER RANGE) │ 1655s │ --quiet -q Only show log warnings │ 1655s │ --strict Don't catch exceptions, run additional code checks │ 1655s │ to help development. │ 1655s │ --development,--dev Development mode. Do not compress and minimise JS, │ 1655s │ export uncompressed plot data │ 1655s │ --require-logs Require all explicitly requested modules to have │ 1655s │ log files. If not, MultiQC will exit with an error. │ 1655s │ --profile-runtime Add analysis of how long MultiQC takes to run to │ 1655s │ the report │ 1655s │ --no-megaqc-upload Don't upload generated report to MegaQC, even if │ 1655s │ MegaQC options are found │ 1655s │ --no-ansi Disable coloured log output │ 1655s │ --version Show the version and exit. │ 1655s │ --help -h Show this message and exit. │ 1655s ╰──────────────────────────────────────────────────────────────────────────────╯ 1655s 1655s See http://multiqc.info for more details. 1655s 1655s FIXME: The test data should be delivered in a separate binary package once freeze is over 1655s 1655s /// MultiQC 🔍 | v1.21 1655s 1656s | multiqc | MultiQC Version v1.25.1 now available! 1656s | multiqc | Search path : /tmp/autopkgtest.UeVRbp/autopkgtest_tmp/data 1656s | searching | ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 100% 121/121 1656s | feature_counts | Found 8 reports 1656s | star | Found 8 reports 1656s | cutadapt | Found 16 reports 1656s | fastqc | Found 32 reports 1657s | multiqc | Report : multiqc_report.html 1657s | multiqc | Data : multiqc_data 1657s | multiqc | Could not include file 'assets/js/packages/jszip.min.js': [Errno 2] No such file or directory: '/tmp/tmpi_gf7nc5/assets/js/packages/jszip.min.js' 1657s | multiqc | Could not include file 'assets/js/packages/plotly-2.27.0.min.js': [Errno 2] No such file or directory: '/tmp/tmpi_gf7nc5/assets/js/packages/plotly-2.27.0.min.js' 1657s | multiqc | MultiQC complete 1658s -e 1658s PASS 1658s 1658s autopkgtest [02:34:56]: test run-unit-test: -----------------------] 1658s autopkgtest [02:34:56]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 1658s run-unit-test PASS 1659s autopkgtest [02:34:57]: @@@@@@@@@@@@@@@@@@@@ summary 1659s run-unit-test PASS 1671s nova [W] Skipping flock in bos03-arm64 1671s Creating nova instance adt-plucky-arm64-multiqc-20241115-020718-juju-7f2275-prod-proposed-migration-environment-20-14578363-bdb5-4112-8105-53e9f72becf1 from image adt/ubuntu-plucky-arm64-server-20241114.img (UUID 4472f5f7-859f-4441-9e8e-9550fb35f210)...