1s autopkgtest [19:03:42]: starting date and time: 2024-11-01 19:03:42+0000 1s autopkgtest [19:03:42]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 1s autopkgtest [19:03:42]: host juju-7f2275-prod-proposed-migration-environment-14; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.nisst3xp/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:rhino --apt-upgrade htsjdk --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=rhino/1.7.15-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-14@bos03-arm64-22.secgroup --name adt-plucky-arm64-htsjdk-20241101-190341-juju-7f2275-prod-proposed-migration-environment-14-9025d7f8-e81a-4e21-a7b1-5c8145caa910 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-14 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 71s autopkgtest [19:04:52]: testbed dpkg architecture: arm64 71s autopkgtest [19:04:52]: testbed apt version: 2.9.8 71s autopkgtest [19:04:52]: @@@@@@@@@@@@@@@@@@@@ test bed setup 72s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 72s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 73s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [183 kB] 73s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [44.0 kB] 73s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2775 kB] 73s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [241 kB] 73s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 73s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [2023 kB] 73s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [36.5 kB] 74s Fetched 5433 kB in 1s (3761 kB/s) 74s Reading package lists... 77s Reading package lists... 77s Building dependency tree... 77s Reading state information... 77s Calculating upgrade... 78s The following packages will be upgraded: 78s libevdev2 libftdi1-2 libinih1 nano python3-lazr.uri 79s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 79s Need to get 374 kB of archives. 79s After this operation, 17.4 kB of additional disk space will be used. 79s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libevdev2 arm64 1.13.3+dfsg-1 [36.0 kB] 79s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 nano arm64 8.2-1 [289 kB] 79s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libftdi1-2 arm64 1.5-7 [28.4 kB] 79s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libinih1 arm64 58-1ubuntu1 [7412 B] 79s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lazr.uri all 1.0.6-4 [13.6 kB] 79s Fetched 374 kB in 0s (892 kB/s) 79s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 79s Preparing to unpack .../libevdev2_1.13.3+dfsg-1_arm64.deb ... 79s Unpacking libevdev2:arm64 (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 79s Preparing to unpack .../archives/nano_8.2-1_arm64.deb ... 79s Unpacking nano (8.2-1) over (8.1-1) ... 79s Preparing to unpack .../libftdi1-2_1.5-7_arm64.deb ... 79s Unpacking libftdi1-2:arm64 (1.5-7) over (1.5-6build5) ... 79s Preparing to unpack .../libinih1_58-1ubuntu1_arm64.deb ... 79s Unpacking libinih1:arm64 (58-1ubuntu1) over (55-1ubuntu2) ... 79s Preparing to unpack .../python3-lazr.uri_1.0.6-4_all.deb ... 80s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 80s Setting up libinih1:arm64 (58-1ubuntu1) ... 80s Setting up python3-lazr.uri (1.0.6-4) ... 80s Setting up libftdi1-2:arm64 (1.5-7) ... 80s Setting up nano (8.2-1) ... 80s Setting up libevdev2:arm64 (1.13.3+dfsg-1) ... 80s Processing triggers for man-db (2.12.1-3) ... 81s Processing triggers for install-info (7.1.1-1) ... 81s Processing triggers for libc-bin (2.40-1ubuntu3) ... 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 82s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 82s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 82s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 82s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 83s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 84s Reading package lists... 84s Reading package lists... 84s Building dependency tree... 84s Reading state information... 84s Calculating upgrade... 85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 85s Reading package lists... 85s Building dependency tree... 85s Reading state information... 86s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 88s autopkgtest [19:05:09]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 89s autopkgtest [19:05:10]: @@@@@@@@@@@@@@@@@@@@ apt-source htsjdk 93s Get:1 http://ftpmaster.internal/ubuntu plucky/universe htsjdk 4.1.0+dfsg-2 (dsc) [2649 B] 93s Get:2 http://ftpmaster.internal/ubuntu plucky/universe htsjdk 4.1.0+dfsg-2 (tar) [46.9 MB] 93s Get:3 http://ftpmaster.internal/ubuntu plucky/universe htsjdk 4.1.0+dfsg-2 (diff) [39.3 kB] 93s gpgv: Signature made Wed May 15 21:27:25 2024 UTC 93s gpgv: using RSA key 33CB284313E90BD27DCB4523600316A6DC277476 93s gpgv: Can't check signature: No public key 93s dpkg-source: warning: cannot verify inline signature for ./htsjdk_4.1.0+dfsg-2.dsc: no acceptable signature found 95s autopkgtest [19:05:16]: testing package htsjdk version 4.1.0+dfsg-2 96s autopkgtest [19:05:17]: build not needed 102s autopkgtest [19:05:23]: test beagle-run-sample-analysis: preparing testbed 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 105s Starting pkgProblemResolver with broken count: 0 105s Starting 2 pkgProblemResolver with broken count: 0 105s Done 105s The following additional packages will be installed: 105s adwaita-icon-theme at-spi2-common beagle beagle-doc ca-certificates-java 105s dconf-gsettings-backend dconf-service default-jre default-jre-headless 105s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 105s gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme java-common 105s libapache-pom-java libasound2-data libasound2t64 libatk-bridge2.0-0t64 105s libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data 105s libavahi-common3 libcairo-gobject2 libcairo2 libcolord2 105s libcommons-compress-java libcommons-jexl2-java libcommons-logging-java 105s libcommons-parent-java libcups2t64 libdatrie1 libdconf1 libdeflate0 105s libdrm-amdgpu1 libdrm-radeon1 libepoxy0 libfontconfig1 libgbm1 105s libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri 105s libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgtk-3-0t64 105s libgtk-3-common libharfbuzz0b libhtsjdk-java libjbig0 libjpeg-turbo8 105s libjpeg8 liblcms2-2 liblerc4 libmbedcrypto7t64 libmbedtls14t64 106s libmbedx509-1t64 libmjson-java libncbi-ngs3 libncbi-vdb3 libngs-java 106s libngs-jni libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 106s libpixman-1-0 librhino-java libsharpyuv0 libsnappy-java libsnappy-jni 106s libsnappy1v5 libthai-data libthai0 libtiff6 libvulkan1 libwayland-client0 106s libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libx11-xcb1 106s libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 106s libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 106s libxcursor1 libxdamage1 libxfixes3 libxi6 libxinerama1 libxrandr2 106s libxrender1 libxshmfence1 libxtst6 libxxf86vm1 mesa-libgallium ncbi-vdb-data 106s openjdk-21-jre openjdk-21-jre-headless ubuntu-mono x11-common 106s Suggested packages: 106s alsa-utils libasound2-plugins colord libasm-java libxz-java 106s libavalon-framework-java libexcalibur-logkit-java liblog4j1.2-java 106s cups-common gvfs picard-tools liblcms2-utils libngs-java-doc pcscd rhino 106s libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho 106s fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic 106s Recommended packages: 106s librsvg2-common alsa-ucm-conf alsa-topology-conf at-spi2-core 106s libgdk-pixbuf2.0-bin libgl1-amber-dri libgtk-3-bin mesa-vulkan-drivers 106s | vulkan-icd libatk-wrapper-java-jni fonts-dejavu-extra 106s The following NEW packages will be installed: 106s adwaita-icon-theme at-spi2-common autopkgtest-satdep beagle beagle-doc 106s ca-certificates-java dconf-gsettings-backend dconf-service default-jre 106s default-jre-headless fontconfig fontconfig-config fonts-dejavu-core 106s fonts-dejavu-mono gtk-update-icon-cache hicolor-icon-theme 106s humanity-icon-theme java-common libapache-pom-java libasound2-data 106s libasound2t64 libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 106s libavahi-client3 libavahi-common-data libavahi-common3 libcairo-gobject2 106s libcairo2 libcolord2 libcommons-compress-java libcommons-jexl2-java 106s libcommons-logging-java libcommons-parent-java libcups2t64 libdatrie1 106s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 libepoxy0 libfontconfig1 106s libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 106s libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 106s libgtk-3-0t64 libgtk-3-common libharfbuzz0b libhtsjdk-java libjbig0 106s libjpeg-turbo8 libjpeg8 liblcms2-2 liblerc4 libmbedcrypto7t64 106s libmbedtls14t64 libmbedx509-1t64 libmjson-java libncbi-ngs3 libncbi-vdb3 106s libngs-java libngs-jni libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 106s libpcsclite1 libpixman-1-0 librhino-java libsharpyuv0 libsnappy-java 106s libsnappy-jni libsnappy1v5 libthai-data libthai0 libtiff6 libvulkan1 106s libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 106s libwebp7 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 106s libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 106s libxcomposite1 libxcursor1 libxdamage1 libxfixes3 libxi6 libxinerama1 106s libxrandr2 libxrender1 libxshmfence1 libxtst6 libxxf86vm1 mesa-libgallium 106s ncbi-vdb-data openjdk-21-jre openjdk-21-jre-headless ubuntu-mono x11-common 106s 0 upgraded, 116 newly installed, 0 to remove and 0 not upgraded. 106s Need to get 76.5 MB/76.5 MB of archives. 106s After this operation, 347 MB of additional disk space will be used. 106s Get:1 /tmp/autopkgtest.d7OWAi/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [708 B] 106s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 106s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 106s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 106s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.21-1 [46.2 kB] 106s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 106s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 106s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 106s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 106s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 106s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1 [145 kB] 106s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 gtk-update-icon-cache arm64 4.16.2+ds-2 [51.1 kB] 106s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 hicolor-icon-theme all 0.18-1 [13.5 kB] 106s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 humanity-icon-theme all 0.6.16 [1282 kB] 106s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 ubuntu-mono all 24.04-0ubuntu1 [151 kB] 106s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 adwaita-icon-theme all 47.0-1 [525 kB] 106s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 at-spi2-common all 2.54.0-1 [8774 B] 106s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 ca-certificates-java all 20240118 [11.6 kB] 106s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 java-common all 0.76 [6852 B] 106s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.14-2build1 [161 kB] 106s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcsclite1 arm64 2.3.0-1 [24.4 kB] 106s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre-headless arm64 21.0.5+11-1 [45.7 MB] 108s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre-headless arm64 2:1.21-76 [3176 B] 108s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [55.0 kB] 108s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 108s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [80.2 kB] 108s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [66.6 kB] 108s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 108s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 108s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 108s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 108s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.42.2-1build1 [204 kB] 108s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 108s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 108s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 108s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 108s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo-gobject2 arm64 1.18.2-2 [127 kB] 108s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolord2 arm64 1.4.7-1build2 [149 kB] 108s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common-data arm64 0.8-13ubuntu6 [29.6 kB] 108s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common3 arm64 0.8-13ubuntu6 [23.3 kB] 108s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-client3 arm64 0.8-13ubuntu6 [27.2 kB] 108s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libcups2t64 arm64 2.4.10-1ubuntu2 [271 kB] 108s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libepoxy0 arm64 1.5.10-1build1 [240 kB] 108s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 108s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 9.0.0-1 [486 kB] 108s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 108s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 108s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 108s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 108s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-2 [233 kB] 108s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-2 [48.8 kB] 108s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-2 [27.5 kB] 108s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB] 108s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-cursor0 arm64 1.23.0-1 [10.6 kB] 108s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-egl1 arm64 1.23.0-1 [5636 B] 108s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcomposite1 arm64 1:0.4.5-1build3 [6336 B] 108s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB] 108s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcursor1 arm64 1:1.2.2-1 [21.2 kB] 108s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libxdamage1 arm64 1:1.1.6-1build1 [6236 B] 108s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libxinerama1 arm64 2:1.1.4-3build1 [6394 B] 108s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrandr2 arm64 2:1.5.4-1 [19.6 kB] 108s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libdconf1 arm64 0.40.0-4build2 [39.8 kB] 108s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-service arm64 0.40.0-4build2 [26.9 kB] 108s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-gsettings-backend arm64 0.40.0-4build2 [22.0 kB] 108s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-common all 3.24.43-3ubuntu2 [1202 kB] 108s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-0t64 arm64 3.24.43-3ubuntu2 [2898 kB] 109s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB] 109s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB] 109s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.7-1build1 [7870 B] 109s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B] 109s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B] 109s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB] 109s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B] 109s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB] 109s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B] 109s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB] 109s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B] 109s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B] 109s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.122-1 [20.9 kB] 109s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.122-1 [20.8 kB] 109s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB] 109s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.290.0-1 [153 kB] 109s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB] 109s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB] 109s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB] 109s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB] 109s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB] 109s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB] 109s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2-data all 1.2.12-1 [21.0 kB] 109s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2t64 arm64 1.2.12-1 [384 kB] 109s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 109s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 109s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libxtst6 arm64 2:1.2.3-1.1build1 [13.0 kB] 109s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre arm64 21.0.5+11-1 [221 kB] 109s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre arm64 2:1.21-76 [918 B] 109s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapache-pom-java all 33-2 [5874 B] 109s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-parent-java all 56-1 [10.7 kB] 109s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-compress-java all 1.25.0-1 [612 kB] 109s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 109s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-jexl2-java all 2.1.1-6 [250 kB] 109s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmjson-java all 1.4.0-3 [60.4 kB] 109s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedcrypto7t64 arm64 2.28.8-1 [209 kB] 109s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedx509-1t64 arm64 2.28.8-1 [47.2 kB] 109s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedtls14t64 arm64 2.28.8-1 [82.2 kB] 110s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 ncbi-vdb-data all 3.0.2+dfsg-2build2 [67.5 kB] 110s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-vdb3 arm64 3.0.2+dfsg-2build2 [1143 kB] 110s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-ngs3 arm64 3.0.3+dfsg-9ubuntu1 [145 kB] 110s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-jni arm64 3.0.3+dfsg-9ubuntu1 [4844 B] 110s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-java arm64 3.0.3+dfsg-9ubuntu1 [91.1 kB] 110s Get:110 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 librhino-java all 1.7.15-1 [1354 kB] 110s Get:111 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 110s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-jni arm64 1.1.10.5-2 [6618 B] 110s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-java all 1.1.10.5-2 [83.7 kB] 110s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtsjdk-java all 4.1.0+dfsg-2 [1823 kB] 110s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 beagle all 220722-1 [356 kB] 110s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 beagle-doc all 220722-1 [1655 kB] 111s Fetched 76.5 MB in 4s (17.1 MB/s) 111s Selecting previously unselected package libgdk-pixbuf2.0-common. 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 111s Preparing to unpack .../000-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 111s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 111s Selecting previously unselected package libjpeg-turbo8:arm64. 111s Preparing to unpack .../001-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 111s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 111s Selecting previously unselected package libjpeg8:arm64. 111s Preparing to unpack .../002-libjpeg8_8c-2ubuntu11_arm64.deb ... 111s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 111s Selecting previously unselected package libdeflate0:arm64. 111s Preparing to unpack .../003-libdeflate0_1.21-1_arm64.deb ... 111s Unpacking libdeflate0:arm64 (1.21-1) ... 111s Selecting previously unselected package libjbig0:arm64. 111s Preparing to unpack .../004-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 111s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 111s Selecting previously unselected package liblerc4:arm64. 111s Preparing to unpack .../005-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 111s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 111s Selecting previously unselected package libsharpyuv0:arm64. 111s Preparing to unpack .../006-libsharpyuv0_1.4.0-0.1_arm64.deb ... 111s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 111s Selecting previously unselected package libwebp7:arm64. 111s Preparing to unpack .../007-libwebp7_1.4.0-0.1_arm64.deb ... 111s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 111s Selecting previously unselected package libtiff6:arm64. 111s Preparing to unpack .../008-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 111s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 111s Selecting previously unselected package libgdk-pixbuf-2.0-0:arm64. 111s Preparing to unpack .../009-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_arm64.deb ... 111s Unpacking libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 111s Selecting previously unselected package gtk-update-icon-cache. 111s Preparing to unpack .../010-gtk-update-icon-cache_4.16.2+ds-2_arm64.deb ... 111s No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. 111s No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. 111s Unpacking gtk-update-icon-cache (4.16.2+ds-2) ... 111s Selecting previously unselected package hicolor-icon-theme. 111s Preparing to unpack .../011-hicolor-icon-theme_0.18-1_all.deb ... 111s Unpacking hicolor-icon-theme (0.18-1) ... 111s Selecting previously unselected package humanity-icon-theme. 111s Preparing to unpack .../012-humanity-icon-theme_0.6.16_all.deb ... 111s Unpacking humanity-icon-theme (0.6.16) ... 112s Selecting previously unselected package ubuntu-mono. 112s Preparing to unpack .../013-ubuntu-mono_24.04-0ubuntu1_all.deb ... 112s Unpacking ubuntu-mono (24.04-0ubuntu1) ... 112s Selecting previously unselected package adwaita-icon-theme. 112s Preparing to unpack .../014-adwaita-icon-theme_47.0-1_all.deb ... 112s Unpacking adwaita-icon-theme (47.0-1) ... 112s Selecting previously unselected package at-spi2-common. 112s Preparing to unpack .../015-at-spi2-common_2.54.0-1_all.deb ... 112s Unpacking at-spi2-common (2.54.0-1) ... 112s Selecting previously unselected package ca-certificates-java. 112s Preparing to unpack .../016-ca-certificates-java_20240118_all.deb ... 112s Unpacking ca-certificates-java (20240118) ... 112s Selecting previously unselected package java-common. 112s Preparing to unpack .../017-java-common_0.76_all.deb ... 112s Unpacking java-common (0.76) ... 112s Selecting previously unselected package liblcms2-2:arm64. 112s Preparing to unpack .../018-liblcms2-2_2.14-2build1_arm64.deb ... 112s Unpacking liblcms2-2:arm64 (2.14-2build1) ... 112s Selecting previously unselected package libpcsclite1:arm64. 112s Preparing to unpack .../019-libpcsclite1_2.3.0-1_arm64.deb ... 112s Unpacking libpcsclite1:arm64 (2.3.0-1) ... 112s Selecting previously unselected package openjdk-21-jre-headless:arm64. 113s Preparing to unpack .../020-openjdk-21-jre-headless_21.0.5+11-1_arm64.deb ... 113s Unpacking openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 114s Selecting previously unselected package default-jre-headless. 114s Preparing to unpack .../021-default-jre-headless_2%3a1.21-76_arm64.deb ... 114s Unpacking default-jre-headless (2:1.21-76) ... 114s Selecting previously unselected package libatk1.0-0t64:arm64. 114s Preparing to unpack .../022-libatk1.0-0t64_2.54.0-1_arm64.deb ... 114s Unpacking libatk1.0-0t64:arm64 (2.54.0-1) ... 114s Selecting previously unselected package libxi6:arm64. 114s Preparing to unpack .../023-libxi6_2%3a1.8.2-1_arm64.deb ... 114s Unpacking libxi6:arm64 (2:1.8.2-1) ... 114s Selecting previously unselected package libatspi2.0-0t64:arm64. 114s Preparing to unpack .../024-libatspi2.0-0t64_2.54.0-1_arm64.deb ... 114s Unpacking libatspi2.0-0t64:arm64 (2.54.0-1) ... 114s Selecting previously unselected package libatk-bridge2.0-0t64:arm64. 114s Preparing to unpack .../025-libatk-bridge2.0-0t64_2.54.0-1_arm64.deb ... 114s Unpacking libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 114s Selecting previously unselected package fonts-dejavu-mono. 114s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ... 114s Unpacking fonts-dejavu-mono (2.37-8) ... 114s Selecting previously unselected package fonts-dejavu-core. 114s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ... 114s Unpacking fonts-dejavu-core (2.37-8) ... 114s Selecting previously unselected package fontconfig-config. 114s Preparing to unpack .../028-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 114s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 114s Selecting previously unselected package libfontconfig1:arm64. 114s Preparing to unpack .../029-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 114s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 114s Selecting previously unselected package libpixman-1-0:arm64. 115s Preparing to unpack .../030-libpixman-1-0_0.42.2-1build1_arm64.deb ... 115s Unpacking libpixman-1-0:arm64 (0.42.2-1build1) ... 115s Selecting previously unselected package libxcb-render0:arm64. 115s Preparing to unpack .../031-libxcb-render0_1.17.0-2_arm64.deb ... 115s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 115s Selecting previously unselected package libxcb-shm0:arm64. 115s Preparing to unpack .../032-libxcb-shm0_1.17.0-2_arm64.deb ... 115s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 115s Selecting previously unselected package libxrender1:arm64. 115s Preparing to unpack .../033-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 115s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 115s Selecting previously unselected package libcairo2:arm64. 115s Preparing to unpack .../034-libcairo2_1.18.2-2_arm64.deb ... 115s Unpacking libcairo2:arm64 (1.18.2-2) ... 115s Selecting previously unselected package libcairo-gobject2:arm64. 115s Preparing to unpack .../035-libcairo-gobject2_1.18.2-2_arm64.deb ... 115s Unpacking libcairo-gobject2:arm64 (1.18.2-2) ... 115s Selecting previously unselected package libcolord2:arm64. 115s Preparing to unpack .../036-libcolord2_1.4.7-1build2_arm64.deb ... 115s Unpacking libcolord2:arm64 (1.4.7-1build2) ... 115s Selecting previously unselected package libavahi-common-data:arm64. 115s Preparing to unpack .../037-libavahi-common-data_0.8-13ubuntu6_arm64.deb ... 115s Unpacking libavahi-common-data:arm64 (0.8-13ubuntu6) ... 115s Selecting previously unselected package libavahi-common3:arm64. 115s Preparing to unpack .../038-libavahi-common3_0.8-13ubuntu6_arm64.deb ... 115s Unpacking libavahi-common3:arm64 (0.8-13ubuntu6) ... 115s Selecting previously unselected package libavahi-client3:arm64. 115s Preparing to unpack .../039-libavahi-client3_0.8-13ubuntu6_arm64.deb ... 115s Unpacking libavahi-client3:arm64 (0.8-13ubuntu6) ... 115s Selecting previously unselected package libcups2t64:arm64. 115s Preparing to unpack .../040-libcups2t64_2.4.10-1ubuntu2_arm64.deb ... 115s Unpacking libcups2t64:arm64 (2.4.10-1ubuntu2) ... 115s Selecting previously unselected package libepoxy0:arm64. 115s Preparing to unpack .../041-libepoxy0_1.5.10-1build1_arm64.deb ... 115s Unpacking libepoxy0:arm64 (1.5.10-1build1) ... 115s Selecting previously unselected package libgraphite2-3:arm64. 115s Preparing to unpack .../042-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 115s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 115s Selecting previously unselected package libharfbuzz0b:arm64. 115s Preparing to unpack .../043-libharfbuzz0b_9.0.0-1_arm64.deb ... 115s Unpacking libharfbuzz0b:arm64 (9.0.0-1) ... 115s Selecting previously unselected package fontconfig. 115s Preparing to unpack .../044-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 115s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 115s Selecting previously unselected package libthai-data. 115s Preparing to unpack .../045-libthai-data_0.1.29-2build1_all.deb ... 115s Unpacking libthai-data (0.1.29-2build1) ... 115s Selecting previously unselected package libdatrie1:arm64. 115s Preparing to unpack .../046-libdatrie1_0.2.13-3build1_arm64.deb ... 115s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 115s Selecting previously unselected package libthai0:arm64. 115s Preparing to unpack .../047-libthai0_0.1.29-2build1_arm64.deb ... 115s Unpacking libthai0:arm64 (0.1.29-2build1) ... 115s Selecting previously unselected package libpango-1.0-0:arm64. 115s Preparing to unpack .../048-libpango-1.0-0_1.54.0+ds-2_arm64.deb ... 115s Unpacking libpango-1.0-0:arm64 (1.54.0+ds-2) ... 115s Selecting previously unselected package libpangoft2-1.0-0:arm64. 115s Preparing to unpack .../049-libpangoft2-1.0-0_1.54.0+ds-2_arm64.deb ... 115s Unpacking libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 115s Selecting previously unselected package libpangocairo-1.0-0:arm64. 116s Preparing to unpack .../050-libpangocairo-1.0-0_1.54.0+ds-2_arm64.deb ... 116s Unpacking libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 116s Selecting previously unselected package libwayland-client0:arm64. 116s Preparing to unpack .../051-libwayland-client0_1.23.0-1_arm64.deb ... 116s Unpacking libwayland-client0:arm64 (1.23.0-1) ... 116s Selecting previously unselected package libwayland-cursor0:arm64. 116s Preparing to unpack .../052-libwayland-cursor0_1.23.0-1_arm64.deb ... 116s Unpacking libwayland-cursor0:arm64 (1.23.0-1) ... 116s Selecting previously unselected package libwayland-egl1:arm64. 116s Preparing to unpack .../053-libwayland-egl1_1.23.0-1_arm64.deb ... 116s Unpacking libwayland-egl1:arm64 (1.23.0-1) ... 116s Selecting previously unselected package libxcomposite1:arm64. 116s Preparing to unpack .../054-libxcomposite1_1%3a0.4.5-1build3_arm64.deb ... 116s Unpacking libxcomposite1:arm64 (1:0.4.5-1build3) ... 116s Selecting previously unselected package libxfixes3:arm64. 116s Preparing to unpack .../055-libxfixes3_1%3a6.0.0-2build1_arm64.deb ... 116s Unpacking libxfixes3:arm64 (1:6.0.0-2build1) ... 116s Selecting previously unselected package libxcursor1:arm64. 116s Preparing to unpack .../056-libxcursor1_1%3a1.2.2-1_arm64.deb ... 116s Unpacking libxcursor1:arm64 (1:1.2.2-1) ... 116s Selecting previously unselected package libxdamage1:arm64. 116s Preparing to unpack .../057-libxdamage1_1%3a1.1.6-1build1_arm64.deb ... 116s Unpacking libxdamage1:arm64 (1:1.1.6-1build1) ... 116s Selecting previously unselected package libxinerama1:arm64. 116s Preparing to unpack .../058-libxinerama1_2%3a1.1.4-3build1_arm64.deb ... 116s Unpacking libxinerama1:arm64 (2:1.1.4-3build1) ... 116s Selecting previously unselected package libxrandr2:arm64. 116s Preparing to unpack .../059-libxrandr2_2%3a1.5.4-1_arm64.deb ... 116s Unpacking libxrandr2:arm64 (2:1.5.4-1) ... 116s Selecting previously unselected package libdconf1:arm64. 116s Preparing to unpack .../060-libdconf1_0.40.0-4build2_arm64.deb ... 116s Unpacking libdconf1:arm64 (0.40.0-4build2) ... 116s Selecting previously unselected package dconf-service. 116s Preparing to unpack .../061-dconf-service_0.40.0-4build2_arm64.deb ... 116s Unpacking dconf-service (0.40.0-4build2) ... 116s Selecting previously unselected package dconf-gsettings-backend:arm64. 116s Preparing to unpack .../062-dconf-gsettings-backend_0.40.0-4build2_arm64.deb ... 116s Unpacking dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 116s Selecting previously unselected package libgtk-3-common. 116s Preparing to unpack .../063-libgtk-3-common_3.24.43-3ubuntu2_all.deb ... 116s Unpacking libgtk-3-common (3.24.43-3ubuntu2) ... 116s Selecting previously unselected package libgtk-3-0t64:arm64. 116s Preparing to unpack .../064-libgtk-3-0t64_3.24.43-3ubuntu2_arm64.deb ... 116s Unpacking libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 116s Selecting previously unselected package libglvnd0:arm64. 116s Preparing to unpack .../065-libglvnd0_1.7.0-1build1_arm64.deb ... 116s Unpacking libglvnd0:arm64 (1.7.0-1build1) ... 116s Selecting previously unselected package libglapi-mesa:arm64. 116s Preparing to unpack .../066-libglapi-mesa_24.2.3-1ubuntu1_arm64.deb ... 116s Unpacking libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 116s Selecting previously unselected package libx11-xcb1:arm64. 116s Preparing to unpack .../067-libx11-xcb1_2%3a1.8.7-1build1_arm64.deb ... 116s Unpacking libx11-xcb1:arm64 (2:1.8.7-1build1) ... 116s Selecting previously unselected package libxcb-dri2-0:arm64. 116s Preparing to unpack .../068-libxcb-dri2-0_1.17.0-2_arm64.deb ... 116s Unpacking libxcb-dri2-0:arm64 (1.17.0-2) ... 117s Selecting previously unselected package libxcb-dri3-0:arm64. 117s Preparing to unpack .../069-libxcb-dri3-0_1.17.0-2_arm64.deb ... 117s Unpacking libxcb-dri3-0:arm64 (1.17.0-2) ... 117s Selecting previously unselected package libxcb-glx0:arm64. 117s Preparing to unpack .../070-libxcb-glx0_1.17.0-2_arm64.deb ... 117s Unpacking libxcb-glx0:arm64 (1.17.0-2) ... 117s Selecting previously unselected package libxcb-present0:arm64. 117s Preparing to unpack .../071-libxcb-present0_1.17.0-2_arm64.deb ... 117s Unpacking libxcb-present0:arm64 (1.17.0-2) ... 117s Selecting previously unselected package libxcb-randr0:arm64. 117s Preparing to unpack .../072-libxcb-randr0_1.17.0-2_arm64.deb ... 117s Unpacking libxcb-randr0:arm64 (1.17.0-2) ... 117s Selecting previously unselected package libxcb-sync1:arm64. 117s Preparing to unpack .../073-libxcb-sync1_1.17.0-2_arm64.deb ... 117s Unpacking libxcb-sync1:arm64 (1.17.0-2) ... 117s Selecting previously unselected package libxcb-xfixes0:arm64. 117s Preparing to unpack .../074-libxcb-xfixes0_1.17.0-2_arm64.deb ... 117s Unpacking libxcb-xfixes0:arm64 (1.17.0-2) ... 117s Selecting previously unselected package libxshmfence1:arm64. 117s Preparing to unpack .../075-libxshmfence1_1.3-1build5_arm64.deb ... 117s Unpacking libxshmfence1:arm64 (1.3-1build5) ... 117s Selecting previously unselected package libxxf86vm1:arm64. 117s Preparing to unpack .../076-libxxf86vm1_1%3a1.1.4-1build4_arm64.deb ... 117s Unpacking libxxf86vm1:arm64 (1:1.1.4-1build4) ... 117s Selecting previously unselected package libdrm-amdgpu1:arm64. 117s Preparing to unpack .../077-libdrm-amdgpu1_2.4.122-1_arm64.deb ... 117s Unpacking libdrm-amdgpu1:arm64 (2.4.122-1) ... 117s Selecting previously unselected package libdrm-radeon1:arm64. 117s Preparing to unpack .../078-libdrm-radeon1_2.4.122-1_arm64.deb ... 117s Unpacking libdrm-radeon1:arm64 (2.4.122-1) ... 117s Selecting previously unselected package mesa-libgallium:arm64. 117s Preparing to unpack .../079-mesa-libgallium_24.2.3-1ubuntu1_arm64.deb ... 117s Unpacking mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 117s Selecting previously unselected package libvulkan1:arm64. 117s Preparing to unpack .../080-libvulkan1_1.3.290.0-1_arm64.deb ... 117s Unpacking libvulkan1:arm64 (1.3.290.0-1) ... 117s Selecting previously unselected package libwayland-server0:arm64. 117s Preparing to unpack .../081-libwayland-server0_1.23.0-1_arm64.deb ... 117s Unpacking libwayland-server0:arm64 (1.23.0-1) ... 117s Selecting previously unselected package libgbm1:arm64. 117s Preparing to unpack .../082-libgbm1_24.2.3-1ubuntu1_arm64.deb ... 117s Unpacking libgbm1:arm64 (24.2.3-1ubuntu1) ... 117s Selecting previously unselected package libgl1-mesa-dri:arm64. 117s Preparing to unpack .../083-libgl1-mesa-dri_24.2.3-1ubuntu1_arm64.deb ... 117s Unpacking libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 117s Selecting previously unselected package libglx-mesa0:arm64. 117s Preparing to unpack .../084-libglx-mesa0_24.2.3-1ubuntu1_arm64.deb ... 117s Unpacking libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 117s Selecting previously unselected package libglx0:arm64. 117s Preparing to unpack .../085-libglx0_1.7.0-1build1_arm64.deb ... 117s Unpacking libglx0:arm64 (1.7.0-1build1) ... 118s Selecting previously unselected package libgl1:arm64. 118s Preparing to unpack .../086-libgl1_1.7.0-1build1_arm64.deb ... 118s Unpacking libgl1:arm64 (1.7.0-1build1) ... 118s Selecting previously unselected package libasound2-data. 118s Preparing to unpack .../087-libasound2-data_1.2.12-1_all.deb ... 118s Unpacking libasound2-data (1.2.12-1) ... 118s Selecting previously unselected package libasound2t64:arm64. 118s Preparing to unpack .../088-libasound2t64_1.2.12-1_arm64.deb ... 118s Unpacking libasound2t64:arm64 (1.2.12-1) ... 118s Selecting previously unselected package libgif7:arm64. 118s Preparing to unpack .../089-libgif7_5.2.2-1ubuntu1_arm64.deb ... 118s Unpacking libgif7:arm64 (5.2.2-1ubuntu1) ... 118s Selecting previously unselected package x11-common. 118s Preparing to unpack .../090-x11-common_1%3a7.7+23ubuntu3_all.deb ... 118s Unpacking x11-common (1:7.7+23ubuntu3) ... 118s Selecting previously unselected package libxtst6:arm64. 118s Preparing to unpack .../091-libxtst6_2%3a1.2.3-1.1build1_arm64.deb ... 118s Unpacking libxtst6:arm64 (2:1.2.3-1.1build1) ... 118s Selecting previously unselected package openjdk-21-jre:arm64. 118s Preparing to unpack .../092-openjdk-21-jre_21.0.5+11-1_arm64.deb ... 118s Unpacking openjdk-21-jre:arm64 (21.0.5+11-1) ... 118s Selecting previously unselected package default-jre. 118s Preparing to unpack .../093-default-jre_2%3a1.21-76_arm64.deb ... 118s Unpacking default-jre (2:1.21-76) ... 118s Selecting previously unselected package libapache-pom-java. 118s Preparing to unpack .../094-libapache-pom-java_33-2_all.deb ... 118s Unpacking libapache-pom-java (33-2) ... 118s Selecting previously unselected package libcommons-parent-java. 118s Preparing to unpack .../095-libcommons-parent-java_56-1_all.deb ... 118s Unpacking libcommons-parent-java (56-1) ... 118s Selecting previously unselected package libcommons-compress-java. 118s Preparing to unpack .../096-libcommons-compress-java_1.25.0-1_all.deb ... 118s Unpacking libcommons-compress-java (1.25.0-1) ... 118s Selecting previously unselected package libcommons-logging-java. 118s Preparing to unpack .../097-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ... 118s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ... 118s Selecting previously unselected package libcommons-jexl2-java. 118s Preparing to unpack .../098-libcommons-jexl2-java_2.1.1-6_all.deb ... 118s Unpacking libcommons-jexl2-java (2.1.1-6) ... 118s Selecting previously unselected package libmjson-java. 118s Preparing to unpack .../099-libmjson-java_1.4.0-3_all.deb ... 118s Unpacking libmjson-java (1.4.0-3) ... 118s Selecting previously unselected package libmbedcrypto7t64:arm64. 118s Preparing to unpack .../100-libmbedcrypto7t64_2.28.8-1_arm64.deb ... 118s Unpacking libmbedcrypto7t64:arm64 (2.28.8-1) ... 118s Selecting previously unselected package libmbedx509-1t64:arm64. 118s Preparing to unpack .../101-libmbedx509-1t64_2.28.8-1_arm64.deb ... 118s Unpacking libmbedx509-1t64:arm64 (2.28.8-1) ... 118s Selecting previously unselected package libmbedtls14t64:arm64. 118s Preparing to unpack .../102-libmbedtls14t64_2.28.8-1_arm64.deb ... 118s Unpacking libmbedtls14t64:arm64 (2.28.8-1) ... 118s Selecting previously unselected package ncbi-vdb-data. 118s Preparing to unpack .../103-ncbi-vdb-data_3.0.2+dfsg-2build2_all.deb ... 118s Unpacking ncbi-vdb-data (3.0.2+dfsg-2build2) ... 118s Selecting previously unselected package libncbi-vdb3:arm64. 118s Preparing to unpack .../104-libncbi-vdb3_3.0.2+dfsg-2build2_arm64.deb ... 118s Unpacking libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 118s Selecting previously unselected package libncbi-ngs3:arm64. 118s Preparing to unpack .../105-libncbi-ngs3_3.0.3+dfsg-9ubuntu1_arm64.deb ... 118s Unpacking libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 119s Selecting previously unselected package libngs-jni:arm64. 119s Preparing to unpack .../106-libngs-jni_3.0.3+dfsg-9ubuntu1_arm64.deb ... 119s Unpacking libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 119s Selecting previously unselected package libngs-java:arm64. 119s Preparing to unpack .../107-libngs-java_3.0.3+dfsg-9ubuntu1_arm64.deb ... 119s Unpacking libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 119s Selecting previously unselected package librhino-java. 119s Preparing to unpack .../108-librhino-java_1.7.15-1_all.deb ... 119s Unpacking librhino-java (1.7.15-1) ... 119s Selecting previously unselected package libsnappy1v5:arm64. 119s Preparing to unpack .../109-libsnappy1v5_1.2.1-1_arm64.deb ... 119s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 119s Selecting previously unselected package libsnappy-jni. 119s Preparing to unpack .../110-libsnappy-jni_1.1.10.5-2_arm64.deb ... 119s Unpacking libsnappy-jni (1.1.10.5-2) ... 119s Selecting previously unselected package libsnappy-java. 119s Preparing to unpack .../111-libsnappy-java_1.1.10.5-2_all.deb ... 119s Unpacking libsnappy-java (1.1.10.5-2) ... 119s Selecting previously unselected package libhtsjdk-java. 119s Preparing to unpack .../112-libhtsjdk-java_4.1.0+dfsg-2_all.deb ... 119s Unpacking libhtsjdk-java (4.1.0+dfsg-2) ... 119s Selecting previously unselected package beagle. 119s Preparing to unpack .../113-beagle_220722-1_all.deb ... 119s Unpacking beagle (220722-1) ... 119s Selecting previously unselected package beagle-doc. 119s Preparing to unpack .../114-beagle-doc_220722-1_all.deb ... 119s Unpacking beagle-doc (220722-1) ... 119s Selecting previously unselected package autopkgtest-satdep. 119s Preparing to unpack .../115-1-autopkgtest-satdep.deb ... 119s Unpacking autopkgtest-satdep (0) ... 119s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 119s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ... 119s Setting up liblcms2-2:arm64 (2.14-2build1) ... 119s Setting up libpixman-1-0:arm64 (0.42.2-1build1) ... 119s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 119s Setting up libwayland-server0:arm64 (1.23.0-1) ... 119s Setting up libx11-xcb1:arm64 (2:1.8.7-1build1) ... 119s Setting up libxdamage1:arm64 (1:1.1.6-1build1) ... 119s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ... 119s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 119s Setting up hicolor-icon-theme (0.18-1) ... 119s Setting up libxi6:arm64 (2:1.8.2-1) ... 119s Setting up libmbedcrypto7t64:arm64 (2.28.8-1) ... 119s Setting up java-common (0.76) ... 119s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 119s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 119s Setting up beagle-doc (220722-1) ... 119s Setting up libxcb-render0:arm64 (1.17.0-2) ... 119s Setting up libdrm-radeon1:arm64 (2.4.122-1) ... 119s Setting up libglvnd0:arm64 (1.7.0-1build1) ... 119s Setting up libmjson-java (1.4.0-3) ... 119s Setting up libxcb-glx0:arm64 (1.17.0-2) ... 119s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 119s Setting up x11-common (1:7.7+23ubuntu3) ... 119s Setting up libdeflate0:arm64 (1.21-1) ... 119s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 119s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 119s Setting up libcolord2:arm64 (1.4.7-1build2) ... 119s Setting up libxxf86vm1:arm64 (1:1.1.4-1build4) ... 119s Setting up libsnappy1v5:arm64 (1.2.1-1) ... 119s Setting up libxcb-present0:arm64 (1.17.0-2) ... 119s Setting up libdconf1:arm64 (0.40.0-4build2) ... 119s Setting up libasound2-data (1.2.12-1) ... 119s Setting up librhino-java (1.7.15-1) ... 119s Setting up libasound2t64:arm64 (1.2.12-1) ... 119s Setting up libepoxy0:arm64 (1.5.10-1build1) ... 120s Setting up libxfixes3:arm64 (1:6.0.0-2build1) ... 120s Setting up libxcb-sync1:arm64 (1.17.0-2) ... 120s Setting up libapache-pom-java (33-2) ... 120s Setting up libavahi-common-data:arm64 (0.8-13ubuntu6) ... 120s Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... 120s Setting up libxinerama1:arm64 (2:1.1.4-3build1) ... 120s Setting up fonts-dejavu-mono (2.37-8) ... 120s Setting up libxrandr2:arm64 (2:1.5.4-1) ... 120s Setting up fonts-dejavu-core (2.37-8) ... 120s Setting up libpcsclite1:arm64 (2.3.0-1) ... 120s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 120s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 120s Setting up libvulkan1:arm64 (1.3.290.0-1) ... 120s Setting up libwebp7:arm64 (1.4.0-0.1) ... 120s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ... 120s Setting up libgif7:arm64 (5.2.2-1ubuntu1) ... 120s Setting up libxshmfence1:arm64 (1.3-1build5) ... 120s Setting up at-spi2-common (2.54.0-1) ... 120s Setting up libxcb-randr0:arm64 (1.17.0-2) ... 120s Setting up libharfbuzz0b:arm64 (9.0.0-1) ... 120s Setting up ncbi-vdb-data (3.0.2+dfsg-2build2) ... 120s Setting up libthai-data (0.1.29-2build1) ... 120s Setting up libwayland-egl1:arm64 (1.23.0-1) ... 120s Setting up ca-certificates-java (20240118) ... 120s No JRE found. Skipping Java certificates setup. 120s Setting up libsnappy-jni (1.1.10.5-2) ... 120s Setting up libxcomposite1:arm64 (1:0.4.5-1build3) ... 120s Setting up libdrm-amdgpu1:arm64 (2.4.122-1) ... 120s Setting up libwayland-client0:arm64 (1.23.0-1) ... 120s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 120s Setting up mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 120s Setting up libmbedx509-1t64:arm64 (2.28.8-1) ... 120s Setting up libatk1.0-0t64:arm64 (2.54.0-1) ... 120s Setting up openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 120s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode 120s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 120s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 120s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 120s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 120s Setting up libgbm1:arm64 (24.2.3-1ubuntu1) ... 120s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 120s Setting up libxtst6:arm64 (2:1.2.3-1.1build1) ... 120s Setting up libxcursor1:arm64 (1:1.2.2-1) ... 120s Setting up libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 120s Setting up libcommons-parent-java (56-1) ... 120s Setting up libavahi-common3:arm64 (0.8-13ubuntu6) ... 120s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 120s Setting up dconf-service (0.40.0-4build2) ... 120s Setting up libcommons-jexl2-java (2.1.1-6) ... 120s Setting up libthai0:arm64 (0.1.29-2build1) ... 120s Setting up libmbedtls14t64:arm64 (2.28.8-1) ... 120s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 120s Setting up libwayland-cursor0:arm64 (1.23.0-1) ... 120s Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 120s Setting up libsnappy-java (1.1.10.5-2) ... 120s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 120s Setting up libavahi-client3:arm64 (0.8-13ubuntu6) ... 120s Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 120s Setting up gtk-update-icon-cache (4.16.2+ds-2) ... 120s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 122s Regenerating fonts cache... done. 122s Setting up libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 122s Setting up libglx0:arm64 (1.7.0-1build1) ... 122s Setting up dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 122s Setting up libcommons-compress-java (1.25.0-1) ... 122s Setting up libpango-1.0-0:arm64 (1.54.0+ds-2) ... 122s Setting up libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 122s Setting up libcairo2:arm64 (1.18.2-2) ... 122s Setting up libgl1:arm64 (1.7.0-1build1) ... 122s Setting up libcairo-gobject2:arm64 (1.18.2-2) ... 122s Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 122s Setting up libcups2t64:arm64 (2.4.10-1ubuntu2) ... 122s Setting up libgtk-3-common (3.24.43-3ubuntu2) ... 122s Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 122s Setting up libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 122s Setting up libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 122s Setting up libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 122s Setting up libhtsjdk-java (4.1.0+dfsg-2) ... 122s Setting up adwaita-icon-theme (47.0-1) ... 122s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 122s Setting up humanity-icon-theme (0.6.16) ... 122s Setting up ubuntu-mono (24.04-0ubuntu1) ... 122s Processing triggers for man-db (2.12.1-3) ... 123s Processing triggers for libglib2.0-0t64:arm64 (2.82.1-0ubuntu1) ... 123s Setting up libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 123s Processing triggers for libc-bin (2.40-1ubuntu3) ... 123s Processing triggers for ca-certificates-java (20240118) ... 124s Adding debian:ACCVRAIZ1.pem 124s Adding debian:AC_RAIZ_FNMT-RCM.pem 124s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 124s Adding debian:ANF_Secure_Server_Root_CA.pem 124s Adding debian:Actalis_Authentication_Root_CA.pem 124s Adding debian:AffirmTrust_Commercial.pem 124s Adding debian:AffirmTrust_Networking.pem 124s Adding debian:AffirmTrust_Premium.pem 124s Adding debian:AffirmTrust_Premium_ECC.pem 124s Adding debian:Amazon_Root_CA_1.pem 124s Adding debian:Amazon_Root_CA_2.pem 124s Adding debian:Amazon_Root_CA_3.pem 124s Adding debian:Amazon_Root_CA_4.pem 124s Adding debian:Atos_TrustedRoot_2011.pem 124s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 124s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 124s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 124s Adding debian:BJCA_Global_Root_CA1.pem 124s Adding debian:BJCA_Global_Root_CA2.pem 124s Adding debian:Baltimore_CyberTrust_Root.pem 124s Adding debian:Buypass_Class_2_Root_CA.pem 124s Adding debian:Buypass_Class_3_Root_CA.pem 124s Adding debian:CA_Disig_Root_R2.pem 124s Adding debian:CFCA_EV_ROOT.pem 124s Adding debian:COMODO_Certification_Authority.pem 124s Adding debian:COMODO_ECC_Certification_Authority.pem 124s Adding debian:COMODO_RSA_Certification_Authority.pem 124s Adding debian:Certainly_Root_E1.pem 124s Adding debian:Certainly_Root_R1.pem 124s Adding debian:Certigna.pem 124s Adding debian:Certigna_Root_CA.pem 124s Adding debian:Certum_EC-384_CA.pem 124s Adding debian:Certum_Trusted_Network_CA.pem 124s Adding debian:Certum_Trusted_Network_CA_2.pem 124s Adding debian:Certum_Trusted_Root_CA.pem 124s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 124s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 124s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 124s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 124s Adding debian:Comodo_AAA_Services_root.pem 124s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 124s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 124s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 124s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 124s Adding debian:DigiCert_Assured_ID_Root_CA.pem 124s Adding debian:DigiCert_Assured_ID_Root_G2.pem 124s Adding debian:DigiCert_Assured_ID_Root_G3.pem 124s Adding debian:DigiCert_Global_Root_CA.pem 124s Adding debian:DigiCert_Global_Root_G2.pem 124s Adding debian:DigiCert_Global_Root_G3.pem 124s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 124s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 124s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 124s Adding debian:DigiCert_Trusted_Root_G4.pem 124s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 124s Adding debian:Entrust_Root_Certification_Authority.pem 124s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 124s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 124s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 124s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 124s Adding debian:GLOBALTRUST_2020.pem 124s Adding debian:GTS_Root_R1.pem 124s Adding debian:GTS_Root_R2.pem 124s Adding debian:GTS_Root_R3.pem 124s Adding debian:GTS_Root_R4.pem 124s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 124s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 124s Adding debian:GlobalSign_Root_CA.pem 124s Adding debian:GlobalSign_Root_CA_-_R3.pem 124s Adding debian:GlobalSign_Root_CA_-_R6.pem 124s Adding debian:GlobalSign_Root_E46.pem 124s Adding debian:GlobalSign_Root_R46.pem 124s Adding debian:Go_Daddy_Class_2_CA.pem 124s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 124s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 124s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 124s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 124s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 124s Adding debian:HiPKI_Root_CA_-_G1.pem 124s Adding debian:Hongkong_Post_Root_CA_3.pem 124s Adding debian:ISRG_Root_X1.pem 124s Adding debian:ISRG_Root_X2.pem 124s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 124s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 124s Adding debian:Izenpe.com.pem 124s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 124s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 124s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 124s Adding debian:NAVER_Global_Root_Certification_Authority.pem 124s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 124s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 124s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 124s Adding debian:QuoVadis_Root_CA_1_G3.pem 124s Adding debian:QuoVadis_Root_CA_2.pem 124s Adding debian:QuoVadis_Root_CA_2_G3.pem 124s Adding debian:QuoVadis_Root_CA_3.pem 124s Adding debian:QuoVadis_Root_CA_3_G3.pem 124s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 124s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 124s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 124s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 124s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 124s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 124s Adding debian:SZAFIR_ROOT_CA2.pem 124s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 124s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 124s Adding debian:SecureSign_RootCA11.pem 124s Adding debian:SecureTrust_CA.pem 124s Adding debian:Secure_Global_CA.pem 124s Adding debian:Security_Communication_ECC_RootCA1.pem 124s Adding debian:Security_Communication_RootCA2.pem 124s Adding debian:Security_Communication_RootCA3.pem 124s Adding debian:Security_Communication_Root_CA.pem 124s Adding debian:Starfield_Class_2_CA.pem 124s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 124s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 124s Adding debian:SwissSign_Gold_CA_-_G2.pem 124s Adding debian:SwissSign_Silver_CA_-_G2.pem 124s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 124s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 124s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 124s Adding debian:TWCA_Global_Root_CA.pem 124s Adding debian:TWCA_Root_Certification_Authority.pem 124s Adding debian:TeliaSonera_Root_CA_v1.pem 124s Adding debian:Telia_Root_CA_v2.pem 124s Adding debian:TrustAsia_Global_Root_CA_G3.pem 124s Adding debian:TrustAsia_Global_Root_CA_G4.pem 124s Adding debian:Trustwave_Global_Certification_Authority.pem 124s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 124s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 124s Adding debian:TunTrust_Root_CA.pem 124s Adding debian:UCA_Extended_Validation_Root.pem 124s Adding debian:UCA_Global_G2_Root.pem 124s Adding debian:USERTrust_ECC_Certification_Authority.pem 124s Adding debian:USERTrust_RSA_Certification_Authority.pem 124s Adding debian:XRamp_Global_CA_Root.pem 124s Adding debian:certSIGN_ROOT_CA.pem 124s Adding debian:certSIGN_Root_CA_G2.pem 124s Adding debian:e-Szigno_Root_CA_2017.pem 124s Adding debian:ePKI_Root_Certification_Authority.pem 124s Adding debian:emSign_ECC_Root_CA_-_C3.pem 124s Adding debian:emSign_ECC_Root_CA_-_G3.pem 124s Adding debian:emSign_Root_CA_-_C1.pem 124s Adding debian:emSign_Root_CA_-_G1.pem 124s Adding debian:vTrus_ECC_Root_CA.pem 124s Adding debian:vTrus_Root_CA.pem 124s done. 124s Setting up openjdk-21-jre:arm64 (21.0.5+11-1) ... 124s Setting up default-jre-headless (2:1.21-76) ... 124s Setting up default-jre (2:1.21-76) ... 124s Setting up beagle (220722-1) ... 124s Setting up autopkgtest-satdep (0) ... 130s (Reading database ... 94378 files and directories currently installed.) 130s Removing autopkgtest-satdep (0) ... 131s autopkgtest [19:05:52]: test beagle-run-sample-analysis: [----------------------- 133s beagle.22Jul22.46e.jar (version 5.4) 133s Copyright (C) 2014-2022 Brian L. Browning 133s Enter "java -jar beagle.22Jul22.46e.jar" to list command line argument 133s Start time: 07:05 PM UTC on 01 Nov 2024 133s 133s Command line: java -Xmx976m -jar beagle.22Jul22.46e.jar 133s gt=test.vcf.gz 133s out=out.gt 133s nthreads=2 133s 133s No genetic map is specified: using 1 cM = 1 Mb 133s 133s Reference samples: 0 133s Study samples: 191 133s 133s Window 1 [22:20000086-20099941] 133s Study markers: 1,356 134s 134s Burnin iteration 1: 1 second 134s Burnin iteration 2: 0 seconds 134s 134s Estimated ne: 136281 134s Estimated err: 1.4e-03 134s 134s Phasing iteration 1: 0 seconds 134s Phasing iteration 2: 0 seconds 135s Phasing iteration 3: 0 seconds 135s Phasing iteration 4: 0 seconds 135s Phasing iteration 5: 0 seconds 135s Phasing iteration 6: 0 seconds 135s Phasing iteration 7: 0 seconds 135s Phasing iteration 8: 0 seconds 135s Phasing iteration 9: 0 seconds 135s Phasing iteration 10: 0 seconds 135s Phasing iteration 11: 0 seconds 135s Phasing iteration 12: 0 seconds 135s Low frequency phasing: 0 seconds 135s 135s Cumulative Statistics: 135s 135s Study markers: 1,356 135s 135s Haplotype phasing time: 2 seconds 135s Total time: 3 seconds 135s 135s End time: 07:05 PM UTC on 01 Nov 2024 135s beagle.22Jul22.46e.jar finished 135s beagle.22Jul22.46e.jar (version 5.4) 135s Copyright (C) 2014-2022 Brian L. Browning 135s Enter "java -jar beagle.22Jul22.46e.jar" to list command line argument 135s Start time: 07:05 PM UTC on 01 Nov 2024 135s 135s Command line: java -Xmx976m -jar beagle.22Jul22.46e.jar 135s ref=ref.vcf.gz 135s gt=target.vcf.gz 135s out=out.ref 135s nthreads=2 135s 135s No genetic map is specified: using 1 cM = 1 Mb 136s 136s Reference samples: 181 136s Study samples: 10 136s 136s Window 1 [22:20000086-20099941] 136s Reference markers: 1,356 136s Study markers: 1,356 136s 136s Burnin iteration 1: 0 seconds 137s Burnin iteration 2: 0 seconds 137s 137s Estimated ne: 217008 137s Estimated err: 1.4e-03 137s 137s Phasing iteration 1: 0 seconds 137s Phasing iteration 2: 0 seconds 137s Phasing iteration 3: 0 seconds 137s Phasing iteration 4: 0 seconds 137s Phasing iteration 5: 0 seconds 137s Phasing iteration 6: 0 seconds 137s Phasing iteration 7: 0 seconds 137s Phasing iteration 8: 0 seconds 137s Phasing iteration 9: 0 seconds 137s Phasing iteration 10: 0 seconds 137s Phasing iteration 11: 0 seconds 137s Phasing iteration 12: 0 seconds 137s Low frequency phasing: 0 seconds 137s 137s Cumulative Statistics: 137s 137s Study markers: 1,356 137s 137s Haplotype phasing time: 1 second 137s Total time: 1 second 137s 137s End time: 07:05 PM UTC on 01 Nov 2024 137s beagle.22Jul22.46e.jar finished 137s beagle.22Jul22.46e.jar (version 5.4) 137s Copyright (C) 2014-2022 Brian L. Browning 137s Enter "java -jar beagle.22Jul22.46e.jar" to list command line argument 137s Start time: 07:05 PM UTC on 01 Nov 2024 137s 137s Command line: java -Xmx976m -jar beagle.22Jul22.46e.jar 137s ref=ref.bref3 137s gt=target.vcf.gz 137s out=out.bref3 137s nthreads=2 137s 137s No genetic map is specified: using 1 cM = 1 Mb 137s 137s Reference samples: 181 137s Study samples: 10 137s 137s Window 1 [22:20000086-20099941] 137s Reference markers: 1,356 137s Study markers: 1,356 137s 137s Burnin iteration 1: 0 seconds 138s Burnin iteration 2: 0 seconds 138s 138s Estimated ne: 217008 138s Estimated err: 1.4e-03 138s 138s Phasing iteration 1: 0 seconds 138s Phasing iteration 2: 0 seconds 138s Phasing iteration 3: 0 seconds 138s Phasing iteration 4: 0 seconds 138s Phasing iteration 5: 0 seconds 138s Phasing iteration 6: 0 seconds 138s Phasing iteration 7: 0 seconds 138s Phasing iteration 8: 0 seconds 138s Phasing iteration 9: 0 seconds 138s Phasing iteration 10: 0 seconds 138s Phasing iteration 11: 0 seconds 138s Phasing iteration 12: 0 seconds 138s Low frequency phasing: 0 seconds 138s 138s Cumulative Statistics: 138s 138s Study markers: 1,356 138s 138s Haplotype phasing time: 1 second 138s Total time: 1 second 138s 138s End time: 07:05 PM UTC on 01 Nov 2024 138s beagle.22Jul22.46e.jar finished 138s autopkgtest [19:05:59]: test beagle-run-sample-analysis: -----------------------] 139s beagle-run-sample-analysis PASS 139s autopkgtest [19:06:00]: test beagle-run-sample-analysis: - - - - - - - - - - results - - - - - - - - - - 139s autopkgtest [19:06:00]: test chromhmm-run-sample-analysis: preparing testbed 233s autopkgtest [19:07:34]: testbed dpkg architecture: arm64 233s autopkgtest [19:07:34]: testbed apt version: 2.9.8 233s autopkgtest [19:07:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup 234s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 234s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [44.0 kB] 234s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 234s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [183 kB] 234s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2775 kB] 235s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [241 kB] 235s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 235s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [2023 kB] 235s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [36.5 kB] 235s Fetched 5433 kB in 1s (4007 kB/s) 235s Reading package lists... 238s Reading package lists... 239s Building dependency tree... 239s Reading state information... 240s Calculating upgrade... 240s The following packages will be upgraded: 240s libevdev2 libftdi1-2 libinih1 nano python3-lazr.uri 240s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 240s Need to get 374 kB of archives. 240s After this operation, 17.4 kB of additional disk space will be used. 240s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libevdev2 arm64 1.13.3+dfsg-1 [36.0 kB] 241s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 nano arm64 8.2-1 [289 kB] 241s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libftdi1-2 arm64 1.5-7 [28.4 kB] 241s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libinih1 arm64 58-1ubuntu1 [7412 B] 241s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lazr.uri all 1.0.6-4 [13.6 kB] 241s Fetched 374 kB in 0s (758 kB/s) 242s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 242s Preparing to unpack .../libevdev2_1.13.3+dfsg-1_arm64.deb ... 242s Unpacking libevdev2:arm64 (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 242s Preparing to unpack .../archives/nano_8.2-1_arm64.deb ... 242s Unpacking nano (8.2-1) over (8.1-1) ... 242s Preparing to unpack .../libftdi1-2_1.5-7_arm64.deb ... 242s Unpacking libftdi1-2:arm64 (1.5-7) over (1.5-6build5) ... 242s Preparing to unpack .../libinih1_58-1ubuntu1_arm64.deb ... 242s Unpacking libinih1:arm64 (58-1ubuntu1) over (55-1ubuntu2) ... 242s Preparing to unpack .../python3-lazr.uri_1.0.6-4_all.deb ... 242s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 242s Setting up libinih1:arm64 (58-1ubuntu1) ... 242s Setting up python3-lazr.uri (1.0.6-4) ... 242s Setting up libftdi1-2:arm64 (1.5-7) ... 242s Setting up nano (8.2-1) ... 242s Setting up libevdev2:arm64 (1.13.3+dfsg-1) ... 242s Processing triggers for man-db (2.12.1-3) ... 243s Processing triggers for install-info (7.1.1-1) ... 243s Processing triggers for libc-bin (2.40-1ubuntu3) ... 243s Reading package lists... 244s Building dependency tree... 244s Reading state information... 245s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 245s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 245s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 245s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 245s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 246s Reading package lists... 246s Reading package lists... 247s Building dependency tree... 247s Reading state information... 247s Calculating upgrade... 248s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 248s Reading package lists... 248s Building dependency tree... 248s Reading state information... 249s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 253s Reading package lists... 253s Building dependency tree... 253s Reading state information... 254s Starting pkgProblemResolver with broken count: 0 254s Starting 2 pkgProblemResolver with broken count: 0 254s Done 255s The following additional packages will be installed: 255s adwaita-icon-theme at-spi2-common ca-certificates-java chromhmm 255s chromhmm-example dconf-gsettings-backend dconf-service default-jre 255s default-jre-headless fontconfig fontconfig-config fonts-dejavu-core 255s fonts-dejavu-mono gtk-update-icon-cache hicolor-icon-theme 255s humanity-icon-theme java-common java-wrappers libapache-pom-java 255s libasound2-data libasound2t64 libatk-bridge2.0-0t64 libatk1.0-0t64 255s libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 255s libbatik-java libcairo-gobject2 libcairo2 libcolord2 255s libcommons-compress-java libcommons-io-java libcommons-jexl2-java 255s libcommons-logging-java libcommons-parent-java libcups2t64 libdatrie1 255s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 libepoxy0 libfontconfig1 255s libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 255s libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 255s libgtk-3-0t64 libgtk-3-common libharfbuzz0b libhtsjdk-java libjaxp1.3-java 255s libjbig0 libjheatchart-java libjpeg-turbo8 libjpeg8 liblcms2-2 liblerc4 255s libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmjson-java 255s libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni libpango-1.0-0 255s libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 libpixman-1-0 255s librhino-java libsharpyuv0 libsnappy-java libsnappy-jni libsnappy1v5 255s libthai-data libthai0 libtiff6 libvulkan1 libwayland-client0 255s libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libx11-xcb1 255s libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 255s libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 255s libxcursor1 libxdamage1 libxfixes3 libxi6 libxinerama1 255s libxml-commons-external-java libxmlgraphics-commons-java libxrandr2 255s libxrender1 libxshmfence1 libxtst6 libxxf86vm1 mesa-libgallium ncbi-vdb-data 255s openjdk-21-jre openjdk-21-jre-headless ubuntu-mono unzip x11-common 255s Suggested packages: 255s alsa-utils libasound2-plugins colord libasm-java libxz-java 255s libavalon-framework-java libexcalibur-logkit-java liblog4j1.2-java 255s cups-common gvfs picard-tools liblcms2-utils libngs-java-doc pcscd rhino 255s libxmlgraphics-commons-java-doc libnss-mdns fonts-dejavu-extra 255s fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei 255s | fonts-wqy-zenhei fonts-indic zip 255s Recommended packages: 255s librsvg2-common alsa-ucm-conf alsa-topology-conf at-spi2-core 255s libgdk-pixbuf2.0-bin libgl1-amber-dri libgtk-3-bin mesa-vulkan-drivers 255s | vulkan-icd libatk-wrapper-java-jni fonts-dejavu-extra 255s The following NEW packages will be installed: 255s adwaita-icon-theme at-spi2-common autopkgtest-satdep ca-certificates-java 255s chromhmm chromhmm-example dconf-gsettings-backend dconf-service default-jre 255s default-jre-headless fontconfig fontconfig-config fonts-dejavu-core 255s fonts-dejavu-mono gtk-update-icon-cache hicolor-icon-theme 255s humanity-icon-theme java-common java-wrappers libapache-pom-java 255s libasound2-data libasound2t64 libatk-bridge2.0-0t64 libatk1.0-0t64 255s libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 255s libbatik-java libcairo-gobject2 libcairo2 libcolord2 255s libcommons-compress-java libcommons-io-java libcommons-jexl2-java 255s libcommons-logging-java libcommons-parent-java libcups2t64 libdatrie1 255s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 libepoxy0 libfontconfig1 255s libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 255s libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 255s libgtk-3-0t64 libgtk-3-common libharfbuzz0b libhtsjdk-java libjaxp1.3-java 255s libjbig0 libjheatchart-java libjpeg-turbo8 libjpeg8 liblcms2-2 liblerc4 255s libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmjson-java 255s libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni libpango-1.0-0 255s libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 libpixman-1-0 255s librhino-java libsharpyuv0 libsnappy-java libsnappy-jni libsnappy1v5 255s libthai-data libthai0 libtiff6 libvulkan1 libwayland-client0 255s libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libx11-xcb1 255s libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 255s libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 255s libxcursor1 libxdamage1 libxfixes3 libxi6 libxinerama1 255s libxml-commons-external-java libxmlgraphics-commons-java libxrandr2 255s libxrender1 libxshmfence1 libxtst6 libxxf86vm1 mesa-libgallium ncbi-vdb-data 255s openjdk-21-jre openjdk-21-jre-headless ubuntu-mono unzip x11-common 255s 0 upgraded, 124 newly installed, 0 to remove and 0 not upgraded. 255s Need to get 125 MB/125 MB of archives. 255s After this operation, 391 MB of additional disk space will be used. 255s Get:1 /tmp/autopkgtest.d7OWAi/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [712 B] 255s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 255s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 255s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 255s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.21-1 [46.2 kB] 255s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 255s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 255s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 255s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 255s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 255s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1 [145 kB] 255s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 gtk-update-icon-cache arm64 4.16.2+ds-2 [51.1 kB] 255s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 hicolor-icon-theme all 0.18-1 [13.5 kB] 255s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 humanity-icon-theme all 0.6.16 [1282 kB] 255s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 ubuntu-mono all 24.04-0ubuntu1 [151 kB] 255s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 adwaita-icon-theme all 47.0-1 [525 kB] 255s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 at-spi2-common all 2.54.0-1 [8774 B] 255s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 ca-certificates-java all 20240118 [11.6 kB] 255s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 java-common all 0.76 [6852 B] 255s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.14-2build1 [161 kB] 255s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcsclite1 arm64 2.3.0-1 [24.4 kB] 255s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre-headless arm64 21.0.5+11-1 [45.7 MB] 257s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre-headless arm64 2:1.21-76 [3176 B] 257s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [55.0 kB] 257s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 257s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [80.2 kB] 257s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [66.6 kB] 257s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 257s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 257s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 257s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 257s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.42.2-1build1 [204 kB] 257s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 257s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 257s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 257s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 257s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo-gobject2 arm64 1.18.2-2 [127 kB] 257s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolord2 arm64 1.4.7-1build2 [149 kB] 257s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common-data arm64 0.8-13ubuntu6 [29.6 kB] 257s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common3 arm64 0.8-13ubuntu6 [23.3 kB] 257s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-client3 arm64 0.8-13ubuntu6 [27.2 kB] 257s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libcups2t64 arm64 2.4.10-1ubuntu2 [271 kB] 257s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libepoxy0 arm64 1.5.10-1build1 [240 kB] 257s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 257s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 9.0.0-1 [486 kB] 257s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 257s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 257s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 257s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 257s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-2 [233 kB] 257s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-2 [48.8 kB] 257s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-2 [27.5 kB] 257s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB] 257s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-cursor0 arm64 1.23.0-1 [10.6 kB] 257s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-egl1 arm64 1.23.0-1 [5636 B] 257s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcomposite1 arm64 1:0.4.5-1build3 [6336 B] 257s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB] 257s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcursor1 arm64 1:1.2.2-1 [21.2 kB] 257s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libxdamage1 arm64 1:1.1.6-1build1 [6236 B] 257s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libxinerama1 arm64 2:1.1.4-3build1 [6394 B] 257s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrandr2 arm64 2:1.5.4-1 [19.6 kB] 257s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libdconf1 arm64 0.40.0-4build2 [39.8 kB] 257s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-service arm64 0.40.0-4build2 [26.9 kB] 257s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-gsettings-backend arm64 0.40.0-4build2 [22.0 kB] 257s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-common all 3.24.43-3ubuntu2 [1202 kB] 257s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-0t64 arm64 3.24.43-3ubuntu2 [2898 kB] 257s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB] 257s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB] 257s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.7-1build1 [7870 B] 257s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B] 257s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B] 257s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB] 257s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B] 257s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB] 257s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B] 257s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB] 257s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B] 257s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B] 257s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.122-1 [20.9 kB] 257s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.122-1 [20.8 kB] 257s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB] 258s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.290.0-1 [153 kB] 258s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB] 258s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB] 258s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB] 258s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB] 258s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB] 258s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB] 258s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2-data all 1.2.12-1 [21.0 kB] 258s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2t64 arm64 1.2.12-1 [384 kB] 258s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 258s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 258s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libxtst6 arm64 2:1.2.3-1.1build1 [13.0 kB] 258s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre arm64 21.0.5+11-1 [221 kB] 258s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre arm64 2:1.21-76 [918 B] 258s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 258s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 java-wrappers all 0.5 [9042 B] 258s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxp1.3-java all 1.3.05-6 [227 kB] 258s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxml-commons-external-java all 1.4.01-6 [240 kB] 258s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapache-pom-java all 33-2 [5874 B] 258s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-parent-java all 56-1 [10.7 kB] 258s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-io-java all 2.16.1-1 [451 kB] 258s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 258s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxmlgraphics-commons-java all 2.8-2 [619 kB] 258s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 libbatik-java all 1.17+dfsg-1 [3877 kB] 259s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-compress-java all 1.25.0-1 [612 kB] 259s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-jexl2-java all 2.1.1-6 [250 kB] 259s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmjson-java all 1.4.0-3 [60.4 kB] 259s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedcrypto7t64 arm64 2.28.8-1 [209 kB] 259s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedx509-1t64 arm64 2.28.8-1 [47.2 kB] 259s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedtls14t64 arm64 2.28.8-1 [82.2 kB] 259s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 ncbi-vdb-data all 3.0.2+dfsg-2build2 [67.5 kB] 259s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-vdb3 arm64 3.0.2+dfsg-2build2 [1143 kB] 259s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-ngs3 arm64 3.0.3+dfsg-9ubuntu1 [145 kB] 259s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-jni arm64 3.0.3+dfsg-9ubuntu1 [4844 B] 259s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-java arm64 3.0.3+dfsg-9ubuntu1 [91.1 kB] 259s Get:117 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 librhino-java all 1.7.15-1 [1354 kB] 259s Get:118 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 259s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-jni arm64 1.1.10.5-2 [6618 B] 259s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-java all 1.1.10.5-2 [83.7 kB] 259s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtsjdk-java all 4.1.0+dfsg-2 [1823 kB] 259s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjheatchart-java all 0.6-1.1 [8408 B] 259s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 chromhmm all 1.25+dfsg-1 [191 kB] 259s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 chromhmm-example all 1.25+dfsg-1 [45.0 MB] 263s Fetched 125 MB in 8s (16.4 MB/s) 263s Selecting previously unselected package libgdk-pixbuf2.0-common. 263s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 263s Preparing to unpack .../000-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 263s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 263s Selecting previously unselected package libjpeg-turbo8:arm64. 263s Preparing to unpack .../001-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 263s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 263s Selecting previously unselected package libjpeg8:arm64. 263s Preparing to unpack .../002-libjpeg8_8c-2ubuntu11_arm64.deb ... 263s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 263s Selecting previously unselected package libdeflate0:arm64. 263s Preparing to unpack .../003-libdeflate0_1.21-1_arm64.deb ... 263s Unpacking libdeflate0:arm64 (1.21-1) ... 263s Selecting previously unselected package libjbig0:arm64. 263s Preparing to unpack .../004-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 263s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 263s Selecting previously unselected package liblerc4:arm64. 263s Preparing to unpack .../005-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 263s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 263s Selecting previously unselected package libsharpyuv0:arm64. 263s Preparing to unpack .../006-libsharpyuv0_1.4.0-0.1_arm64.deb ... 263s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 263s Selecting previously unselected package libwebp7:arm64. 263s Preparing to unpack .../007-libwebp7_1.4.0-0.1_arm64.deb ... 263s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 263s Selecting previously unselected package libtiff6:arm64. 263s Preparing to unpack .../008-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 263s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 263s Selecting previously unselected package libgdk-pixbuf-2.0-0:arm64. 263s Preparing to unpack .../009-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_arm64.deb ... 263s Unpacking libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 263s Selecting previously unselected package gtk-update-icon-cache. 263s Preparing to unpack .../010-gtk-update-icon-cache_4.16.2+ds-2_arm64.deb ... 263s No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. 263s No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. 263s Unpacking gtk-update-icon-cache (4.16.2+ds-2) ... 263s Selecting previously unselected package hicolor-icon-theme. 263s Preparing to unpack .../011-hicolor-icon-theme_0.18-1_all.deb ... 263s Unpacking hicolor-icon-theme (0.18-1) ... 263s Selecting previously unselected package humanity-icon-theme. 263s Preparing to unpack .../012-humanity-icon-theme_0.6.16_all.deb ... 263s Unpacking humanity-icon-theme (0.6.16) ... 264s Selecting previously unselected package ubuntu-mono. 264s Preparing to unpack .../013-ubuntu-mono_24.04-0ubuntu1_all.deb ... 264s Unpacking ubuntu-mono (24.04-0ubuntu1) ... 264s Selecting previously unselected package adwaita-icon-theme. 264s Preparing to unpack .../014-adwaita-icon-theme_47.0-1_all.deb ... 264s Unpacking adwaita-icon-theme (47.0-1) ... 264s Selecting previously unselected package at-spi2-common. 265s Preparing to unpack .../015-at-spi2-common_2.54.0-1_all.deb ... 265s Unpacking at-spi2-common (2.54.0-1) ... 265s Selecting previously unselected package ca-certificates-java. 265s Preparing to unpack .../016-ca-certificates-java_20240118_all.deb ... 265s Unpacking ca-certificates-java (20240118) ... 265s Selecting previously unselected package java-common. 265s Preparing to unpack .../017-java-common_0.76_all.deb ... 265s Unpacking java-common (0.76) ... 265s Selecting previously unselected package liblcms2-2:arm64. 265s Preparing to unpack .../018-liblcms2-2_2.14-2build1_arm64.deb ... 265s Unpacking liblcms2-2:arm64 (2.14-2build1) ... 265s Selecting previously unselected package libpcsclite1:arm64. 265s Preparing to unpack .../019-libpcsclite1_2.3.0-1_arm64.deb ... 265s Unpacking libpcsclite1:arm64 (2.3.0-1) ... 265s Selecting previously unselected package openjdk-21-jre-headless:arm64. 265s Preparing to unpack .../020-openjdk-21-jre-headless_21.0.5+11-1_arm64.deb ... 265s Unpacking openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 266s Selecting previously unselected package default-jre-headless. 266s Preparing to unpack .../021-default-jre-headless_2%3a1.21-76_arm64.deb ... 266s Unpacking default-jre-headless (2:1.21-76) ... 266s Selecting previously unselected package libatk1.0-0t64:arm64. 266s Preparing to unpack .../022-libatk1.0-0t64_2.54.0-1_arm64.deb ... 266s Unpacking libatk1.0-0t64:arm64 (2.54.0-1) ... 266s Selecting previously unselected package libxi6:arm64. 266s Preparing to unpack .../023-libxi6_2%3a1.8.2-1_arm64.deb ... 266s Unpacking libxi6:arm64 (2:1.8.2-1) ... 266s Selecting previously unselected package libatspi2.0-0t64:arm64. 266s Preparing to unpack .../024-libatspi2.0-0t64_2.54.0-1_arm64.deb ... 266s Unpacking libatspi2.0-0t64:arm64 (2.54.0-1) ... 266s Selecting previously unselected package libatk-bridge2.0-0t64:arm64. 266s Preparing to unpack .../025-libatk-bridge2.0-0t64_2.54.0-1_arm64.deb ... 266s Unpacking libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 266s Selecting previously unselected package fonts-dejavu-mono. 266s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ... 266s Unpacking fonts-dejavu-mono (2.37-8) ... 266s Selecting previously unselected package fonts-dejavu-core. 266s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ... 266s Unpacking fonts-dejavu-core (2.37-8) ... 266s Selecting previously unselected package fontconfig-config. 266s Preparing to unpack .../028-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 266s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 266s Selecting previously unselected package libfontconfig1:arm64. 266s Preparing to unpack .../029-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 266s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 266s Selecting previously unselected package libpixman-1-0:arm64. 266s Preparing to unpack .../030-libpixman-1-0_0.42.2-1build1_arm64.deb ... 266s Unpacking libpixman-1-0:arm64 (0.42.2-1build1) ... 266s Selecting previously unselected package libxcb-render0:arm64. 267s Preparing to unpack .../031-libxcb-render0_1.17.0-2_arm64.deb ... 267s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 267s Selecting previously unselected package libxcb-shm0:arm64. 267s Preparing to unpack .../032-libxcb-shm0_1.17.0-2_arm64.deb ... 267s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 267s Selecting previously unselected package libxrender1:arm64. 267s Preparing to unpack .../033-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 267s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 267s Selecting previously unselected package libcairo2:arm64. 267s Preparing to unpack .../034-libcairo2_1.18.2-2_arm64.deb ... 267s Unpacking libcairo2:arm64 (1.18.2-2) ... 267s Selecting previously unselected package libcairo-gobject2:arm64. 267s Preparing to unpack .../035-libcairo-gobject2_1.18.2-2_arm64.deb ... 267s Unpacking libcairo-gobject2:arm64 (1.18.2-2) ... 267s Selecting previously unselected package libcolord2:arm64. 267s Preparing to unpack .../036-libcolord2_1.4.7-1build2_arm64.deb ... 267s Unpacking libcolord2:arm64 (1.4.7-1build2) ... 267s Selecting previously unselected package libavahi-common-data:arm64. 267s Preparing to unpack .../037-libavahi-common-data_0.8-13ubuntu6_arm64.deb ... 267s Unpacking libavahi-common-data:arm64 (0.8-13ubuntu6) ... 267s Selecting previously unselected package libavahi-common3:arm64. 267s Preparing to unpack .../038-libavahi-common3_0.8-13ubuntu6_arm64.deb ... 267s Unpacking libavahi-common3:arm64 (0.8-13ubuntu6) ... 267s Selecting previously unselected package libavahi-client3:arm64. 267s Preparing to unpack .../039-libavahi-client3_0.8-13ubuntu6_arm64.deb ... 267s Unpacking libavahi-client3:arm64 (0.8-13ubuntu6) ... 267s Selecting previously unselected package libcups2t64:arm64. 267s Preparing to unpack .../040-libcups2t64_2.4.10-1ubuntu2_arm64.deb ... 267s Unpacking libcups2t64:arm64 (2.4.10-1ubuntu2) ... 267s Selecting previously unselected package libepoxy0:arm64. 267s Preparing to unpack .../041-libepoxy0_1.5.10-1build1_arm64.deb ... 267s Unpacking libepoxy0:arm64 (1.5.10-1build1) ... 267s Selecting previously unselected package libgraphite2-3:arm64. 267s Preparing to unpack .../042-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 267s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 267s Selecting previously unselected package libharfbuzz0b:arm64. 267s Preparing to unpack .../043-libharfbuzz0b_9.0.0-1_arm64.deb ... 267s Unpacking libharfbuzz0b:arm64 (9.0.0-1) ... 267s Selecting previously unselected package fontconfig. 267s Preparing to unpack .../044-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 267s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 267s Selecting previously unselected package libthai-data. 267s Preparing to unpack .../045-libthai-data_0.1.29-2build1_all.deb ... 267s Unpacking libthai-data (0.1.29-2build1) ... 267s Selecting previously unselected package libdatrie1:arm64. 267s Preparing to unpack .../046-libdatrie1_0.2.13-3build1_arm64.deb ... 267s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 267s Selecting previously unselected package libthai0:arm64. 267s Preparing to unpack .../047-libthai0_0.1.29-2build1_arm64.deb ... 267s Unpacking libthai0:arm64 (0.1.29-2build1) ... 267s Selecting previously unselected package libpango-1.0-0:arm64. 267s Preparing to unpack .../048-libpango-1.0-0_1.54.0+ds-2_arm64.deb ... 267s Unpacking libpango-1.0-0:arm64 (1.54.0+ds-2) ... 267s Selecting previously unselected package libpangoft2-1.0-0:arm64. 267s Preparing to unpack .../049-libpangoft2-1.0-0_1.54.0+ds-2_arm64.deb ... 267s Unpacking libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 267s Selecting previously unselected package libpangocairo-1.0-0:arm64. 267s Preparing to unpack .../050-libpangocairo-1.0-0_1.54.0+ds-2_arm64.deb ... 267s Unpacking libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 267s Selecting previously unselected package libwayland-client0:arm64. 267s Preparing to unpack .../051-libwayland-client0_1.23.0-1_arm64.deb ... 267s Unpacking libwayland-client0:arm64 (1.23.0-1) ... 267s Selecting previously unselected package libwayland-cursor0:arm64. 267s Preparing to unpack .../052-libwayland-cursor0_1.23.0-1_arm64.deb ... 267s Unpacking libwayland-cursor0:arm64 (1.23.0-1) ... 268s Selecting previously unselected package libwayland-egl1:arm64. 268s Preparing to unpack .../053-libwayland-egl1_1.23.0-1_arm64.deb ... 268s Unpacking libwayland-egl1:arm64 (1.23.0-1) ... 268s Selecting previously unselected package libxcomposite1:arm64. 268s Preparing to unpack .../054-libxcomposite1_1%3a0.4.5-1build3_arm64.deb ... 268s Unpacking libxcomposite1:arm64 (1:0.4.5-1build3) ... 268s Selecting previously unselected package libxfixes3:arm64. 268s Preparing to unpack .../055-libxfixes3_1%3a6.0.0-2build1_arm64.deb ... 268s Unpacking libxfixes3:arm64 (1:6.0.0-2build1) ... 268s Selecting previously unselected package libxcursor1:arm64. 268s Preparing to unpack .../056-libxcursor1_1%3a1.2.2-1_arm64.deb ... 268s Unpacking libxcursor1:arm64 (1:1.2.2-1) ... 268s Selecting previously unselected package libxdamage1:arm64. 268s Preparing to unpack .../057-libxdamage1_1%3a1.1.6-1build1_arm64.deb ... 268s Unpacking libxdamage1:arm64 (1:1.1.6-1build1) ... 268s Selecting previously unselected package libxinerama1:arm64. 268s Preparing to unpack .../058-libxinerama1_2%3a1.1.4-3build1_arm64.deb ... 268s Unpacking libxinerama1:arm64 (2:1.1.4-3build1) ... 268s Selecting previously unselected package libxrandr2:arm64. 268s Preparing to unpack .../059-libxrandr2_2%3a1.5.4-1_arm64.deb ... 268s Unpacking libxrandr2:arm64 (2:1.5.4-1) ... 268s Selecting previously unselected package libdconf1:arm64. 268s Preparing to unpack .../060-libdconf1_0.40.0-4build2_arm64.deb ... 268s Unpacking libdconf1:arm64 (0.40.0-4build2) ... 268s Selecting previously unselected package dconf-service. 268s Preparing to unpack .../061-dconf-service_0.40.0-4build2_arm64.deb ... 268s Unpacking dconf-service (0.40.0-4build2) ... 268s Selecting previously unselected package dconf-gsettings-backend:arm64. 268s Preparing to unpack .../062-dconf-gsettings-backend_0.40.0-4build2_arm64.deb ... 268s Unpacking dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 268s Selecting previously unselected package libgtk-3-common. 268s Preparing to unpack .../063-libgtk-3-common_3.24.43-3ubuntu2_all.deb ... 268s Unpacking libgtk-3-common (3.24.43-3ubuntu2) ... 268s Selecting previously unselected package libgtk-3-0t64:arm64. 268s Preparing to unpack .../064-libgtk-3-0t64_3.24.43-3ubuntu2_arm64.deb ... 268s Unpacking libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 268s Selecting previously unselected package libglvnd0:arm64. 268s Preparing to unpack .../065-libglvnd0_1.7.0-1build1_arm64.deb ... 268s Unpacking libglvnd0:arm64 (1.7.0-1build1) ... 268s Selecting previously unselected package libglapi-mesa:arm64. 268s Preparing to unpack .../066-libglapi-mesa_24.2.3-1ubuntu1_arm64.deb ... 268s Unpacking libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 268s Selecting previously unselected package libx11-xcb1:arm64. 268s Preparing to unpack .../067-libx11-xcb1_2%3a1.8.7-1build1_arm64.deb ... 268s Unpacking libx11-xcb1:arm64 (2:1.8.7-1build1) ... 268s Selecting previously unselected package libxcb-dri2-0:arm64. 268s Preparing to unpack .../068-libxcb-dri2-0_1.17.0-2_arm64.deb ... 268s Unpacking libxcb-dri2-0:arm64 (1.17.0-2) ... 268s Selecting previously unselected package libxcb-dri3-0:arm64. 268s Preparing to unpack .../069-libxcb-dri3-0_1.17.0-2_arm64.deb ... 268s Unpacking libxcb-dri3-0:arm64 (1.17.0-2) ... 268s Selecting previously unselected package libxcb-glx0:arm64. 268s Preparing to unpack .../070-libxcb-glx0_1.17.0-2_arm64.deb ... 268s Unpacking libxcb-glx0:arm64 (1.17.0-2) ... 268s Selecting previously unselected package libxcb-present0:arm64. 268s Preparing to unpack .../071-libxcb-present0_1.17.0-2_arm64.deb ... 268s Unpacking libxcb-present0:arm64 (1.17.0-2) ... 268s Selecting previously unselected package libxcb-randr0:arm64. 268s Preparing to unpack .../072-libxcb-randr0_1.17.0-2_arm64.deb ... 268s Unpacking libxcb-randr0:arm64 (1.17.0-2) ... 268s Selecting previously unselected package libxcb-sync1:arm64. 268s Preparing to unpack .../073-libxcb-sync1_1.17.0-2_arm64.deb ... 268s Unpacking libxcb-sync1:arm64 (1.17.0-2) ... 269s Selecting previously unselected package libxcb-xfixes0:arm64. 269s Preparing to unpack .../074-libxcb-xfixes0_1.17.0-2_arm64.deb ... 269s Unpacking libxcb-xfixes0:arm64 (1.17.0-2) ... 269s Selecting previously unselected package libxshmfence1:arm64. 269s Preparing to unpack .../075-libxshmfence1_1.3-1build5_arm64.deb ... 269s Unpacking libxshmfence1:arm64 (1.3-1build5) ... 269s Selecting previously unselected package libxxf86vm1:arm64. 269s Preparing to unpack .../076-libxxf86vm1_1%3a1.1.4-1build4_arm64.deb ... 269s Unpacking libxxf86vm1:arm64 (1:1.1.4-1build4) ... 269s Selecting previously unselected package libdrm-amdgpu1:arm64. 269s Preparing to unpack .../077-libdrm-amdgpu1_2.4.122-1_arm64.deb ... 269s Unpacking libdrm-amdgpu1:arm64 (2.4.122-1) ... 269s Selecting previously unselected package libdrm-radeon1:arm64. 269s Preparing to unpack .../078-libdrm-radeon1_2.4.122-1_arm64.deb ... 269s Unpacking libdrm-radeon1:arm64 (2.4.122-1) ... 269s Selecting previously unselected package mesa-libgallium:arm64. 269s Preparing to unpack .../079-mesa-libgallium_24.2.3-1ubuntu1_arm64.deb ... 269s Unpacking mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 269s Selecting previously unselected package libvulkan1:arm64. 269s Preparing to unpack .../080-libvulkan1_1.3.290.0-1_arm64.deb ... 269s Unpacking libvulkan1:arm64 (1.3.290.0-1) ... 269s Selecting previously unselected package libwayland-server0:arm64. 269s Preparing to unpack .../081-libwayland-server0_1.23.0-1_arm64.deb ... 269s Unpacking libwayland-server0:arm64 (1.23.0-1) ... 269s Selecting previously unselected package libgbm1:arm64. 269s Preparing to unpack .../082-libgbm1_24.2.3-1ubuntu1_arm64.deb ... 269s Unpacking libgbm1:arm64 (24.2.3-1ubuntu1) ... 269s Selecting previously unselected package libgl1-mesa-dri:arm64. 269s Preparing to unpack .../083-libgl1-mesa-dri_24.2.3-1ubuntu1_arm64.deb ... 269s Unpacking libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 269s Selecting previously unselected package libglx-mesa0:arm64. 269s Preparing to unpack .../084-libglx-mesa0_24.2.3-1ubuntu1_arm64.deb ... 269s Unpacking libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 269s Selecting previously unselected package libglx0:arm64. 269s Preparing to unpack .../085-libglx0_1.7.0-1build1_arm64.deb ... 269s Unpacking libglx0:arm64 (1.7.0-1build1) ... 269s Selecting previously unselected package libgl1:arm64. 269s Preparing to unpack .../086-libgl1_1.7.0-1build1_arm64.deb ... 269s Unpacking libgl1:arm64 (1.7.0-1build1) ... 269s Selecting previously unselected package libasound2-data. 269s Preparing to unpack .../087-libasound2-data_1.2.12-1_all.deb ... 269s Unpacking libasound2-data (1.2.12-1) ... 269s Selecting previously unselected package libasound2t64:arm64. 269s Preparing to unpack .../088-libasound2t64_1.2.12-1_arm64.deb ... 269s Unpacking libasound2t64:arm64 (1.2.12-1) ... 269s Selecting previously unselected package libgif7:arm64. 269s Preparing to unpack .../089-libgif7_5.2.2-1ubuntu1_arm64.deb ... 269s Unpacking libgif7:arm64 (5.2.2-1ubuntu1) ... 269s Selecting previously unselected package x11-common. 269s Preparing to unpack .../090-x11-common_1%3a7.7+23ubuntu3_all.deb ... 269s Unpacking x11-common (1:7.7+23ubuntu3) ... 269s Selecting previously unselected package libxtst6:arm64. 269s Preparing to unpack .../091-libxtst6_2%3a1.2.3-1.1build1_arm64.deb ... 269s Unpacking libxtst6:arm64 (2:1.2.3-1.1build1) ... 270s Selecting previously unselected package openjdk-21-jre:arm64. 270s Preparing to unpack .../092-openjdk-21-jre_21.0.5+11-1_arm64.deb ... 270s Unpacking openjdk-21-jre:arm64 (21.0.5+11-1) ... 270s Selecting previously unselected package default-jre. 270s Preparing to unpack .../093-default-jre_2%3a1.21-76_arm64.deb ... 270s Unpacking default-jre (2:1.21-76) ... 270s Selecting previously unselected package unzip. 270s Preparing to unpack .../094-unzip_6.0-28ubuntu6_arm64.deb ... 270s Unpacking unzip (6.0-28ubuntu6) ... 270s Selecting previously unselected package java-wrappers. 270s Preparing to unpack .../095-java-wrappers_0.5_all.deb ... 270s Unpacking java-wrappers (0.5) ... 270s Selecting previously unselected package libjaxp1.3-java. 270s Preparing to unpack .../096-libjaxp1.3-java_1.3.05-6_all.deb ... 270s Unpacking libjaxp1.3-java (1.3.05-6) ... 270s Selecting previously unselected package libxml-commons-external-java. 270s Preparing to unpack .../097-libxml-commons-external-java_1.4.01-6_all.deb ... 270s Unpacking libxml-commons-external-java (1.4.01-6) ... 270s Selecting previously unselected package libapache-pom-java. 270s Preparing to unpack .../098-libapache-pom-java_33-2_all.deb ... 270s Unpacking libapache-pom-java (33-2) ... 270s Selecting previously unselected package libcommons-parent-java. 270s Preparing to unpack .../099-libcommons-parent-java_56-1_all.deb ... 270s Unpacking libcommons-parent-java (56-1) ... 270s Selecting previously unselected package libcommons-io-java. 270s Preparing to unpack .../100-libcommons-io-java_2.16.1-1_all.deb ... 270s Unpacking libcommons-io-java (2.16.1-1) ... 270s Selecting previously unselected package libcommons-logging-java. 270s Preparing to unpack .../101-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ... 270s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ... 270s Selecting previously unselected package libxmlgraphics-commons-java. 270s Preparing to unpack .../102-libxmlgraphics-commons-java_2.8-2_all.deb ... 270s Unpacking libxmlgraphics-commons-java (2.8-2) ... 270s Selecting previously unselected package libbatik-java. 270s Preparing to unpack .../103-libbatik-java_1.17+dfsg-1_all.deb ... 270s Unpacking libbatik-java (1.17+dfsg-1) ... 270s Selecting previously unselected package libcommons-compress-java. 270s Preparing to unpack .../104-libcommons-compress-java_1.25.0-1_all.deb ... 270s Unpacking libcommons-compress-java (1.25.0-1) ... 270s Selecting previously unselected package libcommons-jexl2-java. 270s Preparing to unpack .../105-libcommons-jexl2-java_2.1.1-6_all.deb ... 270s Unpacking libcommons-jexl2-java (2.1.1-6) ... 270s Selecting previously unselected package libmjson-java. 270s Preparing to unpack .../106-libmjson-java_1.4.0-3_all.deb ... 270s Unpacking libmjson-java (1.4.0-3) ... 270s Selecting previously unselected package libmbedcrypto7t64:arm64. 270s Preparing to unpack .../107-libmbedcrypto7t64_2.28.8-1_arm64.deb ... 270s Unpacking libmbedcrypto7t64:arm64 (2.28.8-1) ... 270s Selecting previously unselected package libmbedx509-1t64:arm64. 270s Preparing to unpack .../108-libmbedx509-1t64_2.28.8-1_arm64.deb ... 270s Unpacking libmbedx509-1t64:arm64 (2.28.8-1) ... 270s Selecting previously unselected package libmbedtls14t64:arm64. 270s Preparing to unpack .../109-libmbedtls14t64_2.28.8-1_arm64.deb ... 270s Unpacking libmbedtls14t64:arm64 (2.28.8-1) ... 270s Selecting previously unselected package ncbi-vdb-data. 270s Preparing to unpack .../110-ncbi-vdb-data_3.0.2+dfsg-2build2_all.deb ... 270s Unpacking ncbi-vdb-data (3.0.2+dfsg-2build2) ... 270s Selecting previously unselected package libncbi-vdb3:arm64. 270s Preparing to unpack .../111-libncbi-vdb3_3.0.2+dfsg-2build2_arm64.deb ... 270s Unpacking libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 270s Selecting previously unselected package libncbi-ngs3:arm64. 270s Preparing to unpack .../112-libncbi-ngs3_3.0.3+dfsg-9ubuntu1_arm64.deb ... 270s Unpacking libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 270s Selecting previously unselected package libngs-jni:arm64. 270s Preparing to unpack .../113-libngs-jni_3.0.3+dfsg-9ubuntu1_arm64.deb ... 270s Unpacking libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 270s Selecting previously unselected package libngs-java:arm64. 271s Preparing to unpack .../114-libngs-java_3.0.3+dfsg-9ubuntu1_arm64.deb ... 271s Unpacking libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 271s Selecting previously unselected package librhino-java. 271s Preparing to unpack .../115-librhino-java_1.7.15-1_all.deb ... 271s Unpacking librhino-java (1.7.15-1) ... 271s Selecting previously unselected package libsnappy1v5:arm64. 271s Preparing to unpack .../116-libsnappy1v5_1.2.1-1_arm64.deb ... 271s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 271s Selecting previously unselected package libsnappy-jni. 271s Preparing to unpack .../117-libsnappy-jni_1.1.10.5-2_arm64.deb ... 271s Unpacking libsnappy-jni (1.1.10.5-2) ... 271s Selecting previously unselected package libsnappy-java. 271s Preparing to unpack .../118-libsnappy-java_1.1.10.5-2_all.deb ... 271s Unpacking libsnappy-java (1.1.10.5-2) ... 271s Selecting previously unselected package libhtsjdk-java. 271s Preparing to unpack .../119-libhtsjdk-java_4.1.0+dfsg-2_all.deb ... 271s Unpacking libhtsjdk-java (4.1.0+dfsg-2) ... 271s Selecting previously unselected package libjheatchart-java. 271s Preparing to unpack .../120-libjheatchart-java_0.6-1.1_all.deb ... 271s Unpacking libjheatchart-java (0.6-1.1) ... 271s Selecting previously unselected package chromhmm. 271s Preparing to unpack .../121-chromhmm_1.25+dfsg-1_all.deb ... 271s Unpacking chromhmm (1.25+dfsg-1) ... 271s Selecting previously unselected package chromhmm-example. 271s Preparing to unpack .../122-chromhmm-example_1.25+dfsg-1_all.deb ... 271s Unpacking chromhmm-example (1.25+dfsg-1) ... 271s Selecting previously unselected package autopkgtest-satdep. 271s Preparing to unpack .../123-2-autopkgtest-satdep.deb ... 271s Unpacking autopkgtest-satdep (0) ... 271s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 271s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ... 271s Setting up liblcms2-2:arm64 (2.14-2build1) ... 271s Setting up libpixman-1-0:arm64 (0.42.2-1build1) ... 271s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 271s Setting up libwayland-server0:arm64 (1.23.0-1) ... 271s Setting up libx11-xcb1:arm64 (2:1.8.7-1build1) ... 271s Setting up libxdamage1:arm64 (1:1.1.6-1build1) ... 271s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ... 271s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 271s Setting up hicolor-icon-theme (0.18-1) ... 271s Setting up libxi6:arm64 (2:1.8.2-1) ... 271s Setting up libmbedcrypto7t64:arm64 (2.28.8-1) ... 271s Setting up java-common (0.76) ... 271s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 271s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 271s Setting up libxcb-render0:arm64 (1.17.0-2) ... 271s Setting up libdrm-radeon1:arm64 (2.4.122-1) ... 271s Setting up libglvnd0:arm64 (1.7.0-1build1) ... 271s Setting up libmjson-java (1.4.0-3) ... 271s Setting up libxcb-glx0:arm64 (1.17.0-2) ... 271s Setting up unzip (6.0-28ubuntu6) ... 271s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 271s Setting up x11-common (1:7.7+23ubuntu3) ... 272s Setting up libdeflate0:arm64 (1.21-1) ... 272s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 272s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 272s Setting up libcolord2:arm64 (1.4.7-1build2) ... 272s Setting up libxxf86vm1:arm64 (1:1.1.4-1build4) ... 272s Setting up libsnappy1v5:arm64 (1.2.1-1) ... 272s Setting up libxcb-present0:arm64 (1.17.0-2) ... 272s Setting up libdconf1:arm64 (0.40.0-4build2) ... 272s Setting up libasound2-data (1.2.12-1) ... 272s Setting up chromhmm-example (1.25+dfsg-1) ... 272s Setting up librhino-java (1.7.15-1) ... 272s Setting up libasound2t64:arm64 (1.2.12-1) ... 272s Setting up libepoxy0:arm64 (1.5.10-1build1) ... 272s Setting up libxfixes3:arm64 (1:6.0.0-2build1) ... 272s Setting up libxcb-sync1:arm64 (1.17.0-2) ... 272s Setting up libapache-pom-java (33-2) ... 272s Setting up libavahi-common-data:arm64 (0.8-13ubuntu6) ... 272s Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... 272s Setting up libxinerama1:arm64 (2:1.1.4-3build1) ... 272s Setting up fonts-dejavu-mono (2.37-8) ... 272s Setting up libxrandr2:arm64 (2:1.5.4-1) ... 272s Setting up fonts-dejavu-core (2.37-8) ... 272s Setting up libpcsclite1:arm64 (2.3.0-1) ... 272s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 272s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 272s Setting up libvulkan1:arm64 (1.3.290.0-1) ... 272s Setting up libwebp7:arm64 (1.4.0-0.1) ... 272s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ... 272s Setting up libgif7:arm64 (5.2.2-1ubuntu1) ... 272s Setting up libxshmfence1:arm64 (1.3-1build5) ... 272s Setting up at-spi2-common (2.54.0-1) ... 272s Setting up libxcb-randr0:arm64 (1.17.0-2) ... 272s Setting up libxml-commons-external-java (1.4.01-6) ... 272s Setting up libharfbuzz0b:arm64 (9.0.0-1) ... 272s Setting up ncbi-vdb-data (3.0.2+dfsg-2build2) ... 272s Setting up libthai-data (0.1.29-2build1) ... 272s Setting up libwayland-egl1:arm64 (1.23.0-1) ... 272s Setting up ca-certificates-java (20240118) ... 272s No JRE found. Skipping Java certificates setup. 272s Setting up libjheatchart-java (0.6-1.1) ... 272s Setting up libjaxp1.3-java (1.3.05-6) ... 272s Setting up libsnappy-jni (1.1.10.5-2) ... 272s Setting up libxcomposite1:arm64 (1:0.4.5-1build3) ... 272s Setting up libdrm-amdgpu1:arm64 (2.4.122-1) ... 272s Setting up libwayland-client0:arm64 (1.23.0-1) ... 272s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 272s Setting up mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 272s Setting up libmbedx509-1t64:arm64 (2.28.8-1) ... 272s Setting up java-wrappers (0.5) ... 272s Setting up libatk1.0-0t64:arm64 (2.54.0-1) ... 272s Setting up openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 272s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode 272s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 272s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 272s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 272s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 272s Setting up libgbm1:arm64 (24.2.3-1ubuntu1) ... 272s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 272s Setting up libxtst6:arm64 (2:1.2.3-1.1build1) ... 272s Setting up libxcursor1:arm64 (1:1.2.2-1) ... 272s Setting up libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 272s Setting up libcommons-parent-java (56-1) ... 272s Setting up libavahi-common3:arm64 (0.8-13ubuntu6) ... 272s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 272s Setting up dconf-service (0.40.0-4build2) ... 272s Setting up libcommons-jexl2-java (2.1.1-6) ... 272s Setting up libthai0:arm64 (0.1.29-2build1) ... 272s Setting up libmbedtls14t64:arm64 (2.28.8-1) ... 272s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 272s Setting up libwayland-cursor0:arm64 (1.23.0-1) ... 272s Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 272s Setting up libsnappy-java (1.1.10.5-2) ... 272s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 272s Setting up libavahi-client3:arm64 (0.8-13ubuntu6) ... 272s Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 272s Setting up gtk-update-icon-cache (4.16.2+ds-2) ... 272s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 274s Regenerating fonts cache... done. 274s Setting up libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 274s Setting up libglx0:arm64 (1.7.0-1build1) ... 274s Setting up dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 274s Setting up libcommons-compress-java (1.25.0-1) ... 274s Setting up libcommons-io-java (2.16.1-1) ... 274s Setting up libpango-1.0-0:arm64 (1.54.0+ds-2) ... 274s Setting up libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 274s Setting up libxmlgraphics-commons-java (2.8-2) ... 274s Setting up libcairo2:arm64 (1.18.2-2) ... 274s Setting up libgl1:arm64 (1.7.0-1build1) ... 274s Setting up libcairo-gobject2:arm64 (1.18.2-2) ... 274s Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 274s Setting up libcups2t64:arm64 (2.4.10-1ubuntu2) ... 274s Setting up libgtk-3-common (3.24.43-3ubuntu2) ... 274s Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 274s Setting up libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 274s Setting up libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 274s Setting up libbatik-java (1.17+dfsg-1) ... 274s Setting up libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 274s Setting up libhtsjdk-java (4.1.0+dfsg-2) ... 274s Setting up adwaita-icon-theme (47.0-1) ... 274s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 274s Setting up humanity-icon-theme (0.6.16) ... 274s Setting up ubuntu-mono (24.04-0ubuntu1) ... 274s Processing triggers for man-db (2.12.1-3) ... 275s Processing triggers for libglib2.0-0t64:arm64 (2.82.1-0ubuntu1) ... 275s Setting up libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 275s Processing triggers for libc-bin (2.40-1ubuntu3) ... 275s Processing triggers for ca-certificates-java (20240118) ... 276s Adding debian:ACCVRAIZ1.pem 276s Adding debian:AC_RAIZ_FNMT-RCM.pem 276s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 276s Adding debian:ANF_Secure_Server_Root_CA.pem 276s Adding debian:Actalis_Authentication_Root_CA.pem 276s Adding debian:AffirmTrust_Commercial.pem 276s Adding debian:AffirmTrust_Networking.pem 276s Adding debian:AffirmTrust_Premium.pem 276s Adding debian:AffirmTrust_Premium_ECC.pem 276s Adding debian:Amazon_Root_CA_1.pem 276s Adding debian:Amazon_Root_CA_2.pem 276s Adding debian:Amazon_Root_CA_3.pem 276s Adding debian:Amazon_Root_CA_4.pem 276s Adding debian:Atos_TrustedRoot_2011.pem 276s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 276s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 276s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 276s Adding debian:BJCA_Global_Root_CA1.pem 276s Adding debian:BJCA_Global_Root_CA2.pem 276s Adding debian:Baltimore_CyberTrust_Root.pem 276s Adding debian:Buypass_Class_2_Root_CA.pem 276s Adding debian:Buypass_Class_3_Root_CA.pem 276s Adding debian:CA_Disig_Root_R2.pem 276s Adding debian:CFCA_EV_ROOT.pem 276s Adding debian:COMODO_Certification_Authority.pem 276s Adding debian:COMODO_ECC_Certification_Authority.pem 276s Adding debian:COMODO_RSA_Certification_Authority.pem 276s Adding debian:Certainly_Root_E1.pem 276s Adding debian:Certainly_Root_R1.pem 276s Adding debian:Certigna.pem 276s Adding debian:Certigna_Root_CA.pem 276s Adding debian:Certum_EC-384_CA.pem 276s Adding debian:Certum_Trusted_Network_CA.pem 276s Adding debian:Certum_Trusted_Network_CA_2.pem 276s Adding debian:Certum_Trusted_Root_CA.pem 276s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 276s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 276s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 276s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 276s Adding debian:Comodo_AAA_Services_root.pem 276s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 276s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 276s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 276s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 276s Adding debian:DigiCert_Assured_ID_Root_CA.pem 276s Adding debian:DigiCert_Assured_ID_Root_G2.pem 276s Adding debian:DigiCert_Assured_ID_Root_G3.pem 276s Adding debian:DigiCert_Global_Root_CA.pem 276s Adding debian:DigiCert_Global_Root_G2.pem 276s Adding debian:DigiCert_Global_Root_G3.pem 276s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 276s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 276s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 276s Adding debian:DigiCert_Trusted_Root_G4.pem 276s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 276s Adding debian:Entrust_Root_Certification_Authority.pem 276s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 276s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 276s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 276s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 276s Adding debian:GLOBALTRUST_2020.pem 276s Adding debian:GTS_Root_R1.pem 276s Adding debian:GTS_Root_R2.pem 276s Adding debian:GTS_Root_R3.pem 276s Adding debian:GTS_Root_R4.pem 276s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 276s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 276s Adding debian:GlobalSign_Root_CA.pem 276s Adding debian:GlobalSign_Root_CA_-_R3.pem 276s Adding debian:GlobalSign_Root_CA_-_R6.pem 276s Adding debian:GlobalSign_Root_E46.pem 276s Adding debian:GlobalSign_Root_R46.pem 276s Adding debian:Go_Daddy_Class_2_CA.pem 276s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 276s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 276s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 276s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 276s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 276s Adding debian:HiPKI_Root_CA_-_G1.pem 276s Adding debian:Hongkong_Post_Root_CA_3.pem 276s Adding debian:ISRG_Root_X1.pem 276s Adding debian:ISRG_Root_X2.pem 276s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 276s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 276s Adding debian:Izenpe.com.pem 276s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 276s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 276s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 276s Adding debian:NAVER_Global_Root_Certification_Authority.pem 276s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 276s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 276s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 276s Adding debian:QuoVadis_Root_CA_1_G3.pem 276s Adding debian:QuoVadis_Root_CA_2.pem 276s Adding debian:QuoVadis_Root_CA_2_G3.pem 276s Adding debian:QuoVadis_Root_CA_3.pem 276s Adding debian:QuoVadis_Root_CA_3_G3.pem 276s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 276s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 276s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 276s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 276s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 276s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 276s Adding debian:SZAFIR_ROOT_CA2.pem 276s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 276s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 276s Adding debian:SecureSign_RootCA11.pem 276s Adding debian:SecureTrust_CA.pem 276s Adding debian:Secure_Global_CA.pem 276s Adding debian:Security_Communication_ECC_RootCA1.pem 276s Adding debian:Security_Communication_RootCA2.pem 276s Adding debian:Security_Communication_RootCA3.pem 276s Adding debian:Security_Communication_Root_CA.pem 276s Adding debian:Starfield_Class_2_CA.pem 276s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 276s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 276s Adding debian:SwissSign_Gold_CA_-_G2.pem 276s Adding debian:SwissSign_Silver_CA_-_G2.pem 276s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 276s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 276s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 276s Adding debian:TWCA_Global_Root_CA.pem 276s Adding debian:TWCA_Root_Certification_Authority.pem 276s Adding debian:TeliaSonera_Root_CA_v1.pem 276s Adding debian:Telia_Root_CA_v2.pem 276s Adding debian:TrustAsia_Global_Root_CA_G3.pem 276s Adding debian:TrustAsia_Global_Root_CA_G4.pem 276s Adding debian:Trustwave_Global_Certification_Authority.pem 276s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 276s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 276s Adding debian:TunTrust_Root_CA.pem 276s Adding debian:UCA_Extended_Validation_Root.pem 276s Adding debian:UCA_Global_G2_Root.pem 276s Adding debian:USERTrust_ECC_Certification_Authority.pem 276s Adding debian:USERTrust_RSA_Certification_Authority.pem 276s Adding debian:XRamp_Global_CA_Root.pem 276s Adding debian:certSIGN_ROOT_CA.pem 276s Adding debian:certSIGN_Root_CA_G2.pem 276s Adding debian:e-Szigno_Root_CA_2017.pem 276s Adding debian:ePKI_Root_Certification_Authority.pem 276s Adding debian:emSign_ECC_Root_CA_-_C3.pem 276s Adding debian:emSign_ECC_Root_CA_-_G3.pem 276s Adding debian:emSign_Root_CA_-_C1.pem 276s Adding debian:emSign_Root_CA_-_G1.pem 276s Adding debian:vTrus_ECC_Root_CA.pem 276s Adding debian:vTrus_Root_CA.pem 276s done. 276s Setting up openjdk-21-jre:arm64 (21.0.5+11-1) ... 276s Setting up default-jre-headless (2:1.21-76) ... 276s Setting up chromhmm (1.25+dfsg-1) ... 276s Setting up autopkgtest-satdep (0) ... 276s Setting up default-jre (2:1.21-76) ... 283s (Reading database ... 94754 files and directories currently installed.) 283s Removing autopkgtest-satdep (0) ... 291s autopkgtest [19:08:32]: test chromhmm-run-sample-analysis: [----------------------- 291s This is Version 1.25 of ChromHMM (c) Copyright 2008-2012 Massachusetts Institute of Technology 291s Need to specify the mode BinarizeBam|BinarizeBed|BinarizeSignal|CompareModels|ConvertGeneTable|EvalSubset|LearnModel|MakeBrowserFiles|MakeSegmentation|MergeBinary|NeighborhoodEnrichment|StatePruning|OverlapEnrichment|Reorder|Version 291s autopkgtest [19:08:32]: test chromhmm-run-sample-analysis: -----------------------] 292s chromhmm-run-sample-analysis PASS 292s autopkgtest [19:08:33]: test chromhmm-run-sample-analysis: - - - - - - - - - - results - - - - - - - - - - 292s autopkgtest [19:08:33]: test drop-seq-run-unit-test: preparing testbed 368s autopkgtest [19:09:49]: testbed dpkg architecture: arm64 368s autopkgtest [19:09:49]: testbed apt version: 2.9.8 368s autopkgtest [19:09:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 370s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 370s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [44.0 kB] 370s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 370s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2775 kB] 371s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [183 kB] 371s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [241 kB] 371s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 371s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [2023 kB] 371s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [36.5 kB] 371s Fetched 5433 kB in 1s (3786 kB/s) 371s Reading package lists... 375s Reading package lists... 376s Building dependency tree... 376s Reading state information... 377s Calculating upgrade... 378s The following packages will be upgraded: 378s libevdev2 libftdi1-2 libinih1 nano python3-lazr.uri 378s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 378s Need to get 374 kB of archives. 378s After this operation, 17.4 kB of additional disk space will be used. 378s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libevdev2 arm64 1.13.3+dfsg-1 [36.0 kB] 378s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 nano arm64 8.2-1 [289 kB] 378s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libftdi1-2 arm64 1.5-7 [28.4 kB] 378s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libinih1 arm64 58-1ubuntu1 [7412 B] 378s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lazr.uri all 1.0.6-4 [13.6 kB] 379s Fetched 374 kB in 0s (904 kB/s) 379s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 379s Preparing to unpack .../libevdev2_1.13.3+dfsg-1_arm64.deb ... 379s Unpacking libevdev2:arm64 (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 379s Preparing to unpack .../archives/nano_8.2-1_arm64.deb ... 379s Unpacking nano (8.2-1) over (8.1-1) ... 379s Preparing to unpack .../libftdi1-2_1.5-7_arm64.deb ... 379s Unpacking libftdi1-2:arm64 (1.5-7) over (1.5-6build5) ... 379s Preparing to unpack .../libinih1_58-1ubuntu1_arm64.deb ... 379s Unpacking libinih1:arm64 (58-1ubuntu1) over (55-1ubuntu2) ... 379s Preparing to unpack .../python3-lazr.uri_1.0.6-4_all.deb ... 380s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 380s Setting up libinih1:arm64 (58-1ubuntu1) ... 380s Setting up python3-lazr.uri (1.0.6-4) ... 380s Setting up libftdi1-2:arm64 (1.5-7) ... 380s Setting up nano (8.2-1) ... 380s Setting up libevdev2:arm64 (1.13.3+dfsg-1) ... 380s Processing triggers for man-db (2.12.1-3) ... 381s Processing triggers for install-info (7.1.1-1) ... 381s Processing triggers for libc-bin (2.40-1ubuntu3) ... 381s Reading package lists... 382s Building dependency tree... 382s Reading state information... 383s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 383s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 383s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 383s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 383s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 385s Reading package lists... 385s Reading package lists... 385s Building dependency tree... 385s Reading state information... 386s Calculating upgrade... 387s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 387s Reading package lists... 388s Building dependency tree... 388s Reading state information... 389s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 400s Reading package lists... 400s Building dependency tree... 400s Reading state information... 401s Starting pkgProblemResolver with broken count: 0 401s Starting 2 pkgProblemResolver with broken count: 0 401s Done 402s The following additional packages will be installed: 402s adwaita-icon-theme ant ant-optional at-spi2-common ca-certificates-java 402s dconf-gsettings-backend dconf-service default-jre default-jre-headless 402s drop-seq-testdata drop-seq-tools fontconfig fontconfig-config 402s fonts-dejavu-core fonts-dejavu-mono gtk-update-icon-cache hicolor-icon-theme 402s humanity-icon-theme java-common java-wrappers libactivation-java 402s libantlr4-runtime-java libaopalliance-java libapache-pom-java 402s libapfloat-java libargs4j-java libasm-java libasound2-data libasound2t64 402s libatinject-jsr330-api-java libatk-bridge2.0-0t64 libatk1.0-0t64 402s libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 402s libbarclay-java libbiojava6-java libcairo-gobject2 libcairo2 libcdi-api-java 402s libciftools-java libcodemodel-java libcolord2 libcommons-cli-java 402s libcommons-codec-java libcommons-collections4-java libcommons-compress-java 402s libcommons-exec-java libcommons-io-java libcommons-jexl2-java 402s libcommons-lang-java libcommons-lang3-java libcommons-logging-java 402s libcommons-math-java libcommons-math3-java libcommons-parent-java 402s libcommons-text-java libcups2t64 libdatrie1 libdconf1 libdeflate0 402s libdom4j-java libdrm-amdgpu1 libdrm-radeon1 libdtd-parser-java libepoxy0 402s liberror-prone-java libexec-maven-plugin-java libfastinfoset-java 402s libfastutil-java libfontconfig1 libfreemarker-java 402s libgatk-native-bindings-java libgbm1 libgdk-pixbuf-2.0-0 402s libgdk-pixbuf2.0-common libgeronimo-annotation-1.3-spec-java 402s libgeronimo-interceptor-3.0-spec-java libgif7 libgkl-java libgl1 402s libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 402s libgoogle-gson-java libgraphite2-3 libgtk-3-0t64 libgtk-3-common 402s libguava-java libguice-java libharfbuzz0b libhts3t64 libhtscodecs2 402s libhtsjdk-java libhttpclient-java libhttpcore-java libinchi1 402s libistack-commons-java libitext5-java libjackson2-annotations-java 402s libjackson2-core-java libjackson2-databind-java libjaxb-api-java 402s libjaxb-java libjaxen-java libjbig0 libjgrapht-java libjgraphx-java 402s libjheaps-java libjmol-java libjni-inchi-java libjni-inchi-jni 402s libjoptsimple-java libjpeg-turbo8 libjpeg8 libjson-simple-java libjsoup-java 402s libjsr305-java libla4j-java liblcms2-2 liblerc4 liblightcouch-java 402s liblog4j1.2-java liblog4j2-java libmaven-archiver-java 402s libmaven-compiler-plugin-java libmaven-file-management-java 402s libmaven-jar-plugin-java libmaven-parent-java libmaven-resolver-java 402s libmaven-shared-incremental-java libmaven-shared-io-java 402s libmaven-shared-utils-java libmaven3-core-java libmbedcrypto7t64 402s libmbedtls14t64 libmbedx509-1t64 libmjson-java libmmtf-java libmongodb-java 402s libmsgpack-java libnaga-java libncbi-ngs3 libncbi-vdb3 libngs-java 402s libngs-jni libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 402s libpicard-java libpixman-1-0 libplexus-archiver-java libplexus-cipher-java 402s libplexus-classworlds-java libplexus-compiler-java 402s libplexus-component-annotations-java libplexus-container-default-java 402s libplexus-interpolation-java libplexus-io-java libplexus-languages-java 402s libplexus-sec-dispatcher-java libplexus-utils2-java libqdox2-java 402s librelaxng-datatype-java librhino-java librngom-java libsharpyuv0 402s libsisu-inject-java libsisu-plexus-java libslf4j-java libsnappy-java 402s libsnappy-jni libsnappy1v5 libstax-ex-java libstreambuffer-java libthai-data 402s libthai0 libtiff6 libtxw2-java libvecmath-java libvulkan1 libwagon-http-java 402s libwagon-provider-api-java libwayland-client0 libwayland-cursor0 402s libwayland-egl1 libwayland-server0 libwebp7 libx11-xcb1 402s libxbean-reflect-java libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 402s libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 402s libxcb-xfixes0 libxcomposite1 libxcursor1 libxdamage1 libxerces2-java 402s libxfixes3 libxi6 libxinerama1 libxml-commons-external-java 402s libxml-commons-resolver1.1-java libxrandr2 libxrender1 libxshmfence1 402s libxsom-java libxtst6 libxxf86vm1 libxz-java libyaml-snake-java 402s mesa-libgallium ncbi-vdb-data openjdk-21-jre openjdk-21-jre-headless 402s picard-tools samtools ubuntu-mono unzip x11-common 402s Suggested packages: 402s ant-doc default-jdk | java-compiler | java-sdk antlr javacc junit junit4 402s jython libbcel-java libbsf-java libcommons-net-java libmail-java 402s libjaxp1.3-java libjdepend-java libjsch-java liboro-java libregexp-java 402s libxalan2-java alsa-utils libasound2-plugins libatinject-jsr330-api-java-doc 402s libbiojava6-java-doc libel-api-java colord libcommons-collections4-java-doc 402s libcommons-lang-java-doc libavalon-framework-java libexcalibur-logkit-java 402s cups-common libmsv-java libxpp2-java libxpp3-java libjdom1-java 402s libgoogle-gson-java-doc gvfs libcglib-java libbcpkix-java libbcprov-java 402s libxml-security-java libjackson2-annotations-java-doc libxom-java 402s libjmol-java-doc libjoptsimple-java-doc libjson-simple-doc libjsoup-java-doc 402s libjsr305-java-doc liblcms2-utils liblog4j1.2-java-doc libcommons-csv-java 402s libconversant-disruptor-java libdisruptor-java libgeronimo-jms-1.1-spec-java 402s libjackson2-dataformat-xml-java libjackson2-dataformat-yaml libjansi-java 402s libjctools-java libjeromq-java libwoodstox-java 402s libmaven-file-management-java-doc libmaven-shared-utils-java-doc 402s liblogback-java libmmtf-java-doc libngs-java-doc pcscd 402s libeclipse-jdt-core-java libplexus-utils2-java-doc rhino testng 402s libxerces2-java-doc libxml-commons-resolver1.1-java-doc libnss-mdns 402s fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho 402s fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic cwltool zip 402s Recommended packages: 402s librsvg2-common alsa-ucm-conf alsa-topology-conf at-spi2-core 402s libgdk-pixbuf2.0-bin libgkl-jni libgl1-amber-dri libgtk-3-bin libjansi-java 402s r-base-core mesa-vulkan-drivers | vulkan-icd libatk-wrapper-java-jni 402s fonts-dejavu-extra 402s The following NEW packages will be installed: 402s adwaita-icon-theme ant ant-optional at-spi2-common autopkgtest-satdep 402s ca-certificates-java dconf-gsettings-backend dconf-service default-jre 402s default-jre-headless drop-seq-testdata drop-seq-tools fontconfig 402s fontconfig-config fonts-dejavu-core fonts-dejavu-mono gtk-update-icon-cache 402s hicolor-icon-theme humanity-icon-theme java-common java-wrappers 402s libactivation-java libantlr4-runtime-java libaopalliance-java 402s libapache-pom-java libapfloat-java libargs4j-java libasm-java 402s libasound2-data libasound2t64 libatinject-jsr330-api-java 402s libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 402s libavahi-common-data libavahi-common3 libbarclay-java libbiojava6-java 402s libcairo-gobject2 libcairo2 libcdi-api-java libciftools-java 402s libcodemodel-java libcolord2 libcommons-cli-java libcommons-codec-java 402s libcommons-collections4-java libcommons-compress-java libcommons-exec-java 402s libcommons-io-java libcommons-jexl2-java libcommons-lang-java 402s libcommons-lang3-java libcommons-logging-java libcommons-math-java 402s libcommons-math3-java libcommons-parent-java libcommons-text-java 402s libcups2t64 libdatrie1 libdconf1 libdeflate0 libdom4j-java libdrm-amdgpu1 402s libdrm-radeon1 libdtd-parser-java libepoxy0 liberror-prone-java 402s libexec-maven-plugin-java libfastinfoset-java libfastutil-java 402s libfontconfig1 libfreemarker-java libgatk-native-bindings-java libgbm1 402s libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common 402s libgeronimo-annotation-1.3-spec-java libgeronimo-interceptor-3.0-spec-java 402s libgif7 libgkl-java libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 402s libglx-mesa0 libglx0 libgoogle-gson-java libgraphite2-3 libgtk-3-0t64 402s libgtk-3-common libguava-java libguice-java libharfbuzz0b libhts3t64 402s libhtscodecs2 libhtsjdk-java libhttpclient-java libhttpcore-java libinchi1 402s libistack-commons-java libitext5-java libjackson2-annotations-java 402s libjackson2-core-java libjackson2-databind-java libjaxb-api-java 402s libjaxb-java libjaxen-java libjbig0 libjgrapht-java libjgraphx-java 402s libjheaps-java libjmol-java libjni-inchi-java libjni-inchi-jni 402s libjoptsimple-java libjpeg-turbo8 libjpeg8 libjson-simple-java libjsoup-java 402s libjsr305-java libla4j-java liblcms2-2 liblerc4 liblightcouch-java 402s liblog4j1.2-java liblog4j2-java libmaven-archiver-java 402s libmaven-compiler-plugin-java libmaven-file-management-java 402s libmaven-jar-plugin-java libmaven-parent-java libmaven-resolver-java 402s libmaven-shared-incremental-java libmaven-shared-io-java 402s libmaven-shared-utils-java libmaven3-core-java libmbedcrypto7t64 402s libmbedtls14t64 libmbedx509-1t64 libmjson-java libmmtf-java libmongodb-java 402s libmsgpack-java libnaga-java libncbi-ngs3 libncbi-vdb3 libngs-java 402s libngs-jni libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 402s libpicard-java libpixman-1-0 libplexus-archiver-java libplexus-cipher-java 402s libplexus-classworlds-java libplexus-compiler-java 402s libplexus-component-annotations-java libplexus-container-default-java 402s libplexus-interpolation-java libplexus-io-java libplexus-languages-java 402s libplexus-sec-dispatcher-java libplexus-utils2-java libqdox2-java 402s librelaxng-datatype-java librhino-java librngom-java libsharpyuv0 402s libsisu-inject-java libsisu-plexus-java libslf4j-java libsnappy-java 402s libsnappy-jni libsnappy1v5 libstax-ex-java libstreambuffer-java libthai-data 402s libthai0 libtiff6 libtxw2-java libvecmath-java libvulkan1 libwagon-http-java 402s libwagon-provider-api-java libwayland-client0 libwayland-cursor0 402s libwayland-egl1 libwayland-server0 libwebp7 libx11-xcb1 402s libxbean-reflect-java libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 402s libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 402s libxcb-xfixes0 libxcomposite1 libxcursor1 libxdamage1 libxerces2-java 402s libxfixes3 libxi6 libxinerama1 libxml-commons-external-java 402s libxml-commons-resolver1.1-java libxrandr2 libxrender1 libxshmfence1 402s libxsom-java libxtst6 libxxf86vm1 libxz-java libyaml-snake-java 402s mesa-libgallium ncbi-vdb-data openjdk-21-jre openjdk-21-jre-headless 402s picard-tools samtools ubuntu-mono unzip x11-common 402s 0 upgraded, 230 newly installed, 0 to remove and 0 not upgraded. 402s Need to get 301 MB/301 MB of archives. 402s After this operation, 590 MB of additional disk space will be used. 402s Get:1 /tmp/autopkgtest.d7OWAi/3-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [724 B] 402s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 402s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 402s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 402s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.21-1 [46.2 kB] 402s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 402s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 402s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 402s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 402s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 402s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1 [145 kB] 402s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 gtk-update-icon-cache arm64 4.16.2+ds-2 [51.1 kB] 402s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 hicolor-icon-theme all 0.18-1 [13.5 kB] 402s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 humanity-icon-theme all 0.6.16 [1282 kB] 402s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 ubuntu-mono all 24.04-0ubuntu1 [151 kB] 402s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 adwaita-icon-theme all 47.0-1 [525 kB] 402s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 ca-certificates-java all 20240118 [11.6 kB] 402s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 java-common all 0.76 [6852 B] 402s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.14-2build1 [161 kB] 402s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcsclite1 arm64 2.3.0-1 [24.4 kB] 402s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre-headless arm64 21.0.5+11-1 [45.7 MB] 404s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre-headless arm64 2:1.21-76 [3176 B] 404s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 ant all 1.10.14-1 [2147 kB] 404s Get:24 http://ftpmaster.internal/ubuntu plucky/universe arm64 ant-optional all 1.10.14-1 [451 kB] 404s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 at-spi2-common all 2.54.0-1 [8774 B] 404s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libdconf1 arm64 0.40.0-4build2 [39.8 kB] 404s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-service arm64 0.40.0-4build2 [26.9 kB] 404s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-gsettings-backend arm64 0.40.0-4build2 [22.0 kB] 404s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [55.0 kB] 404s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 404s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [80.2 kB] 404s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [66.6 kB] 404s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 404s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 404s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 404s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 404s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.42.2-1build1 [204 kB] 404s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 404s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 404s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 404s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 404s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo-gobject2 arm64 1.18.2-2 [127 kB] 404s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolord2 arm64 1.4.7-1build2 [149 kB] 404s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common-data arm64 0.8-13ubuntu6 [29.6 kB] 404s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common3 arm64 0.8-13ubuntu6 [23.3 kB] 404s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-client3 arm64 0.8-13ubuntu6 [27.2 kB] 404s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libcups2t64 arm64 2.4.10-1ubuntu2 [271 kB] 404s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libepoxy0 arm64 1.5.10-1build1 [240 kB] 404s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 404s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 9.0.0-1 [486 kB] 404s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 404s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 404s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 404s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 404s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-2 [233 kB] 404s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-2 [48.8 kB] 404s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-2 [27.5 kB] 404s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB] 404s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-cursor0 arm64 1.23.0-1 [10.6 kB] 404s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-egl1 arm64 1.23.0-1 [5636 B] 404s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcomposite1 arm64 1:0.4.5-1build3 [6336 B] 404s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB] 404s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcursor1 arm64 1:1.2.2-1 [21.2 kB] 404s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libxdamage1 arm64 1:1.1.6-1build1 [6236 B] 404s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libxinerama1 arm64 2:1.1.4-3build1 [6394 B] 404s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrandr2 arm64 2:1.5.4-1 [19.6 kB] 404s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-common all 3.24.43-3ubuntu2 [1202 kB] 404s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-0t64 arm64 3.24.43-3ubuntu2 [2898 kB] 404s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB] 404s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB] 404s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.7-1build1 [7870 B] 404s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B] 404s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B] 404s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB] 404s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B] 404s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB] 404s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B] 404s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB] 404s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B] 404s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B] 404s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.122-1 [20.9 kB] 404s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.122-1 [20.8 kB] 404s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB] 405s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.290.0-1 [153 kB] 405s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB] 405s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB] 405s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB] 405s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB] 405s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB] 405s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB] 405s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2-data all 1.2.12-1 [21.0 kB] 405s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2t64 arm64 1.2.12-1 [384 kB] 405s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 405s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 405s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 libxtst6 arm64 2:1.2.3-1.1build1 [13.0 kB] 405s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre arm64 21.0.5+11-1 [221 kB] 405s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre arm64 2:1.21-76 [918 B] 405s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 drop-seq-testdata all 3.0.0+dfsg-1 [143 MB] 410s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapache-pom-java all 33-2 [5874 B] 410s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-parent-java all 56-1 [10.7 kB] 410s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-lang3-java all 3.14.0-1 [586 kB] 410s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfreemarker-java all 2.3.32-2 [1542 kB] 411s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgoogle-gson-java all 2.10.1-1 [252 kB] 411s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjoptsimple-java all 5.0.4-4 [73.1 kB] 411s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-codec-java all 1.16.0-1 [306 kB] 411s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 411s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhttpcore-java all 4.4.16-1 [612 kB] 411s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhttpclient-java all 4.5.14-1 [1241 kB] 411s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblightcouch-java all 0.2.0-1 [74.2 kB] 411s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmongodb-java all 3.6.3-2 [1899 kB] 412s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 libslf4j-java all 1.7.32-1 [141 kB] 412s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblog4j2-java all 2.19.0-2 [2294 kB] 412s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 libbarclay-java all 5.0.0+dfsg-1 [108 kB] 412s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.2 kB] 412s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libciftools-java all 6.0.0-1 [2213 kB] 412s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-math-java all 2.2-8 [921 kB] 412s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 libatinject-jsr330-api-java all 1.0+ds1-5 [5348 B] 412s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 liberror-prone-java all 2.18.0-1 [22.5 kB] 412s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjsr305-java all 0.1~+svn49-11 [27.0 kB] 412s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 libguava-java all 32.0.1-1 [2692 kB] 412s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 libitext5-java all 5.5.13.3-4 [2691 kB] 412s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjackson2-annotations-java all 2.14.0-1 [64.7 kB] 412s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjackson2-core-java all 2.14.1-1 [432 kB] 412s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjackson2-databind-java all 2.14.0-1 [1531 kB] 412s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 libactivation-java all 1.2.0-2 [84.7 kB] 412s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxb-api-java all 2.3.1-1 [119 kB] 412s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 libargs4j-java all 2.33-2 [137 kB] 412s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxen-java all 1.1.6-5 [213 kB] 412s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdom4j-java all 2.1.4-1 [310 kB] 412s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-io-java all 2.16.1-1 [451 kB] 412s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-shared-utils-java all 3.3.4-1 [137 kB] 412s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-cli-java all 1.6.0-1 [59.9 kB] 412s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaopalliance-java all 20070526-7 [8166 B] 412s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 libguice-java all 4.2.3-2 [1434 kB] 412s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-parent-java all 43-2 [6306 B] 412s Get:136 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-utils2-java all 3.4.2-1 [256 kB] 412s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 libwagon-provider-api-java all 3.5.3-1 [47.9 kB] 412s Get:138 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-resolver-java all 1.6.3-1 [544 kB] 412s Get:139 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-cipher-java all 2.0-1 [14.7 kB] 412s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-classworlds-java all 2.7.0-1 [50.0 kB] 413s Get:141 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-component-annotations-java all 2.1.1-1 [6550 B] 413s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-interpolation-java all 1.26-1 [76.8 kB] 413s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-sec-dispatcher-java all 2.0-3 [28.1 kB] 413s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeronimo-interceptor-3.0-spec-java all 1.0.1-4fakesync [8616 B] 413s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcdi-api-java all 1.2-3 [54.3 kB] 413s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsisu-inject-java all 0.3.4-2 [347 kB] 413s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsisu-plexus-java all 0.3.4-3 [181 kB] 413s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven3-core-java all 3.8.8-1 [1572 kB] 413s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-shared-io-java all 3.0.0-4 [32.6 kB] 413s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-file-management-java all 3.0.0-1 [35.1 kB] 413s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-compress-java all 1.25.0-1 [612 kB] 413s Get:152 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-io-java all 3.3.1-2 [64.4 kB] 413s Get:153 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 413s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-jni arm64 1.1.10.5-2 [6618 B] 413s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-java all 1.1.10.5-2 [83.7 kB] 413s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxz-java all 1.9-1 [140 kB] 413s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-archiver-java all 4.6.1-1 [185 kB] 413s Get:158 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjsoup-java all 1.15.3-1 [407 kB] 413s Get:159 http://ftpmaster.internal/ubuntu plucky/universe arm64 libwagon-http-java all 3.5.3-1 [48.8 kB] 413s Get:160 http://ftpmaster.internal/ubuntu plucky/universe arm64 libistack-commons-java all 3.0.6-5 [145 kB] 413s Get:161 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcodemodel-java all 2.6+jaxb2.3.0.1-10.1 [164 kB] 413s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 librelaxng-datatype-java all 1.0+ds1-3.1 [11.8 kB] 413s Get:163 http://ftpmaster.internal/ubuntu plucky/universe arm64 librngom-java all 2.3.0.1-10.1 [289 kB] 413s Get:164 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxsom-java all 2.3.0.1-10.1 [397 kB] 413s Get:165 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtxw2-java all 2.3.0.1-10.1 [133 kB] 413s Get:166 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxml-commons-resolver1.1-java all 1.2-11 [97.6 kB] 413s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdtd-parser-java all 1.2-1 [64.9 kB] 413s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 libstax-ex-java all 1.7.8-3 [40.9 kB] 413s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 libstreambuffer-java all 1.5.4-1.1 [74.0 kB] 413s Get:170 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfastinfoset-java all 1.2.12-3 [343 kB] 413s Get:171 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxb-java all 2.3.0.1-10.1 [1967 kB] 413s Get:172 http://ftpmaster.internal/ubuntu plucky/universe arm64 libantlr4-runtime-java all 4.9.2-2 [308 kB] 413s Get:173 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapfloat-java all 1.13.0-1 [698 kB] 413s Get:174 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-archiver-java all 3.6.2-1 [26.0 kB] 413s Get:175 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-jar-plugin-java all 3.3.0-2 [23.9 kB] 413s Get:176 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-text-java all 1.11.0-1 [215 kB] 413s Get:177 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfastutil-java all 8.5.14+dfsg-1 [20.2 MB] 414s Get:178 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjheaps-java all 0.14-2 [143 kB] 414s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxml-commons-external-java all 1.4.01-6 [240 kB] 414s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxerces2-java all 2.12.2-1 [1430 kB] 414s Get:181 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjgraphx-java all 2.1.0.7-4 [803 kB] 414s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjgrapht-java all 1.5.2-1 [1584 kB] 414s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 libinchi1 arm64 1.03+dfsg-4build1 [451 kB] 414s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjni-inchi-jni arm64 0.8+dfsg-7build1 [10.2 kB] 414s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-exec-java all 1.3-2 [48.1 kB] 414s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 libexec-maven-plugin-java all 3.1.0-2 [66.1 kB] 414s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-shared-incremental-java all 1.1-6 [9898 B] 414s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-lang-java all 2.6-10 [270 kB] 414s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxbean-reflect-java all 4.5-8 [132 kB] 414s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-container-default-java all 2.1.1-1 [191 kB] 414s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-compiler-java all 2.13.0-1 [98.9 kB] 414s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 libasm-java all 9.7-2 [386 kB] 414s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqdox2-java all 2.0.3-1 [296 kB] 414s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-languages-java all 1.1.1-2 [46.8 kB] 414s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-compiler-plugin-java all 3.10.1-2 [58.5 kB] 414s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblog4j1.2-java all 1.2.17-11 [439 kB] 414s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjni-inchi-java all 0.8+dfsg-7build1 [32.6 kB] 414s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnaga-java all 3.0+svn80-5 [43.5 kB] 414s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjmol-java all 16.2.15+dfsg-1 [8680 kB] 415s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjson-simple-java all 2.3.0-1 [61.0 kB] 415s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmsgpack-java all 0.9.6-1 [159 kB] 415s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmmtf-java all 1.0.11-1 [184 kB] 415s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 libvecmath-java all 1.5.2-7 [96.9 kB] 415s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 libbiojava6-java all 6.1.0+dfsg-4 [5330 kB] 416s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-collections4-java all 4.4-2 [670 kB] 416s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-math3-java all 3.6.1-3 [2016 kB] 416s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-jexl2-java all 2.1.1-6 [250 kB] 416s Get:208 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmjson-java all 1.4.0-3 [60.4 kB] 416s Get:209 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedcrypto7t64 arm64 2.28.8-1 [209 kB] 416s Get:210 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedx509-1t64 arm64 2.28.8-1 [47.2 kB] 416s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedtls14t64 arm64 2.28.8-1 [82.2 kB] 416s Get:212 http://ftpmaster.internal/ubuntu plucky/universe arm64 ncbi-vdb-data all 3.0.2+dfsg-2build2 [67.5 kB] 416s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-vdb3 arm64 3.0.2+dfsg-2build2 [1143 kB] 416s Get:214 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-ngs3 arm64 3.0.3+dfsg-9ubuntu1 [145 kB] 416s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-jni arm64 3.0.3+dfsg-9ubuntu1 [4844 B] 416s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-java arm64 3.0.3+dfsg-9ubuntu1 [91.1 kB] 416s Get:217 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 librhino-java all 1.7.15-1 [1354 kB] 416s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtsjdk-java all 4.1.0+dfsg-2 [1823 kB] 416s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 libla4j-java all 0.6.0-4 [224 kB] 416s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgatk-native-bindings-java all 1.0.0+dfsg-2 [8014 B] 416s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgkl-java all 0.8.11+dfsg-2build1 [24.9 kB] 416s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpicard-java all 3.1.1+dfsg-1 [1731 kB] 416s Get:223 http://ftpmaster.internal/ubuntu plucky/universe arm64 libyaml-snake-java all 1.33-2 [320 kB] 416s Get:224 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 416s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 java-wrappers all 0.5 [9042 B] 416s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 picard-tools all 3.1.1+dfsg-1 [308 kB] 416s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 drop-seq-tools all 3.0.0+dfsg-1 [608 kB] 416s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtscodecs2 arm64 1.6.0-1build1 [78.0 kB] 416s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhts3t64 arm64 1.20+ds-1 [431 kB] 416s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 samtools arm64 1.20-3 [590 kB] 417s Fetched 301 MB in 15s (20.4 MB/s) 417s Selecting previously unselected package libgdk-pixbuf2.0-common. 417s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 417s Preparing to unpack .../000-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 417s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 417s Selecting previously unselected package libjpeg-turbo8:arm64. 417s Preparing to unpack .../001-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 417s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 417s Selecting previously unselected package libjpeg8:arm64. 417s Preparing to unpack .../002-libjpeg8_8c-2ubuntu11_arm64.deb ... 417s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 417s Selecting previously unselected package libdeflate0:arm64. 417s Preparing to unpack .../003-libdeflate0_1.21-1_arm64.deb ... 417s Unpacking libdeflate0:arm64 (1.21-1) ... 417s Selecting previously unselected package libjbig0:arm64. 417s Preparing to unpack .../004-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 417s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 417s Selecting previously unselected package liblerc4:arm64. 417s Preparing to unpack .../005-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 417s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 417s Selecting previously unselected package libsharpyuv0:arm64. 417s Preparing to unpack .../006-libsharpyuv0_1.4.0-0.1_arm64.deb ... 417s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 417s Selecting previously unselected package libwebp7:arm64. 417s Preparing to unpack .../007-libwebp7_1.4.0-0.1_arm64.deb ... 417s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 417s Selecting previously unselected package libtiff6:arm64. 417s Preparing to unpack .../008-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 417s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 417s Selecting previously unselected package libgdk-pixbuf-2.0-0:arm64. 417s Preparing to unpack .../009-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_arm64.deb ... 417s Unpacking libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 418s Selecting previously unselected package gtk-update-icon-cache. 418s Preparing to unpack .../010-gtk-update-icon-cache_4.16.2+ds-2_arm64.deb ... 418s No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. 418s No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. 418s Unpacking gtk-update-icon-cache (4.16.2+ds-2) ... 418s Selecting previously unselected package hicolor-icon-theme. 418s Preparing to unpack .../011-hicolor-icon-theme_0.18-1_all.deb ... 418s Unpacking hicolor-icon-theme (0.18-1) ... 418s Selecting previously unselected package humanity-icon-theme. 418s Preparing to unpack .../012-humanity-icon-theme_0.6.16_all.deb ... 418s Unpacking humanity-icon-theme (0.6.16) ... 418s Selecting previously unselected package ubuntu-mono. 418s Preparing to unpack .../013-ubuntu-mono_24.04-0ubuntu1_all.deb ... 418s Unpacking ubuntu-mono (24.04-0ubuntu1) ... 419s Selecting previously unselected package adwaita-icon-theme. 419s Preparing to unpack .../014-adwaita-icon-theme_47.0-1_all.deb ... 419s Unpacking adwaita-icon-theme (47.0-1) ... 419s Selecting previously unselected package ca-certificates-java. 419s Preparing to unpack .../015-ca-certificates-java_20240118_all.deb ... 419s Unpacking ca-certificates-java (20240118) ... 419s Selecting previously unselected package java-common. 419s Preparing to unpack .../016-java-common_0.76_all.deb ... 419s Unpacking java-common (0.76) ... 419s Selecting previously unselected package liblcms2-2:arm64. 419s Preparing to unpack .../017-liblcms2-2_2.14-2build1_arm64.deb ... 419s Unpacking liblcms2-2:arm64 (2.14-2build1) ... 419s Selecting previously unselected package libpcsclite1:arm64. 419s Preparing to unpack .../018-libpcsclite1_2.3.0-1_arm64.deb ... 419s Unpacking libpcsclite1:arm64 (2.3.0-1) ... 419s Selecting previously unselected package openjdk-21-jre-headless:arm64. 419s Preparing to unpack .../019-openjdk-21-jre-headless_21.0.5+11-1_arm64.deb ... 419s Unpacking openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 420s Selecting previously unselected package default-jre-headless. 420s Preparing to unpack .../020-default-jre-headless_2%3a1.21-76_arm64.deb ... 420s Unpacking default-jre-headless (2:1.21-76) ... 420s Selecting previously unselected package ant. 420s Preparing to unpack .../021-ant_1.10.14-1_all.deb ... 420s Unpacking ant (1.10.14-1) ... 420s Selecting previously unselected package ant-optional. 420s Preparing to unpack .../022-ant-optional_1.10.14-1_all.deb ... 420s Unpacking ant-optional (1.10.14-1) ... 420s Selecting previously unselected package at-spi2-common. 420s Preparing to unpack .../023-at-spi2-common_2.54.0-1_all.deb ... 420s Unpacking at-spi2-common (2.54.0-1) ... 420s Selecting previously unselected package libdconf1:arm64. 420s Preparing to unpack .../024-libdconf1_0.40.0-4build2_arm64.deb ... 420s Unpacking libdconf1:arm64 (0.40.0-4build2) ... 420s Selecting previously unselected package dconf-service. 420s Preparing to unpack .../025-dconf-service_0.40.0-4build2_arm64.deb ... 420s Unpacking dconf-service (0.40.0-4build2) ... 420s Selecting previously unselected package dconf-gsettings-backend:arm64. 420s Preparing to unpack .../026-dconf-gsettings-backend_0.40.0-4build2_arm64.deb ... 420s Unpacking dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 420s Selecting previously unselected package libatk1.0-0t64:arm64. 420s Preparing to unpack .../027-libatk1.0-0t64_2.54.0-1_arm64.deb ... 420s Unpacking libatk1.0-0t64:arm64 (2.54.0-1) ... 420s Selecting previously unselected package libxi6:arm64. 420s Preparing to unpack .../028-libxi6_2%3a1.8.2-1_arm64.deb ... 420s Unpacking libxi6:arm64 (2:1.8.2-1) ... 420s Selecting previously unselected package libatspi2.0-0t64:arm64. 420s Preparing to unpack .../029-libatspi2.0-0t64_2.54.0-1_arm64.deb ... 420s Unpacking libatspi2.0-0t64:arm64 (2.54.0-1) ... 420s Selecting previously unselected package libatk-bridge2.0-0t64:arm64. 421s Preparing to unpack .../030-libatk-bridge2.0-0t64_2.54.0-1_arm64.deb ... 421s Unpacking libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 421s Selecting previously unselected package fonts-dejavu-mono. 421s Preparing to unpack .../031-fonts-dejavu-mono_2.37-8_all.deb ... 421s Unpacking fonts-dejavu-mono (2.37-8) ... 421s Selecting previously unselected package fonts-dejavu-core. 421s Preparing to unpack .../032-fonts-dejavu-core_2.37-8_all.deb ... 421s Unpacking fonts-dejavu-core (2.37-8) ... 421s Selecting previously unselected package fontconfig-config. 421s Preparing to unpack .../033-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 421s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 421s Selecting previously unselected package libfontconfig1:arm64. 421s Preparing to unpack .../034-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 421s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 421s Selecting previously unselected package libpixman-1-0:arm64. 421s Preparing to unpack .../035-libpixman-1-0_0.42.2-1build1_arm64.deb ... 421s Unpacking libpixman-1-0:arm64 (0.42.2-1build1) ... 421s Selecting previously unselected package libxcb-render0:arm64. 421s Preparing to unpack .../036-libxcb-render0_1.17.0-2_arm64.deb ... 421s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 421s Selecting previously unselected package libxcb-shm0:arm64. 421s Preparing to unpack .../037-libxcb-shm0_1.17.0-2_arm64.deb ... 421s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 421s Selecting previously unselected package libxrender1:arm64. 421s Preparing to unpack .../038-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 421s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 421s Selecting previously unselected package libcairo2:arm64. 421s Preparing to unpack .../039-libcairo2_1.18.2-2_arm64.deb ... 421s Unpacking libcairo2:arm64 (1.18.2-2) ... 421s Selecting previously unselected package libcairo-gobject2:arm64. 421s Preparing to unpack .../040-libcairo-gobject2_1.18.2-2_arm64.deb ... 421s Unpacking libcairo-gobject2:arm64 (1.18.2-2) ... 421s Selecting previously unselected package libcolord2:arm64. 421s Preparing to unpack .../041-libcolord2_1.4.7-1build2_arm64.deb ... 421s Unpacking libcolord2:arm64 (1.4.7-1build2) ... 421s Selecting previously unselected package libavahi-common-data:arm64. 421s Preparing to unpack .../042-libavahi-common-data_0.8-13ubuntu6_arm64.deb ... 421s Unpacking libavahi-common-data:arm64 (0.8-13ubuntu6) ... 421s Selecting previously unselected package libavahi-common3:arm64. 421s Preparing to unpack .../043-libavahi-common3_0.8-13ubuntu6_arm64.deb ... 421s Unpacking libavahi-common3:arm64 (0.8-13ubuntu6) ... 421s Selecting previously unselected package libavahi-client3:arm64. 421s Preparing to unpack .../044-libavahi-client3_0.8-13ubuntu6_arm64.deb ... 421s Unpacking libavahi-client3:arm64 (0.8-13ubuntu6) ... 421s Selecting previously unselected package libcups2t64:arm64. 421s Preparing to unpack .../045-libcups2t64_2.4.10-1ubuntu2_arm64.deb ... 421s Unpacking libcups2t64:arm64 (2.4.10-1ubuntu2) ... 422s Selecting previously unselected package libepoxy0:arm64. 422s Preparing to unpack .../046-libepoxy0_1.5.10-1build1_arm64.deb ... 422s Unpacking libepoxy0:arm64 (1.5.10-1build1) ... 422s Selecting previously unselected package libgraphite2-3:arm64. 422s Preparing to unpack .../047-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 422s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 422s Selecting previously unselected package libharfbuzz0b:arm64. 422s Preparing to unpack .../048-libharfbuzz0b_9.0.0-1_arm64.deb ... 422s Unpacking libharfbuzz0b:arm64 (9.0.0-1) ... 422s Selecting previously unselected package fontconfig. 422s Preparing to unpack .../049-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 422s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 422s Selecting previously unselected package libthai-data. 422s Preparing to unpack .../050-libthai-data_0.1.29-2build1_all.deb ... 422s Unpacking libthai-data (0.1.29-2build1) ... 422s Selecting previously unselected package libdatrie1:arm64. 422s Preparing to unpack .../051-libdatrie1_0.2.13-3build1_arm64.deb ... 422s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 422s Selecting previously unselected package libthai0:arm64. 422s Preparing to unpack .../052-libthai0_0.1.29-2build1_arm64.deb ... 422s Unpacking libthai0:arm64 (0.1.29-2build1) ... 422s Selecting previously unselected package libpango-1.0-0:arm64. 422s Preparing to unpack .../053-libpango-1.0-0_1.54.0+ds-2_arm64.deb ... 422s Unpacking libpango-1.0-0:arm64 (1.54.0+ds-2) ... 422s Selecting previously unselected package libpangoft2-1.0-0:arm64. 422s Preparing to unpack .../054-libpangoft2-1.0-0_1.54.0+ds-2_arm64.deb ... 422s Unpacking libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 422s Selecting previously unselected package libpangocairo-1.0-0:arm64. 422s Preparing to unpack .../055-libpangocairo-1.0-0_1.54.0+ds-2_arm64.deb ... 422s Unpacking libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 422s Selecting previously unselected package libwayland-client0:arm64. 422s Preparing to unpack .../056-libwayland-client0_1.23.0-1_arm64.deb ... 422s Unpacking libwayland-client0:arm64 (1.23.0-1) ... 422s Selecting previously unselected package libwayland-cursor0:arm64. 422s Preparing to unpack .../057-libwayland-cursor0_1.23.0-1_arm64.deb ... 422s Unpacking libwayland-cursor0:arm64 (1.23.0-1) ... 422s Selecting previously unselected package libwayland-egl1:arm64. 422s Preparing to unpack .../058-libwayland-egl1_1.23.0-1_arm64.deb ... 422s Unpacking libwayland-egl1:arm64 (1.23.0-1) ... 422s Selecting previously unselected package libxcomposite1:arm64. 422s Preparing to unpack .../059-libxcomposite1_1%3a0.4.5-1build3_arm64.deb ... 422s Unpacking libxcomposite1:arm64 (1:0.4.5-1build3) ... 422s Selecting previously unselected package libxfixes3:arm64. 422s Preparing to unpack .../060-libxfixes3_1%3a6.0.0-2build1_arm64.deb ... 422s Unpacking libxfixes3:arm64 (1:6.0.0-2build1) ... 422s Selecting previously unselected package libxcursor1:arm64. 422s Preparing to unpack .../061-libxcursor1_1%3a1.2.2-1_arm64.deb ... 422s Unpacking libxcursor1:arm64 (1:1.2.2-1) ... 422s Selecting previously unselected package libxdamage1:arm64. 422s Preparing to unpack .../062-libxdamage1_1%3a1.1.6-1build1_arm64.deb ... 422s Unpacking libxdamage1:arm64 (1:1.1.6-1build1) ... 422s Selecting previously unselected package libxinerama1:arm64. 422s Preparing to unpack .../063-libxinerama1_2%3a1.1.4-3build1_arm64.deb ... 422s Unpacking libxinerama1:arm64 (2:1.1.4-3build1) ... 423s Selecting previously unselected package libxrandr2:arm64. 423s Preparing to unpack .../064-libxrandr2_2%3a1.5.4-1_arm64.deb ... 423s Unpacking libxrandr2:arm64 (2:1.5.4-1) ... 423s Selecting previously unselected package libgtk-3-common. 423s Preparing to unpack .../065-libgtk-3-common_3.24.43-3ubuntu2_all.deb ... 423s Unpacking libgtk-3-common (3.24.43-3ubuntu2) ... 423s Selecting previously unselected package libgtk-3-0t64:arm64. 423s Preparing to unpack .../066-libgtk-3-0t64_3.24.43-3ubuntu2_arm64.deb ... 423s Unpacking libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 423s Selecting previously unselected package libglvnd0:arm64. 423s Preparing to unpack .../067-libglvnd0_1.7.0-1build1_arm64.deb ... 423s Unpacking libglvnd0:arm64 (1.7.0-1build1) ... 423s Selecting previously unselected package libglapi-mesa:arm64. 423s Preparing to unpack .../068-libglapi-mesa_24.2.3-1ubuntu1_arm64.deb ... 423s Unpacking libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 423s Selecting previously unselected package libx11-xcb1:arm64. 423s Preparing to unpack .../069-libx11-xcb1_2%3a1.8.7-1build1_arm64.deb ... 423s Unpacking libx11-xcb1:arm64 (2:1.8.7-1build1) ... 423s Selecting previously unselected package libxcb-dri2-0:arm64. 423s Preparing to unpack .../070-libxcb-dri2-0_1.17.0-2_arm64.deb ... 423s Unpacking libxcb-dri2-0:arm64 (1.17.0-2) ... 423s Selecting previously unselected package libxcb-dri3-0:arm64. 423s Preparing to unpack .../071-libxcb-dri3-0_1.17.0-2_arm64.deb ... 423s Unpacking libxcb-dri3-0:arm64 (1.17.0-2) ... 423s Selecting previously unselected package libxcb-glx0:arm64. 423s Preparing to unpack .../072-libxcb-glx0_1.17.0-2_arm64.deb ... 423s Unpacking libxcb-glx0:arm64 (1.17.0-2) ... 423s Selecting previously unselected package libxcb-present0:arm64. 423s Preparing to unpack .../073-libxcb-present0_1.17.0-2_arm64.deb ... 423s Unpacking libxcb-present0:arm64 (1.17.0-2) ... 423s Selecting previously unselected package libxcb-randr0:arm64. 423s Preparing to unpack .../074-libxcb-randr0_1.17.0-2_arm64.deb ... 423s Unpacking libxcb-randr0:arm64 (1.17.0-2) ... 423s Selecting previously unselected package libxcb-sync1:arm64. 423s Preparing to unpack .../075-libxcb-sync1_1.17.0-2_arm64.deb ... 423s Unpacking libxcb-sync1:arm64 (1.17.0-2) ... 423s Selecting previously unselected package libxcb-xfixes0:arm64. 423s Preparing to unpack .../076-libxcb-xfixes0_1.17.0-2_arm64.deb ... 423s Unpacking libxcb-xfixes0:arm64 (1.17.0-2) ... 423s Selecting previously unselected package libxshmfence1:arm64. 423s Preparing to unpack .../077-libxshmfence1_1.3-1build5_arm64.deb ... 423s Unpacking libxshmfence1:arm64 (1.3-1build5) ... 423s Selecting previously unselected package libxxf86vm1:arm64. 423s Preparing to unpack .../078-libxxf86vm1_1%3a1.1.4-1build4_arm64.deb ... 423s Unpacking libxxf86vm1:arm64 (1:1.1.4-1build4) ... 423s Selecting previously unselected package libdrm-amdgpu1:arm64. 423s Preparing to unpack .../079-libdrm-amdgpu1_2.4.122-1_arm64.deb ... 423s Unpacking libdrm-amdgpu1:arm64 (2.4.122-1) ... 423s Selecting previously unselected package libdrm-radeon1:arm64. 423s Preparing to unpack .../080-libdrm-radeon1_2.4.122-1_arm64.deb ... 424s Unpacking libdrm-radeon1:arm64 (2.4.122-1) ... 424s Selecting previously unselected package mesa-libgallium:arm64. 424s Preparing to unpack .../081-mesa-libgallium_24.2.3-1ubuntu1_arm64.deb ... 424s Unpacking mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 424s Selecting previously unselected package libvulkan1:arm64. 424s Preparing to unpack .../082-libvulkan1_1.3.290.0-1_arm64.deb ... 424s Unpacking libvulkan1:arm64 (1.3.290.0-1) ... 424s Selecting previously unselected package libwayland-server0:arm64. 424s Preparing to unpack .../083-libwayland-server0_1.23.0-1_arm64.deb ... 424s Unpacking libwayland-server0:arm64 (1.23.0-1) ... 424s Selecting previously unselected package libgbm1:arm64. 424s Preparing to unpack .../084-libgbm1_24.2.3-1ubuntu1_arm64.deb ... 424s Unpacking libgbm1:arm64 (24.2.3-1ubuntu1) ... 424s Selecting previously unselected package libgl1-mesa-dri:arm64. 424s Preparing to unpack .../085-libgl1-mesa-dri_24.2.3-1ubuntu1_arm64.deb ... 424s Unpacking libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 424s Selecting previously unselected package libglx-mesa0:arm64. 424s Preparing to unpack .../086-libglx-mesa0_24.2.3-1ubuntu1_arm64.deb ... 424s Unpacking libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 424s Selecting previously unselected package libglx0:arm64. 424s Preparing to unpack .../087-libglx0_1.7.0-1build1_arm64.deb ... 424s Unpacking libglx0:arm64 (1.7.0-1build1) ... 424s Selecting previously unselected package libgl1:arm64. 424s Preparing to unpack .../088-libgl1_1.7.0-1build1_arm64.deb ... 424s Unpacking libgl1:arm64 (1.7.0-1build1) ... 424s Selecting previously unselected package libasound2-data. 424s Preparing to unpack .../089-libasound2-data_1.2.12-1_all.deb ... 424s Unpacking libasound2-data (1.2.12-1) ... 424s Selecting previously unselected package libasound2t64:arm64. 424s Preparing to unpack .../090-libasound2t64_1.2.12-1_arm64.deb ... 424s Unpacking libasound2t64:arm64 (1.2.12-1) ... 424s Selecting previously unselected package libgif7:arm64. 424s Preparing to unpack .../091-libgif7_5.2.2-1ubuntu1_arm64.deb ... 424s Unpacking libgif7:arm64 (5.2.2-1ubuntu1) ... 424s Selecting previously unselected package x11-common. 424s Preparing to unpack .../092-x11-common_1%3a7.7+23ubuntu3_all.deb ... 424s Unpacking x11-common (1:7.7+23ubuntu3) ... 424s Selecting previously unselected package libxtst6:arm64. 424s Preparing to unpack .../093-libxtst6_2%3a1.2.3-1.1build1_arm64.deb ... 424s Unpacking libxtst6:arm64 (2:1.2.3-1.1build1) ... 424s Selecting previously unselected package openjdk-21-jre:arm64. 424s Preparing to unpack .../094-openjdk-21-jre_21.0.5+11-1_arm64.deb ... 424s Unpacking openjdk-21-jre:arm64 (21.0.5+11-1) ... 424s Selecting previously unselected package default-jre. 424s Preparing to unpack .../095-default-jre_2%3a1.21-76_arm64.deb ... 424s Unpacking default-jre (2:1.21-76) ... 424s Selecting previously unselected package drop-seq-testdata. 425s Preparing to unpack .../096-drop-seq-testdata_3.0.0+dfsg-1_all.deb ... 425s Unpacking drop-seq-testdata (3.0.0+dfsg-1) ... 425s Selecting previously unselected package libapache-pom-java. 425s Preparing to unpack .../097-libapache-pom-java_33-2_all.deb ... 425s Unpacking libapache-pom-java (33-2) ... 425s Selecting previously unselected package libcommons-parent-java. 425s Preparing to unpack .../098-libcommons-parent-java_56-1_all.deb ... 425s Unpacking libcommons-parent-java (56-1) ... 425s Selecting previously unselected package libcommons-lang3-java. 425s Preparing to unpack .../099-libcommons-lang3-java_3.14.0-1_all.deb ... 425s Unpacking libcommons-lang3-java (3.14.0-1) ... 425s Selecting previously unselected package libfreemarker-java. 425s Preparing to unpack .../100-libfreemarker-java_2.3.32-2_all.deb ... 425s Unpacking libfreemarker-java (2.3.32-2) ... 425s Selecting previously unselected package libgoogle-gson-java. 425s Preparing to unpack .../101-libgoogle-gson-java_2.10.1-1_all.deb ... 425s Unpacking libgoogle-gson-java (2.10.1-1) ... 425s Selecting previously unselected package libjoptsimple-java. 425s Preparing to unpack .../102-libjoptsimple-java_5.0.4-4_all.deb ... 425s Unpacking libjoptsimple-java (5.0.4-4) ... 425s Selecting previously unselected package libcommons-codec-java. 425s Preparing to unpack .../103-libcommons-codec-java_1.16.0-1_all.deb ... 425s Unpacking libcommons-codec-java (1.16.0-1) ... 426s Selecting previously unselected package libcommons-logging-java. 426s Preparing to unpack .../104-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ... 426s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ... 426s Selecting previously unselected package libhttpcore-java. 426s Preparing to unpack .../105-libhttpcore-java_4.4.16-1_all.deb ... 426s Unpacking libhttpcore-java (4.4.16-1) ... 426s Selecting previously unselected package libhttpclient-java. 426s Preparing to unpack .../106-libhttpclient-java_4.5.14-1_all.deb ... 426s Unpacking libhttpclient-java (4.5.14-1) ... 426s Selecting previously unselected package liblightcouch-java. 426s Preparing to unpack .../107-liblightcouch-java_0.2.0-1_all.deb ... 426s Unpacking liblightcouch-java (0.2.0-1) ... 426s Selecting previously unselected package libmongodb-java. 426s Preparing to unpack .../108-libmongodb-java_3.6.3-2_all.deb ... 426s Unpacking libmongodb-java (3.6.3-2) ... 426s Selecting previously unselected package libslf4j-java. 426s Preparing to unpack .../109-libslf4j-java_1.7.32-1_all.deb ... 426s Unpacking libslf4j-java (1.7.32-1) ... 426s Selecting previously unselected package liblog4j2-java. 426s Preparing to unpack .../110-liblog4j2-java_2.19.0-2_all.deb ... 426s Unpacking liblog4j2-java (2.19.0-2) ... 426s Selecting previously unselected package libbarclay-java. 426s Preparing to unpack .../111-libbarclay-java_5.0.0+dfsg-1_all.deb ... 426s Unpacking libbarclay-java (5.0.0+dfsg-1) ... 426s Selecting previously unselected package libgeronimo-annotation-1.3-spec-java. 426s Preparing to unpack .../112-libgeronimo-annotation-1.3-spec-java_1.3-1_all.deb ... 426s Unpacking libgeronimo-annotation-1.3-spec-java (1.3-1) ... 426s Selecting previously unselected package libciftools-java. 426s Preparing to unpack .../113-libciftools-java_6.0.0-1_all.deb ... 426s Unpacking libciftools-java (6.0.0-1) ... 426s Selecting previously unselected package libcommons-math-java. 426s Preparing to unpack .../114-libcommons-math-java_2.2-8_all.deb ... 426s Unpacking libcommons-math-java (2.2-8) ... 426s Selecting previously unselected package libatinject-jsr330-api-java. 426s Preparing to unpack .../115-libatinject-jsr330-api-java_1.0+ds1-5_all.deb ... 426s Unpacking libatinject-jsr330-api-java (1.0+ds1-5) ... 426s Selecting previously unselected package liberror-prone-java. 426s Preparing to unpack .../116-liberror-prone-java_2.18.0-1_all.deb ... 426s Unpacking liberror-prone-java (2.18.0-1) ... 426s Selecting previously unselected package libjsr305-java. 426s Preparing to unpack .../117-libjsr305-java_0.1~+svn49-11_all.deb ... 426s Unpacking libjsr305-java (0.1~+svn49-11) ... 426s Selecting previously unselected package libguava-java. 426s Preparing to unpack .../118-libguava-java_32.0.1-1_all.deb ... 426s Unpacking libguava-java (32.0.1-1) ... 426s Selecting previously unselected package libitext5-java. 426s Preparing to unpack .../119-libitext5-java_5.5.13.3-4_all.deb ... 426s Unpacking libitext5-java (5.5.13.3-4) ... 426s Selecting previously unselected package libjackson2-annotations-java. 426s Preparing to unpack .../120-libjackson2-annotations-java_2.14.0-1_all.deb ... 426s Unpacking libjackson2-annotations-java (2.14.0-1) ... 427s Selecting previously unselected package libjackson2-core-java. 427s Preparing to unpack .../121-libjackson2-core-java_2.14.1-1_all.deb ... 427s Unpacking libjackson2-core-java (2.14.1-1) ... 427s Selecting previously unselected package libjackson2-databind-java. 427s Preparing to unpack .../122-libjackson2-databind-java_2.14.0-1_all.deb ... 427s Unpacking libjackson2-databind-java (2.14.0-1) ... 427s Selecting previously unselected package libactivation-java. 427s Preparing to unpack .../123-libactivation-java_1.2.0-2_all.deb ... 427s Unpacking libactivation-java (1.2.0-2) ... 427s Selecting previously unselected package libjaxb-api-java. 427s Preparing to unpack .../124-libjaxb-api-java_2.3.1-1_all.deb ... 427s Unpacking libjaxb-api-java (2.3.1-1) ... 427s Selecting previously unselected package libargs4j-java. 427s Preparing to unpack .../125-libargs4j-java_2.33-2_all.deb ... 427s Unpacking libargs4j-java (2.33-2) ... 427s Selecting previously unselected package libjaxen-java. 427s Preparing to unpack .../126-libjaxen-java_1.1.6-5_all.deb ... 427s Unpacking libjaxen-java (1.1.6-5) ... 427s Selecting previously unselected package libdom4j-java. 427s Preparing to unpack .../127-libdom4j-java_2.1.4-1_all.deb ... 427s Unpacking libdom4j-java (2.1.4-1) ... 427s Selecting previously unselected package libcommons-io-java. 427s Preparing to unpack .../128-libcommons-io-java_2.16.1-1_all.deb ... 427s Unpacking libcommons-io-java (2.16.1-1) ... 427s Selecting previously unselected package libmaven-shared-utils-java. 427s Preparing to unpack .../129-libmaven-shared-utils-java_3.3.4-1_all.deb ... 427s Unpacking libmaven-shared-utils-java (3.3.4-1) ... 427s Selecting previously unselected package libcommons-cli-java. 427s Preparing to unpack .../130-libcommons-cli-java_1.6.0-1_all.deb ... 427s Unpacking libcommons-cli-java (1.6.0-1) ... 427s Selecting previously unselected package libaopalliance-java. 427s Preparing to unpack .../131-libaopalliance-java_20070526-7_all.deb ... 427s Unpacking libaopalliance-java (20070526-7) ... 427s Selecting previously unselected package libguice-java. 427s Preparing to unpack .../132-libguice-java_4.2.3-2_all.deb ... 427s Unpacking libguice-java (4.2.3-2) ... 427s Selecting previously unselected package libmaven-parent-java. 427s Preparing to unpack .../133-libmaven-parent-java_43-2_all.deb ... 427s Unpacking libmaven-parent-java (43-2) ... 427s Selecting previously unselected package libplexus-utils2-java. 427s Preparing to unpack .../134-libplexus-utils2-java_3.4.2-1_all.deb ... 427s Unpacking libplexus-utils2-java (3.4.2-1) ... 427s Selecting previously unselected package libwagon-provider-api-java. 427s Preparing to unpack .../135-libwagon-provider-api-java_3.5.3-1_all.deb ... 427s Unpacking libwagon-provider-api-java (3.5.3-1) ... 427s Selecting previously unselected package libmaven-resolver-java. 427s Preparing to unpack .../136-libmaven-resolver-java_1.6.3-1_all.deb ... 427s Unpacking libmaven-resolver-java (1.6.3-1) ... 427s Selecting previously unselected package libplexus-cipher-java. 427s Preparing to unpack .../137-libplexus-cipher-java_2.0-1_all.deb ... 427s Unpacking libplexus-cipher-java (2.0-1) ... 427s Selecting previously unselected package libplexus-classworlds-java. 427s Preparing to unpack .../138-libplexus-classworlds-java_2.7.0-1_all.deb ... 427s Unpacking libplexus-classworlds-java (2.7.0-1) ... 428s Selecting previously unselected package libplexus-component-annotations-java. 428s Preparing to unpack .../139-libplexus-component-annotations-java_2.1.1-1_all.deb ... 428s Unpacking libplexus-component-annotations-java (2.1.1-1) ... 428s Selecting previously unselected package libplexus-interpolation-java. 428s Preparing to unpack .../140-libplexus-interpolation-java_1.26-1_all.deb ... 428s Unpacking libplexus-interpolation-java (1.26-1) ... 428s Selecting previously unselected package libplexus-sec-dispatcher-java. 428s Preparing to unpack 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to unpack .../146-libmaven3-core-java_3.8.8-1_all.deb ... 428s Unpacking libmaven3-core-java (3.8.8-1) ... 428s Selecting previously unselected package libmaven-shared-io-java. 428s Preparing to unpack .../147-libmaven-shared-io-java_3.0.0-4_all.deb ... 428s Unpacking libmaven-shared-io-java (3.0.0-4) ... 428s Selecting previously unselected package libmaven-file-management-java. 428s Preparing to unpack .../148-libmaven-file-management-java_3.0.0-1_all.deb ... 428s Unpacking libmaven-file-management-java (3.0.0-1) ... 428s Selecting previously unselected package libcommons-compress-java. 428s Preparing to unpack .../149-libcommons-compress-java_1.25.0-1_all.deb ... 428s Unpacking libcommons-compress-java (1.25.0-1) ... 428s Selecting previously unselected package libplexus-io-java. 428s Preparing to unpack .../150-libplexus-io-java_3.3.1-2_all.deb ... 428s Unpacking libplexus-io-java (3.3.1-2) ... 428s Selecting previously unselected package libsnappy1v5:arm64. 428s Preparing to unpack .../151-libsnappy1v5_1.2.1-1_arm64.deb ... 428s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 428s Selecting previously unselected package libsnappy-jni. 428s Preparing to unpack .../152-libsnappy-jni_1.1.10.5-2_arm64.deb ... 428s Unpacking libsnappy-jni (1.1.10.5-2) ... 428s Selecting previously unselected package libsnappy-java. 428s Preparing to unpack .../153-libsnappy-java_1.1.10.5-2_all.deb ... 428s Unpacking libsnappy-java (1.1.10.5-2) ... 428s Selecting previously unselected package libxz-java. 428s Preparing to unpack .../154-libxz-java_1.9-1_all.deb ... 428s Unpacking libxz-java (1.9-1) ... 428s Selecting previously unselected package libplexus-archiver-java. 428s Preparing to unpack .../155-libplexus-archiver-java_4.6.1-1_all.deb ... 428s Unpacking libplexus-archiver-java (4.6.1-1) ... 428s Selecting previously unselected package libjsoup-java. 428s Preparing to unpack .../156-libjsoup-java_1.15.3-1_all.deb ... 428s Unpacking libjsoup-java (1.15.3-1) ... 429s Selecting previously unselected package libwagon-http-java. 429s Preparing to unpack .../157-libwagon-http-java_3.5.3-1_all.deb ... 429s Unpacking libwagon-http-java (3.5.3-1) ... 429s Selecting previously unselected package libistack-commons-java. 429s Preparing to unpack .../158-libistack-commons-java_3.0.6-5_all.deb ... 429s Unpacking libistack-commons-java (3.0.6-5) ... 429s Selecting previously unselected package libcodemodel-java. 429s Preparing to unpack .../159-libcodemodel-java_2.6+jaxb2.3.0.1-10.1_all.deb ... 429s Unpacking libcodemodel-java (2.6+jaxb2.3.0.1-10.1) ... 429s Selecting previously unselected package librelaxng-datatype-java. 429s Preparing to unpack .../160-librelaxng-datatype-java_1.0+ds1-3.1_all.deb ... 429s Unpacking librelaxng-datatype-java (1.0+ds1-3.1) ... 429s Selecting previously unselected package librngom-java. 429s Preparing to unpack .../161-librngom-java_2.3.0.1-10.1_all.deb ... 429s Unpacking librngom-java (2.3.0.1-10.1) ... 429s Selecting previously unselected package libxsom-java. 429s Preparing to unpack .../162-libxsom-java_2.3.0.1-10.1_all.deb ... 429s Unpacking libxsom-java (2.3.0.1-10.1) ... 429s Selecting previously unselected package libtxw2-java. 429s Preparing to unpack .../163-libtxw2-java_2.3.0.1-10.1_all.deb ... 429s Unpacking libtxw2-java (2.3.0.1-10.1) ... 429s Selecting previously unselected package libxml-commons-resolver1.1-java. 429s Preparing to unpack .../164-libxml-commons-resolver1.1-java_1.2-11_all.deb ... 429s Unpacking libxml-commons-resolver1.1-java (1.2-11) ... 429s Selecting previously unselected package libdtd-parser-java. 429s Preparing to unpack .../165-libdtd-parser-java_1.2-1_all.deb ... 429s Unpacking libdtd-parser-java (1.2-1) ... 429s Selecting previously unselected package libstax-ex-java. 429s Preparing to unpack .../166-libstax-ex-java_1.7.8-3_all.deb ... 429s Unpacking libstax-ex-java (1.7.8-3) ... 429s Selecting previously unselected package libstreambuffer-java. 429s Preparing to unpack .../167-libstreambuffer-java_1.5.4-1.1_all.deb ... 429s Unpacking libstreambuffer-java (1.5.4-1.1) ... 429s Selecting previously unselected package libfastinfoset-java. 429s Preparing to unpack .../168-libfastinfoset-java_1.2.12-3_all.deb ... 429s Unpacking libfastinfoset-java (1.2.12-3) ... 429s Selecting previously unselected package libjaxb-java. 429s Preparing to unpack .../169-libjaxb-java_2.3.0.1-10.1_all.deb ... 429s Unpacking libjaxb-java (2.3.0.1-10.1) ... 429s Selecting previously unselected package libantlr4-runtime-java. 429s Preparing to unpack .../170-libantlr4-runtime-java_4.9.2-2_all.deb ... 429s Unpacking libantlr4-runtime-java (4.9.2-2) ... 429s Selecting previously unselected package libapfloat-java. 429s Preparing to unpack .../171-libapfloat-java_1.13.0-1_all.deb ... 429s Unpacking libapfloat-java (1.13.0-1) ... 429s Selecting previously unselected package libmaven-archiver-java. 429s Preparing to unpack .../172-libmaven-archiver-java_3.6.2-1_all.deb ... 429s Unpacking libmaven-archiver-java (3.6.2-1) ... 429s Selecting previously unselected package libmaven-jar-plugin-java. 429s Preparing to unpack .../173-libmaven-jar-plugin-java_3.3.0-2_all.deb ... 429s Unpacking libmaven-jar-plugin-java (3.3.0-2) ... 429s Selecting previously unselected package libcommons-text-java. 429s Preparing to unpack .../174-libcommons-text-java_1.11.0-1_all.deb ... 429s Unpacking libcommons-text-java (1.11.0-1) ... 430s Selecting previously unselected package libfastutil-java. 430s Preparing to unpack .../175-libfastutil-java_8.5.14+dfsg-1_all.deb ... 430s Unpacking libfastutil-java (8.5.14+dfsg-1) ... 430s Selecting previously unselected package libjheaps-java. 430s Preparing to unpack .../176-libjheaps-java_0.14-2_all.deb ... 430s Unpacking libjheaps-java (0.14-2) ... 430s Selecting previously unselected package libxml-commons-external-java. 430s Preparing to unpack .../177-libxml-commons-external-java_1.4.01-6_all.deb ... 430s Unpacking libxml-commons-external-java (1.4.01-6) ... 430s Selecting previously unselected package libxerces2-java. 430s Preparing to unpack .../178-libxerces2-java_2.12.2-1_all.deb ... 430s Unpacking libxerces2-java (2.12.2-1) ... 430s Selecting previously unselected package libjgraphx-java. 430s Preparing to unpack .../179-libjgraphx-java_2.1.0.7-4_all.deb ... 430s Unpacking libjgraphx-java (2.1.0.7-4) ... 430s Selecting previously unselected package libjgrapht-java. 430s Preparing to unpack .../180-libjgrapht-java_1.5.2-1_all.deb ... 430s Unpacking libjgrapht-java (1.5.2-1) ... 430s Selecting previously unselected package libinchi1. 430s Preparing to unpack .../181-libinchi1_1.03+dfsg-4build1_arm64.deb ... 430s Unpacking libinchi1 (1.03+dfsg-4build1) ... 430s Selecting previously unselected package libjni-inchi-jni. 430s Preparing to unpack .../182-libjni-inchi-jni_0.8+dfsg-7build1_arm64.deb ... 430s Unpacking libjni-inchi-jni (0.8+dfsg-7build1) ... 430s Selecting previously unselected package libcommons-exec-java. 430s Preparing to unpack .../183-libcommons-exec-java_1.3-2_all.deb ... 430s Unpacking libcommons-exec-java (1.3-2) ... 430s Selecting previously unselected package libexec-maven-plugin-java. 430s Preparing to unpack .../184-libexec-maven-plugin-java_3.1.0-2_all.deb ... 430s Unpacking libexec-maven-plugin-java (3.1.0-2) ... 430s Selecting previously unselected package libmaven-shared-incremental-java. 430s Preparing to unpack .../185-libmaven-shared-incremental-java_1.1-6_all.deb ... 430s Unpacking libmaven-shared-incremental-java (1.1-6) ... 430s Selecting previously unselected package libcommons-lang-java. 430s Preparing to unpack .../186-libcommons-lang-java_2.6-10_all.deb ... 430s Unpacking libcommons-lang-java (2.6-10) ... 430s Selecting previously unselected package libxbean-reflect-java. 430s Preparing to unpack .../187-libxbean-reflect-java_4.5-8_all.deb ... 430s Unpacking libxbean-reflect-java (4.5-8) ... 430s Selecting previously unselected package libplexus-container-default-java. 430s Preparing to unpack .../188-libplexus-container-default-java_2.1.1-1_all.deb ... 430s Unpacking libplexus-container-default-java (2.1.1-1) ... 430s Selecting previously unselected package libplexus-compiler-java. 430s Preparing to unpack .../189-libplexus-compiler-java_2.13.0-1_all.deb ... 430s Unpacking libplexus-compiler-java (2.13.0-1) ... 430s Selecting previously unselected package libasm-java. 430s Preparing to unpack .../190-libasm-java_9.7-2_all.deb ... 430s Unpacking libasm-java (9.7-2) ... 431s Selecting previously unselected package libqdox2-java. 431s Preparing to unpack .../191-libqdox2-java_2.0.3-1_all.deb ... 431s Unpacking libqdox2-java (2.0.3-1) ... 431s Selecting previously unselected package libplexus-languages-java. 431s Preparing to unpack .../192-libplexus-languages-java_1.1.1-2_all.deb ... 431s Unpacking libplexus-languages-java (1.1.1-2) ... 431s Selecting previously unselected package libmaven-compiler-plugin-java. 431s Preparing to unpack .../193-libmaven-compiler-plugin-java_3.10.1-2_all.deb ... 431s Unpacking libmaven-compiler-plugin-java (3.10.1-2) ... 431s Selecting previously unselected package liblog4j1.2-java. 431s Preparing to unpack .../194-liblog4j1.2-java_1.2.17-11_all.deb ... 431s Unpacking liblog4j1.2-java (1.2.17-11) ... 431s Selecting previously unselected package libjni-inchi-java. 431s Preparing to unpack .../195-libjni-inchi-java_0.8+dfsg-7build1_all.deb ... 431s Unpacking libjni-inchi-java (0.8+dfsg-7build1) ... 431s Selecting previously unselected package libnaga-java. 431s Preparing to unpack .../196-libnaga-java_3.0+svn80-5_all.deb ... 431s Unpacking libnaga-java (3.0+svn80-5) ... 431s Selecting previously unselected package libjmol-java. 431s Preparing to unpack .../197-libjmol-java_16.2.15+dfsg-1_all.deb ... 431s Unpacking libjmol-java (16.2.15+dfsg-1) ... 431s Selecting previously unselected package libjson-simple-java. 431s Preparing to unpack .../198-libjson-simple-java_2.3.0-1_all.deb ... 431s Unpacking libjson-simple-java (2.3.0-1) ... 431s Selecting previously unselected package libmsgpack-java. 431s Preparing to unpack .../199-libmsgpack-java_0.9.6-1_all.deb ... 431s Unpacking libmsgpack-java (0.9.6-1) ... 431s Selecting previously unselected package libmmtf-java. 431s Preparing to unpack .../200-libmmtf-java_1.0.11-1_all.deb ... 431s Unpacking libmmtf-java (1.0.11-1) ... 431s Selecting previously unselected package libvecmath-java. 431s Preparing to unpack .../201-libvecmath-java_1.5.2-7_all.deb ... 431s Unpacking libvecmath-java (1.5.2-7) ... 431s Selecting previously unselected package libbiojava6-java. 431s Preparing to unpack .../202-libbiojava6-java_6.1.0+dfsg-4_all.deb ... 431s Unpacking libbiojava6-java (6.1.0+dfsg-4) ... 431s Selecting previously unselected package libcommons-collections4-java. 431s Preparing to unpack .../203-libcommons-collections4-java_4.4-2_all.deb ... 431s Unpacking libcommons-collections4-java (4.4-2) ... 431s Selecting previously unselected package libcommons-math3-java. 431s Preparing to unpack .../204-libcommons-math3-java_3.6.1-3_all.deb ... 431s Unpacking libcommons-math3-java (3.6.1-3) ... 431s Selecting previously unselected package libcommons-jexl2-java. 431s Preparing to unpack .../205-libcommons-jexl2-java_2.1.1-6_all.deb ... 431s Unpacking libcommons-jexl2-java (2.1.1-6) ... 431s Selecting previously unselected package libmjson-java. 431s Preparing to unpack .../206-libmjson-java_1.4.0-3_all.deb ... 431s Unpacking libmjson-java (1.4.0-3) ... 432s Selecting previously unselected package libmbedcrypto7t64:arm64. 432s Preparing to unpack .../207-libmbedcrypto7t64_2.28.8-1_arm64.deb ... 432s Unpacking libmbedcrypto7t64:arm64 (2.28.8-1) ... 432s Selecting previously unselected package libmbedx509-1t64:arm64. 432s Preparing to unpack .../208-libmbedx509-1t64_2.28.8-1_arm64.deb ... 432s Unpacking libmbedx509-1t64:arm64 (2.28.8-1) ... 432s Selecting previously unselected package libmbedtls14t64:arm64. 432s Preparing to unpack .../209-libmbedtls14t64_2.28.8-1_arm64.deb ... 432s Unpacking libmbedtls14t64:arm64 (2.28.8-1) ... 432s Selecting previously unselected package ncbi-vdb-data. 432s Preparing to unpack .../210-ncbi-vdb-data_3.0.2+dfsg-2build2_all.deb ... 432s Unpacking ncbi-vdb-data (3.0.2+dfsg-2build2) ... 432s Selecting previously unselected package libncbi-vdb3:arm64. 432s Preparing to unpack .../211-libncbi-vdb3_3.0.2+dfsg-2build2_arm64.deb ... 432s Unpacking libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 432s Selecting previously unselected package libncbi-ngs3:arm64. 432s Preparing to unpack .../212-libncbi-ngs3_3.0.3+dfsg-9ubuntu1_arm64.deb ... 432s Unpacking libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 432s Selecting previously unselected package libngs-jni:arm64. 432s Preparing to unpack .../213-libngs-jni_3.0.3+dfsg-9ubuntu1_arm64.deb ... 432s Unpacking libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 432s Selecting previously unselected package libngs-java:arm64. 432s Preparing to unpack .../214-libngs-java_3.0.3+dfsg-9ubuntu1_arm64.deb ... 432s Unpacking libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 432s Selecting previously unselected package librhino-java. 432s Preparing to unpack .../215-librhino-java_1.7.15-1_all.deb ... 432s Unpacking librhino-java (1.7.15-1) ... 432s Selecting previously unselected package libhtsjdk-java. 432s Preparing to unpack .../216-libhtsjdk-java_4.1.0+dfsg-2_all.deb ... 432s Unpacking libhtsjdk-java (4.1.0+dfsg-2) ... 432s Selecting previously unselected package libla4j-java. 432s Preparing to unpack .../217-libla4j-java_0.6.0-4_all.deb ... 432s Unpacking libla4j-java (0.6.0-4) ... 432s Selecting previously unselected package libgatk-native-bindings-java. 432s Preparing to unpack .../218-libgatk-native-bindings-java_1.0.0+dfsg-2_all.deb ... 432s Unpacking libgatk-native-bindings-java (1.0.0+dfsg-2) ... 432s Selecting previously unselected package libgkl-java. 432s 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Selecting previously unselected package drop-seq-tools. 433s Preparing to unpack .../225-drop-seq-tools_3.0.0+dfsg-1_all.deb ... 433s Unpacking drop-seq-tools (3.0.0+dfsg-1) ... 433s Selecting previously unselected package libhtscodecs2:arm64. 433s Preparing to unpack .../226-libhtscodecs2_1.6.0-1build1_arm64.deb ... 433s Unpacking libhtscodecs2:arm64 (1.6.0-1build1) ... 433s Selecting previously unselected package libhts3t64:arm64. 433s Preparing to unpack .../227-libhts3t64_1.20+ds-1_arm64.deb ... 433s Unpacking libhts3t64:arm64 (1.20+ds-1) ... 433s Selecting previously unselected package samtools. 433s Preparing to unpack .../228-samtools_1.20-3_arm64.deb ... 433s Unpacking samtools (1.20-3) ... 433s Selecting previously unselected package autopkgtest-satdep. 433s Preparing to unpack .../229-3-autopkgtest-satdep.deb ... 433s Unpacking autopkgtest-satdep (0) ... 433s Setting up libhtscodecs2:arm64 (1.6.0-1build1) ... 433s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 433s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ... 433s Setting up liblcms2-2:arm64 (2.14-2build1) ... 433s Setting up libpixman-1-0:arm64 (0.42.2-1build1) ... 433s Setting up libfastutil-java (8.5.14+dfsg-1) ... 433s Setting up libjackson2-annotations-java (2.14.0-1) ... 433s Setting up libdtd-parser-java (1.2-1) ... 433s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 433s Setting up libwayland-server0:arm64 (1.23.0-1) ... 433s Setting up libx11-xcb1:arm64 (2:1.8.7-1build1) ... 433s Setting up libslf4j-java (1.7.32-1) ... 433s Setting up libplexus-utils2-java (3.4.2-1) ... 433s Setting up libplexus-classworlds-java (2.7.0-1) ... 433s Setting up libxdamage1:arm64 (1:1.1.6-1build1) ... 433s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ... 433s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 433s Setting up libjsr305-java (0.1~+svn49-11) ... 433s Setting up hicolor-icon-theme (0.18-1) ... 433s Setting up libxi6:arm64 (2:1.8.2-1) ... 433s Setting up libgatk-native-bindings-java (1.0.0+dfsg-2) 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Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 433s Setting up libactivation-java (1.2.0-2) ... 433s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 433s Setting up libvulkan1:arm64 (1.3.290.0-1) ... 433s Setting up libapfloat-java (1.13.0-1) ... 433s Setting up libwebp7:arm64 (1.4.0-0.1) ... 433s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ... 433s Setting up libgif7:arm64 (5.2.2-1ubuntu1) ... 433s Setting up libfreemarker-java (2.3.32-2) ... 433s Setting up libxshmfence1:arm64 (1.3-1build5) ... 433s Setting up libjsoup-java (1.15.3-1) ... 433s Setting up at-spi2-common (2.54.0-1) ... 433s Setting up libcommons-math-java (2.2-8) ... 433s Setting up libxcb-randr0:arm64 (1.17.0-2) ... 433s Setting up libxml-commons-external-java (1.4.01-6) ... 433s Setting up libxbean-reflect-java (4.5-8) ... 433s Setting up libjackson2-core-java (2.14.1-1) ... 433s Setting up libhts3t64:arm64 (1.20+ds-1) ... 433s Setting up libharfbuzz0b:arm64 (9.0.0-1) ... 433s Setting up ncbi-vdb-data (3.0.2+dfsg-2build2) ... 433s Setting up libthai-data (0.1.29-2build1) ... 433s Setting up libcommons-math3-java (3.6.1-3) ... 433s Setting up libwayland-egl1:arm64 (1.23.0-1) ... 433s Setting up libhttpcore-java (4.4.16-1) ... 433s Setting up libjoptsimple-java (5.0.4-4) ... 433s Setting up ca-certificates-java (20240118) ... 433s No JRE found. 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Setting up openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 433s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode 433s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 433s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 433s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 433s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 433s Setting up libplexus-languages-java (1.1.1-2) ... 433s Setting up libgbm1:arm64 (24.2.3-1ubuntu1) ... 433s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 434s Setting up libstax-ex-java (1.7.8-3) ... 434s Setting up libxtst6:arm64 (2:1.2.3-1.1build1) ... 434s Setting up libxcursor1:arm64 (1:1.2.2-1) ... 434s Setting up libmaven-parent-java (43-2) ... 434s Setting up libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 434s Setting up libcommons-parent-java (56-1) ... 434s Setting up libavahi-common3:arm64 (0.8-13ubuntu6) ... 434s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 434s Setting up libsisu-inject-java (0.3.4-2) ... 434s Setting up dconf-service (0.40.0-4build2) ... 434s Setting up libciftools-java (6.0.0-1) ... 434s Setting up libcommons-lang-java (2.6-10) ... 434s Setting up libjackson2-databind-java (2.14.0-1) ... 434s Setting up libplexus-cipher-java (2.0-1) ... 434s Setting up samtools (1.20-3) ... 434s Setting up libcommons-jexl2-java (2.1.1-6) ... 434s Setting up libthai0:arm64 (0.1.29-2build1) ... 434s Setting up libsisu-plexus-java (0.3.4-3) ... 434s Setting up libstreambuffer-java (1.5.4-1.1) ... 434s Setting up libcommons-collections4-java (4.4-2) ... 434s Setting up libcommons-lang3-java (3.14.0-1) ... 434s Setting up librngom-java (2.3.0.1-10.1) ... 434s Setting up libjni-inchi-jni (0.8+dfsg-7build1) ... 434s Setting up libjgraphx-java (2.1.0.7-4) ... 434s Setting up libmbedtls14t64:arm64 (2.28.8-1) ... 434s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 434s Setting up libwayland-cursor0:arm64 (1.23.0-1) ... 434s Setting up libplexus-sec-dispatcher-java (2.0-3) ... 434s Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 434s Setting up libsnappy-java (1.1.10.5-2) ... 434s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 434s Setting up libxsom-java (2.3.0.1-10.1) ... 434s Setting up libcommons-codec-java (1.16.0-1) ... 434s Setting up libavahi-client3:arm64 (0.8-13ubuntu6) ... 434s Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 434s Setting up gtk-update-icon-cache (4.16.2+ds-2) ... 434s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 436s Regenerating fonts cache... done. 436s Setting up libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 436s Setting up libglx0:arm64 (1.7.0-1build1) ... 436s Setting up dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 436s Setting up libcommons-compress-java (1.25.0-1) ... 436s Setting up libcommons-io-java (2.16.1-1) ... 436s Setting up libpango-1.0-0:arm64 (1.54.0+ds-2) ... 436s Setting up libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 436s Setting up libcairo2:arm64 (1.18.2-2) ... 436s Setting up libmaven-resolver-java (1.6.3-1) ... 436s Setting up libgl1:arm64 (1.7.0-1build1) ... 436s Setting up libhttpclient-java (4.5.14-1) ... 436s Setting up liblightcouch-java (0.2.0-1) ... 436s Setting up libwagon-http-java (3.5.3-1) ... 436s Setting up libcairo-gobject2:arm64 (1.18.2-2) ... 436s Setting up libmaven-shared-utils-java (3.3.4-1) ... 436s Setting up libfastinfoset-java (1.2.12-3) ... 436s Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 436s Setting up libcups2t64:arm64 (2.4.10-1ubuntu2) ... 436s Setting up libgtk-3-common (3.24.43-3ubuntu2) ... 436s Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 436s Setting up libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 436s Setting up libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 436s Setting up libplexus-io-java (3.3.1-2) ... 436s Setting up liblog4j2-java (2.19.0-2) ... 436s Setting up libplexus-archiver-java (4.6.1-1) ... 436s Setting up libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 436s Setting up libhtsjdk-java (4.1.0+dfsg-2) ... 436s Setting up libbarclay-java (5.0.0+dfsg-1) ... 436s Setting up libgkl-java (0.8.11+dfsg-2build1) ... 436s Setting up libmaven-archiver-java (3.6.2-1) ... 436s Setting up libpicard-java (3.1.1+dfsg-1) ... 436s Setting up adwaita-icon-theme (47.0-1) ... 436s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 436s Setting up liberror-prone-java (2.18.0-1) ... 436s Setting up humanity-icon-theme (0.6.16) ... 436s Setting up libguava-java (32.0.1-1) ... 436s Setting up libplexus-container-default-java (2.1.1-1) ... 436s Setting up ubuntu-mono (24.04-0ubuntu1) ... 436s Setting up libguice-java (4.2.3-2) ... 436s Setting up libmaven3-core-java (3.8.8-1) ... 436s Setting up libmaven-shared-incremental-java (1.1-6) ... 436s Setting up libmaven-shared-io-java (3.0.0-4) ... 436s Setting up libplexus-compiler-java (2.13.0-1) ... 436s Setting up libmaven-compiler-plugin-java (3.10.1-2) ... 436s Setting up libjni-inchi-java (0.8+dfsg-7build1) ... 436s Setting up libmaven-file-management-java (3.0.0-1) ... 436s Setting up libjmol-java (16.2.15+dfsg-1) ... 436s Setting up libmaven-jar-plugin-java (3.3.0-2) ... 436s Setting up libcommons-text-java (1.11.0-1) ... 436s Setting up libmsgpack-java (0.9.6-1) ... 436s Setting up libmmtf-java (1.0.11-1) ... 436s Setting up libjgrapht-java (1.5.2-1) ... 436s Processing triggers for libc-bin (2.40-1ubuntu3) ... 436s Processing triggers for man-db (2.12.1-3) ... 437s Processing triggers for libglib2.0-0t64:arm64 (2.82.1-0ubuntu1) ... 437s Setting up libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 437s Processing triggers for ca-certificates-java (20240118) ... 437s Adding debian:ACCVRAIZ1.pem 437s Adding debian:AC_RAIZ_FNMT-RCM.pem 437s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 437s Adding debian:ANF_Secure_Server_Root_CA.pem 437s Adding debian:Actalis_Authentication_Root_CA.pem 437s Adding debian:AffirmTrust_Commercial.pem 437s Adding debian:AffirmTrust_Networking.pem 437s Adding debian:AffirmTrust_Premium.pem 437s Adding debian:AffirmTrust_Premium_ECC.pem 437s Adding debian:Amazon_Root_CA_1.pem 437s Adding debian:Amazon_Root_CA_2.pem 437s Adding debian:Amazon_Root_CA_3.pem 437s Adding debian:Amazon_Root_CA_4.pem 437s Adding debian:Atos_TrustedRoot_2011.pem 437s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 437s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 437s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 437s Adding debian:BJCA_Global_Root_CA1.pem 437s Adding debian:BJCA_Global_Root_CA2.pem 437s Adding debian:Baltimore_CyberTrust_Root.pem 437s Adding debian:Buypass_Class_2_Root_CA.pem 437s Adding debian:Buypass_Class_3_Root_CA.pem 437s Adding debian:CA_Disig_Root_R2.pem 437s Adding debian:CFCA_EV_ROOT.pem 437s Adding debian:COMODO_Certification_Authority.pem 437s Adding debian:COMODO_ECC_Certification_Authority.pem 437s Adding debian:COMODO_RSA_Certification_Authority.pem 437s Adding debian:Certainly_Root_E1.pem 437s Adding debian:Certainly_Root_R1.pem 437s Adding debian:Certigna.pem 437s Adding debian:Certigna_Root_CA.pem 437s Adding debian:Certum_EC-384_CA.pem 437s Adding debian:Certum_Trusted_Network_CA.pem 437s Adding debian:Certum_Trusted_Network_CA_2.pem 437s Adding debian:Certum_Trusted_Root_CA.pem 437s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 437s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 437s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 437s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 438s Adding debian:Comodo_AAA_Services_root.pem 438s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 438s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 438s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 438s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 438s Adding debian:DigiCert_Assured_ID_Root_CA.pem 438s Adding debian:DigiCert_Assured_ID_Root_G2.pem 438s Adding debian:DigiCert_Assured_ID_Root_G3.pem 438s Adding debian:DigiCert_Global_Root_CA.pem 438s Adding debian:DigiCert_Global_Root_G2.pem 438s Adding debian:DigiCert_Global_Root_G3.pem 438s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 438s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 438s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 438s Adding debian:DigiCert_Trusted_Root_G4.pem 438s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 438s Adding debian:Entrust_Root_Certification_Authority.pem 438s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 438s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 438s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 438s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 438s Adding debian:GLOBALTRUST_2020.pem 438s Adding debian:GTS_Root_R1.pem 438s Adding debian:GTS_Root_R2.pem 438s Adding debian:GTS_Root_R3.pem 438s Adding debian:GTS_Root_R4.pem 438s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 438s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 438s Adding debian:GlobalSign_Root_CA.pem 438s Adding debian:GlobalSign_Root_CA_-_R3.pem 438s Adding debian:GlobalSign_Root_CA_-_R6.pem 438s Adding debian:GlobalSign_Root_E46.pem 438s Adding debian:GlobalSign_Root_R46.pem 438s Adding debian:Go_Daddy_Class_2_CA.pem 438s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 438s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 438s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 438s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 438s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 438s Adding debian:HiPKI_Root_CA_-_G1.pem 438s Adding debian:Hongkong_Post_Root_CA_3.pem 438s Adding debian:ISRG_Root_X1.pem 438s Adding debian:ISRG_Root_X2.pem 438s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 438s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 438s Adding debian:Izenpe.com.pem 438s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 438s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 438s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 438s Adding debian:NAVER_Global_Root_Certification_Authority.pem 438s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 438s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 438s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 438s Adding debian:QuoVadis_Root_CA_1_G3.pem 438s Adding debian:QuoVadis_Root_CA_2.pem 438s Adding debian:QuoVadis_Root_CA_2_G3.pem 438s Adding debian:QuoVadis_Root_CA_3.pem 438s Adding debian:QuoVadis_Root_CA_3_G3.pem 438s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 438s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 438s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 438s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 438s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 438s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 438s Adding debian:SZAFIR_ROOT_CA2.pem 438s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 438s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 438s Adding debian:SecureSign_RootCA11.pem 438s Adding debian:SecureTrust_CA.pem 438s Adding debian:Secure_Global_CA.pem 438s Adding debian:Security_Communication_ECC_RootCA1.pem 438s Adding debian:Security_Communication_RootCA2.pem 438s Adding debian:Security_Communication_RootCA3.pem 438s Adding debian:Security_Communication_Root_CA.pem 438s Adding debian:Starfield_Class_2_CA.pem 438s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 438s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 438s Adding debian:SwissSign_Gold_CA_-_G2.pem 438s Adding debian:SwissSign_Silver_CA_-_G2.pem 438s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 438s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 438s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 438s Adding debian:TWCA_Global_Root_CA.pem 438s Adding debian:TWCA_Root_Certification_Authority.pem 438s Adding debian:TeliaSonera_Root_CA_v1.pem 438s Adding debian:Telia_Root_CA_v2.pem 438s Adding debian:TrustAsia_Global_Root_CA_G3.pem 438s Adding debian:TrustAsia_Global_Root_CA_G4.pem 438s Adding debian:Trustwave_Global_Certification_Authority.pem 438s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 438s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 438s Adding debian:TunTrust_Root_CA.pem 438s Adding debian:UCA_Extended_Validation_Root.pem 438s Adding debian:UCA_Global_G2_Root.pem 438s Adding debian:USERTrust_ECC_Certification_Authority.pem 438s Adding debian:USERTrust_RSA_Certification_Authority.pem 438s Adding debian:XRamp_Global_CA_Root.pem 438s Adding debian:certSIGN_ROOT_CA.pem 438s Adding debian:certSIGN_Root_CA_G2.pem 438s Adding debian:e-Szigno_Root_CA_2017.pem 438s Adding debian:ePKI_Root_Certification_Authority.pem 438s Adding debian:emSign_ECC_Root_CA_-_C3.pem 438s Adding debian:emSign_ECC_Root_CA_-_G3.pem 438s Adding debian:emSign_Root_CA_-_C1.pem 438s Adding debian:emSign_Root_CA_-_G1.pem 438s Adding debian:vTrus_ECC_Root_CA.pem 438s Adding debian:vTrus_Root_CA.pem 438s done. 438s Setting up default-jre-headless (2:1.21-76) ... 438s Setting up openjdk-21-jre:arm64 (21.0.5+11-1) ... 438s Setting up ant (1.10.14-1) ... 438s Setting up default-jre (2:1.21-76) ... 438s Setting up picard-tools (3.1.1+dfsg-1) ... 438s Setting up ant-optional (1.10.14-1) ... 438s Setting up libistack-commons-java (3.0.6-5) ... 438s Setting up libcodemodel-java (2.6+jaxb2.3.0.1-10.1) ... 438s Setting up libtxw2-java (2.3.0.1-10.1) ... 438s Setting up libjaxb-java (2.3.0.1-10.1) ... 438s Setting up libbiojava6-java (6.1.0+dfsg-4) ... 438s Setting up drop-seq-tools (3.0.0+dfsg-1) ... 438s Setting up autopkgtest-satdep (0) ... 438s Processing triggers for libc-bin (2.40-1ubuntu3) ... 453s (Reading database ... 97885 files and directories currently installed.) 453s Removing autopkgtest-satdep (0) ... 461s autopkgtest [19:11:22]: test drop-seq-run-unit-test: [----------------------- 462s Test 1 462s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 463s INFO 2024-11-01 19:11:24 FilterBam 463s 463s ********** NOTE: Picard's command line syntax is changing. 463s ********** 463s ********** For more information, please see: 463s ********** 463s https://github.com/broadinstitute/picard/wiki/Command-Line-Syntax-Transition-For-Users-(Pre-Transition) 463s ********** 463s ********** The command line looks like this in the new syntax: 463s ********** 463s ********** FilterBam -TAG_REJECT XQ -INPUT org/broadinstitute/dropseq/readtrimming/N701.subset.tagged_filtered.sam -OUTPUT out/FilterBam.bam 463s ********** 463s 463s 463s 19:11:24.219 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 463s 19:11:24.221 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 463s 19:11:24.222 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 463s 19:11:24.224 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 463s 19:11:24.224 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 463s 19:11:24.225 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 463s [Fri Nov 01 19:11:24 UTC 2024] FilterBam INPUT=org/broadinstitute/dropseq/readtrimming/N701.subset.tagged_filtered.sam OUTPUT=out/FilterBam.bam TAG_REJECT=[XQ] FILTER_PCR_DUPES=false RETAIN_ONLY_PRIMARY_READS=false DROP_REJECTED_REF=false VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false 463s [Fri Nov 01 19:11:24 UTC 2024] Executing as ubuntu@autopkgtest on Linux 6.11.0-8-generic aarch64; OpenJDK 64-Bit Server VM 21.0.5+11-Ubuntu-1; Deflater: Jdk; Inflater: Jdk; Provider GCS is available; Picard version: 2.5.4() 463s 19:11:24.269 WARN IntelDeflaterFactory - Intel Deflater not supported, using Java.util.zip.Deflater 463s INFO 2024-11-01 19:11:24 FilterBam Total 995 reads processed. 995 reads accepted; 0 reads rejected. 463s [Fri Nov 01 19:11:24 UTC 2024] org.broadinstitute.dropseqrna.utils.FilterBam done. Elapsed time: 0.00 minutes. 463s Runtime.totalMemory()=142606336 463s Passed 463s 463s Test 2 463s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 464s INFO 2024-11-01 19:11:25 TrimStartingSequence 464s 464s ********** NOTE: Picard's command line syntax is changing. 464s ********** 464s ********** For more information, please see: 464s ********** 464s https://github.com/broadinstitute/picard/wiki/Command-Line-Syntax-Transition-For-Users-(Pre-Transition) 464s ********** 464s ********** The command line looks like this in the new syntax: 464s ********** 464s ********** TrimStartingSequence -INPUT out/FilterBam.bam -OUTPUT out/TrimStartingSequence.bam -OUTPUT_SUMMARY out/TrimStartingSequence.summary.txt -SEQUENCE AAGCAGTGGTATCAACGCAGAGTGAATGGG -MISMATCHES 0 -NUM_BASES 5 464s ********** 464s 464s 464s 19:11:25.394 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 464s 19:11:25.397 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 464s 19:11:25.397 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 464s 19:11:25.399 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 464s 19:11:25.400 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 464s 19:11:25.400 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 464s [Fri Nov 01 19:11:25 UTC 2024] TrimStartingSequence INPUT=out/FilterBam.bam OUTPUT=out/TrimStartingSequence.bam OUTPUT_SUMMARY=out/TrimStartingSequence.summary.txt SEQUENCE=AAGCAGTGGTATCAACGCAGAGTGAATGGG MISMATCHES=0 NUM_BASES=5 LEGACY=false TRIM_TAG=ZS VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false 464s [Fri Nov 01 19:11:25 UTC 2024] Executing as ubuntu@autopkgtest on Linux 6.11.0-8-generic aarch64; OpenJDK 64-Bit Server VM 21.0.5+11-Ubuntu-1; Deflater: Jdk; Inflater: Jdk; Provider GCS is available; Picard version: 2.5.4() 464s 19:11:25.416 WARN IntelInflaterFactory - IntelInflater is not supported, using Java.util.zip.Inflater 464s 19:11:25.418 WARN IntelInflaterFactory - IntelInflater is not supported, using Java.util.zip.Inflater 464s 19:11:25.437 WARN IntelDeflaterFactory - Intel Deflater not supported, using Java.util.zip.Deflater 464s INFO 2024-11-01 19:11:25 TrimStartingSequence Number of reads trimmed: 210 total reads: 995 464s [Fri Nov 01 19:11:25 UTC 2024] org.broadinstitute.dropseqrna.readtrimming.TrimStartingSequence done. Elapsed time: 0.00 minutes. 464s Runtime.totalMemory()=142606336 464s Passed 464s 464s Test 3 464s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 465s INFO 2024-11-01 19:11:26 PolyATrimmer 465s 465s ********** NOTE: Picard's command line syntax is changing. 465s ********** 465s ********** For more information, please see: 465s ********** 465s https://github.com/broadinstitute/picard/wiki/Command-Line-Syntax-Transition-For-Users-(Pre-Transition) 465s ********** 465s ********** The command line looks like this in the new syntax: 465s ********** 465s ********** PolyATrimmer -INPUT out/TrimStartingSequence.bam -OUTPUT out/PolyATrimmer.bam -OUTPUT_SUMMARY out/PolyATrimmer.summary.bam -MISMATCHES 0 -NUM_BASES 6 -USE_NEW_TRIMMER true 465s ********** 465s 465s 465s 19:11:26.551 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 465s 19:11:26.553 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 465s 19:11:26.554 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 465s 19:11:26.555 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 465s 19:11:26.556 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 465s 19:11:26.556 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 465s [Fri Nov 01 19:11:26 UTC 2024] PolyATrimmer INPUT=out/TrimStartingSequence.bam OUTPUT=out/PolyATrimmer.bam OUTPUT_SUMMARY=out/PolyATrimmer.summary.bam USE_NEW_TRIMMER=true MISMATCHES=0 NUM_BASES=6 TRIM_TAG=ZP ADAPTER=~XM~XC MAX_ADAPTER_ERROR_RATE=0.1 MIN_ADAPTER_MATCH=4 MIN_POLY_A_LENGTH=20 MIN_POLY_A_LENGTH_NO_ADAPTER_MATCH=6 DUBIOUS_ADAPTER_MATCH_LENGTH=6 MAX_POLY_A_ERROR_RATE=0.1 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false 465s [Fri Nov 01 19:11:26 UTC 2024] Executing as ubuntu@autopkgtest on Linux 6.11.0-8-generic aarch64; OpenJDK 64-Bit Server VM 21.0.5+11-Ubuntu-1; Deflater: Jdk; Inflater: Jdk; Provider GCS is available; Picard version: 2.5.4() 465s 19:11:26.569 WARN IntelInflaterFactory - IntelInflater is not supported, using Java.util.zip.Inflater 465s 19:11:26.572 WARN IntelInflaterFactory - IntelInflater is not supported, using Java.util.zip.Inflater 465s 19:11:26.592 WARN IntelDeflaterFactory - Intel Deflater not supported, using Java.util.zip.Deflater 465s INFO 2024-11-01 19:11:26 PolyATrimmer Total 995 reads processed. 465s INFO 2024-11-01 19:11:26 PolyATrimmer Number of reads trimmed: 290 465s INFO 2024-11-01 19:11:26 PolyATrimmer Number of reads completely trimmed: 6 465s [Fri Nov 01 19:11:26 UTC 2024] org.broadinstitute.dropseqrna.readtrimming.PolyATrimmer done. Elapsed time: 0.00 minutes. 465s Runtime.totalMemory()=142606336 465s Passed 465s 466s autopkgtest [19:11:27]: test drop-seq-run-unit-test: -----------------------] 467s drop-seq-run-unit-test PASS 467s autopkgtest [19:11:28]: test drop-seq-run-unit-test: - - - - - - - - - - results - - - - - - - - - - 468s autopkgtest [19:11:29]: test fastqc-run-unit-test: preparing testbed 548s autopkgtest [19:12:49]: testbed dpkg architecture: arm64 548s autopkgtest [19:12:49]: testbed apt version: 2.9.8 548s autopkgtest [19:12:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 549s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 549s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [44.0 kB] 550s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [183 kB] 550s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2775 kB] 550s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 550s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [241 kB] 550s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 550s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [2023 kB] 550s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [36.5 kB] 550s Fetched 5433 kB in 1s (3938 kB/s) 551s Reading package lists... 553s Reading package lists... 553s Building dependency tree... 553s Reading state information... 554s Calculating upgrade... 554s The following packages will be upgraded: 554s libevdev2 libftdi1-2 libinih1 nano python3-lazr.uri 555s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 555s Need to get 374 kB of archives. 555s After this operation, 17.4 kB of additional disk space will be used. 555s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libevdev2 arm64 1.13.3+dfsg-1 [36.0 kB] 555s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 nano arm64 8.2-1 [289 kB] 555s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libftdi1-2 arm64 1.5-7 [28.4 kB] 555s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libinih1 arm64 58-1ubuntu1 [7412 B] 555s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lazr.uri all 1.0.6-4 [13.6 kB] 555s Fetched 374 kB in 0s (792 kB/s) 556s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 556s Preparing to unpack .../libevdev2_1.13.3+dfsg-1_arm64.deb ... 556s Unpacking libevdev2:arm64 (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 556s Preparing to unpack .../archives/nano_8.2-1_arm64.deb ... 556s Unpacking nano (8.2-1) over (8.1-1) ... 556s Preparing to unpack .../libftdi1-2_1.5-7_arm64.deb ... 556s Unpacking libftdi1-2:arm64 (1.5-7) over (1.5-6build5) ... 556s Preparing to unpack .../libinih1_58-1ubuntu1_arm64.deb ... 556s Unpacking libinih1:arm64 (58-1ubuntu1) over (55-1ubuntu2) ... 556s Preparing to unpack .../python3-lazr.uri_1.0.6-4_all.deb ... 556s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 556s Setting up libinih1:arm64 (58-1ubuntu1) ... 556s Setting up python3-lazr.uri (1.0.6-4) ... 556s Setting up libftdi1-2:arm64 (1.5-7) ... 556s Setting up nano (8.2-1) ... 556s Setting up libevdev2:arm64 (1.13.3+dfsg-1) ... 556s Processing triggers for man-db (2.12.1-3) ... 557s Processing triggers for install-info (7.1.1-1) ... 558s Processing triggers for libc-bin (2.40-1ubuntu3) ... 558s Reading package lists... 558s Building dependency tree... 558s Reading state information... 559s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 560s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 560s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 560s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 560s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 562s Reading package lists... 562s Reading package lists... 562s Building dependency tree... 562s Reading state information... 563s Calculating upgrade... 564s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 564s Reading package lists... 565s Building dependency tree... 565s Reading state information... 566s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 570s Reading package lists... 571s Building dependency tree... 571s Reading state information... 572s Starting pkgProblemResolver with broken count: 0 572s Starting 2 pkgProblemResolver with broken count: 0 572s Done 574s The following additional packages will be installed: 574s adwaita-icon-theme at-spi2-common ca-certificates-java 574s dconf-gsettings-backend dconf-service default-jre default-jre-headless 574s fastqc fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 574s gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme java-common 574s libapache-pom-java libasound2-data libasound2t64 libatk-bridge2.0-0t64 574s libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data 574s libavahi-common3 libcairo-gobject2 libcairo2 libcolord2 574s libcommons-compress-java libcommons-jexl2-java libcommons-logging-java 574s libcommons-math3-java libcommons-parent-java libcups2t64 libdatrie1 574s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 libepoxy0 574s libfindbin-libs-perl libfontconfig1 libgbm1 libgdk-pixbuf-2.0-0 574s libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libglapi-mesa 574s libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgtk-3-0t64 libgtk-3-common 574s libharfbuzz0b libhtsjdk-java libjbig0 libjbzip2-java libjpeg-turbo8 libjpeg8 574s liblcms2-2 liblerc4 libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 574s libmjson-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni 574s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 574s libpixman-1-0 librhino-java libsharpyuv0 libsnappy-java libsnappy-jni 574s libsnappy1v5 libthai-data libthai0 libtiff6 libvulkan1 libwayland-client0 574s libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libx11-xcb1 574s libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 574s libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 574s libxcursor1 libxdamage1 libxfixes3 libxi6 libxinerama1 libxrandr2 574s libxrender1 libxshmfence1 libxtst6 libxxf86vm1 mesa-libgallium ncbi-vdb-data 574s openjdk-21-jre openjdk-21-jre-headless ubuntu-mono unzip x11-common 574s Suggested packages: 574s alsa-utils libasound2-plugins colord libasm-java libxz-java 574s libavalon-framework-java libexcalibur-logkit-java liblog4j1.2-java 574s cups-common gvfs picard-tools liblcms2-utils libngs-java-doc pcscd rhino 574s libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho 574s fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic zip 574s Recommended packages: 574s librsvg2-common alsa-ucm-conf alsa-topology-conf at-spi2-core 574s libgdk-pixbuf2.0-bin libgl1-amber-dri libgtk-3-bin mesa-vulkan-drivers 574s | vulkan-icd libatk-wrapper-java-jni fonts-dejavu-extra 574s The following NEW packages will be installed: 574s adwaita-icon-theme at-spi2-common autopkgtest-satdep ca-certificates-java 574s dconf-gsettings-backend dconf-service default-jre default-jre-headless 574s fastqc fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 574s gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme java-common 574s libapache-pom-java libasound2-data libasound2t64 libatk-bridge2.0-0t64 574s libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data 574s libavahi-common3 libcairo-gobject2 libcairo2 libcolord2 574s libcommons-compress-java libcommons-jexl2-java libcommons-logging-java 574s libcommons-math3-java libcommons-parent-java libcups2t64 libdatrie1 574s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 libepoxy0 574s libfindbin-libs-perl libfontconfig1 libgbm1 libgdk-pixbuf-2.0-0 574s libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libglapi-mesa 574s libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgtk-3-0t64 libgtk-3-common 574s libharfbuzz0b libhtsjdk-java libjbig0 libjbzip2-java libjpeg-turbo8 libjpeg8 574s liblcms2-2 liblerc4 libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 574s libmjson-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni 574s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 574s libpixman-1-0 librhino-java libsharpyuv0 libsnappy-java libsnappy-jni 574s libsnappy1v5 libthai-data libthai0 libtiff6 libvulkan1 libwayland-client0 574s libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libx11-xcb1 574s libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 574s libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 574s libxcursor1 libxdamage1 libxfixes3 libxi6 libxinerama1 libxrandr2 574s libxrender1 libxshmfence1 libxtst6 libxxf86vm1 mesa-libgallium ncbi-vdb-data 574s openjdk-21-jre openjdk-21-jre-headless ubuntu-mono unzip x11-common 574s 0 upgraded, 119 newly installed, 0 to remove and 0 not upgraded. 574s Need to get 77.1 MB/77.1 MB of archives. 574s After this operation, 336 MB of additional disk space will be used. 574s Get:1 /tmp/autopkgtest.d7OWAi/4-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [708 B] 574s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 574s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 574s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 574s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.21-1 [46.2 kB] 574s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 574s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 575s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 575s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 575s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 575s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1 [145 kB] 575s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 gtk-update-icon-cache arm64 4.16.2+ds-2 [51.1 kB] 575s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 hicolor-icon-theme all 0.18-1 [13.5 kB] 575s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 humanity-icon-theme all 0.6.16 [1282 kB] 575s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 ubuntu-mono all 24.04-0ubuntu1 [151 kB] 575s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 adwaita-icon-theme all 47.0-1 [525 kB] 575s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 at-spi2-common all 2.54.0-1 [8774 B] 575s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 ca-certificates-java all 20240118 [11.6 kB] 575s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libdconf1 arm64 0.40.0-4build2 [39.8 kB] 575s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-service arm64 0.40.0-4build2 [26.9 kB] 575s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-gsettings-backend arm64 0.40.0-4build2 [22.0 kB] 575s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 java-common all 0.76 [6852 B] 575s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.14-2build1 [161 kB] 575s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcsclite1 arm64 2.3.0-1 [24.4 kB] 575s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre-headless arm64 21.0.5+11-1 [45.7 MB] 576s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre-headless arm64 2:1.21-76 [3176 B] 576s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [55.0 kB] 576s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 576s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [80.2 kB] 576s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [66.6 kB] 576s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 576s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 576s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 576s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 576s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.42.2-1build1 [204 kB] 576s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 576s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 576s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 576s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 576s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo-gobject2 arm64 1.18.2-2 [127 kB] 576s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolord2 arm64 1.4.7-1build2 [149 kB] 576s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common-data arm64 0.8-13ubuntu6 [29.6 kB] 576s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common3 arm64 0.8-13ubuntu6 [23.3 kB] 576s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-client3 arm64 0.8-13ubuntu6 [27.2 kB] 576s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libcups2t64 arm64 2.4.10-1ubuntu2 [271 kB] 576s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libepoxy0 arm64 1.5.10-1build1 [240 kB] 576s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 576s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 9.0.0-1 [486 kB] 576s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 576s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 576s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 576s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 576s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-2 [233 kB] 576s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-2 [48.8 kB] 576s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-2 [27.5 kB] 576s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB] 576s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-cursor0 arm64 1.23.0-1 [10.6 kB] 576s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-egl1 arm64 1.23.0-1 [5636 B] 576s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcomposite1 arm64 1:0.4.5-1build3 [6336 B] 576s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB] 576s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcursor1 arm64 1:1.2.2-1 [21.2 kB] 576s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libxdamage1 arm64 1:1.1.6-1build1 [6236 B] 576s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libxinerama1 arm64 2:1.1.4-3build1 [6394 B] 576s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrandr2 arm64 2:1.5.4-1 [19.6 kB] 577s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-common all 3.24.43-3ubuntu2 [1202 kB] 577s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-0t64 arm64 3.24.43-3ubuntu2 [2898 kB] 577s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB] 577s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB] 577s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.7-1build1 [7870 B] 577s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B] 577s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B] 577s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB] 577s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B] 577s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB] 577s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B] 577s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB] 577s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B] 577s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B] 577s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.122-1 [20.9 kB] 577s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.122-1 [20.8 kB] 577s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB] 577s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.290.0-1 [153 kB] 577s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB] 577s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB] 577s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB] 577s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB] 577s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB] 577s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB] 577s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2-data all 1.2.12-1 [21.0 kB] 577s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2t64 arm64 1.2.12-1 [384 kB] 577s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 577s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 577s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libxtst6 arm64 2:1.2.3-1.1build1 [13.0 kB] 577s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre arm64 21.0.5+11-1 [221 kB] 577s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre arm64 2:1.21-76 [918 B] 577s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-math3-java all 3.6.1-3 [2016 kB] 577s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjbzip2-java all 0.9.1-8 [42.4 kB] 577s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapache-pom-java all 33-2 [5874 B] 577s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-parent-java all 56-1 [10.7 kB] 577s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-compress-java all 1.25.0-1 [612 kB] 577s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 577s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-jexl2-java all 2.1.1-6 [250 kB] 577s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmjson-java all 1.4.0-3 [60.4 kB] 577s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedcrypto7t64 arm64 2.28.8-1 [209 kB] 578s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedx509-1t64 arm64 2.28.8-1 [47.2 kB] 578s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedtls14t64 arm64 2.28.8-1 [82.2 kB] 578s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 ncbi-vdb-data all 3.0.2+dfsg-2build2 [67.5 kB] 578s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-vdb3 arm64 3.0.2+dfsg-2build2 [1143 kB] 578s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-ngs3 arm64 3.0.3+dfsg-9ubuntu1 [145 kB] 578s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-jni arm64 3.0.3+dfsg-9ubuntu1 [4844 B] 578s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-java arm64 3.0.3+dfsg-9ubuntu1 [91.1 kB] 578s Get:112 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 librhino-java all 1.7.15-1 [1354 kB] 578s Get:113 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 578s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-jni arm64 1.1.10.5-2 [6618 B] 578s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-java all 1.1.10.5-2 [83.7 kB] 578s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtsjdk-java all 4.1.0+dfsg-2 [1823 kB] 578s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfindbin-libs-perl all 3.0.2-1 [22.3 kB] 578s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 fastqc all 0.12.1+dfsg-4 [377 kB] 578s Get:119 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 579s Fetched 77.1 MB in 4s (19.8 MB/s) 579s Selecting previously unselected package libgdk-pixbuf2.0-common. 579s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 579s Preparing to unpack .../000-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 579s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 579s Selecting previously unselected package libjpeg-turbo8:arm64. 579s Preparing to unpack .../001-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 579s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 579s Selecting previously unselected package libjpeg8:arm64. 579s Preparing to unpack .../002-libjpeg8_8c-2ubuntu11_arm64.deb ... 579s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 579s Selecting previously unselected package libdeflate0:arm64. 579s Preparing to unpack .../003-libdeflate0_1.21-1_arm64.deb ... 579s Unpacking libdeflate0:arm64 (1.21-1) ... 579s Selecting previously unselected package libjbig0:arm64. 579s Preparing to unpack .../004-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 579s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 579s Selecting previously unselected package liblerc4:arm64. 579s Preparing to unpack .../005-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 579s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 579s Selecting previously unselected package libsharpyuv0:arm64. 579s Preparing to unpack .../006-libsharpyuv0_1.4.0-0.1_arm64.deb ... 579s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 579s Selecting previously unselected package libwebp7:arm64. 579s Preparing to unpack .../007-libwebp7_1.4.0-0.1_arm64.deb ... 579s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 579s Selecting previously unselected package libtiff6:arm64. 579s Preparing to unpack .../008-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 579s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 579s Selecting previously unselected package libgdk-pixbuf-2.0-0:arm64. 579s Preparing to unpack .../009-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_arm64.deb ... 579s Unpacking libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 579s Selecting previously unselected package gtk-update-icon-cache. 579s Preparing to unpack .../010-gtk-update-icon-cache_4.16.2+ds-2_arm64.deb ... 579s No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. 579s No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. 579s Unpacking gtk-update-icon-cache (4.16.2+ds-2) ... 579s Selecting previously unselected package hicolor-icon-theme. 579s Preparing to unpack .../011-hicolor-icon-theme_0.18-1_all.deb ... 579s Unpacking hicolor-icon-theme (0.18-1) ... 579s Selecting previously unselected package humanity-icon-theme. 579s Preparing to unpack .../012-humanity-icon-theme_0.6.16_all.deb ... 579s Unpacking humanity-icon-theme (0.6.16) ... 580s Selecting previously unselected package ubuntu-mono. 580s Preparing to unpack .../013-ubuntu-mono_24.04-0ubuntu1_all.deb ... 580s Unpacking ubuntu-mono (24.04-0ubuntu1) ... 580s Selecting previously unselected package adwaita-icon-theme. 580s Preparing to unpack .../014-adwaita-icon-theme_47.0-1_all.deb ... 580s Unpacking adwaita-icon-theme (47.0-1) ... 581s Selecting previously unselected package at-spi2-common. 581s Preparing to unpack .../015-at-spi2-common_2.54.0-1_all.deb ... 581s Unpacking at-spi2-common (2.54.0-1) ... 581s Selecting previously unselected package ca-certificates-java. 581s Preparing to unpack .../016-ca-certificates-java_20240118_all.deb ... 581s Unpacking ca-certificates-java (20240118) ... 581s Selecting previously unselected package libdconf1:arm64. 581s Preparing to unpack .../017-libdconf1_0.40.0-4build2_arm64.deb ... 581s Unpacking libdconf1:arm64 (0.40.0-4build2) ... 581s Selecting previously unselected package dconf-service. 581s Preparing to unpack .../018-dconf-service_0.40.0-4build2_arm64.deb ... 581s Unpacking dconf-service (0.40.0-4build2) ... 581s Selecting previously unselected package dconf-gsettings-backend:arm64. 581s Preparing to unpack .../019-dconf-gsettings-backend_0.40.0-4build2_arm64.deb ... 581s Unpacking dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 581s Selecting previously unselected package java-common. 581s Preparing to unpack .../020-java-common_0.76_all.deb ... 581s Unpacking java-common (0.76) ... 581s Selecting previously unselected package liblcms2-2:arm64. 581s Preparing to unpack .../021-liblcms2-2_2.14-2build1_arm64.deb ... 581s Unpacking liblcms2-2:arm64 (2.14-2build1) ... 581s Selecting previously unselected package libpcsclite1:arm64. 581s Preparing to unpack .../022-libpcsclite1_2.3.0-1_arm64.deb ... 581s Unpacking libpcsclite1:arm64 (2.3.0-1) ... 581s Selecting previously unselected package openjdk-21-jre-headless:arm64. 581s Preparing to unpack .../023-openjdk-21-jre-headless_21.0.5+11-1_arm64.deb ... 581s Unpacking openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 582s Selecting previously unselected package default-jre-headless. 582s Preparing to unpack .../024-default-jre-headless_2%3a1.21-76_arm64.deb ... 582s Unpacking default-jre-headless (2:1.21-76) ... 582s Selecting previously unselected package libatk1.0-0t64:arm64. 582s Preparing to unpack .../025-libatk1.0-0t64_2.54.0-1_arm64.deb ... 582s Unpacking libatk1.0-0t64:arm64 (2.54.0-1) ... 582s Selecting previously unselected package libxi6:arm64. 582s Preparing to unpack .../026-libxi6_2%3a1.8.2-1_arm64.deb ... 582s Unpacking libxi6:arm64 (2:1.8.2-1) ... 582s Selecting previously unselected package libatspi2.0-0t64:arm64. 582s Preparing to unpack .../027-libatspi2.0-0t64_2.54.0-1_arm64.deb ... 582s Unpacking libatspi2.0-0t64:arm64 (2.54.0-1) ... 582s Selecting previously unselected package libatk-bridge2.0-0t64:arm64. 582s Preparing to unpack .../028-libatk-bridge2.0-0t64_2.54.0-1_arm64.deb ... 582s Unpacking libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 582s Selecting previously unselected package fonts-dejavu-mono. 582s Preparing to unpack .../029-fonts-dejavu-mono_2.37-8_all.deb ... 582s Unpacking fonts-dejavu-mono (2.37-8) ... 582s Selecting previously unselected package fonts-dejavu-core. 582s Preparing to unpack .../030-fonts-dejavu-core_2.37-8_all.deb ... 582s Unpacking fonts-dejavu-core (2.37-8) ... 583s Selecting previously unselected package fontconfig-config. 583s Preparing to unpack .../031-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 583s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 583s Selecting previously unselected package libfontconfig1:arm64. 583s Preparing to unpack .../032-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 583s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 583s Selecting previously unselected package libpixman-1-0:arm64. 583s Preparing to unpack .../033-libpixman-1-0_0.42.2-1build1_arm64.deb ... 583s Unpacking libpixman-1-0:arm64 (0.42.2-1build1) ... 583s Selecting previously unselected package libxcb-render0:arm64. 583s Preparing to unpack .../034-libxcb-render0_1.17.0-2_arm64.deb ... 583s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 583s Selecting previously unselected package libxcb-shm0:arm64. 583s Preparing to unpack .../035-libxcb-shm0_1.17.0-2_arm64.deb ... 583s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 583s Selecting previously unselected package libxrender1:arm64. 583s Preparing to unpack .../036-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 583s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 583s Selecting previously unselected package libcairo2:arm64. 583s Preparing to unpack .../037-libcairo2_1.18.2-2_arm64.deb ... 583s Unpacking libcairo2:arm64 (1.18.2-2) ... 583s Selecting previously unselected package libcairo-gobject2:arm64. 583s Preparing to unpack .../038-libcairo-gobject2_1.18.2-2_arm64.deb ... 583s Unpacking libcairo-gobject2:arm64 (1.18.2-2) ... 583s Selecting previously unselected package libcolord2:arm64. 583s Preparing to unpack .../039-libcolord2_1.4.7-1build2_arm64.deb ... 583s Unpacking libcolord2:arm64 (1.4.7-1build2) ... 583s Selecting previously unselected package libavahi-common-data:arm64. 583s Preparing to unpack .../040-libavahi-common-data_0.8-13ubuntu6_arm64.deb ... 583s Unpacking libavahi-common-data:arm64 (0.8-13ubuntu6) ... 583s Selecting previously unselected package libavahi-common3:arm64. 583s Preparing to unpack .../041-libavahi-common3_0.8-13ubuntu6_arm64.deb ... 583s Unpacking libavahi-common3:arm64 (0.8-13ubuntu6) ... 583s Selecting previously unselected package libavahi-client3:arm64. 583s Preparing to unpack .../042-libavahi-client3_0.8-13ubuntu6_arm64.deb ... 583s Unpacking libavahi-client3:arm64 (0.8-13ubuntu6) ... 583s Selecting previously unselected package libcups2t64:arm64. 583s Preparing to unpack .../043-libcups2t64_2.4.10-1ubuntu2_arm64.deb ... 583s Unpacking libcups2t64:arm64 (2.4.10-1ubuntu2) ... 583s Selecting previously unselected package libepoxy0:arm64. 583s Preparing to unpack .../044-libepoxy0_1.5.10-1build1_arm64.deb ... 583s Unpacking libepoxy0:arm64 (1.5.10-1build1) ... 583s Selecting previously unselected package libgraphite2-3:arm64. 583s Preparing to unpack .../045-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 583s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 583s Selecting previously unselected package libharfbuzz0b:arm64. 583s Preparing to unpack .../046-libharfbuzz0b_9.0.0-1_arm64.deb ... 583s Unpacking libharfbuzz0b:arm64 (9.0.0-1) ... 583s Selecting previously unselected package fontconfig. 583s Preparing to unpack .../047-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 583s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 584s Selecting previously unselected package libthai-data. 584s Preparing to unpack .../048-libthai-data_0.1.29-2build1_all.deb ... 584s Unpacking libthai-data (0.1.29-2build1) ... 584s Selecting previously unselected package libdatrie1:arm64. 584s Preparing to unpack .../049-libdatrie1_0.2.13-3build1_arm64.deb ... 584s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 584s Selecting previously unselected package libthai0:arm64. 584s Preparing to unpack .../050-libthai0_0.1.29-2build1_arm64.deb ... 584s Unpacking libthai0:arm64 (0.1.29-2build1) ... 584s Selecting previously unselected package libpango-1.0-0:arm64. 584s Preparing to unpack .../051-libpango-1.0-0_1.54.0+ds-2_arm64.deb ... 584s Unpacking libpango-1.0-0:arm64 (1.54.0+ds-2) ... 584s Selecting previously unselected package libpangoft2-1.0-0:arm64. 584s Preparing to unpack .../052-libpangoft2-1.0-0_1.54.0+ds-2_arm64.deb ... 584s Unpacking libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 584s Selecting previously unselected package libpangocairo-1.0-0:arm64. 584s Preparing to unpack .../053-libpangocairo-1.0-0_1.54.0+ds-2_arm64.deb ... 584s Unpacking libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 584s Selecting previously unselected package libwayland-client0:arm64. 584s Preparing to unpack .../054-libwayland-client0_1.23.0-1_arm64.deb ... 584s Unpacking libwayland-client0:arm64 (1.23.0-1) ... 584s Selecting previously unselected package libwayland-cursor0:arm64. 584s Preparing to unpack .../055-libwayland-cursor0_1.23.0-1_arm64.deb ... 584s Unpacking libwayland-cursor0:arm64 (1.23.0-1) ... 584s Selecting previously unselected package libwayland-egl1:arm64. 584s Preparing to unpack .../056-libwayland-egl1_1.23.0-1_arm64.deb ... 584s Unpacking libwayland-egl1:arm64 (1.23.0-1) ... 584s Selecting previously unselected package libxcomposite1:arm64. 584s Preparing to unpack .../057-libxcomposite1_1%3a0.4.5-1build3_arm64.deb ... 584s Unpacking libxcomposite1:arm64 (1:0.4.5-1build3) ... 584s Selecting previously unselected package libxfixes3:arm64. 584s Preparing to unpack .../058-libxfixes3_1%3a6.0.0-2build1_arm64.deb ... 584s Unpacking libxfixes3:arm64 (1:6.0.0-2build1) ... 584s Selecting previously unselected package libxcursor1:arm64. 584s Preparing to unpack .../059-libxcursor1_1%3a1.2.2-1_arm64.deb ... 584s Unpacking libxcursor1:arm64 (1:1.2.2-1) ... 584s Selecting previously unselected package libxdamage1:arm64. 584s Preparing to unpack .../060-libxdamage1_1%3a1.1.6-1build1_arm64.deb ... 584s Unpacking libxdamage1:arm64 (1:1.1.6-1build1) ... 584s Selecting previously unselected package libxinerama1:arm64. 584s Preparing to unpack .../061-libxinerama1_2%3a1.1.4-3build1_arm64.deb ... 584s Unpacking libxinerama1:arm64 (2:1.1.4-3build1) ... 584s Selecting previously unselected package libxrandr2:arm64. 584s Preparing to unpack .../062-libxrandr2_2%3a1.5.4-1_arm64.deb ... 584s Unpacking libxrandr2:arm64 (2:1.5.4-1) ... 584s Selecting previously unselected package libgtk-3-common. 584s Preparing to unpack .../063-libgtk-3-common_3.24.43-3ubuntu2_all.deb ... 584s Unpacking libgtk-3-common (3.24.43-3ubuntu2) ... 584s Selecting previously unselected package libgtk-3-0t64:arm64. 584s Preparing to unpack .../064-libgtk-3-0t64_3.24.43-3ubuntu2_arm64.deb ... 584s Unpacking libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 585s Selecting previously unselected package libglvnd0:arm64. 585s Preparing to unpack .../065-libglvnd0_1.7.0-1build1_arm64.deb ... 585s Unpacking libglvnd0:arm64 (1.7.0-1build1) ... 585s Selecting previously unselected package libglapi-mesa:arm64. 585s Preparing to unpack .../066-libglapi-mesa_24.2.3-1ubuntu1_arm64.deb ... 585s Unpacking libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 585s Selecting previously unselected package libx11-xcb1:arm64. 585s Preparing to unpack .../067-libx11-xcb1_2%3a1.8.7-1build1_arm64.deb ... 585s Unpacking libx11-xcb1:arm64 (2:1.8.7-1build1) ... 585s Selecting previously unselected package libxcb-dri2-0:arm64. 585s Preparing to unpack .../068-libxcb-dri2-0_1.17.0-2_arm64.deb ... 585s Unpacking libxcb-dri2-0:arm64 (1.17.0-2) ... 585s Selecting previously unselected package libxcb-dri3-0:arm64. 585s Preparing to unpack .../069-libxcb-dri3-0_1.17.0-2_arm64.deb ... 585s Unpacking libxcb-dri3-0:arm64 (1.17.0-2) ... 585s Selecting previously unselected package libxcb-glx0:arm64. 585s Preparing to unpack .../070-libxcb-glx0_1.17.0-2_arm64.deb ... 585s Unpacking libxcb-glx0:arm64 (1.17.0-2) ... 585s Selecting previously unselected package libxcb-present0:arm64. 585s Preparing to unpack .../071-libxcb-present0_1.17.0-2_arm64.deb ... 585s Unpacking libxcb-present0:arm64 (1.17.0-2) ... 585s Selecting previously unselected package libxcb-randr0:arm64. 585s Preparing to unpack .../072-libxcb-randr0_1.17.0-2_arm64.deb ... 585s Unpacking libxcb-randr0:arm64 (1.17.0-2) ... 585s Selecting previously unselected package libxcb-sync1:arm64. 585s Preparing to unpack .../073-libxcb-sync1_1.17.0-2_arm64.deb ... 585s Unpacking libxcb-sync1:arm64 (1.17.0-2) ... 585s Selecting previously unselected package libxcb-xfixes0:arm64. 585s Preparing to unpack .../074-libxcb-xfixes0_1.17.0-2_arm64.deb ... 585s Unpacking libxcb-xfixes0:arm64 (1.17.0-2) ... 585s Selecting previously unselected package libxshmfence1:arm64. 585s Preparing to unpack .../075-libxshmfence1_1.3-1build5_arm64.deb ... 585s Unpacking libxshmfence1:arm64 (1.3-1build5) ... 585s Selecting previously unselected package libxxf86vm1:arm64. 585s Preparing to unpack .../076-libxxf86vm1_1%3a1.1.4-1build4_arm64.deb ... 585s Unpacking libxxf86vm1:arm64 (1:1.1.4-1build4) ... 585s Selecting previously unselected package libdrm-amdgpu1:arm64. 585s Preparing to unpack .../077-libdrm-amdgpu1_2.4.122-1_arm64.deb ... 585s Unpacking libdrm-amdgpu1:arm64 (2.4.122-1) ... 585s Selecting previously unselected package libdrm-radeon1:arm64. 585s Preparing to unpack .../078-libdrm-radeon1_2.4.122-1_arm64.deb ... 585s Unpacking libdrm-radeon1:arm64 (2.4.122-1) ... 585s Selecting previously unselected package mesa-libgallium:arm64. 585s Preparing to unpack .../079-mesa-libgallium_24.2.3-1ubuntu1_arm64.deb ... 585s Unpacking mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 585s Selecting previously unselected package libvulkan1:arm64. 585s Preparing to unpack .../080-libvulkan1_1.3.290.0-1_arm64.deb ... 585s Unpacking libvulkan1:arm64 (1.3.290.0-1) ... 585s Selecting previously unselected package libwayland-server0:arm64. 585s Preparing to unpack .../081-libwayland-server0_1.23.0-1_arm64.deb ... 585s Unpacking libwayland-server0:arm64 (1.23.0-1) ... 585s Selecting previously unselected package libgbm1:arm64. 586s Preparing to unpack .../082-libgbm1_24.2.3-1ubuntu1_arm64.deb ... 586s Unpacking libgbm1:arm64 (24.2.3-1ubuntu1) ... 586s Selecting previously unselected package libgl1-mesa-dri:arm64. 586s Preparing to unpack .../083-libgl1-mesa-dri_24.2.3-1ubuntu1_arm64.deb ... 586s Unpacking libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 586s Selecting previously unselected package libglx-mesa0:arm64. 586s Preparing to unpack .../084-libglx-mesa0_24.2.3-1ubuntu1_arm64.deb ... 586s Unpacking libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 586s Selecting previously unselected package libglx0:arm64. 586s Preparing to unpack .../085-libglx0_1.7.0-1build1_arm64.deb ... 586s Unpacking libglx0:arm64 (1.7.0-1build1) ... 586s Selecting previously unselected package libgl1:arm64. 586s Preparing to unpack .../086-libgl1_1.7.0-1build1_arm64.deb ... 586s Unpacking libgl1:arm64 (1.7.0-1build1) ... 586s Selecting previously unselected package libasound2-data. 586s Preparing to unpack .../087-libasound2-data_1.2.12-1_all.deb ... 586s Unpacking libasound2-data (1.2.12-1) ... 586s Selecting previously unselected package libasound2t64:arm64. 586s Preparing to unpack .../088-libasound2t64_1.2.12-1_arm64.deb ... 586s Unpacking libasound2t64:arm64 (1.2.12-1) ... 586s Selecting previously unselected package libgif7:arm64. 586s Preparing to unpack .../089-libgif7_5.2.2-1ubuntu1_arm64.deb ... 586s Unpacking libgif7:arm64 (5.2.2-1ubuntu1) ... 586s Selecting previously unselected package x11-common. 586s Preparing to unpack .../090-x11-common_1%3a7.7+23ubuntu3_all.deb ... 586s Unpacking x11-common (1:7.7+23ubuntu3) ... 586s Selecting previously unselected package libxtst6:arm64. 586s Preparing to unpack .../091-libxtst6_2%3a1.2.3-1.1build1_arm64.deb ... 586s Unpacking libxtst6:arm64 (2:1.2.3-1.1build1) ... 586s Selecting previously unselected package openjdk-21-jre:arm64. 586s Preparing to unpack .../092-openjdk-21-jre_21.0.5+11-1_arm64.deb ... 586s Unpacking openjdk-21-jre:arm64 (21.0.5+11-1) ... 586s Selecting previously unselected package default-jre. 586s Preparing to unpack .../093-default-jre_2%3a1.21-76_arm64.deb ... 586s Unpacking default-jre (2:1.21-76) ... 586s Selecting previously unselected package libcommons-math3-java. 586s Preparing to unpack .../094-libcommons-math3-java_3.6.1-3_all.deb ... 586s Unpacking libcommons-math3-java (3.6.1-3) ... 586s Selecting previously unselected package libjbzip2-java. 586s Preparing to unpack .../095-libjbzip2-java_0.9.1-8_all.deb ... 586s Unpacking libjbzip2-java (0.9.1-8) ... 586s Selecting previously unselected package libapache-pom-java. 586s Preparing to unpack .../096-libapache-pom-java_33-2_all.deb ... 586s Unpacking libapache-pom-java (33-2) ... 586s Selecting previously unselected package libcommons-parent-java. 586s Preparing to unpack .../097-libcommons-parent-java_56-1_all.deb ... 586s Unpacking libcommons-parent-java (56-1) ... 586s Selecting previously unselected package libcommons-compress-java. 586s Preparing to unpack .../098-libcommons-compress-java_1.25.0-1_all.deb ... 586s Unpacking libcommons-compress-java (1.25.0-1) ... 586s Selecting previously unselected package libcommons-logging-java. 586s Preparing to unpack .../099-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ... 586s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ... 586s Selecting previously unselected package libcommons-jexl2-java. 586s Preparing to unpack .../100-libcommons-jexl2-java_2.1.1-6_all.deb ... 586s Unpacking libcommons-jexl2-java (2.1.1-6) ... 586s Selecting previously unselected package libmjson-java. 586s Preparing to unpack .../101-libmjson-java_1.4.0-3_all.deb ... 586s Unpacking libmjson-java (1.4.0-3) ... 586s Selecting previously unselected package libmbedcrypto7t64:arm64. 586s Preparing to unpack .../102-libmbedcrypto7t64_2.28.8-1_arm64.deb ... 586s Unpacking libmbedcrypto7t64:arm64 (2.28.8-1) ... 586s Selecting previously unselected package libmbedx509-1t64:arm64. 587s Preparing to unpack .../103-libmbedx509-1t64_2.28.8-1_arm64.deb ... 587s Unpacking libmbedx509-1t64:arm64 (2.28.8-1) ... 587s Selecting previously unselected package libmbedtls14t64:arm64. 587s Preparing to unpack .../104-libmbedtls14t64_2.28.8-1_arm64.deb ... 587s Unpacking libmbedtls14t64:arm64 (2.28.8-1) ... 587s Selecting previously unselected package ncbi-vdb-data. 587s Preparing to unpack .../105-ncbi-vdb-data_3.0.2+dfsg-2build2_all.deb ... 587s Unpacking ncbi-vdb-data (3.0.2+dfsg-2build2) ... 587s Selecting previously unselected package libncbi-vdb3:arm64. 587s Preparing to unpack .../106-libncbi-vdb3_3.0.2+dfsg-2build2_arm64.deb ... 587s Unpacking libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 587s Selecting previously unselected package libncbi-ngs3:arm64. 587s Preparing to unpack .../107-libncbi-ngs3_3.0.3+dfsg-9ubuntu1_arm64.deb ... 587s Unpacking libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 587s Selecting previously unselected package libngs-jni:arm64. 587s Preparing to unpack .../108-libngs-jni_3.0.3+dfsg-9ubuntu1_arm64.deb ... 587s Unpacking libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 587s Selecting previously unselected package libngs-java:arm64. 587s Preparing to unpack .../109-libngs-java_3.0.3+dfsg-9ubuntu1_arm64.deb ... 587s Unpacking libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 587s Selecting previously unselected package librhino-java. 587s Preparing to unpack .../110-librhino-java_1.7.15-1_all.deb ... 587s Unpacking librhino-java (1.7.15-1) ... 587s Selecting previously unselected package libsnappy1v5:arm64. 587s Preparing to unpack .../111-libsnappy1v5_1.2.1-1_arm64.deb ... 587s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 587s Selecting previously unselected package libsnappy-jni. 587s Preparing to unpack .../112-libsnappy-jni_1.1.10.5-2_arm64.deb ... 587s Unpacking libsnappy-jni (1.1.10.5-2) ... 587s Selecting previously unselected package libsnappy-java. 587s Preparing to unpack .../113-libsnappy-java_1.1.10.5-2_all.deb ... 587s Unpacking libsnappy-java (1.1.10.5-2) ... 587s Selecting previously unselected package libhtsjdk-java. 587s Preparing to unpack .../114-libhtsjdk-java_4.1.0+dfsg-2_all.deb ... 587s Unpacking libhtsjdk-java (4.1.0+dfsg-2) ... 587s Selecting previously unselected package libfindbin-libs-perl. 587s Preparing to unpack .../115-libfindbin-libs-perl_3.0.2-1_all.deb ... 587s Unpacking libfindbin-libs-perl (3.0.2-1) ... 587s Selecting previously unselected package fastqc. 587s Preparing to unpack .../116-fastqc_0.12.1+dfsg-4_all.deb ... 587s Unpacking fastqc (0.12.1+dfsg-4) ... 587s Selecting previously unselected package unzip. 587s Preparing to unpack .../117-unzip_6.0-28ubuntu6_arm64.deb ... 587s Unpacking unzip (6.0-28ubuntu6) ... 587s Selecting previously unselected package autopkgtest-satdep. 587s Preparing to unpack .../118-4-autopkgtest-satdep.deb ... 587s Unpacking autopkgtest-satdep (0) ... 587s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 587s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ... 587s Setting up liblcms2-2:arm64 (2.14-2build1) ... 587s Setting up libpixman-1-0:arm64 (0.42.2-1build1) ... 587s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 587s Setting up libwayland-server0:arm64 (1.23.0-1) ... 587s Setting up libx11-xcb1:arm64 (2:1.8.7-1build1) ... 587s Setting up libxdamage1:arm64 (1:1.1.6-1build1) ... 587s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ... 587s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 587s Setting up hicolor-icon-theme (0.18-1) ... 587s Setting up libxi6:arm64 (2:1.8.2-1) ... 587s Setting up libmbedcrypto7t64:arm64 (2.28.8-1) ... 587s Setting up java-common (0.76) ... 587s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 587s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 587s Setting up libxcb-render0:arm64 (1.17.0-2) ... 587s Setting up libdrm-radeon1:arm64 (2.4.122-1) ... 587s Setting up libglvnd0:arm64 (1.7.0-1build1) ... 587s Setting up libmjson-java (1.4.0-3) ... 587s Setting up libxcb-glx0:arm64 (1.17.0-2) ... 587s Setting up unzip (6.0-28ubuntu6) ... 587s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 587s Setting up x11-common (1:7.7+23ubuntu3) ... 588s Setting up libdeflate0:arm64 (1.21-1) ... 588s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 588s Setting up libfindbin-libs-perl (3.0.2-1) ... 588s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 588s Setting up libcolord2:arm64 (1.4.7-1build2) ... 588s Setting up libxxf86vm1:arm64 (1:1.1.4-1build4) ... 588s Setting up libsnappy1v5:arm64 (1.2.1-1) ... 588s Setting up libxcb-present0:arm64 (1.17.0-2) ... 588s Setting up libdconf1:arm64 (0.40.0-4build2) ... 588s Setting up libasound2-data (1.2.12-1) ... 588s Setting up librhino-java (1.7.15-1) ... 588s Setting up libasound2t64:arm64 (1.2.12-1) ... 588s Setting up libepoxy0:arm64 (1.5.10-1build1) ... 588s Setting up libxfixes3:arm64 (1:6.0.0-2build1) ... 588s Setting up libxcb-sync1:arm64 (1.17.0-2) ... 588s Setting up libapache-pom-java (33-2) ... 588s Setting up libavahi-common-data:arm64 (0.8-13ubuntu6) ... 588s Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... 588s Setting up libxinerama1:arm64 (2:1.1.4-3build1) ... 588s Setting up fonts-dejavu-mono (2.37-8) ... 588s Setting up libxrandr2:arm64 (2:1.5.4-1) ... 588s Setting up fonts-dejavu-core (2.37-8) ... 588s Setting up libjbzip2-java (0.9.1-8) ... 588s Setting up libpcsclite1:arm64 (2.3.0-1) ... 588s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 588s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 588s Setting up libvulkan1:arm64 (1.3.290.0-1) ... 588s Setting up libwebp7:arm64 (1.4.0-0.1) ... 588s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ... 588s Setting up libgif7:arm64 (5.2.2-1ubuntu1) ... 588s Setting up libxshmfence1:arm64 (1.3-1build5) ... 588s Setting up at-spi2-common (2.54.0-1) ... 588s Setting up libxcb-randr0:arm64 (1.17.0-2) ... 588s Setting up libharfbuzz0b:arm64 (9.0.0-1) ... 588s Setting up ncbi-vdb-data (3.0.2+dfsg-2build2) ... 588s Setting up libthai-data (0.1.29-2build1) ... 588s Setting up libcommons-math3-java (3.6.1-3) ... 588s Setting up libwayland-egl1:arm64 (1.23.0-1) ... 588s Setting up ca-certificates-java (20240118) ... 588s No JRE found. Skipping Java certificates setup. 588s Setting up libsnappy-jni (1.1.10.5-2) ... 588s Setting up libxcomposite1:arm64 (1:0.4.5-1build3) ... 588s Setting up libdrm-amdgpu1:arm64 (2.4.122-1) ... 588s Setting up libwayland-client0:arm64 (1.23.0-1) ... 588s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 588s Setting up mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 588s Setting up libmbedx509-1t64:arm64 (2.28.8-1) ... 588s Setting up libatk1.0-0t64:arm64 (2.54.0-1) ... 588s Setting up openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 588s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode 588s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 588s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 588s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 588s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 588s Setting up libgbm1:arm64 (24.2.3-1ubuntu1) ... 588s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 588s Setting up libxtst6:arm64 (2:1.2.3-1.1build1) ... 588s Setting up libxcursor1:arm64 (1:1.2.2-1) ... 588s Setting up libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 588s Setting up libcommons-parent-java (56-1) ... 588s Setting up libavahi-common3:arm64 (0.8-13ubuntu6) ... 588s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 588s Setting up dconf-service (0.40.0-4build2) ... 588s Setting up libcommons-jexl2-java (2.1.1-6) ... 588s Setting up libthai0:arm64 (0.1.29-2build1) ... 588s Setting up libmbedtls14t64:arm64 (2.28.8-1) ... 588s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 588s Setting up libwayland-cursor0:arm64 (1.23.0-1) ... 588s Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 588s Setting up libsnappy-java (1.1.10.5-2) ... 588s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 588s Setting up libavahi-client3:arm64 (0.8-13ubuntu6) ... 588s Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 588s Setting up gtk-update-icon-cache (4.16.2+ds-2) ... 588s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 590s Regenerating fonts cache... done. 590s Setting up libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 590s Setting up libglx0:arm64 (1.7.0-1build1) ... 590s Setting up dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 590s Setting up libcommons-compress-java (1.25.0-1) ... 590s Setting up libpango-1.0-0:arm64 (1.54.0+ds-2) ... 590s Setting up libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 590s Setting up libcairo2:arm64 (1.18.2-2) ... 590s Setting up libgl1:arm64 (1.7.0-1build1) ... 590s Setting up libcairo-gobject2:arm64 (1.18.2-2) ... 590s Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 590s Setting up libcups2t64:arm64 (2.4.10-1ubuntu2) ... 590s Setting up libgtk-3-common (3.24.43-3ubuntu2) ... 590s Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 590s Setting up libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 590s Setting up libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 590s Setting up libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 590s Setting up libhtsjdk-java (4.1.0+dfsg-2) ... 590s Setting up adwaita-icon-theme (47.0-1) ... 590s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 590s Setting up humanity-icon-theme (0.6.16) ... 590s Setting up ubuntu-mono (24.04-0ubuntu1) ... 590s Processing triggers for man-db (2.12.1-3) ... 591s Processing triggers for libglib2.0-0t64:arm64 (2.82.1-0ubuntu1) ... 591s Setting up libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 591s Processing triggers for libc-bin (2.40-1ubuntu3) ... 591s Processing triggers for ca-certificates-java (20240118) ... 592s Adding debian:ACCVRAIZ1.pem 592s Adding debian:AC_RAIZ_FNMT-RCM.pem 592s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 592s Adding debian:ANF_Secure_Server_Root_CA.pem 592s Adding debian:Actalis_Authentication_Root_CA.pem 592s Adding debian:AffirmTrust_Commercial.pem 592s Adding debian:AffirmTrust_Networking.pem 592s Adding debian:AffirmTrust_Premium.pem 592s Adding debian:AffirmTrust_Premium_ECC.pem 592s Adding debian:Amazon_Root_CA_1.pem 592s Adding debian:Amazon_Root_CA_2.pem 592s Adding debian:Amazon_Root_CA_3.pem 592s Adding debian:Amazon_Root_CA_4.pem 592s Adding debian:Atos_TrustedRoot_2011.pem 592s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 592s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 592s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 592s Adding debian:BJCA_Global_Root_CA1.pem 592s Adding debian:BJCA_Global_Root_CA2.pem 592s Adding debian:Baltimore_CyberTrust_Root.pem 592s Adding debian:Buypass_Class_2_Root_CA.pem 592s Adding debian:Buypass_Class_3_Root_CA.pem 592s Adding debian:CA_Disig_Root_R2.pem 592s Adding debian:CFCA_EV_ROOT.pem 592s Adding debian:COMODO_Certification_Authority.pem 592s Adding debian:COMODO_ECC_Certification_Authority.pem 592s Adding debian:COMODO_RSA_Certification_Authority.pem 592s Adding debian:Certainly_Root_E1.pem 592s Adding debian:Certainly_Root_R1.pem 592s Adding debian:Certigna.pem 592s Adding debian:Certigna_Root_CA.pem 592s Adding debian:Certum_EC-384_CA.pem 592s Adding debian:Certum_Trusted_Network_CA.pem 592s Adding debian:Certum_Trusted_Network_CA_2.pem 592s Adding debian:Certum_Trusted_Root_CA.pem 592s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 592s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 592s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 592s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 592s Adding debian:Comodo_AAA_Services_root.pem 592s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 592s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 592s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 592s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 592s Adding debian:DigiCert_Assured_ID_Root_CA.pem 592s Adding debian:DigiCert_Assured_ID_Root_G2.pem 592s Adding debian:DigiCert_Assured_ID_Root_G3.pem 592s Adding debian:DigiCert_Global_Root_CA.pem 592s Adding debian:DigiCert_Global_Root_G2.pem 592s Adding debian:DigiCert_Global_Root_G3.pem 592s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 592s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 592s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 592s Adding debian:DigiCert_Trusted_Root_G4.pem 592s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 592s Adding debian:Entrust_Root_Certification_Authority.pem 592s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 592s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 592s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 592s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 592s Adding debian:GLOBALTRUST_2020.pem 592s Adding debian:GTS_Root_R1.pem 592s Adding debian:GTS_Root_R2.pem 592s Adding debian:GTS_Root_R3.pem 592s Adding debian:GTS_Root_R4.pem 592s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 592s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 592s Adding debian:GlobalSign_Root_CA.pem 592s Adding debian:GlobalSign_Root_CA_-_R3.pem 592s Adding debian:GlobalSign_Root_CA_-_R6.pem 592s Adding debian:GlobalSign_Root_E46.pem 592s Adding debian:GlobalSign_Root_R46.pem 592s Adding debian:Go_Daddy_Class_2_CA.pem 592s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 592s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 592s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 592s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 592s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 592s Adding debian:HiPKI_Root_CA_-_G1.pem 592s Adding debian:Hongkong_Post_Root_CA_3.pem 592s Adding debian:ISRG_Root_X1.pem 592s Adding debian:ISRG_Root_X2.pem 592s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 592s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 592s Adding debian:Izenpe.com.pem 592s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 592s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 592s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 592s Adding debian:NAVER_Global_Root_Certification_Authority.pem 592s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 592s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 592s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 592s Adding debian:QuoVadis_Root_CA_1_G3.pem 592s Adding debian:QuoVadis_Root_CA_2.pem 592s Adding debian:QuoVadis_Root_CA_2_G3.pem 592s Adding debian:QuoVadis_Root_CA_3.pem 592s Adding debian:QuoVadis_Root_CA_3_G3.pem 592s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 592s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 592s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 592s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 592s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 592s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 592s Adding debian:SZAFIR_ROOT_CA2.pem 592s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 592s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 592s Adding debian:SecureSign_RootCA11.pem 592s Adding debian:SecureTrust_CA.pem 592s Adding debian:Secure_Global_CA.pem 592s Adding debian:Security_Communication_ECC_RootCA1.pem 592s Adding debian:Security_Communication_RootCA2.pem 592s Adding debian:Security_Communication_RootCA3.pem 592s Adding debian:Security_Communication_Root_CA.pem 592s Adding debian:Starfield_Class_2_CA.pem 592s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 592s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 592s Adding debian:SwissSign_Gold_CA_-_G2.pem 592s Adding debian:SwissSign_Silver_CA_-_G2.pem 592s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 592s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 592s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 592s Adding debian:TWCA_Global_Root_CA.pem 592s Adding debian:TWCA_Root_Certification_Authority.pem 592s Adding debian:TeliaSonera_Root_CA_v1.pem 592s Adding debian:Telia_Root_CA_v2.pem 592s Adding debian:TrustAsia_Global_Root_CA_G3.pem 592s Adding debian:TrustAsia_Global_Root_CA_G4.pem 592s Adding debian:Trustwave_Global_Certification_Authority.pem 592s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 592s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 592s Adding debian:TunTrust_Root_CA.pem 592s Adding debian:UCA_Extended_Validation_Root.pem 592s Adding debian:UCA_Global_G2_Root.pem 592s Adding debian:USERTrust_ECC_Certification_Authority.pem 592s Adding debian:USERTrust_RSA_Certification_Authority.pem 592s Adding debian:XRamp_Global_CA_Root.pem 592s Adding debian:certSIGN_ROOT_CA.pem 592s Adding debian:certSIGN_Root_CA_G2.pem 592s Adding debian:e-Szigno_Root_CA_2017.pem 592s Adding debian:ePKI_Root_Certification_Authority.pem 592s Adding debian:emSign_ECC_Root_CA_-_C3.pem 592s Adding debian:emSign_ECC_Root_CA_-_G3.pem 592s Adding debian:emSign_Root_CA_-_C1.pem 592s Adding debian:emSign_Root_CA_-_G1.pem 592s Adding debian:vTrus_ECC_Root_CA.pem 592s Adding debian:vTrus_Root_CA.pem 592s done. 592s Setting up openjdk-21-jre:arm64 (21.0.5+11-1) ... 592s Setting up default-jre-headless (2:1.21-76) ... 592s Setting up default-jre (2:1.21-76) ... 592s Setting up fastqc (0.12.1+dfsg-4) ... 592s Setting up autopkgtest-satdep (0) ... 598s (Reading database ... 94252 files and directories currently installed.) 598s Removing autopkgtest-satdep (0) ... 606s autopkgtest [19:13:47]: test fastqc-run-unit-test: [----------------------- 607s null 607s Started analysis of example.fastq 607s Analysis complete for example.fastq 609s Summary results match for: fastqc example.fastq 609s 609s Started analysis of toy_sam.sam 609s Analysis complete for toy_sam.sam 611s Summary results match for: fastqc toy_sam.sam 611s 611s Started analysis of toy_bam.bam 611s Analysis complete for toy_bam.bam 613s Summary results match for: fastqc toy_bam.bam 613s 613s PASS 614s autopkgtest [19:13:55]: test fastqc-run-unit-test: -----------------------] 614s fastqc-run-unit-test PASS 614s autopkgtest [19:13:55]: test fastqc-run-unit-test: - - - - - - - - - - results - - - - - - - - - - 614s autopkgtest [19:13:55]: test jalview-run-unit-test: preparing testbed 694s autopkgtest [19:15:15]: testbed dpkg architecture: arm64 694s autopkgtest [19:15:15]: testbed apt version: 2.9.8 694s autopkgtest [19:15:15]: @@@@@@@@@@@@@@@@@@@@ test bed setup 695s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 696s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2775 kB] 696s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 698s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [44.0 kB] 698s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [183 kB] 698s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [241 kB] 698s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 698s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [2023 kB] 698s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [36.5 kB] 698s Fetched 5433 kB in 2s (2870 kB/s) 698s Reading package lists... 701s Reading package lists... 701s Building dependency tree... 701s Reading state information... 702s Calculating upgrade... 703s The following packages will be upgraded: 703s libevdev2 libftdi1-2 libinih1 nano python3-lazr.uri 703s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 703s Need to get 374 kB of archives. 703s After this operation, 17.4 kB of additional disk space will be used. 703s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libevdev2 arm64 1.13.3+dfsg-1 [36.0 kB] 703s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 nano arm64 8.2-1 [289 kB] 703s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libftdi1-2 arm64 1.5-7 [28.4 kB] 703s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libinih1 arm64 58-1ubuntu1 [7412 B] 703s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lazr.uri all 1.0.6-4 [13.6 kB] 704s Fetched 374 kB in 1s (743 kB/s) 704s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 704s Preparing to unpack .../libevdev2_1.13.3+dfsg-1_arm64.deb ... 704s Unpacking libevdev2:arm64 (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 705s Preparing to unpack .../archives/nano_8.2-1_arm64.deb ... 705s Unpacking nano (8.2-1) over (8.1-1) ... 705s Preparing to unpack .../libftdi1-2_1.5-7_arm64.deb ... 705s Unpacking libftdi1-2:arm64 (1.5-7) over (1.5-6build5) ... 705s Preparing to unpack .../libinih1_58-1ubuntu1_arm64.deb ... 705s Unpacking libinih1:arm64 (58-1ubuntu1) over (55-1ubuntu2) ... 705s Preparing to unpack .../python3-lazr.uri_1.0.6-4_all.deb ... 705s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 705s Setting up libinih1:arm64 (58-1ubuntu1) ... 705s Setting up python3-lazr.uri (1.0.6-4) ... 705s Setting up libftdi1-2:arm64 (1.5-7) ... 705s Setting up nano (8.2-1) ... 705s Setting up libevdev2:arm64 (1.13.3+dfsg-1) ... 705s Processing triggers for man-db (2.12.1-3) ... 706s Processing triggers for install-info (7.1.1-1) ... 706s Processing triggers for libc-bin (2.40-1ubuntu3) ... 707s Reading package lists... 707s Building dependency tree... 707s Reading state information... 708s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 709s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 709s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 709s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 709s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 711s Reading package lists... 711s Reading package lists... 711s Building dependency tree... 711s Reading state information... 712s Calculating upgrade... 713s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 713s Reading package lists... 713s Building dependency tree... 713s Reading state information... 715s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 719s Reading package lists... 719s Building dependency tree... 719s Reading state information... 720s Starting pkgProblemResolver with broken count: 0 720s Starting 2 pkgProblemResolver with broken count: 0 720s Done 721s The following additional packages will be installed: 721s adwaita-icon-theme ant ant-optional antlr at-spi2-common 721s ca-certificates-java dconf-gsettings-backend dconf-service default-jre 721s default-jre-headless fontconfig fontconfig-config fonts-dejavu-core 721s fonts-dejavu-mono groovy gtk-update-icon-cache hicolor-icon-theme 721s humanity-icon-theme ivy jalview java-common javahelp2 junit4 721s libactivation-java libandroid-json-org-java libantlr-java 721s libantlr4-runtime-java libaopalliance-java libapache-mime4j-java 721s libapache-pom-java libapfloat-java libargs4j-java libasm-java 721s libasound2-data libasound2t64 libatinject-jsr330-api-java 721s libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 721s libavahi-common-data libavahi-common3 libaxis-java libbiojava6-java 721s libbsf-java libcairo-gobject2 libcairo2 libcastor-core-java 721s libcastor-xml-java libcdi-api-java libciftools-java libcodemodel-java 721s libcolord2 libcommons-cli-java libcommons-codec-java 721s libcommons-compress-java libcommons-discovery-java libcommons-exec-java 721s libcommons-httpclient-java libcommons-io-java libcommons-jexl2-java 721s libcommons-lang-java libcommons-lang3-java libcommons-logging-java 721s libcommons-math-java libcommons-parent-java libcommons-text-java libcups2t64 721s libdatrie1 libdconf1 libdeflate0 libdom4j-java libdrm-amdgpu1 libdrm-radeon1 721s libdtd-parser-java libel-api-java libepoxy0 liberror-prone-java 721s libexec-maven-plugin-java libfastinfoset-java libfastutil-java 721s libfontconfig1 libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common 721s libgeronimo-annotation-1.3-spec-java libgeronimo-interceptor-3.0-spec-java 721s libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 721s libgmbal-commons-java libgmbal-java libgmbal-pfl-java libgoogle-gson-java 721s libgraphite2-3 libgtk-3-0t64 libgtk-3-common libguava-java libguice-java 721s libhamcrest-java libharfbuzz0b libhawtjni-runtime-java libhtsjdk-java 721s libhttpclient-java libhttpcore-java libhttpmime-java libinchi1 721s libintervalstorej-java libisorelax-java libistack-commons-java 721s libitext5-java libjaba-client-java libjackson2-annotations-java 721s libjackson2-core-java libjackson2-databind-java libjansi-java 721s libjansi-native-java libjansi1-java libjaxb-api-java libjaxb-java 721s libjaxen-java libjaxrs-api-java libjaxws-api-java libjaxws-java libjbig0 721s libjersey1-client-java libjersey1-core-java libjetty9-java libjfreesvg-java 721s libjgrapht-java libjgraphx-java libjheaps-java libjline2-java libjmol-java 721s libjni-inchi-java libjni-inchi-jni libjpeg-turbo8 libjpeg8 721s libjson-simple-java libjsoup-java libjsp-api-java libjsr305-java 721s libjsr311-api-java libjswingreader-java libjws-api-java 721s libknopflerfish-osgi-framework-java liblcms2-2 liblerc4 liblightcouch-java 721s liblog4j1.2-java liblog4j2-java libmail-java libmaven-archiver-java 721s libmaven-compiler-plugin-java libmaven-file-management-java 721s libmaven-jar-plugin-java libmaven-parent-java libmaven-resolver-java 721s libmaven-shared-incremental-java libmaven-shared-io-java 721s libmaven-shared-utils-java libmaven3-core-java libmbedcrypto7t64 721s libmbedtls14t64 libmbedx509-1t64 libmetro-policy-java libmiglayout-java 721s libmimepull-java libmjson-java libmmtf-java libmongodb-java libmsgpack-java 721s libmsv-java libnaga-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni 721s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 721s libpixman-1-0 libplexus-archiver-java libplexus-cipher-java 721s libplexus-classworlds-java libplexus-compiler-java 721s libplexus-component-annotations-java libplexus-container-default-java 721s libplexus-interpolation-java libplexus-io-java libplexus-languages-java 721s libplexus-sec-dispatcher-java libplexus-utils2-java libqdox-java 721s libqdox2-java librelaxng-datatype-java librhino-java librngom-java 721s libsaaj-java libsaaj-ri-java libservlet-api-java libsharpyuv0 721s libsisu-inject-java libsisu-plexus-java libslf4j-java libsnappy-java 721s libsnappy-jni libsnappy1v5 libstax-ex-java libstax2-api-java 721s libstreambuffer-java libthai-data libthai0 libtiff6 libtxw2-java 721s libvamsas-client-java libvecmath-java libvulkan1 libwagon-http-java 721s libwagon-provider-api-java libwayland-client0 libwayland-cursor0 721s libwayland-egl1 libwayland-server0 libwebp7 libwebsocket-api-java 721s libwoodstox-java libwsdl4j-java libx11-xcb1 libxbean-reflect-java 721s libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 721s libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 721s libxcursor1 libxdamage1 libxerces2-java libxfixes3 libxi6 libxinerama1 721s libxml-commons-external-java libxml-commons-resolver1.1-java libxpp3-java 721s libxrandr2 libxrender1 libxshmfence1 libxsom-java libxstream-java libxtst6 721s libxxf86vm1 libxz-java mesa-libgallium ncbi-vdb-data openjdk-21-jre 721s openjdk-21-jre-headless ubuntu-mono varna x11-common 721s Suggested packages: 721s ant-doc default-jdk | java-compiler | java-sdk javacc junit jython 721s libbcel-java libcommons-net-java libjaxp1.3-java libjdepend-java 721s libjsch-java liboro-java libregexp-java libxalan2-java groovy-doc ivy-doc 721s libbcpg-java libbcprov-java libjsch-agent-proxy-java clustalw kalign 721s t-coffee javahelp2-doc libandroid-json-org-java-doc alsa-utils 721s libasound2-plugins libatinject-jsr330-api-java-doc libaxis-java-doc 721s libbiojava6-java-doc bsh rhino libcastor-java-doc colord 721s libcommons-httpclient-java-doc libcommons-lang-java-doc 721s libavalon-framework-java libexcalibur-logkit-java cups-common libxpp2-java 721s libgoogle-gson-java-doc gvfs libcglib-java picard-tools libbcpkix-java 721s libxml-security-java libjackson2-annotations-java-doc libjdom1-java 721s libxom-java jetty9 libjfreesvg-java-doc libjmol-java-doc libjson-simple-doc 721s libjsoup-java-doc libjsr305-java-doc liblcms2-utils liblog4j1.2-java-doc 721s libcommons-csv-java libconversant-disruptor-java libdisruptor-java 721s libgeronimo-jms-1.1-spec-java libjackson2-dataformat-xml-java 721s libjackson2-dataformat-yaml libjctools-java libjeromq-java libmail-java-doc 721s libmaven-file-management-java-doc libmaven-shared-utils-java-doc 721s liblogback-java libswt-gtk-4-java libmmtf-java-doc libngs-java-doc pcscd 721s libeclipse-jdt-core-java libplexus-utils2-java-doc testng 721s libxerces2-java-doc libxml-commons-resolver1.1-java-doc libcglib-nodep-java 721s libjdom2-java libjettison-java libjoda-time-java libkxml2-java libnss-mdns 721s fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho 721s fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic 721s Recommended packages: 721s librsvg2-common libgpars-groovy-java libjcommander-java alsa-ucm-conf 721s alsa-topology-conf at-spi2-core liboro-java libregexp-java 721s libgdk-pixbuf2.0-bin libgl1-amber-dri libgtk-3-bin mesa-vulkan-drivers 721s | vulkan-icd libatk-wrapper-java-jni fonts-dejavu-extra 721s The following NEW packages will be installed: 721s adwaita-icon-theme ant ant-optional antlr at-spi2-common autopkgtest-satdep 721s ca-certificates-java dconf-gsettings-backend dconf-service default-jre 721s default-jre-headless fontconfig fontconfig-config fonts-dejavu-core 721s fonts-dejavu-mono groovy gtk-update-icon-cache hicolor-icon-theme 721s humanity-icon-theme ivy jalview java-common javahelp2 junit4 721s libactivation-java libandroid-json-org-java libantlr-java 721s libantlr4-runtime-java libaopalliance-java libapache-mime4j-java 721s libapache-pom-java libapfloat-java libargs4j-java libasm-java 721s libasound2-data libasound2t64 libatinject-jsr330-api-java 721s libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 721s libavahi-common-data libavahi-common3 libaxis-java libbiojava6-java 721s libbsf-java libcairo-gobject2 libcairo2 libcastor-core-java 721s libcastor-xml-java libcdi-api-java libciftools-java libcodemodel-java 721s libcolord2 libcommons-cli-java libcommons-codec-java 721s libcommons-compress-java libcommons-discovery-java libcommons-exec-java 721s libcommons-httpclient-java libcommons-io-java libcommons-jexl2-java 721s libcommons-lang-java libcommons-lang3-java libcommons-logging-java 721s libcommons-math-java libcommons-parent-java libcommons-text-java libcups2t64 721s libdatrie1 libdconf1 libdeflate0 libdom4j-java libdrm-amdgpu1 libdrm-radeon1 721s libdtd-parser-java libel-api-java libepoxy0 liberror-prone-java 721s libexec-maven-plugin-java libfastinfoset-java libfastutil-java 721s libfontconfig1 libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common 721s libgeronimo-annotation-1.3-spec-java libgeronimo-interceptor-3.0-spec-java 721s libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 721s libgmbal-commons-java libgmbal-java libgmbal-pfl-java libgoogle-gson-java 721s libgraphite2-3 libgtk-3-0t64 libgtk-3-common libguava-java libguice-java 721s libhamcrest-java libharfbuzz0b libhawtjni-runtime-java libhtsjdk-java 721s libhttpclient-java libhttpcore-java libhttpmime-java libinchi1 721s libintervalstorej-java libisorelax-java libistack-commons-java 721s libitext5-java libjaba-client-java libjackson2-annotations-java 721s libjackson2-core-java libjackson2-databind-java libjansi-java 721s libjansi-native-java libjansi1-java libjaxb-api-java libjaxb-java 721s libjaxen-java libjaxrs-api-java libjaxws-api-java libjaxws-java libjbig0 721s libjersey1-client-java libjersey1-core-java libjetty9-java libjfreesvg-java 721s libjgrapht-java libjgraphx-java libjheaps-java libjline2-java libjmol-java 721s libjni-inchi-java libjni-inchi-jni libjpeg-turbo8 libjpeg8 721s libjson-simple-java libjsoup-java libjsp-api-java libjsr305-java 721s libjsr311-api-java libjswingreader-java libjws-api-java 721s libknopflerfish-osgi-framework-java liblcms2-2 liblerc4 liblightcouch-java 721s liblog4j1.2-java liblog4j2-java libmail-java libmaven-archiver-java 721s libmaven-compiler-plugin-java libmaven-file-management-java 721s libmaven-jar-plugin-java libmaven-parent-java libmaven-resolver-java 721s libmaven-shared-incremental-java libmaven-shared-io-java 721s libmaven-shared-utils-java libmaven3-core-java libmbedcrypto7t64 721s libmbedtls14t64 libmbedx509-1t64 libmetro-policy-java libmiglayout-java 721s libmimepull-java libmjson-java libmmtf-java libmongodb-java libmsgpack-java 721s libmsv-java libnaga-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni 721s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 721s libpixman-1-0 libplexus-archiver-java libplexus-cipher-java 721s libplexus-classworlds-java libplexus-compiler-java 721s libplexus-component-annotations-java libplexus-container-default-java 721s libplexus-interpolation-java libplexus-io-java libplexus-languages-java 721s libplexus-sec-dispatcher-java libplexus-utils2-java libqdox-java 721s libqdox2-java librelaxng-datatype-java librhino-java librngom-java 721s libsaaj-java libsaaj-ri-java libservlet-api-java libsharpyuv0 721s libsisu-inject-java libsisu-plexus-java libslf4j-java libsnappy-java 721s libsnappy-jni libsnappy1v5 libstax-ex-java libstax2-api-java 721s libstreambuffer-java libthai-data libthai0 libtiff6 libtxw2-java 721s libvamsas-client-java libvecmath-java libvulkan1 libwagon-http-java 721s libwagon-provider-api-java libwayland-client0 libwayland-cursor0 721s libwayland-egl1 libwayland-server0 libwebp7 libwebsocket-api-java 721s libwoodstox-java libwsdl4j-java libx11-xcb1 libxbean-reflect-java 721s libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 721s libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 721s libxcursor1 libxdamage1 libxerces2-java libxfixes3 libxi6 libxinerama1 721s libxml-commons-external-java libxml-commons-resolver1.1-java libxpp3-java 721s libxrandr2 libxrender1 libxshmfence1 libxsom-java libxstream-java libxtst6 721s libxxf86vm1 libxz-java mesa-libgallium ncbi-vdb-data openjdk-21-jre 721s openjdk-21-jre-headless ubuntu-mono varna x11-common 721s 0 upgraded, 270 newly installed, 0 to remove and 0 not upgraded. 721s Need to get 190 MB/190 MB of archives. 721s After this operation, 498 MB of additional disk space will be used. 721s Get:1 /tmp/autopkgtest.d7OWAi/5-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [704 B] 721s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 721s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 721s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 721s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.21-1 [46.2 kB] 721s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 721s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 721s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 721s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 721s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 721s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1 [145 kB] 721s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 gtk-update-icon-cache arm64 4.16.2+ds-2 [51.1 kB] 721s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 hicolor-icon-theme all 0.18-1 [13.5 kB] 721s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 humanity-icon-theme all 0.6.16 [1282 kB] 722s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 ubuntu-mono all 24.04-0ubuntu1 [151 kB] 722s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 adwaita-icon-theme all 47.0-1 [525 kB] 722s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 ca-certificates-java all 20240118 [11.6 kB] 722s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 java-common all 0.76 [6852 B] 722s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.14-2build1 [161 kB] 722s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcsclite1 arm64 2.3.0-1 [24.4 kB] 722s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre-headless arm64 21.0.5+11-1 [45.7 MB] 723s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre-headless arm64 2:1.21-76 [3176 B] 723s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 ant all 1.10.14-1 [2147 kB] 723s Get:24 http://ftpmaster.internal/ubuntu plucky/universe arm64 ant-optional all 1.10.14-1 [451 kB] 723s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 libantlr-java all 2.7.7+dfsg-14 [453 kB] 723s Get:26 http://ftpmaster.internal/ubuntu plucky/universe arm64 antlr all 2.7.7+dfsg-14 [5162 B] 723s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 at-spi2-common all 2.54.0-1 [8774 B] 723s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libdconf1 arm64 0.40.0-4build2 [39.8 kB] 723s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-service arm64 0.40.0-4build2 [26.9 kB] 723s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-gsettings-backend arm64 0.40.0-4build2 [22.0 kB] 723s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [55.0 kB] 724s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 724s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [80.2 kB] 724s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [66.6 kB] 724s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 724s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 724s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 724s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 724s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.42.2-1build1 [204 kB] 724s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 724s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 724s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 724s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 724s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo-gobject2 arm64 1.18.2-2 [127 kB] 724s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolord2 arm64 1.4.7-1build2 [149 kB] 724s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common-data arm64 0.8-13ubuntu6 [29.6 kB] 724s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common3 arm64 0.8-13ubuntu6 [23.3 kB] 724s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-client3 arm64 0.8-13ubuntu6 [27.2 kB] 724s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libcups2t64 arm64 2.4.10-1ubuntu2 [271 kB] 724s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libepoxy0 arm64 1.5.10-1build1 [240 kB] 724s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 724s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 9.0.0-1 [486 kB] 724s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 724s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 724s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 724s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 724s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-2 [233 kB] 724s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-2 [48.8 kB] 724s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-2 [27.5 kB] 724s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB] 724s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-cursor0 arm64 1.23.0-1 [10.6 kB] 724s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-egl1 arm64 1.23.0-1 [5636 B] 724s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcomposite1 arm64 1:0.4.5-1build3 [6336 B] 724s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB] 724s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcursor1 arm64 1:1.2.2-1 [21.2 kB] 724s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libxdamage1 arm64 1:1.1.6-1build1 [6236 B] 724s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libxinerama1 arm64 2:1.1.4-3build1 [6394 B] 724s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrandr2 arm64 2:1.5.4-1 [19.6 kB] 724s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-common all 3.24.43-3ubuntu2 [1202 kB] 724s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-0t64 arm64 3.24.43-3ubuntu2 [2898 kB] 724s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB] 724s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB] 724s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.7-1build1 [7870 B] 724s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B] 724s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B] 724s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB] 724s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B] 724s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB] 724s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B] 724s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB] 724s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B] 724s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B] 724s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.122-1 [20.9 kB] 724s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.122-1 [20.8 kB] 724s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB] 724s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.290.0-1 [153 kB] 724s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB] 724s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB] 724s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB] 724s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB] 724s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB] 724s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB] 724s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2-data all 1.2.12-1 [21.0 kB] 724s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2t64 arm64 1.2.12-1 [384 kB] 725s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 725s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 725s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 libxtst6 arm64 2:1.2.3-1.1build1 [13.0 kB] 725s Get:98 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre arm64 21.0.5+11-1 [221 kB] 725s Get:99 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre arm64 2:1.21-76 [918 B] 725s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 ivy all 2.5.2-1 [1286 kB] 725s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhamcrest-java all 2.2-2 [117 kB] 725s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 junit4 all 4.13.2-4 [347 kB] 725s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libasm-java all 9.7-2 [386 kB] 725s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 libbsf-java all 1:2.4.0-8 [73.6 kB] 725s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-cli-java all 1.6.0-1 [59.9 kB] 725s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapache-pom-java all 33-2 [5874 B] 725s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-parent-java all 56-1 [10.7 kB] 725s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 725s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjansi-java all 2.4.1-2 [83.0 kB] 725s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhawtjni-runtime-java all 1.18-1 [28.9 kB] 725s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjansi-native-java all 1.8-2 [24.1 kB] 725s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjansi1-java all 1.18-3ubuntu1 [56.0 kB] 725s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjline2-java all 2.14.6-5 [150 kB] 725s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjsp-api-java all 2.3.4-3 [53.7 kB] 725s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqdox-java all 1.12.1-4 [172 kB] 725s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libservlet-api-java all 4.0.1-2 [81.0 kB] 725s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxpp3-java all 1.1.4c-3 [292 kB] 725s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxstream-java all 1.4.20-1 [561 kB] 725s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 groovy all 2.4.21-10 [10.8 MB] 726s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-discovery-java all 0.5-4 [70.8 kB] 726s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 libactivation-java all 1.2.0-2 [84.7 kB] 726s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxb-api-java all 2.3.1-1 [119 kB] 726s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 libstax-ex-java all 1.7.8-3 [40.9 kB] 726s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 libstreambuffer-java all 1.5.4-1.1 [74.0 kB] 726s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 librelaxng-datatype-java all 1.0+ds1-3.1 [11.8 kB] 726s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxsom-java all 2.3.0.1-10.1 [397 kB] 726s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfastinfoset-java all 1.2.12-3 [343 kB] 726s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.2 kB] 726s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgmbal-commons-java all 3.2.1-b003-1.1 [46.6 kB] 726s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgmbal-pfl-java all 4.0.1-b003-2 [1029 kB] 726s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgmbal-java all 4.0.0-b002-1.1 [188 kB] 726s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 libargs4j-java all 2.33-2 [137 kB] 726s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxen-java all 1.1.6-5 [213 kB] 726s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdom4j-java all 2.1.4-1 [310 kB] 726s Get:135 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-io-java all 2.16.1-1 [451 kB] 726s Get:136 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-shared-utils-java all 3.3.4-1 [137 kB] 726s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 libatinject-jsr330-api-java all 1.0+ds1-5 [5348 B] 726s Get:138 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-lang3-java all 3.14.0-1 [586 kB] 726s Get:139 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaopalliance-java all 20070526-7 [8166 B] 726s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 liberror-prone-java all 2.18.0-1 [22.5 kB] 726s Get:141 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjsr305-java all 0.1~+svn49-11 [27.0 kB] 726s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 libguava-java all 32.0.1-1 [2692 kB] 726s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 libguice-java all 4.2.3-2 [1434 kB] 726s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-parent-java all 43-2 [6306 B] 726s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-utils2-java all 3.4.2-1 [256 kB] 726s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 libwagon-provider-api-java all 3.5.3-1 [47.9 kB] 726s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-resolver-java all 1.6.3-1 [544 kB] 726s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-cipher-java all 2.0-1 [14.7 kB] 726s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-classworlds-java all 2.7.0-1 [50.0 kB] 726s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-component-annotations-java all 2.1.1-1 [6550 B] 726s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-interpolation-java all 1.26-1 [76.8 kB] 726s Get:152 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-sec-dispatcher-java all 2.0-3 [28.1 kB] 726s Get:153 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgeronimo-interceptor-3.0-spec-java all 1.0.1-4fakesync [8616 B] 726s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcdi-api-java all 1.2-3 [54.3 kB] 726s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 libslf4j-java all 1.7.32-1 [141 kB] 726s Get:156 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsisu-inject-java all 0.3.4-2 [347 kB] 726s Get:157 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsisu-plexus-java all 0.3.4-3 [181 kB] 726s Get:158 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven3-core-java all 3.8.8-1 [1572 kB] 726s Get:159 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-shared-io-java all 3.0.0-4 [32.6 kB] 726s Get:160 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-file-management-java all 3.0.0-1 [35.1 kB] 726s Get:161 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-compress-java all 1.25.0-1 [612 kB] 726s Get:162 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-io-java all 3.3.1-2 [64.4 kB] 726s Get:163 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 726s Get:164 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-jni arm64 1.1.10.5-2 [6618 B] 726s Get:165 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-java all 1.1.10.5-2 [83.7 kB] 726s Get:166 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxz-java all 1.9-1 [140 kB] 726s Get:167 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-archiver-java all 4.6.1-1 [185 kB] 726s Get:168 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhttpcore-java all 4.4.16-1 [612 kB] 726s Get:169 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-codec-java all 1.16.0-1 [306 kB] 726s Get:170 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhttpclient-java all 4.5.14-1 [1241 kB] 726s Get:171 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjsoup-java all 1.15.3-1 [407 kB] 726s Get:172 http://ftpmaster.internal/ubuntu plucky/universe arm64 libwagon-http-java all 3.5.3-1 [48.8 kB] 726s Get:173 http://ftpmaster.internal/ubuntu plucky/universe arm64 libistack-commons-java all 3.0.6-5 [145 kB] 726s Get:174 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcodemodel-java all 2.6+jaxb2.3.0.1-10.1 [164 kB] 726s Get:175 http://ftpmaster.internal/ubuntu plucky/universe arm64 librngom-java all 2.3.0.1-10.1 [289 kB] 727s Get:176 http://ftpmaster.internal/ubuntu plucky/universe arm64 libtxw2-java all 2.3.0.1-10.1 [133 kB] 727s Get:177 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxml-commons-resolver1.1-java all 1.2-11 [97.6 kB] 727s Get:178 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdtd-parser-java all 1.2-1 [64.9 kB] 727s Get:179 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxb-java all 2.3.0.1-10.1 [1967 kB] 727s Get:180 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsaaj-java all 1.4.0-4 [38.2 kB] 727s Get:181 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxws-api-java all 2.3.0-1.1 [49.9 kB] 727s Get:182 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjws-api-java all 1.1-2 [21.2 kB] 727s Get:183 http://ftpmaster.internal/ubuntu plucky/universe arm64 libknopflerfish-osgi-framework-java all 6.1.1-3.1 [642 kB] 727s Get:184 http://ftpmaster.internal/ubuntu plucky/universe arm64 libisorelax-java all 20041111-14 [63.4 kB] 727s Get:185 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxml-commons-external-java all 1.4.01-6 [240 kB] 727s Get:186 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxerces2-java all 2.12.2-1 [1430 kB] 727s Get:187 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmsv-java all 2009.1+dfsg1-6 [760 kB] 727s Get:188 http://ftpmaster.internal/ubuntu plucky/universe arm64 libstax2-api-java all 4.1-1 [152 kB] 727s Get:189 http://ftpmaster.internal/ubuntu plucky/universe arm64 libwoodstox-java all 1:6.2.1-1 [1122 kB] 727s Get:190 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmetro-policy-java all 2.7.2-4 [170 kB] 727s Get:191 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmimepull-java all 1.9.7-2 [66.9 kB] 727s Get:192 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsaaj-ri-java all 1.4.1-1.1 [461 kB] 727s Get:193 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxws-java all 2.3.0.2-2 [3046 kB] 727s Get:194 http://ftpmaster.internal/ubuntu plucky/universe arm64 javahelp2 all 2.0.05.ds1-10 [942 kB] 727s Get:195 http://ftpmaster.internal/ubuntu plucky/universe arm64 libandroid-json-org-java all 20121204-20090211-5 [35.9 kB] 727s Get:196 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapache-mime4j-java all 0.8.11-1 [442 kB] 727s Get:197 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-httpclient-java all 3.1-16 [289 kB] 727s Get:198 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmail-java all 1.6.5-2 [681 kB] 727s Get:199 http://ftpmaster.internal/ubuntu plucky/universe arm64 libwsdl4j-java all 1.6.3-4.1 [184 kB] 727s Get:200 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaxis-java all 1.4-29 [1499 kB] 727s Get:201 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgoogle-gson-java all 2.10.1-1 [252 kB] 727s Get:202 http://ftpmaster.internal/ubuntu plucky/universe arm64 libciftools-java all 6.0.0-1 [2213 kB] 727s Get:203 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-math-java all 2.2-8 [921 kB] 728s Get:204 http://ftpmaster.internal/ubuntu plucky/universe arm64 libitext5-java all 5.5.13.3-4 [2691 kB] 728s Get:205 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjackson2-annotations-java all 2.14.0-1 [64.7 kB] 728s Get:206 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjackson2-core-java all 2.14.1-1 [432 kB] 728s Get:207 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjackson2-databind-java all 2.14.0-1 [1531 kB] 728s Get:208 http://ftpmaster.internal/ubuntu plucky/universe arm64 libantlr4-runtime-java all 4.9.2-2 [308 kB] 728s Get:209 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapfloat-java all 1.13.0-1 [698 kB] 728s Get:210 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-archiver-java all 3.6.2-1 [26.0 kB] 728s Get:211 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-jar-plugin-java all 3.3.0-2 [23.9 kB] 728s Get:212 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-text-java all 1.11.0-1 [215 kB] 728s Get:213 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfastutil-java all 8.5.14+dfsg-1 [20.2 MB] 730s Get:214 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjheaps-java all 0.14-2 [143 kB] 730s Get:215 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjgraphx-java all 2.1.0.7-4 [803 kB] 730s Get:216 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjgrapht-java all 1.5.2-1 [1584 kB] 730s Get:217 http://ftpmaster.internal/ubuntu plucky/universe arm64 libinchi1 arm64 1.03+dfsg-4build1 [451 kB] 730s Get:218 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjni-inchi-jni arm64 0.8+dfsg-7build1 [10.2 kB] 730s Get:219 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-exec-java all 1.3-2 [48.1 kB] 730s Get:220 http://ftpmaster.internal/ubuntu plucky/universe arm64 libexec-maven-plugin-java all 3.1.0-2 [66.1 kB] 730s Get:221 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-shared-incremental-java all 1.1-6 [9898 B] 730s Get:222 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-lang-java all 2.6-10 [270 kB] 730s Get:223 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxbean-reflect-java all 4.5-8 [132 kB] 730s Get:224 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-container-default-java all 2.1.1-1 [191 kB] 730s Get:225 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-compiler-java all 2.13.0-1 [98.9 kB] 730s Get:226 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqdox2-java all 2.0.3-1 [296 kB] 730s Get:227 http://ftpmaster.internal/ubuntu plucky/universe arm64 libplexus-languages-java all 1.1.1-2 [46.8 kB] 730s Get:228 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmaven-compiler-plugin-java all 3.10.1-2 [58.5 kB] 730s Get:229 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblog4j1.2-java all 1.2.17-11 [439 kB] 730s Get:230 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjni-inchi-java all 0.8+dfsg-7build1 [32.6 kB] 730s Get:231 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnaga-java all 3.0+svn80-5 [43.5 kB] 730s Get:232 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjmol-java all 16.2.15+dfsg-1 [8680 kB] 731s Get:233 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjson-simple-java all 2.3.0-1 [61.0 kB] 731s Get:234 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmsgpack-java all 0.9.6-1 [159 kB] 731s Get:235 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmmtf-java all 1.0.11-1 [184 kB] 731s Get:236 http://ftpmaster.internal/ubuntu plucky/universe arm64 libvecmath-java all 1.5.2-7 [96.9 kB] 731s Get:237 http://ftpmaster.internal/ubuntu plucky/universe arm64 libbiojava6-java all 6.1.0+dfsg-4 [5330 kB] 731s Get:238 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-jexl2-java all 2.1.1-6 [250 kB] 731s Get:239 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmjson-java all 1.4.0-3 [60.4 kB] 731s Get:240 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedcrypto7t64 arm64 2.28.8-1 [209 kB] 731s Get:241 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedx509-1t64 arm64 2.28.8-1 [47.2 kB] 731s Get:242 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedtls14t64 arm64 2.28.8-1 [82.2 kB] 731s Get:243 http://ftpmaster.internal/ubuntu plucky/universe arm64 ncbi-vdb-data all 3.0.2+dfsg-2build2 [67.5 kB] 731s Get:244 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-vdb3 arm64 3.0.2+dfsg-2build2 [1143 kB] 732s Get:245 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-ngs3 arm64 3.0.3+dfsg-9ubuntu1 [145 kB] 732s Get:246 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-jni arm64 3.0.3+dfsg-9ubuntu1 [4844 B] 732s Get:247 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-java arm64 3.0.3+dfsg-9ubuntu1 [91.1 kB] 732s Get:248 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 librhino-java all 1.7.15-1 [1354 kB] 732s Get:249 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtsjdk-java all 4.1.0+dfsg-2 [1823 kB] 732s Get:250 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhttpmime-java all 4.5.14-1 [39.6 kB] 732s Get:251 http://ftpmaster.internal/ubuntu plucky/universe arm64 libintervalstorej-java all 1.2+dfsg-5 [25.8 kB] 732s Get:252 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaba-client-java all 2.2.0-2 [400 kB] 732s Get:253 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxrs-api-java all 2.1.2-2 [115 kB] 732s Get:254 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjsr311-api-java all 1.1.1-1.1 [46.4 kB] 732s Get:255 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjersey1-core-java all 1.19.3-8 [390 kB] 732s Get:256 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjersey1-client-java all 1.19.3-8 [127 kB] 732s Get:257 http://ftpmaster.internal/ubuntu plucky/universe arm64 libel-api-java all 3.0.0-3 [64.9 kB] 732s Get:258 http://ftpmaster.internal/ubuntu plucky/universe arm64 libwebsocket-api-java all 1.1-2 [40.1 kB] 732s Get:259 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjetty9-java all 9.4.55-1 [2787 kB] 732s Get:260 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjfreesvg-java all 4.1-2 [44.1 kB] 732s Get:261 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjswingreader-java all 0.3-4 [81.5 kB] 732s Get:262 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblightcouch-java all 0.2.0-1 [74.2 kB] 732s Get:263 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmongodb-java all 3.6.3-2 [1899 kB] 732s Get:264 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblog4j2-java all 2.19.0-2 [2294 kB] 732s Get:265 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmiglayout-java all 11.1+ds-1 [177 kB] 732s Get:266 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcastor-core-java all 1.3.2-7 [54.1 kB] 732s Get:267 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcastor-xml-java all 1.3.2-7 [735 kB] 733s Get:268 http://ftpmaster.internal/ubuntu plucky/universe arm64 libvamsas-client-java all 0.2+dfsg-2 [583 kB] 733s Get:269 http://ftpmaster.internal/ubuntu plucky/universe arm64 varna all 3-93+ds-6 [795 kB] 733s Get:270 http://ftpmaster.internal/ubuntu plucky/universe arm64 jalview all 2.11.3.1+dfsg-1 [8735 kB] 734s Preconfiguring packages ... 734s Fetched 190 MB in 12s (15.5 MB/s) 734s Selecting previously unselected package libgdk-pixbuf2.0-common. 734s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 734s Preparing to unpack .../000-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 734s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 734s Selecting previously unselected package libjpeg-turbo8:arm64. 734s Preparing to unpack .../001-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 734s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 734s Selecting previously unselected package libjpeg8:arm64. 734s Preparing to unpack .../002-libjpeg8_8c-2ubuntu11_arm64.deb ... 734s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 734s Selecting previously unselected package libdeflate0:arm64. 734s Preparing to unpack .../003-libdeflate0_1.21-1_arm64.deb ... 734s Unpacking libdeflate0:arm64 (1.21-1) ... 734s Selecting previously unselected package libjbig0:arm64. 734s Preparing to unpack .../004-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 734s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 734s Selecting previously unselected package liblerc4:arm64. 734s Preparing to unpack .../005-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 734s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 734s Selecting previously unselected package libsharpyuv0:arm64. 734s Preparing to unpack .../006-libsharpyuv0_1.4.0-0.1_arm64.deb ... 734s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 734s Selecting previously unselected package libwebp7:arm64. 734s Preparing to unpack .../007-libwebp7_1.4.0-0.1_arm64.deb ... 734s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 734s Selecting previously unselected package libtiff6:arm64. 734s Preparing to unpack .../008-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 734s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 734s Selecting previously unselected package libgdk-pixbuf-2.0-0:arm64. 734s Preparing to unpack .../009-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_arm64.deb ... 734s Unpacking libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 735s Selecting previously unselected package gtk-update-icon-cache. 735s Preparing to unpack .../010-gtk-update-icon-cache_4.16.2+ds-2_arm64.deb ... 735s No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. 735s No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. 735s Unpacking gtk-update-icon-cache (4.16.2+ds-2) ... 735s Selecting previously unselected package hicolor-icon-theme. 735s Preparing to unpack .../011-hicolor-icon-theme_0.18-1_all.deb ... 735s Unpacking hicolor-icon-theme (0.18-1) ... 735s Selecting previously unselected package humanity-icon-theme. 735s Preparing to unpack .../012-humanity-icon-theme_0.6.16_all.deb ... 735s Unpacking humanity-icon-theme (0.6.16) ... 735s Selecting previously unselected package ubuntu-mono. 735s Preparing to unpack .../013-ubuntu-mono_24.04-0ubuntu1_all.deb ... 735s Unpacking ubuntu-mono (24.04-0ubuntu1) ... 736s Selecting previously unselected package adwaita-icon-theme. 736s Preparing to unpack .../014-adwaita-icon-theme_47.0-1_all.deb ... 736s Unpacking adwaita-icon-theme (47.0-1) ... 736s Selecting previously unselected package ca-certificates-java. 736s Preparing to unpack .../015-ca-certificates-java_20240118_all.deb ... 736s Unpacking ca-certificates-java (20240118) ... 736s Selecting previously unselected package java-common. 736s Preparing to unpack .../016-java-common_0.76_all.deb ... 736s Unpacking java-common (0.76) ... 736s Selecting previously unselected package liblcms2-2:arm64. 736s Preparing to unpack .../017-liblcms2-2_2.14-2build1_arm64.deb ... 736s Unpacking liblcms2-2:arm64 (2.14-2build1) ... 736s Selecting previously unselected package libpcsclite1:arm64. 736s Preparing to unpack .../018-libpcsclite1_2.3.0-1_arm64.deb ... 736s Unpacking libpcsclite1:arm64 (2.3.0-1) ... 736s Selecting previously unselected package openjdk-21-jre-headless:arm64. 736s Preparing to unpack .../019-openjdk-21-jre-headless_21.0.5+11-1_arm64.deb ... 736s Unpacking openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 737s Selecting previously unselected package default-jre-headless. 737s Preparing to unpack .../020-default-jre-headless_2%3a1.21-76_arm64.deb ... 737s Unpacking default-jre-headless (2:1.21-76) ... 737s Selecting previously unselected package ant. 737s Preparing to unpack .../021-ant_1.10.14-1_all.deb ... 737s Unpacking ant (1.10.14-1) ... 737s Selecting previously unselected package ant-optional. 737s Preparing to unpack .../022-ant-optional_1.10.14-1_all.deb ... 737s Unpacking ant-optional (1.10.14-1) ... 737s Selecting previously unselected package libantlr-java. 737s Preparing to unpack .../023-libantlr-java_2.7.7+dfsg-14_all.deb ... 737s Unpacking libantlr-java (2.7.7+dfsg-14) ... 737s Selecting previously unselected package antlr. 737s Preparing to unpack .../024-antlr_2.7.7+dfsg-14_all.deb ... 737s Unpacking antlr (2.7.7+dfsg-14) ... 737s Selecting previously unselected package at-spi2-common. 737s Preparing to unpack .../025-at-spi2-common_2.54.0-1_all.deb ... 737s Unpacking at-spi2-common (2.54.0-1) ... 737s Selecting previously unselected package libdconf1:arm64. 738s Preparing to unpack .../026-libdconf1_0.40.0-4build2_arm64.deb ... 738s Unpacking libdconf1:arm64 (0.40.0-4build2) ... 738s Selecting previously unselected package dconf-service. 738s Preparing to unpack .../027-dconf-service_0.40.0-4build2_arm64.deb ... 738s Unpacking dconf-service (0.40.0-4build2) ... 738s Selecting previously unselected package dconf-gsettings-backend:arm64. 738s Preparing to unpack .../028-dconf-gsettings-backend_0.40.0-4build2_arm64.deb ... 738s Unpacking dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 738s Selecting previously unselected package libatk1.0-0t64:arm64. 738s Preparing to unpack .../029-libatk1.0-0t64_2.54.0-1_arm64.deb ... 738s Unpacking libatk1.0-0t64:arm64 (2.54.0-1) ... 738s Selecting previously unselected package libxi6:arm64. 738s Preparing to unpack .../030-libxi6_2%3a1.8.2-1_arm64.deb ... 738s Unpacking libxi6:arm64 (2:1.8.2-1) ... 738s Selecting previously unselected package libatspi2.0-0t64:arm64. 738s Preparing to unpack .../031-libatspi2.0-0t64_2.54.0-1_arm64.deb ... 738s Unpacking libatspi2.0-0t64:arm64 (2.54.0-1) ... 738s Selecting previously unselected package libatk-bridge2.0-0t64:arm64. 738s Preparing to unpack .../032-libatk-bridge2.0-0t64_2.54.0-1_arm64.deb ... 738s Unpacking libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 738s Selecting previously unselected package fonts-dejavu-mono. 738s Preparing to unpack .../033-fonts-dejavu-mono_2.37-8_all.deb ... 738s Unpacking fonts-dejavu-mono (2.37-8) ... 738s Selecting previously unselected package fonts-dejavu-core. 738s Preparing to unpack .../034-fonts-dejavu-core_2.37-8_all.deb ... 738s Unpacking fonts-dejavu-core (2.37-8) ... 738s Selecting previously unselected package fontconfig-config. 738s Preparing to unpack .../035-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 738s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 738s Selecting previously unselected package libfontconfig1:arm64. 738s Preparing to unpack .../036-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 738s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 738s Selecting previously unselected package libpixman-1-0:arm64. 738s Preparing to unpack .../037-libpixman-1-0_0.42.2-1build1_arm64.deb ... 738s Unpacking libpixman-1-0:arm64 (0.42.2-1build1) ... 738s Selecting previously unselected package libxcb-render0:arm64. 739s Preparing to unpack .../038-libxcb-render0_1.17.0-2_arm64.deb ... 739s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 739s Selecting previously unselected package libxcb-shm0:arm64. 739s Preparing to unpack .../039-libxcb-shm0_1.17.0-2_arm64.deb ... 739s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 739s Selecting previously unselected package libxrender1:arm64. 739s Preparing to unpack .../040-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 739s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 739s Selecting previously unselected package libcairo2:arm64. 739s Preparing to unpack .../041-libcairo2_1.18.2-2_arm64.deb ... 739s Unpacking libcairo2:arm64 (1.18.2-2) ... 739s Selecting previously unselected package libcairo-gobject2:arm64. 739s Preparing to unpack .../042-libcairo-gobject2_1.18.2-2_arm64.deb ... 739s Unpacking libcairo-gobject2:arm64 (1.18.2-2) ... 739s Selecting previously unselected package libcolord2:arm64. 739s Preparing to unpack .../043-libcolord2_1.4.7-1build2_arm64.deb ... 739s Unpacking libcolord2:arm64 (1.4.7-1build2) ... 739s Selecting previously unselected package libavahi-common-data:arm64. 739s Preparing to unpack .../044-libavahi-common-data_0.8-13ubuntu6_arm64.deb ... 739s Unpacking libavahi-common-data:arm64 (0.8-13ubuntu6) ... 739s Selecting previously unselected package libavahi-common3:arm64. 739s Preparing to unpack .../045-libavahi-common3_0.8-13ubuntu6_arm64.deb ... 739s Unpacking libavahi-common3:arm64 (0.8-13ubuntu6) ... 739s Selecting previously unselected package libavahi-client3:arm64. 739s Preparing to unpack .../046-libavahi-client3_0.8-13ubuntu6_arm64.deb ... 739s Unpacking libavahi-client3:arm64 (0.8-13ubuntu6) ... 739s Selecting previously unselected package libcups2t64:arm64. 739s Preparing to unpack .../047-libcups2t64_2.4.10-1ubuntu2_arm64.deb ... 739s Unpacking libcups2t64:arm64 (2.4.10-1ubuntu2) ... 739s Selecting previously unselected package libepoxy0:arm64. 739s Preparing to unpack .../048-libepoxy0_1.5.10-1build1_arm64.deb ... 739s Unpacking libepoxy0:arm64 (1.5.10-1build1) ... 739s Selecting previously unselected package libgraphite2-3:arm64. 739s Preparing to unpack .../049-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 739s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 739s Selecting previously unselected package libharfbuzz0b:arm64. 739s Preparing to unpack .../050-libharfbuzz0b_9.0.0-1_arm64.deb ... 739s Unpacking libharfbuzz0b:arm64 (9.0.0-1) ... 739s Selecting previously unselected package fontconfig. 739s Preparing to unpack .../051-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 739s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 739s Selecting previously unselected package libthai-data. 739s Preparing to unpack .../052-libthai-data_0.1.29-2build1_all.deb ... 739s Unpacking libthai-data (0.1.29-2build1) ... 739s Selecting previously unselected package libdatrie1:arm64. 740s Preparing to unpack .../053-libdatrie1_0.2.13-3build1_arm64.deb ... 740s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 740s Selecting previously unselected package libthai0:arm64. 740s Preparing to unpack .../054-libthai0_0.1.29-2build1_arm64.deb ... 740s Unpacking libthai0:arm64 (0.1.29-2build1) ... 740s Selecting previously unselected package libpango-1.0-0:arm64. 740s Preparing to unpack .../055-libpango-1.0-0_1.54.0+ds-2_arm64.deb ... 740s Unpacking libpango-1.0-0:arm64 (1.54.0+ds-2) ... 740s Selecting previously unselected package libpangoft2-1.0-0:arm64. 740s Preparing to unpack .../056-libpangoft2-1.0-0_1.54.0+ds-2_arm64.deb ... 740s Unpacking libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 740s Selecting previously unselected package libpangocairo-1.0-0:arm64. 740s Preparing to unpack .../057-libpangocairo-1.0-0_1.54.0+ds-2_arm64.deb ... 740s Unpacking libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 740s Selecting previously unselected package libwayland-client0:arm64. 740s Preparing to unpack .../058-libwayland-client0_1.23.0-1_arm64.deb ... 740s Unpacking libwayland-client0:arm64 (1.23.0-1) ... 740s Selecting previously unselected package libwayland-cursor0:arm64. 740s Preparing to unpack .../059-libwayland-cursor0_1.23.0-1_arm64.deb ... 740s Unpacking libwayland-cursor0:arm64 (1.23.0-1) ... 740s Selecting previously unselected package libwayland-egl1:arm64. 740s Preparing to unpack .../060-libwayland-egl1_1.23.0-1_arm64.deb ... 740s Unpacking libwayland-egl1:arm64 (1.23.0-1) ... 740s Selecting previously unselected package libxcomposite1:arm64. 740s Preparing to unpack .../061-libxcomposite1_1%3a0.4.5-1build3_arm64.deb ... 740s Unpacking libxcomposite1:arm64 (1:0.4.5-1build3) ... 740s Selecting previously unselected package libxfixes3:arm64. 740s Preparing to unpack .../062-libxfixes3_1%3a6.0.0-2build1_arm64.deb ... 740s Unpacking libxfixes3:arm64 (1:6.0.0-2build1) ... 740s Selecting previously unselected package libxcursor1:arm64. 740s Preparing to unpack .../063-libxcursor1_1%3a1.2.2-1_arm64.deb ... 740s Unpacking libxcursor1:arm64 (1:1.2.2-1) ... 740s Selecting previously unselected package libxdamage1:arm64. 740s Preparing to unpack .../064-libxdamage1_1%3a1.1.6-1build1_arm64.deb ... 740s Unpacking libxdamage1:arm64 (1:1.1.6-1build1) ... 740s Selecting previously unselected package libxinerama1:arm64. 740s Preparing to unpack .../065-libxinerama1_2%3a1.1.4-3build1_arm64.deb ... 740s Unpacking libxinerama1:arm64 (2:1.1.4-3build1) ... 740s Selecting previously unselected package libxrandr2:arm64. 740s Preparing to unpack .../066-libxrandr2_2%3a1.5.4-1_arm64.deb ... 740s Unpacking libxrandr2:arm64 (2:1.5.4-1) ... 740s Selecting previously unselected package libgtk-3-common. 740s Preparing to unpack .../067-libgtk-3-common_3.24.43-3ubuntu2_all.deb ... 740s Unpacking libgtk-3-common (3.24.43-3ubuntu2) ... 740s Selecting previously unselected package libgtk-3-0t64:arm64. 740s Preparing to unpack .../068-libgtk-3-0t64_3.24.43-3ubuntu2_arm64.deb ... 740s Unpacking libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 740s Selecting previously unselected package libglvnd0:arm64. 740s Preparing to unpack .../069-libglvnd0_1.7.0-1build1_arm64.deb ... 740s Unpacking libglvnd0:arm64 (1.7.0-1build1) ... 740s Selecting previously unselected package libglapi-mesa:arm64. 740s Preparing to unpack .../070-libglapi-mesa_24.2.3-1ubuntu1_arm64.deb ... 740s Unpacking libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 740s Selecting previously unselected package libx11-xcb1:arm64. 740s Preparing to unpack .../071-libx11-xcb1_2%3a1.8.7-1build1_arm64.deb ... 740s Unpacking libx11-xcb1:arm64 (2:1.8.7-1build1) ... 741s Selecting previously unselected package libxcb-dri2-0:arm64. 741s Preparing to unpack .../072-libxcb-dri2-0_1.17.0-2_arm64.deb ... 741s Unpacking libxcb-dri2-0:arm64 (1.17.0-2) ... 741s Selecting previously unselected package libxcb-dri3-0:arm64. 741s Preparing to unpack .../073-libxcb-dri3-0_1.17.0-2_arm64.deb ... 741s Unpacking libxcb-dri3-0:arm64 (1.17.0-2) ... 741s Selecting previously unselected package libxcb-glx0:arm64. 741s Preparing to unpack .../074-libxcb-glx0_1.17.0-2_arm64.deb ... 741s Unpacking libxcb-glx0:arm64 (1.17.0-2) ... 741s Selecting previously unselected package libxcb-present0:arm64. 741s Preparing to unpack .../075-libxcb-present0_1.17.0-2_arm64.deb ... 741s Unpacking libxcb-present0:arm64 (1.17.0-2) ... 741s Selecting previously unselected package libxcb-randr0:arm64. 741s Preparing to unpack .../076-libxcb-randr0_1.17.0-2_arm64.deb ... 741s Unpacking libxcb-randr0:arm64 (1.17.0-2) ... 741s Selecting previously unselected package libxcb-sync1:arm64. 741s Preparing to unpack .../077-libxcb-sync1_1.17.0-2_arm64.deb ... 741s Unpacking libxcb-sync1:arm64 (1.17.0-2) ... 741s Selecting previously unselected package libxcb-xfixes0:arm64. 741s Preparing to unpack .../078-libxcb-xfixes0_1.17.0-2_arm64.deb ... 741s Unpacking libxcb-xfixes0:arm64 (1.17.0-2) ... 741s Selecting previously unselected package libxshmfence1:arm64. 741s Preparing to unpack .../079-libxshmfence1_1.3-1build5_arm64.deb ... 741s Unpacking libxshmfence1:arm64 (1.3-1build5) ... 741s Selecting previously unselected package libxxf86vm1:arm64. 741s Preparing to unpack .../080-libxxf86vm1_1%3a1.1.4-1build4_arm64.deb ... 741s Unpacking libxxf86vm1:arm64 (1:1.1.4-1build4) ... 741s Selecting previously unselected package libdrm-amdgpu1:arm64. 741s Preparing to unpack .../081-libdrm-amdgpu1_2.4.122-1_arm64.deb ... 741s Unpacking libdrm-amdgpu1:arm64 (2.4.122-1) ... 741s Selecting previously unselected package libdrm-radeon1:arm64. 741s Preparing to unpack .../082-libdrm-radeon1_2.4.122-1_arm64.deb ... 741s Unpacking libdrm-radeon1:arm64 (2.4.122-1) ... 741s Selecting previously unselected package mesa-libgallium:arm64. 741s Preparing to unpack .../083-mesa-libgallium_24.2.3-1ubuntu1_arm64.deb ... 741s Unpacking mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 741s Selecting previously unselected package libvulkan1:arm64. 741s Preparing to unpack .../084-libvulkan1_1.3.290.0-1_arm64.deb ... 741s Unpacking libvulkan1:arm64 (1.3.290.0-1) ... 741s Selecting previously unselected package libwayland-server0:arm64. 741s Preparing to unpack .../085-libwayland-server0_1.23.0-1_arm64.deb ... 741s Unpacking libwayland-server0:arm64 (1.23.0-1) ... 741s Selecting previously unselected package libgbm1:arm64. 741s Preparing to unpack .../086-libgbm1_24.2.3-1ubuntu1_arm64.deb ... 741s Unpacking libgbm1:arm64 (24.2.3-1ubuntu1) ... 741s Selecting previously unselected package libgl1-mesa-dri:arm64. 741s Preparing to unpack .../087-libgl1-mesa-dri_24.2.3-1ubuntu1_arm64.deb ... 741s Unpacking libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 741s Selecting previously unselected package libglx-mesa0:arm64. 741s Preparing to unpack .../088-libglx-mesa0_24.2.3-1ubuntu1_arm64.deb ... 741s Unpacking libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 742s Selecting previously unselected package libglx0:arm64. 742s Preparing to unpack .../089-libglx0_1.7.0-1build1_arm64.deb ... 742s Unpacking libglx0:arm64 (1.7.0-1build1) ... 742s Selecting previously unselected package libgl1:arm64. 742s Preparing to unpack .../090-libgl1_1.7.0-1build1_arm64.deb ... 742s Unpacking libgl1:arm64 (1.7.0-1build1) ... 742s Selecting previously unselected package libasound2-data. 742s Preparing to unpack .../091-libasound2-data_1.2.12-1_all.deb ... 742s Unpacking libasound2-data (1.2.12-1) ... 742s Selecting previously unselected package libasound2t64:arm64. 742s Preparing to unpack .../092-libasound2t64_1.2.12-1_arm64.deb ... 742s Unpacking libasound2t64:arm64 (1.2.12-1) ... 742s Selecting previously unselected package libgif7:arm64. 742s Preparing to unpack .../093-libgif7_5.2.2-1ubuntu1_arm64.deb ... 742s Unpacking libgif7:arm64 (5.2.2-1ubuntu1) ... 742s Selecting previously unselected package x11-common. 742s Preparing to unpack .../094-x11-common_1%3a7.7+23ubuntu3_all.deb ... 742s Unpacking x11-common (1:7.7+23ubuntu3) ... 742s Selecting previously unselected package libxtst6:arm64. 742s Preparing to unpack .../095-libxtst6_2%3a1.2.3-1.1build1_arm64.deb ... 742s Unpacking libxtst6:arm64 (2:1.2.3-1.1build1) ... 742s Selecting previously unselected package openjdk-21-jre:arm64. 742s Preparing to unpack .../096-openjdk-21-jre_21.0.5+11-1_arm64.deb ... 742s Unpacking openjdk-21-jre:arm64 (21.0.5+11-1) ... 742s Selecting previously unselected package default-jre. 742s Preparing to unpack .../097-default-jre_2%3a1.21-76_arm64.deb ... 742s Unpacking default-jre (2:1.21-76) ... 742s Selecting previously unselected package ivy. 742s Preparing to unpack .../098-ivy_2.5.2-1_all.deb ... 742s Unpacking ivy (2.5.2-1) ... 742s Selecting previously unselected package libhamcrest-java. 742s Preparing to unpack .../099-libhamcrest-java_2.2-2_all.deb ... 742s Unpacking libhamcrest-java (2.2-2) ... 742s Selecting previously unselected package junit4. 742s Preparing to unpack .../100-junit4_4.13.2-4_all.deb ... 742s Unpacking junit4 (4.13.2-4) ... 742s Selecting previously unselected package libasm-java. 742s Preparing to unpack .../101-libasm-java_9.7-2_all.deb ... 742s Unpacking libasm-java (9.7-2) ... 742s Selecting previously unselected package libbsf-java. 742s Preparing to unpack .../102-libbsf-java_1%3a2.4.0-8_all.deb ... 742s Unpacking libbsf-java (1:2.4.0-8) ... 742s Selecting previously unselected package libcommons-cli-java. 742s Preparing to unpack .../103-libcommons-cli-java_1.6.0-1_all.deb ... 742s Unpacking libcommons-cli-java (1.6.0-1) ... 742s Selecting previously unselected package libapache-pom-java. 742s Preparing to unpack .../104-libapache-pom-java_33-2_all.deb ... 742s Unpacking libapache-pom-java (33-2) ... 742s Selecting previously unselected package libcommons-parent-java. 742s Preparing to unpack .../105-libcommons-parent-java_56-1_all.deb ... 742s Unpacking libcommons-parent-java (56-1) ... 742s Selecting previously unselected package libcommons-logging-java. 742s Preparing to unpack .../106-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ... 742s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ... 742s Selecting previously unselected package libjansi-java. 742s Preparing to unpack .../107-libjansi-java_2.4.1-2_all.deb ... 742s Unpacking libjansi-java (2.4.1-2) ... 742s Selecting previously unselected package libhawtjni-runtime-java. 742s Preparing to unpack .../108-libhawtjni-runtime-java_1.18-1_all.deb ... 742s Unpacking libhawtjni-runtime-java (1.18-1) ... 742s Selecting previously unselected package libjansi-native-java. 742s Preparing to unpack .../109-libjansi-native-java_1.8-2_all.deb ... 742s Unpacking libjansi-native-java (1.8-2) ... 742s Selecting previously unselected package libjansi1-java. 743s Preparing to unpack .../110-libjansi1-java_1.18-3ubuntu1_all.deb ... 743s Unpacking libjansi1-java (1.18-3ubuntu1) ... 743s Selecting previously unselected package libjline2-java. 743s Preparing to unpack .../111-libjline2-java_2.14.6-5_all.deb ... 743s Unpacking libjline2-java (2.14.6-5) ... 743s Selecting previously unselected package libjsp-api-java. 743s Preparing to unpack .../112-libjsp-api-java_2.3.4-3_all.deb ... 743s Unpacking libjsp-api-java (2.3.4-3) ... 743s Selecting previously unselected package libqdox-java. 743s Preparing to unpack .../113-libqdox-java_1.12.1-4_all.deb ... 743s Unpacking libqdox-java (1.12.1-4) ... 743s Selecting previously unselected package libservlet-api-java. 743s Preparing to unpack .../114-libservlet-api-java_4.0.1-2_all.deb ... 743s Unpacking libservlet-api-java (4.0.1-2) ... 743s Selecting previously unselected package libxpp3-java. 743s Preparing to unpack .../115-libxpp3-java_1.1.4c-3_all.deb ... 743s Unpacking libxpp3-java (1.1.4c-3) ... 743s Selecting previously unselected package libxstream-java. 743s Preparing to unpack .../116-libxstream-java_1.4.20-1_all.deb 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libstreambuffer-java. 743s Preparing to unpack .../122-libstreambuffer-java_1.5.4-1.1_all.deb ... 743s Unpacking libstreambuffer-java (1.5.4-1.1) ... 743s Selecting previously unselected package librelaxng-datatype-java. 743s Preparing to unpack .../123-librelaxng-datatype-java_1.0+ds1-3.1_all.deb ... 743s Unpacking librelaxng-datatype-java (1.0+ds1-3.1) ... 743s Selecting previously unselected package libxsom-java. 743s Preparing to unpack .../124-libxsom-java_2.3.0.1-10.1_all.deb ... 743s Unpacking libxsom-java (2.3.0.1-10.1) ... 743s Selecting previously unselected package libfastinfoset-java. 743s Preparing to unpack .../125-libfastinfoset-java_1.2.12-3_all.deb ... 743s Unpacking libfastinfoset-java (1.2.12-3) ... 743s Selecting previously unselected package libgeronimo-annotation-1.3-spec-java. 743s Preparing to unpack .../126-libgeronimo-annotation-1.3-spec-java_1.3-1_all.deb ... 743s Unpacking libgeronimo-annotation-1.3-spec-java (1.3-1) ... 744s Selecting previously unselected package libgmbal-commons-java. 744s Preparing to unpack .../127-libgmbal-commons-java_3.2.1-b003-1.1_all.deb ... 744s Unpacking libgmbal-commons-java (3.2.1-b003-1.1) ... 744s Selecting previously unselected package libgmbal-pfl-java. 744s Preparing to unpack .../128-libgmbal-pfl-java_4.0.1-b003-2_all.deb ... 744s Unpacking libgmbal-pfl-java (4.0.1-b003-2) ... 744s Selecting previously unselected package libgmbal-java. 744s Preparing to unpack .../129-libgmbal-java_4.0.0-b002-1.1_all.deb ... 744s Unpacking libgmbal-java (4.0.0-b002-1.1) ... 744s Selecting previously unselected package libargs4j-java. 744s Preparing to unpack .../130-libargs4j-java_2.33-2_all.deb ... 744s Unpacking libargs4j-java (2.33-2) ... 744s Selecting previously unselected package libjaxen-java. 744s Preparing to unpack .../131-libjaxen-java_1.1.6-5_all.deb ... 744s Unpacking libjaxen-java (1.1.6-5) ... 744s Selecting previously unselected package libdom4j-java. 744s Preparing to unpack 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.../137-libaopalliance-java_20070526-7_all.deb ... 744s Unpacking libaopalliance-java (20070526-7) ... 744s Selecting previously unselected package liberror-prone-java. 744s Preparing to unpack .../138-liberror-prone-java_2.18.0-1_all.deb ... 744s Unpacking liberror-prone-java (2.18.0-1) ... 744s Selecting previously unselected package libjsr305-java. 744s Preparing to unpack .../139-libjsr305-java_0.1~+svn49-11_all.deb ... 744s Unpacking libjsr305-java (0.1~+svn49-11) ... 744s Selecting previously unselected package libguava-java. 744s Preparing to unpack .../140-libguava-java_32.0.1-1_all.deb ... 744s Unpacking libguava-java (32.0.1-1) ... 744s Selecting previously unselected package libguice-java. 744s Preparing to unpack .../141-libguice-java_4.2.3-2_all.deb ... 744s Unpacking libguice-java (4.2.3-2) ... 744s Selecting previously unselected package libmaven-parent-java. 744s Preparing to unpack .../142-libmaven-parent-java_43-2_all.deb ... 744s Unpacking libmaven-parent-java (43-2) ... 744s Selecting previously unselected package libplexus-utils2-java. 744s Preparing to unpack .../143-libplexus-utils2-java_3.4.2-1_all.deb ... 744s Unpacking libplexus-utils2-java (3.4.2-1) ... 744s Selecting previously unselected package libwagon-provider-api-java. 744s Preparing to unpack .../144-libwagon-provider-api-java_3.5.3-1_all.deb ... 744s Unpacking libwagon-provider-api-java (3.5.3-1) ... 744s Selecting previously unselected package libmaven-resolver-java. 744s Preparing to unpack .../145-libmaven-resolver-java_1.6.3-1_all.deb ... 744s Unpacking libmaven-resolver-java (1.6.3-1) ... 745s Selecting previously unselected package libplexus-cipher-java. 745s Preparing to unpack .../146-libplexus-cipher-java_2.0-1_all.deb ... 745s Unpacking libplexus-cipher-java (2.0-1) ... 745s Selecting previously unselected package libplexus-classworlds-java. 745s Preparing to unpack .../147-libplexus-classworlds-java_2.7.0-1_all.deb ... 745s Unpacking libplexus-classworlds-java (2.7.0-1) 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Preparing to unpack .../152-libcdi-api-java_1.2-3_all.deb ... 745s Unpacking libcdi-api-java (1.2-3) ... 745s Selecting previously unselected package libslf4j-java. 745s Preparing to unpack .../153-libslf4j-java_1.7.32-1_all.deb ... 745s Unpacking libslf4j-java (1.7.32-1) ... 745s Selecting previously unselected package libsisu-inject-java. 745s Preparing to unpack .../154-libsisu-inject-java_0.3.4-2_all.deb ... 745s Unpacking libsisu-inject-java (0.3.4-2) ... 745s Selecting previously unselected package libsisu-plexus-java. 745s Preparing to unpack .../155-libsisu-plexus-java_0.3.4-3_all.deb ... 745s Unpacking libsisu-plexus-java (0.3.4-3) ... 745s Selecting previously unselected package libmaven3-core-java. 745s Preparing to unpack .../156-libmaven3-core-java_3.8.8-1_all.deb ... 745s Unpacking libmaven3-core-java (3.8.8-1) ... 745s Selecting previously unselected package libmaven-shared-io-java. 745s Preparing to unpack .../157-libmaven-shared-io-java_3.0.0-4_all.deb ... 745s Unpacking libmaven-shared-io-java (3.0.0-4) ... 745s Selecting previously unselected package libmaven-file-management-java. 745s Preparing to unpack .../158-libmaven-file-management-java_3.0.0-1_all.deb ... 745s Unpacking libmaven-file-management-java (3.0.0-1) ... 745s Selecting previously unselected package libcommons-compress-java. 745s Preparing to unpack .../159-libcommons-compress-java_1.25.0-1_all.deb ... 745s Unpacking libcommons-compress-java (1.25.0-1) ... 745s Selecting previously unselected package libplexus-io-java. 745s Preparing to unpack .../160-libplexus-io-java_3.3.1-2_all.deb ... 745s Unpacking libplexus-io-java (3.3.1-2) ... 745s Selecting previously unselected package libsnappy1v5:arm64. 745s Preparing to unpack .../161-libsnappy1v5_1.2.1-1_arm64.deb ... 745s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 745s Selecting previously unselected package libsnappy-jni. 745s Preparing to unpack .../162-libsnappy-jni_1.1.10.5-2_arm64.deb ... 745s Unpacking libsnappy-jni 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Preparing to unpack .../168-libhttpclient-java_4.5.14-1_all.deb ... 746s Unpacking libhttpclient-java (4.5.14-1) ... 746s Selecting previously unselected package libjsoup-java. 746s Preparing to unpack .../169-libjsoup-java_1.15.3-1_all.deb ... 746s Unpacking libjsoup-java (1.15.3-1) ... 746s Selecting previously unselected package libwagon-http-java. 746s Preparing to unpack .../170-libwagon-http-java_3.5.3-1_all.deb ... 746s Unpacking libwagon-http-java (3.5.3-1) ... 746s Selecting previously unselected package libistack-commons-java. 746s Preparing to unpack .../171-libistack-commons-java_3.0.6-5_all.deb ... 746s Unpacking libistack-commons-java (3.0.6-5) ... 746s Selecting previously unselected package libcodemodel-java. 746s Preparing to unpack .../172-libcodemodel-java_2.6+jaxb2.3.0.1-10.1_all.deb ... 746s Unpacking libcodemodel-java (2.6+jaxb2.3.0.1-10.1) ... 746s Selecting previously unselected package librngom-java. 746s Preparing to unpack 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libsaaj-java (1.4.0-4) ... 746s Selecting previously unselected package libjaxws-api-java. 746s Preparing to unpack .../179-libjaxws-api-java_2.3.0-1.1_all.deb ... 746s Unpacking libjaxws-api-java (2.3.0-1.1) ... 746s Selecting previously unselected package libjws-api-java. 746s Preparing to unpack .../180-libjws-api-java_1.1-2_all.deb ... 746s Unpacking libjws-api-java (1.1-2) ... 746s Selecting previously unselected package libknopflerfish-osgi-framework-java. 746s Preparing to unpack .../181-libknopflerfish-osgi-framework-java_6.1.1-3.1_all.deb ... 746s Unpacking libknopflerfish-osgi-framework-java (6.1.1-3.1) ... 746s Selecting previously unselected package libisorelax-java. 746s Preparing to unpack .../182-libisorelax-java_20041111-14_all.deb ... 746s Unpacking libisorelax-java (20041111-14) ... 746s Selecting previously unselected package libxml-commons-external-java. 746s Preparing to unpack .../183-libxml-commons-external-java_1.4.01-6_all.deb ... 746s Unpacking libxml-commons-external-java (1.4.01-6) ... 746s Selecting previously unselected package libxerces2-java. 746s Preparing to unpack .../184-libxerces2-java_2.12.2-1_all.deb ... 746s Unpacking libxerces2-java (2.12.2-1) ... 747s Selecting previously unselected package libmsv-java. 747s Preparing to unpack .../185-libmsv-java_2009.1+dfsg1-6_all.deb ... 747s Unpacking libmsv-java (2009.1+dfsg1-6) ... 747s Selecting previously unselected package libstax2-api-java. 747s Preparing to unpack .../186-libstax2-api-java_4.1-1_all.deb ... 747s Unpacking libstax2-api-java (4.1-1) ... 747s Selecting previously unselected package libwoodstox-java. 747s Preparing to unpack .../187-libwoodstox-java_1%3a6.2.1-1_all.deb ... 747s Unpacking libwoodstox-java (1:6.2.1-1) ... 747s Selecting previously unselected package libmetro-policy-java. 747s Preparing to unpack .../188-libmetro-policy-java_2.7.2-4_all.deb ... 747s Unpacking libmetro-policy-java (2.7.2-4) ... 747s Selecting previously unselected package libmimepull-java. 747s Preparing to unpack .../189-libmimepull-java_1.9.7-2_all.deb ... 747s Unpacking libmimepull-java (1.9.7-2) ... 747s Selecting previously unselected package libsaaj-ri-java. 747s Preparing to unpack .../190-libsaaj-ri-java_1.4.1-1.1_all.deb ... 747s Unpacking libsaaj-ri-java (1.4.1-1.1) ... 747s Selecting previously unselected package libjaxws-java. 747s Preparing to unpack .../191-libjaxws-java_2.3.0.2-2_all.deb ... 747s Unpacking libjaxws-java (2.3.0.2-2) ... 747s Selecting previously unselected package javahelp2. 747s Preparing to unpack .../192-javahelp2_2.0.05.ds1-10_all.deb ... 747s Unpacking javahelp2 (2.0.05.ds1-10) ... 747s Selecting previously unselected package libandroid-json-org-java. 747s Preparing to unpack .../193-libandroid-json-org-java_20121204-20090211-5_all.deb ... 747s Unpacking libandroid-json-org-java (20121204-20090211-5) ... 747s Selecting previously unselected package libapache-mime4j-java. 747s Preparing to unpack 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(2.10.1-1) ... 748s Selecting previously unselected package libciftools-java. 748s Preparing to unpack .../200-libciftools-java_6.0.0-1_all.deb ... 748s Unpacking libciftools-java (6.0.0-1) ... 748s Selecting previously unselected package libcommons-math-java. 748s Preparing to unpack .../201-libcommons-math-java_2.2-8_all.deb ... 748s Unpacking libcommons-math-java (2.2-8) ... 748s Selecting previously unselected package libitext5-java. 748s Preparing to unpack .../202-libitext5-java_5.5.13.3-4_all.deb ... 748s Unpacking libitext5-java (5.5.13.3-4) ... 748s Selecting previously unselected package libjackson2-annotations-java. 748s Preparing to unpack .../203-libjackson2-annotations-java_2.14.0-1_all.deb ... 748s Unpacking libjackson2-annotations-java (2.14.0-1) ... 748s Selecting previously unselected package libjackson2-core-java. 748s Preparing to unpack .../204-libjackson2-core-java_2.14.1-1_all.deb ... 748s Unpacking libjackson2-core-java (2.14.1-1) ... 748s Selecting previously unselected package libjackson2-databind-java. 748s Preparing to unpack .../205-libjackson2-databind-java_2.14.0-1_all.deb ... 748s Unpacking libjackson2-databind-java (2.14.0-1) ... 748s Selecting previously unselected package libantlr4-runtime-java. 748s Preparing to unpack .../206-libantlr4-runtime-java_4.9.2-2_all.deb ... 748s Unpacking libantlr4-runtime-java (4.9.2-2) ... 748s Selecting previously unselected package libapfloat-java. 748s Preparing to unpack .../207-libapfloat-java_1.13.0-1_all.deb ... 748s Unpacking libapfloat-java (1.13.0-1) ... 748s Selecting previously unselected package libmaven-archiver-java. 748s Preparing to unpack .../208-libmaven-archiver-java_3.6.2-1_all.deb ... 748s Unpacking libmaven-archiver-java (3.6.2-1) ... 748s Selecting previously unselected package libmaven-jar-plugin-java. 748s Preparing to unpack .../209-libmaven-jar-plugin-java_3.3.0-2_all.deb ... 748s Unpacking libmaven-jar-plugin-java (3.3.0-2) ... 748s Selecting previously unselected package libcommons-text-java. 748s Preparing to unpack .../210-libcommons-text-java_1.11.0-1_all.deb ... 748s Unpacking libcommons-text-java (1.11.0-1) ... 748s Selecting previously unselected package libfastutil-java. 748s Preparing to unpack .../211-libfastutil-java_8.5.14+dfsg-1_all.deb ... 748s Unpacking libfastutil-java (8.5.14+dfsg-1) ... 748s Selecting previously unselected package libjheaps-java. 748s Preparing to unpack .../212-libjheaps-java_0.14-2_all.deb ... 748s Unpacking libjheaps-java (0.14-2) ... 748s Selecting previously unselected package libjgraphx-java. 749s Preparing to unpack .../213-libjgraphx-java_2.1.0.7-4_all.deb ... 749s Unpacking libjgraphx-java (2.1.0.7-4) ... 749s Selecting previously unselected package libjgrapht-java. 749s Preparing to unpack .../214-libjgrapht-java_1.5.2-1_all.deb ... 749s Unpacking libjgrapht-java (1.5.2-1) ... 749s Selecting previously unselected package libinchi1. 749s Preparing to unpack .../215-libinchi1_1.03+dfsg-4build1_arm64.deb ... 749s Unpacking libinchi1 (1.03+dfsg-4build1) ... 749s Selecting previously unselected package libjni-inchi-jni. 749s Preparing to unpack .../216-libjni-inchi-jni_0.8+dfsg-7build1_arm64.deb ... 749s Unpacking libjni-inchi-jni (0.8+dfsg-7build1) ... 749s Selecting previously unselected package libcommons-exec-java. 749s Preparing to unpack .../217-libcommons-exec-java_1.3-2_all.deb ... 749s Unpacking libcommons-exec-java (1.3-2) ... 749s Selecting previously unselected package libexec-maven-plugin-java. 749s Preparing to unpack .../218-libexec-maven-plugin-java_3.1.0-2_all.deb ... 749s Unpacking libexec-maven-plugin-java (3.1.0-2) ... 749s Selecting previously unselected package libmaven-shared-incremental-java. 749s Preparing to unpack .../219-libmaven-shared-incremental-java_1.1-6_all.deb ... 749s Unpacking libmaven-shared-incremental-java (1.1-6) ... 749s Selecting previously unselected package libcommons-lang-java. 749s Preparing to unpack .../220-libcommons-lang-java_2.6-10_all.deb ... 749s Unpacking libcommons-lang-java (2.6-10) ... 749s Selecting previously unselected package libxbean-reflect-java. 749s Preparing to unpack .../221-libxbean-reflect-java_4.5-8_all.deb ... 749s Unpacking libxbean-reflect-java (4.5-8) ... 749s Selecting previously unselected package libplexus-container-default-java. 749s Preparing to unpack .../222-libplexus-container-default-java_2.1.1-1_all.deb ... 749s Unpacking libplexus-container-default-java (2.1.1-1) ... 749s Selecting previously unselected package libplexus-compiler-java. 749s Preparing to unpack .../223-libplexus-compiler-java_2.13.0-1_all.deb ... 749s Unpacking libplexus-compiler-java (2.13.0-1) ... 749s Selecting previously unselected package libqdox2-java. 749s Preparing to unpack .../224-libqdox2-java_2.0.3-1_all.deb ... 749s Unpacking libqdox2-java (2.0.3-1) ... 749s Selecting previously unselected package libplexus-languages-java. 749s Preparing to unpack .../225-libplexus-languages-java_1.1.1-2_all.deb ... 749s Unpacking libplexus-languages-java (1.1.1-2) ... 749s Selecting previously unselected package libmaven-compiler-plugin-java. 749s Preparing to unpack .../226-libmaven-compiler-plugin-java_3.10.1-2_all.deb ... 749s Unpacking libmaven-compiler-plugin-java (3.10.1-2) ... 749s Selecting previously unselected package liblog4j1.2-java. 749s Preparing to unpack .../227-liblog4j1.2-java_1.2.17-11_all.deb ... 749s Unpacking liblog4j1.2-java (1.2.17-11) ... 749s Selecting previously unselected package libjni-inchi-java. 749s Preparing to unpack .../228-libjni-inchi-java_0.8+dfsg-7build1_all.deb ... 749s Unpacking libjni-inchi-java (0.8+dfsg-7build1) ... 749s Selecting previously unselected package libnaga-java. 749s Preparing to unpack .../229-libnaga-java_3.0+svn80-5_all.deb ... 749s Unpacking libnaga-java (3.0+svn80-5) ... 749s Selecting previously unselected package libjmol-java. 749s Preparing to unpack .../230-libjmol-java_16.2.15+dfsg-1_all.deb ... 749s Unpacking libjmol-java (16.2.15+dfsg-1) ... 749s Selecting previously unselected package libjson-simple-java. 749s Preparing to unpack .../231-libjson-simple-java_2.3.0-1_all.deb ... 749s Unpacking libjson-simple-java (2.3.0-1) ... 749s Selecting previously unselected package libmsgpack-java. 750s Preparing to unpack .../232-libmsgpack-java_0.9.6-1_all.deb ... 750s Unpacking libmsgpack-java (0.9.6-1) ... 750s Selecting previously unselected package libmmtf-java. 750s Preparing to unpack .../233-libmmtf-java_1.0.11-1_all.deb ... 750s Unpacking libmmtf-java (1.0.11-1) ... 750s Selecting previously unselected package libvecmath-java. 750s Preparing to unpack .../234-libvecmath-java_1.5.2-7_all.deb ... 750s Unpacking libvecmath-java (1.5.2-7) ... 750s Selecting previously unselected package libbiojava6-java. 750s Preparing to unpack .../235-libbiojava6-java_6.1.0+dfsg-4_all.deb ... 750s Unpacking libbiojava6-java (6.1.0+dfsg-4) ... 750s Selecting previously unselected package libcommons-jexl2-java. 750s Preparing to unpack .../236-libcommons-jexl2-java_2.1.1-6_all.deb ... 750s Unpacking libcommons-jexl2-java (2.1.1-6) ... 750s Selecting previously unselected package libmjson-java. 750s Preparing to unpack .../237-libmjson-java_1.4.0-3_all.deb ... 750s Unpacking libmjson-java (1.4.0-3) ... 750s Selecting previously unselected package libmbedcrypto7t64:arm64. 750s Preparing to unpack .../238-libmbedcrypto7t64_2.28.8-1_arm64.deb ... 750s Unpacking libmbedcrypto7t64:arm64 (2.28.8-1) ... 750s Selecting previously unselected package libmbedx509-1t64:arm64. 750s Preparing to unpack .../239-libmbedx509-1t64_2.28.8-1_arm64.deb ... 750s Unpacking libmbedx509-1t64:arm64 (2.28.8-1) ... 750s Selecting previously unselected package libmbedtls14t64:arm64. 750s Preparing to unpack .../240-libmbedtls14t64_2.28.8-1_arm64.deb ... 750s Unpacking libmbedtls14t64:arm64 (2.28.8-1) ... 750s Selecting previously unselected package ncbi-vdb-data. 750s Preparing to unpack .../241-ncbi-vdb-data_3.0.2+dfsg-2build2_all.deb ... 750s Unpacking ncbi-vdb-data (3.0.2+dfsg-2build2) ... 750s Selecting previously unselected package libncbi-vdb3:arm64. 750s Preparing to unpack .../242-libncbi-vdb3_3.0.2+dfsg-2build2_arm64.deb ... 750s Unpacking libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 750s Selecting previously unselected package libncbi-ngs3:arm64. 750s Preparing to unpack .../243-libncbi-ngs3_3.0.3+dfsg-9ubuntu1_arm64.deb ... 750s Unpacking libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 750s Selecting previously unselected package libngs-jni:arm64. 750s Preparing to unpack .../244-libngs-jni_3.0.3+dfsg-9ubuntu1_arm64.deb ... 750s Unpacking libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 750s Selecting previously unselected package libngs-java:arm64. 750s Preparing to unpack .../245-libngs-java_3.0.3+dfsg-9ubuntu1_arm64.deb ... 750s Unpacking libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 750s Selecting previously unselected package librhino-java. 750s Preparing to unpack .../246-librhino-java_1.7.15-1_all.deb ... 750s Unpacking librhino-java (1.7.15-1) ... 750s Selecting previously unselected package libhtsjdk-java. 750s Preparing to unpack .../247-libhtsjdk-java_4.1.0+dfsg-2_all.deb ... 750s Unpacking libhtsjdk-java (4.1.0+dfsg-2) ... 750s Selecting previously unselected package libhttpmime-java. 750s Preparing to unpack .../248-libhttpmime-java_4.5.14-1_all.deb ... 750s Unpacking libhttpmime-java (4.5.14-1) ... 750s Selecting previously unselected package libintervalstorej-java. 750s Preparing to unpack .../249-libintervalstorej-java_1.2+dfsg-5_all.deb ... 750s Unpacking libintervalstorej-java (1.2+dfsg-5) ... 751s Selecting previously unselected package libjaba-client-java. 751s Preparing to unpack .../250-libjaba-client-java_2.2.0-2_all.deb ... 751s Unpacking libjaba-client-java (2.2.0-2) ... 751s Selecting previously unselected package libjaxrs-api-java. 751s Preparing to unpack .../251-libjaxrs-api-java_2.1.2-2_all.deb ... 751s Unpacking libjaxrs-api-java (2.1.2-2) ... 751s Selecting previously unselected package libjsr311-api-java. 751s Preparing to unpack .../252-libjsr311-api-java_1.1.1-1.1_all.deb ... 751s Unpacking libjsr311-api-java (1.1.1-1.1) ... 751s Selecting previously unselected package libjersey1-core-java. 751s Preparing to unpack .../253-libjersey1-core-java_1.19.3-8_all.deb ... 751s Unpacking libjersey1-core-java (1.19.3-8) ... 751s Selecting previously unselected package libjersey1-client-java. 751s Preparing to unpack .../254-libjersey1-client-java_1.19.3-8_all.deb ... 751s Unpacking libjersey1-client-java (1.19.3-8) ... 751s Selecting previously unselected package libel-api-java. 751s Preparing to unpack .../255-libel-api-java_3.0.0-3_all.deb ... 751s Unpacking libel-api-java (3.0.0-3) ... 751s Selecting previously unselected package libwebsocket-api-java. 751s Preparing to unpack .../256-libwebsocket-api-java_1.1-2_all.deb ... 751s Unpacking libwebsocket-api-java (1.1-2) ... 751s Selecting previously unselected package libjetty9-java. 751s Preparing to unpack .../257-libjetty9-java_9.4.55-1_all.deb ... 751s Unpacking libjetty9-java (9.4.55-1) ... 751s Selecting previously unselected package libjfreesvg-java. 751s Preparing to unpack .../258-libjfreesvg-java_4.1-2_all.deb ... 751s Unpacking libjfreesvg-java (4.1-2) ... 751s Selecting previously unselected package libjswingreader-java. 751s Preparing to unpack .../259-libjswingreader-java_0.3-4_all.deb ... 751s Unpacking libjswingreader-java (0.3-4) ... 751s Selecting previously unselected package liblightcouch-java. 751s Preparing to unpack .../260-liblightcouch-java_0.2.0-1_all.deb ... 751s Unpacking liblightcouch-java (0.2.0-1) ... 751s Selecting previously unselected package libmongodb-java. 751s Preparing to unpack .../261-libmongodb-java_3.6.3-2_all.deb ... 751s Unpacking libmongodb-java (3.6.3-2) ... 751s Selecting previously unselected package liblog4j2-java. 751s Preparing to unpack .../262-liblog4j2-java_2.19.0-2_all.deb ... 751s Unpacking liblog4j2-java (2.19.0-2) ... 752s Selecting previously unselected package libmiglayout-java. 752s Preparing to unpack .../263-libmiglayout-java_11.1+ds-1_all.deb ... 752s Unpacking libmiglayout-java (11.1+ds-1) ... 752s Selecting previously unselected package libcastor-core-java. 752s Preparing to unpack .../264-libcastor-core-java_1.3.2-7_all.deb ... 752s Unpacking libcastor-core-java (1.3.2-7) ... 752s Selecting previously unselected package libcastor-xml-java. 752s Preparing to unpack .../265-libcastor-xml-java_1.3.2-7_all.deb ... 752s Unpacking libcastor-xml-java (1.3.2-7) ... 752s Selecting previously unselected package libvamsas-client-java. 752s Preparing to unpack .../266-libvamsas-client-java_0.2+dfsg-2_all.deb ... 752s Unpacking libvamsas-client-java (0.2+dfsg-2) ... 752s Selecting previously unselected package varna. 752s Preparing to unpack .../267-varna_3-93+ds-6_all.deb ... 752s Unpacking varna (3-93+ds-6) ... 752s Selecting previously unselected package jalview. 752s Preparing to unpack .../268-jalview_2.11.3.1+dfsg-1_all.deb ... 752s Unpacking jalview (2.11.3.1+dfsg-1) ... 752s Selecting previously unselected package autopkgtest-satdep. 752s Preparing to unpack .../269-5-autopkgtest-satdep.deb ... 752s Unpacking autopkgtest-satdep (0) ... 752s Setting up libgmbal-commons-java (3.2.1-b003-1.1) ... 752s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 752s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ... 752s Setting up liblcms2-2:arm64 (2.14-2build1) ... 752s Setting up libpixman-1-0:arm64 (0.42.2-1build1) ... 752s Setting up libfastutil-java (8.5.14+dfsg-1) ... 752s Setting up libjackson2-annotations-java (2.14.0-1) ... 752s Setting up libdtd-parser-java (1.2-1) ... 752s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 752s Setting up libjaxrs-api-java (2.1.2-2) ... 752s Setting up libwayland-server0:arm64 (1.23.0-1) ... 752s Setting up libknopflerfish-osgi-framework-java (6.1.1-3.1) ... 752s Setting up libx11-xcb1:arm64 (2:1.8.7-1build1) ... 752s Setting up libslf4j-java (1.7.32-1) ... 752s Setting up libplexus-utils2-java (3.4.2-1) ... 752s Setting up libmiglayout-java (11.1+ds-1) ... 752s Setting up libplexus-classworlds-java (2.7.0-1) ... 752s Setting up libqdox-java (1.12.1-4) ... 752s Setting up libxdamage1:arm64 (1:1.1.6-1build1) ... 752s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ... 752s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 752s Setting up libjsr305-java (0.1~+svn49-11) ... 752s Setting up libjws-api-java (1.1-2) ... 752s Setting up hicolor-icon-theme (0.18-1) ... 752s Setting up libxi6:arm64 (2:1.8.2-1) ... 752s Setting up libmbedcrypto7t64:arm64 (2.28.8-1) ... 752s Setting up java-common (0.76) ... 752s Setting up libgmbal-pfl-java (4.0.1-b003-2) ... 752s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 752s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 752s Setting up libqdox2-java (2.0.3-1) ... 752s Setting up libaopalliance-java (20070526-7) ... 752s Setting up libcommons-cli-java (1.6.0-1) ... 752s Setting up libjheaps-java (0.14-2) ... 752s Setting up libcommons-exec-java (1.3-2) ... 752s Setting up libvecmath-java (1.5.2-7) ... 752s Setting up libxcb-render0:arm64 (1.17.0-2) ... 752s Setting up libdrm-radeon1:arm64 (2.4.122-1) ... 752s Setting up libglvnd0:arm64 (1.7.0-1build1) ... 752s Setting up libgoogle-gson-java (2.10.1-1) ... 752s Setting up libjsr311-api-java (1.1.1-1.1) ... 752s Setting up libmjson-java (1.4.0-3) ... 752s Setting up libxcb-glx0:arm64 (1.17.0-2) ... 752s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 752s Setting up libasm-java (9.7-2) ... 752s Setting up x11-common (1:7.7+23ubuntu3) ... 752s Setting up libdeflate0:arm64 (1.21-1) ... 752s Setting up liblog4j1.2-java (1.2.17-11) ... 752s Setting up libel-api-java (3.0.0-3) ... 752s Setting up libplexus-component-annotations-java (2.1.1-1) ... 752s Setting up libantlr4-runtime-java (4.9.2-2) ... 752s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 752s Setting up libjson-simple-java (2.3.0-1) ... 752s Setting up libwsdl4j-java (1.6.3-4.1) ... 752s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 752s Setting up libcolord2:arm64 (1.4.7-1build2) ... 752s Setting up libxxf86vm1:arm64 (1:1.1.4-1build4) ... 752s Setting up libstax2-api-java (4.1-1) ... 752s Setting up libsnappy1v5:arm64 (1.2.1-1) ... 752s Setting up libexec-maven-plugin-java (3.1.0-2) ... 752s Setting up libxcb-present0:arm64 (1.17.0-2) ... 752s Setting up libdconf1:arm64 (0.40.0-4build2) ... 752s Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ... 752s Setting up libgeronimo-interceptor-3.0-spec-java (1.0.1-4fakesync) ... 752s Setting up libasound2-data (1.2.12-1) ... 752s Setting up libandroid-json-org-java (20121204-20090211-5) ... 752s Setting up librhino-java (1.7.15-1) ... 752s Setting up libbsf-java (1:2.4.0-8) ... 752s Setting up libjersey1-core-java (1.19.3-8) ... 752s Setting up libasound2t64:arm64 (1.2.12-1) ... 752s Setting up libjaxen-java (1.1.6-5) ... 752s Setting up libepoxy0:arm64 (1.5.10-1build1) ... 752s Setting up libxfixes3:arm64 (1:6.0.0-2build1) ... 752s Setting up libxcb-sync1:arm64 (1.17.0-2) ... 752s Setting up libjansi-java (2.4.1-2) ... 752s Setting up libapache-pom-java (33-2) ... 752s Setting up libavahi-common-data:arm64 (0.8-13ubuntu6) ... 752s Setting up libxpp3-java (1.1.4c-3) ... 752s Setting up libatinject-jsr330-api-java (1.0+ds1-5) ... 752s Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... 752s Setting up libwebsocket-api-java (1.1-2) ... 752s Setting up libxinerama1:arm64 (2:1.1.4-3build1) ... 752s Setting up libplexus-interpolation-java (1.26-1) ... 752s Setting up fonts-dejavu-mono (2.37-8) ... 752s Setting up libitext5-java (5.5.13.3-4) ... 752s Setting up libxml-commons-resolver1.1-java (1.2-11) ... 752s Setting up libxz-java (1.9-1) ... 752s Setting up libxrandr2:arm64 (2:1.5.4-1) ... 752s Setting up fonts-dejavu-core (2.37-8) ... 752s Setting up libpcsclite1:arm64 (2.3.0-1) ... 752s Setting up libintervalstorej-java (1.2+dfsg-5) ... 752s Setting up libmongodb-java (3.6.3-2) ... 752s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 752s Setting up libisorelax-java (20041111-14) ... 752s Setting up libactivation-java (1.2.0-2) ... 752s Setting up libhamcrest-java (2.2-2) ... 752s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 752s Setting up libjsp-api-java (2.3.4-3) ... 752s Setting up libvulkan1:arm64 (1.3.290.0-1) ... 752s Setting up libmimepull-java (1.9.7-2) ... 752s Setting up libapfloat-java (1.13.0-1) ... 752s Setting up libwebp7:arm64 (1.4.0-0.1) ... 752s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ... 752s Setting up libgif7:arm64 (5.2.2-1ubuntu1) ... 752s Setting up libjfreesvg-java (4.1-2) ... 752s Setting up libxshmfence1:arm64 (1.3-1build5) ... 752s Setting up libjsoup-java (1.15.3-1) ... 752s Setting up libmail-java (1.6.5-2) ... 752s Setting up at-spi2-common (2.54.0-1) ... 752s Setting up libcommons-math-java (2.2-8) ... 752s Setting up libxcb-randr0:arm64 (1.17.0-2) ... 752s Setting up libxml-commons-external-java (1.4.01-6) ... 752s Setting up libxbean-reflect-java (4.5-8) ... 752s Setting up libservlet-api-java (4.0.1-2) ... 752s Setting up libjackson2-core-java (2.14.1-1) ... 752s Setting up libharfbuzz0b:arm64 (9.0.0-1) ... 752s Setting up ncbi-vdb-data (3.0.2+dfsg-2build2) ... 752s Setting up libthai-data (0.1.29-2build1) ... 752s Setting up libwayland-egl1:arm64 (1.23.0-1) ... 752s Setting up libhttpcore-java (4.4.16-1) ... 752s Setting up ca-certificates-java (20240118) ... 752s No JRE found. Skipping Java certificates setup. 752s Setting up libxerces2-java (2.12.2-1) ... 752s Setting up libgmbal-java (4.0.0-b002-1.1) ... 752s Setting up librelaxng-datatype-java (1.0+ds1-3.1) ... 752s Setting up libantlr-java (2.7.7+dfsg-14) ... 752s Setting up libcdi-api-java (1.2-3) ... 752s Setting up libsnappy-jni (1.1.10.5-2) ... 752s Setting up libxcomposite1:arm64 (1:0.4.5-1build3) ... 752s Setting up libhawtjni-runtime-java (1.18-1) ... 752s Setting up libargs4j-java (2.33-2) ... 752s Setting up libinchi1 (1.03+dfsg-4build1) ... 752s Setting up libsaaj-java (1.4.0-4) ... 752s Setting up libdrm-amdgpu1:arm64 (2.4.122-1) ... 752s Setting up libnaga-java (3.0+svn80-5) ... 752s Setting up libwayland-client0:arm64 (1.23.0-1) ... 752s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 752s Setting up libdom4j-java (2.1.4-1) ... 752s Setting up libjaxb-api-java (2.3.1-1) ... 752s Setting up libwagon-provider-api-java (3.5.3-1) ... 752s Setting up mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 752s Setting up libxstream-java (1.4.20-1) ... 752s Setting up libmbedx509-1t64:arm64 (2.28.8-1) ... 752s Setting up libjetty9-java (9.4.55-1) ... 752s Setting up libatk1.0-0t64:arm64 (2.54.0-1) ... 753s Setting up openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 753s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode 753s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 753s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 753s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 753s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 753s Setting up libjersey1-client-java (1.19.3-8) ... 753s Setting up libplexus-languages-java (1.1.1-2) ... 753s Setting up libgbm1:arm64 (24.2.3-1ubuntu1) ... 753s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 753s Setting up libstax-ex-java (1.7.8-3) ... 753s Setting up libxtst6:arm64 (2:1.2.3-1.1build1) ... 753s Setting up libxcursor1:arm64 (1:1.2.2-1) ... 753s Setting up libmaven-parent-java (43-2) ... 753s Setting up libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 753s Setting up libcommons-parent-java (56-1) ... 753s Setting up libavahi-common3:arm64 (0.8-13ubuntu6) ... 753s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 753s Setting up libsisu-inject-java (0.3.4-2) ... 753s Setting up dconf-service (0.40.0-4build2) ... 753s Setting up libciftools-java (6.0.0-1) ... 753s Setting up libjaxws-api-java (2.3.0-1.1) ... 753s Setting up libcommons-lang-java (2.6-10) ... 753s Setting up libjackson2-databind-java (2.14.0-1) ... 753s Setting up libplexus-cipher-java (2.0-1) ... 753s Setting up libcastor-core-java (1.3.2-7) ... 753s Setting up libcommons-jexl2-java (2.1.1-6) ... 753s Setting up libthai0:arm64 (0.1.29-2build1) ... 753s Setting up libsisu-plexus-java (0.3.4-3) ... 753s Setting up libcastor-xml-java (1.3.2-7) ... 753s Setting up libstreambuffer-java (1.5.4-1.1) ... 753s Setting up libjswingreader-java (0.3-4) ... 753s Setting up libcommons-discovery-java (0.5-4) ... 753s Setting up libcommons-lang3-java (3.14.0-1) ... 753s Setting up librngom-java (2.3.0.1-10.1) ... 753s Setting up libjni-inchi-jni (0.8+dfsg-7build1) ... 753s Setting up libjansi-native-java (1.8-2) ... 753s Setting up libjgraphx-java (2.1.0.7-4) ... 753s Setting up libmbedtls14t64:arm64 (2.28.8-1) ... 753s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 753s Setting up libwayland-cursor0:arm64 (1.23.0-1) ... 753s Setting up libjansi1-java (1.18-3ubuntu1) ... 753s Setting up libplexus-sec-dispatcher-java (2.0-3) ... 753s Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 753s Setting up libsnappy-java (1.1.10.5-2) ... 753s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 753s Setting up libxsom-java (2.3.0.1-10.1) ... 753s Setting up libcommons-codec-java (1.16.0-1) ... 753s Setting up libjline2-java (2.14.6-5) ... 753s Setting up libavahi-client3:arm64 (0.8-13ubuntu6) ... 753s Setting up libsaaj-ri-java (1.4.1-1.1) ... 753s Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 753s Setting up gtk-update-icon-cache (4.16.2+ds-2) ... 753s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 755s Regenerating fonts cache... done. 755s Setting up libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 755s Setting up libglx0:arm64 (1.7.0-1build1) ... 755s Setting up dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 755s Setting up libcommons-compress-java (1.25.0-1) ... 755s Setting up libcommons-io-java (2.16.1-1) ... 755s Setting up libpango-1.0-0:arm64 (1.54.0+ds-2) ... 755s Setting up libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 755s Setting up libvamsas-client-java (0.2+dfsg-2) ... 755s Setting up libcairo2:arm64 (1.18.2-2) ... 755s Setting up libmaven-resolver-java (1.6.3-1) ... 755s Setting up libgl1:arm64 (1.7.0-1build1) ... 755s Setting up libcommons-httpclient-java (3.1-16) ... 755s Setting up libaxis-java (1.4-29) ... 755s Setting up libhttpclient-java (4.5.14-1) ... 755s Setting up liblightcouch-java (0.2.0-1) ... 755s Setting up libwagon-http-java (3.5.3-1) ... 755s Setting up libcairo-gobject2:arm64 (1.18.2-2) ... 755s Setting up libmaven-shared-utils-java (3.3.4-1) ... 755s Setting up libfastinfoset-java (1.2.12-3) ... 755s Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 755s Setting up libapache-mime4j-java (0.8.11-1) ... 755s Setting up libcups2t64:arm64 (2.4.10-1ubuntu2) ... 755s Setting up libgtk-3-common (3.24.43-3ubuntu2) ... 755s Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 755s Setting up libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 755s Setting up libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 755s Setting up libplexus-io-java (3.3.1-2) ... 755s Setting up liblog4j2-java (2.19.0-2) ... 755s Setting up libhttpmime-java (4.5.14-1) ... 755s Setting up libplexus-archiver-java (4.6.1-1) ... 755s Setting up libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 755s Setting up libhtsjdk-java (4.1.0+dfsg-2) ... 755s Setting up libmaven-archiver-java (3.6.2-1) ... 755s Setting up adwaita-icon-theme (47.0-1) ... 755s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 755s Setting up liberror-prone-java (2.18.0-1) ... 755s Setting up humanity-icon-theme (0.6.16) ... 755s Setting up libguava-java (32.0.1-1) ... 755s Setting up libplexus-container-default-java (2.1.1-1) ... 755s Setting up ubuntu-mono (24.04-0ubuntu1) ... 755s Setting up libguice-java (4.2.3-2) ... 755s Setting up libmaven3-core-java (3.8.8-1) ... 755s Setting up libmaven-shared-incremental-java (1.1-6) ... 755s Setting up libmaven-shared-io-java (3.0.0-4) ... 755s Setting up libplexus-compiler-java (2.13.0-1) ... 755s Setting up libmaven-compiler-plugin-java (3.10.1-2) ... 755s Setting up libjni-inchi-java (0.8+dfsg-7build1) ... 755s Setting up libmaven-file-management-java (3.0.0-1) ... 755s Setting up libjmol-java (16.2.15+dfsg-1) ... 755s Setting up libmaven-jar-plugin-java (3.3.0-2) ... 755s Setting up libcommons-text-java (1.11.0-1) ... 755s Setting up libmsgpack-java (0.9.6-1) ... 755s Setting up libmmtf-java (1.0.11-1) ... 755s Setting up libjgrapht-java (1.5.2-1) ... 755s Processing triggers for libc-bin (2.40-1ubuntu3) ... 755s Processing triggers for man-db (2.12.1-3) ... 756s Processing triggers for libglib2.0-0t64:arm64 (2.82.1-0ubuntu1) ... 756s Setting up libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 756s Processing triggers for shared-mime-info (2.4-5) ... 757s Processing triggers for ca-certificates-java (20240118) ... 757s Adding debian:ACCVRAIZ1.pem 757s Adding debian:AC_RAIZ_FNMT-RCM.pem 757s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 757s Adding debian:ANF_Secure_Server_Root_CA.pem 757s Adding debian:Actalis_Authentication_Root_CA.pem 757s Adding debian:AffirmTrust_Commercial.pem 757s Adding debian:AffirmTrust_Networking.pem 757s Adding debian:AffirmTrust_Premium.pem 757s Adding debian:AffirmTrust_Premium_ECC.pem 757s Adding debian:Amazon_Root_CA_1.pem 757s Adding debian:Amazon_Root_CA_2.pem 757s Adding debian:Amazon_Root_CA_3.pem 757s Adding debian:Amazon_Root_CA_4.pem 757s Adding debian:Atos_TrustedRoot_2011.pem 757s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 757s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 757s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 757s Adding debian:BJCA_Global_Root_CA1.pem 757s Adding debian:BJCA_Global_Root_CA2.pem 757s Adding debian:Baltimore_CyberTrust_Root.pem 757s Adding debian:Buypass_Class_2_Root_CA.pem 757s Adding debian:Buypass_Class_3_Root_CA.pem 757s Adding debian:CA_Disig_Root_R2.pem 757s Adding debian:CFCA_EV_ROOT.pem 757s Adding debian:COMODO_Certification_Authority.pem 757s Adding debian:COMODO_ECC_Certification_Authority.pem 757s Adding debian:COMODO_RSA_Certification_Authority.pem 757s Adding debian:Certainly_Root_E1.pem 757s Adding debian:Certainly_Root_R1.pem 757s Adding debian:Certigna.pem 757s Adding debian:Certigna_Root_CA.pem 757s Adding debian:Certum_EC-384_CA.pem 757s Adding debian:Certum_Trusted_Network_CA.pem 757s Adding debian:Certum_Trusted_Network_CA_2.pem 757s Adding debian:Certum_Trusted_Root_CA.pem 757s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 757s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 757s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 757s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 757s Adding debian:Comodo_AAA_Services_root.pem 757s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 757s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 757s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 757s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 757s Adding debian:DigiCert_Assured_ID_Root_CA.pem 757s Adding debian:DigiCert_Assured_ID_Root_G2.pem 757s Adding debian:DigiCert_Assured_ID_Root_G3.pem 757s Adding debian:DigiCert_Global_Root_CA.pem 757s Adding debian:DigiCert_Global_Root_G2.pem 757s Adding debian:DigiCert_Global_Root_G3.pem 757s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 757s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 757s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 757s Adding debian:DigiCert_Trusted_Root_G4.pem 757s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 757s Adding debian:Entrust_Root_Certification_Authority.pem 757s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 757s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 757s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 757s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 757s Adding debian:GLOBALTRUST_2020.pem 757s Adding debian:GTS_Root_R1.pem 757s Adding debian:GTS_Root_R2.pem 757s Adding debian:GTS_Root_R3.pem 757s Adding debian:GTS_Root_R4.pem 757s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 757s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 757s Adding debian:GlobalSign_Root_CA.pem 757s Adding debian:GlobalSign_Root_CA_-_R3.pem 757s Adding debian:GlobalSign_Root_CA_-_R6.pem 757s Adding debian:GlobalSign_Root_E46.pem 757s Adding debian:GlobalSign_Root_R46.pem 757s Adding debian:Go_Daddy_Class_2_CA.pem 757s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 757s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 757s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 757s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 757s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 757s Adding debian:HiPKI_Root_CA_-_G1.pem 757s Adding debian:Hongkong_Post_Root_CA_3.pem 757s Adding debian:ISRG_Root_X1.pem 757s Adding debian:ISRG_Root_X2.pem 757s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 757s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 757s Adding debian:Izenpe.com.pem 757s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 757s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 757s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 757s Adding debian:NAVER_Global_Root_Certification_Authority.pem 757s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 757s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 757s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 757s Adding debian:QuoVadis_Root_CA_1_G3.pem 757s Adding debian:QuoVadis_Root_CA_2.pem 757s Adding debian:QuoVadis_Root_CA_2_G3.pem 757s Adding debian:QuoVadis_Root_CA_3.pem 757s Adding debian:QuoVadis_Root_CA_3_G3.pem 757s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 757s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 757s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 758s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 758s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 758s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 758s Adding debian:SZAFIR_ROOT_CA2.pem 758s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 758s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 758s Adding debian:SecureSign_RootCA11.pem 758s Adding debian:SecureTrust_CA.pem 758s Adding debian:Secure_Global_CA.pem 758s Adding debian:Security_Communication_ECC_RootCA1.pem 758s Adding debian:Security_Communication_RootCA2.pem 758s Adding debian:Security_Communication_RootCA3.pem 758s Adding debian:Security_Communication_Root_CA.pem 758s Adding debian:Starfield_Class_2_CA.pem 758s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 758s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 758s Adding debian:SwissSign_Gold_CA_-_G2.pem 758s Adding debian:SwissSign_Silver_CA_-_G2.pem 758s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 758s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 758s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 758s Adding debian:TWCA_Global_Root_CA.pem 758s Adding debian:TWCA_Root_Certification_Authority.pem 758s Adding debian:TeliaSonera_Root_CA_v1.pem 758s Adding debian:Telia_Root_CA_v2.pem 758s Adding debian:TrustAsia_Global_Root_CA_G3.pem 758s Adding debian:TrustAsia_Global_Root_CA_G4.pem 758s Adding debian:Trustwave_Global_Certification_Authority.pem 758s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 758s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 758s Adding debian:TunTrust_Root_CA.pem 758s Adding debian:UCA_Extended_Validation_Root.pem 758s Adding debian:UCA_Global_G2_Root.pem 758s Adding debian:USERTrust_ECC_Certification_Authority.pem 758s Adding debian:USERTrust_RSA_Certification_Authority.pem 758s Adding debian:XRamp_Global_CA_Root.pem 758s Adding debian:certSIGN_ROOT_CA.pem 758s Adding debian:certSIGN_Root_CA_G2.pem 758s Adding debian:e-Szigno_Root_CA_2017.pem 758s Adding debian:ePKI_Root_Certification_Authority.pem 758s Adding debian:emSign_ECC_Root_CA_-_C3.pem 758s Adding debian:emSign_ECC_Root_CA_-_G3.pem 758s Adding debian:emSign_Root_CA_-_C1.pem 758s Adding debian:emSign_Root_CA_-_G1.pem 758s Adding debian:vTrus_ECC_Root_CA.pem 758s Adding debian:vTrus_Root_CA.pem 758s done. 758s Setting up ant (1.10.14-1) ... 758s Setting up libmsv-java (2009.1+dfsg1-6) ... 758s Setting up junit4 (4.13.2-4) ... 758s Setting up default-jre-headless (2:1.21-76) ... 758s Setting up ant-optional (1.10.14-1) ... 758s Setting up libwoodstox-java (1:6.2.1-1) ... 758s Setting up antlr (2.7.7+dfsg-14) ... 758s Setting up openjdk-21-jre:arm64 (21.0.5+11-1) ... 758s Setting up ivy (2.5.2-1) ... 758s Setting up javahelp2 (2.0.05.ds1-10) ... 758s Setting up groovy (2.4.21-10) ... 758s update-alternatives: using /usr/share/groovy/bin/groovy to provide /usr/bin/groovy (groovy) in auto mode 758s update-alternatives: using /usr/share/groovy/bin/groovyc to provide /usr/bin/groovyc (groovyc) in auto mode 758s update-alternatives: using /usr/share/groovy/bin/grape to provide /usr/bin/grape (grape) in auto mode 758s update-alternatives: using /usr/share/groovy/bin/startGroovy to provide /usr/bin/startGroovy (startGroovy) in auto mode 758s update-alternatives: using /usr/share/groovy/bin/groovysh to provide /usr/bin/groovysh (groovysh) in auto mode 758s update-alternatives: using /usr/share/groovy/bin/java2groovy to provide /usr/bin/java2groovy (java2groovy) in auto mode 758s update-alternatives: using /usr/share/groovy/bin/groovyConsole to provide /usr/bin/groovyConsole (groovyConsole) in auto mode 758s update-alternatives: using /usr/share/groovy/bin/groovydoc to provide /usr/bin/groovydoc (groovydoc) in auto mode 758s Setting up libistack-commons-java (3.0.6-5) ... 758s Setting up default-jre (2:1.21-76) ... 758s Setting up libcodemodel-java (2.6+jaxb2.3.0.1-10.1) ... 758s Setting up libtxw2-java (2.3.0.1-10.1) ... 758s Setting up libjaxb-java (2.3.0.1-10.1) ... 758s Setting up libmetro-policy-java (2.7.2-4) ... 758s Setting up varna (3-93+ds-6) ... 758s Setting up libbiojava6-java (6.1.0+dfsg-4) ... 758s Setting up libjaba-client-java (2.2.0-2) ... 758s Setting up libjaxws-java (2.3.0.2-2) ... 758s Setting up jalview (2.11.3.1+dfsg-1) ... 758s Setting up autopkgtest-satdep (0) ... 758s Processing triggers for libc-bin (2.40-1ubuntu3) ... 772s (Reading database ... 98807 files and directories currently installed.) 772s Removing autopkgtest-satdep (0) ... 778s autopkgtest [19:16:39]: test jalview-run-unit-test: [----------------------- 778s Could not obtain JAVA_COMPILE_VERSION for comparison 778s Could not make Java version check 778s Cannot get screen resolution: 778s No X11 DISPLAY variable was set, 778s or no headful library support was found, 778s but this program performed an operation which requires it, 778s 778s Cannot get screen size height and width: 778s No X11 DISPLAY variable was set, 778s or no headful library support was found, 778s but this program performed an operation which requires it, 778s 778s MemorySetting Property 'jvmmempc' (null) too large. Leaving free space for OS and reducing to (3552567296). 779s Java version: 21.0.5 779s Java home: /usr/lib/jvm/java-21-openjdk-arm64 779s Java arch: aarch64 Linux 6.11.0-8-generic 779s Using default properties file '/home/ubuntu/.jalview_nonrelease_properties' 779s Falling back to properties file '/home/ubuntu/.jalview_properties' 779s Jalview non-release version: 2.11.3.1+dfsg-1 (deb) 779s Setting initial log level to INFO 780s SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". 780s SLF4J: Defaulting to no-operation (NOP) logger implementation 780s SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. 780s INFO - Loaded Sequence Ontology from so-xp-simple.obo.zip (183ms) 780s INFO - Getting messages for lang: en 780s WARN - It looks like you are using old command line arguments. These are now deprecated and will be removed in a future release of Jalview. Find out about the new command line arguments at https://www.jalview.org/help/html/features/commandline.html 780s WARN - Error when running commands 780s Could not obtain JAVA_COMPILE_VERSION for comparison 780s Could not make Java version check 780s CMD [-open uniref50.fa] executed successfully! 780s Creating EPS file: /tmp/autopkgtest.d7OWAi/autopkgtest_tmp/uniref50_out.eps 781s Output generated in eps format in /tmp/autopkgtest.d7OWAi/autopkgtest_tmp/uniref50_out.eps 781s Could not obtain JAVA_COMPILE_VERSION for comparison 781s Could not make Java version check 782s MemorySetting Property 'jvmmempc' (null) too large. Leaving free space for OS and reducing to (3552567296). 782s Cannot get screen resolution: 782s No X11 DISPLAY variable was set, 782s or no headful library support was found, 782s but this program performed an operation which requires it, 782s 782s Cannot get screen size height and width: 782s No X11 DISPLAY variable was set, 782s or no headful library support was found, 782s but this program performed an operation which requires it, 782s 782s Java version: 21.0.5 782s Java home: /usr/lib/jvm/java-21-openjdk-arm64 782s Java arch: aarch64 Linux 6.11.0-8-generic 782s Using default properties file '/home/ubuntu/.jalview_nonrelease_properties' 782s Jalview non-release version: 2.11.3.1+dfsg-1 (deb) 782s Setting initial log level to INFO 783s SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". 783s SLF4J: Defaulting to no-operation (NOP) logger implementation 783s SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. 783s INFO - Loaded Sequence Ontology from so-xp-simple.obo.zip (165ms) 783s INFO - Getting messages for lang: en 783s WARN - It looks like you are using old command line arguments. These are now deprecated and will be removed in a future release of Jalview. Find out about the new command line arguments at https://www.jalview.org/help/html/features/commandline.html 783s WARN - Error when running commands 783s Could not obtain JAVA_COMPILE_VERSION for comparison 783s Could not make Java version check 783s CMD [-open uniref50.fa] executed successfully! 783s Creating HTML image: uniref50_out.html 783s Exporting alignment as HTML file 784s HTML Export completed 784s java.io.FileNotFoundException: /tmp/autopkgtest.d7OWAi/autopkgtest_tmp/examples/javascript/facebox-1.3.js (No such file or directory) 784s at java.base/java.io.FileInputStream.open0(Native Method) 784s at java.base/java.io.FileInputStream.open(FileInputStream.java:213) 784s at java.base/java.io.FileInputStream.(FileInputStream.java:152) 784s at java.base/java.io.FileInputStream.(FileInputStream.java:106) 784s at java.base/sun.net.www.protocol.file.FileURLConnection.connect(FileURLConnection.java:84) 784s at java.base/sun.net.www.protocol.file.FileURLConnection.getInputStream(FileURLConnection.java:180) 784s at java.base/java.net.URL.openStream(URL.java:1325) 784s at jalview.io.HTMLOutput.readFileAsString(HTMLOutput.java:121) 784s at jalview.io.HtmlSvgOutput.getHtml(HtmlSvgOutput.java:177) 784s at jalview.io.HtmlSvgOutput.doOutput(HtmlSvgOutput.java:301) 784s at jalview.io.HtmlSvgOutput.run(HtmlSvgOutput.java:248) 784s at jalview.io.HTMLOutput.exportHTML(HTMLOutput.java:342) 784s at jalview.io.HTMLOutput.exportHTML(HTMLOutput.java:308) 784s at jalview.bin.Jalview.doMain(Jalview.java:1039) 784s at jalview.bin.Jalview.main(Jalview.java:253) 784s Output generated in html format in /tmp/autopkgtest.d7OWAi/autopkgtest_tmp/uniref50_out.html 784s Could not obtain JAVA_COMPILE_VERSION for comparison 784s Could not make Java version check 785s MemorySetting Property 'jvmmempc' (null) too large. Leaving free space for OS and reducing to (3552567296). 785s Cannot get screen resolution: 785s No X11 DISPLAY variable was set, 785s or no headful library support was found, 785s but this program performed an operation which requires it, 785s 785s Cannot get screen size height and width: 785s No X11 DISPLAY variable was set, 785s or no headful library support was found, 785s but this program performed an operation which requires it, 785s 785s Java version: 21.0.5 785s Java home: /usr/lib/jvm/java-21-openjdk-arm64 785s Java arch: aarch64 Linux 6.11.0-8-generic 785s Using default properties file '/home/ubuntu/.jalview_nonrelease_properties' 785s Jalview non-release version: 2.11.3.1+dfsg-1 (deb) 785s Setting initial log level to INFO 786s SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". 786s SLF4J: Defaulting to no-operation (NOP) logger implementation 786s SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. 786s INFO - Loaded Sequence Ontology from so-xp-simple.obo.zip (170ms) 786s INFO - Getting messages for lang: en 786s WARN - It looks like you are using old command line arguments. These are now deprecated and will be removed in a future release of Jalview. Find out about the new command line arguments at https://www.jalview.org/help/html/features/commandline.html 786s WARN - Error when running commands 786s Could not obtain JAVA_COMPILE_VERSION for comparison 786s Could not make Java version check 786s CMD [-open uniref50.fa] executed successfully! 787s Creating PNG image: uniref50_out.png 788s Output generated in png format in /tmp/autopkgtest.d7OWAi/autopkgtest_tmp/uniref50_out.png 788s autopkgtest [19:16:49]: test jalview-run-unit-test: -----------------------] 788s autopkgtest [19:16:49]: test jalview-run-unit-test: - - - - - - - - - - results - - - - - - - - - - 788s jalview-run-unit-test PASS 789s autopkgtest [19:16:50]: test command1: preparing testbed 869s autopkgtest [19:18:10]: testbed dpkg architecture: arm64 869s autopkgtest [19:18:10]: testbed apt version: 2.9.8 869s autopkgtest [19:18:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup 870s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 870s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2689 kB] 871s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [41.7 kB] 871s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 871s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [183 kB] 871s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [241 kB] 871s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 871s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [1982 kB] 871s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [34.8 kB] 871s Fetched 5303 kB in 1s (4060 kB/s) 872s Reading package lists... 874s Reading package lists... 875s Building dependency tree... 875s Reading state information... 875s Calculating upgrade... 876s The following packages will be upgraded: 876s libevdev2 libftdi1-2 libinih1 nano python3-lazr.uri 876s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 876s Need to get 374 kB of archives. 876s After this operation, 17.4 kB of additional disk space will be used. 876s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libevdev2 arm64 1.13.3+dfsg-1 [36.0 kB] 876s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 nano arm64 8.2-1 [289 kB] 876s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libftdi1-2 arm64 1.5-7 [28.4 kB] 876s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libinih1 arm64 58-1ubuntu1 [7412 B] 876s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lazr.uri all 1.0.6-4 [13.6 kB] 877s Fetched 374 kB in 0s (882 kB/s) 877s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 877s Preparing to unpack .../libevdev2_1.13.3+dfsg-1_arm64.deb ... 877s Unpacking libevdev2:arm64 (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 877s Preparing to unpack .../archives/nano_8.2-1_arm64.deb ... 877s Unpacking nano (8.2-1) over (8.1-1) ... 877s Preparing to unpack .../libftdi1-2_1.5-7_arm64.deb ... 877s Unpacking libftdi1-2:arm64 (1.5-7) over (1.5-6build5) ... 877s Preparing to unpack .../libinih1_58-1ubuntu1_arm64.deb ... 877s Unpacking libinih1:arm64 (58-1ubuntu1) over (55-1ubuntu2) ... 877s Preparing to unpack .../python3-lazr.uri_1.0.6-4_all.deb ... 877s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 877s Setting up libinih1:arm64 (58-1ubuntu1) ... 877s Setting up python3-lazr.uri (1.0.6-4) ... 878s Setting up libftdi1-2:arm64 (1.5-7) ... 878s Setting up nano (8.2-1) ... 878s Setting up libevdev2:arm64 (1.13.3+dfsg-1) ... 878s Processing triggers for man-db (2.12.1-3) ... 878s Processing triggers for install-info (7.1.1-1) ... 879s Processing triggers for libc-bin (2.40-1ubuntu3) ... 879s Reading package lists... 879s Building dependency tree... 879s Reading state information... 880s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 880s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 880s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 880s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 880s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 882s Reading package lists... 882s Reading package lists... 882s Building dependency tree... 882s Reading state information... 882s Calculating upgrade... 883s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 883s Reading package lists... 883s Building dependency tree... 883s Reading state information... 884s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 888s Reading package lists... 889s Building dependency tree... 889s Reading state information... 889s Starting pkgProblemResolver with broken count: 0 889s Starting 2 pkgProblemResolver with broken count: 0 889s Done 890s The following additional packages will be installed: 890s adwaita-icon-theme ant at-spi2-common ca-certificates-java 890s dconf-gsettings-backend dconf-service default-jre default-jre-headless 890s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 890s gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme igv java-common 890s java-wrappers libapache-pom-java libasound2-data libasound2t64 890s libatinject-jsr330-api-java libatk-bridge2.0-0t64 libatk1.0-0t64 890s libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 890s libbatik-java libcairo-gobject2 libcairo2 libcolord2 libcolt-free-java 890s libcommons-beanutils-java libcommons-codec-java libcommons-collections3-java 890s libcommons-compress-java libcommons-configuration-java libcommons-io-java 890s libcommons-jexl2-java libcommons-lang-java libcommons-lang3-java 890s libcommons-logging-java libcommons-math3-java libcommons-parent-java 890s libcups2t64 libdatrie1 libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 890s libdsiutils-java libepoxy0 liberror-prone-java libfastutil-java 890s libfontconfig1 libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 890s libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 890s libgoogle-gson-java libgraphite2-3 libgtk-3-0t64 libgtk-3-common 890s libguava-java libharfbuzz0b libhtsjdk-java libhttpclient-java 890s libhttpcore-java libicb-utils-java libicu4j-java libjaxp1.3-java libjbig0 890s libjide-oss-java libjpeg-turbo8 libjpeg8 libjsap-java libjsr305-java 890s liblcms2-2 liblerc4 liblightcouch-java liblog4j1.2-java liblog4j2-java 890s liblogback-java libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 890s libmjson-java libmongodb-java libnb-absolutelayout-java libncbi-ngs3 890s libncbi-vdb3 libngs-java libngs-jni libpango-1.0-0 libpangocairo-1.0-0 890s libpangoft2-1.0-0 libpcsclite1 libpixman-1-0 libprotobuf-java librhino-java 890s libsharpyuv0 libslf4j-java libsnappy-java libsnappy-jni libsnappy1v5 890s libswing-layout-java libthai-data libthai0 libtiff6 libvulkan1 890s libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 890s libwebp7 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 890s libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 890s libxcomposite1 libxcursor1 libxdamage1 libxfixes3 libxi6 libxinerama1 890s libxml-commons-external-java libxmlgraphics-commons-java libxpp3-java 890s libxrandr2 libxrender1 libxshmfence1 libxstream-java libxtst6 libxxf86vm1 890s mesa-libgallium ncbi-vdb-data openjdk-21-jre openjdk-21-jre-headless 890s ubuntu-mono unzip x11-common 890s Suggested packages: 890s ant-doc default-jdk | java-compiler | java-sdk alsa-utils libasound2-plugins 890s libatinject-jsr330-api-java-doc colord libcommons-collections3-java-doc 890s libasm-java libxz-java libcommons-digester-java libcommons-jxpath-java 890s libcommons-vfs-java libxml-commons-resolver1.1-java libcommons-lang-java-doc 890s libavalon-framework-java libexcalibur-logkit-java cups-common 890s libgoogle-gson-java-doc gvfs picard-tools libjide-oss-java-doc 890s libjsap-java-doc libjsr305-java-doc liblcms2-utils liblog4j1.2-java-doc 890s libmail-java libactivation-java libcommons-csv-java 890s libconversant-disruptor-java libdisruptor-java libgeronimo-jms-1.1-spec-java 890s libjackson2-dataformat-xml-java libjackson2-dataformat-yaml libjansi-java 890s libjctools-java libjeromq-java libwoodstox-java libjanino-java 890s libjetty9-java libservlet-api-java libtomcat9-java libngs-java-doc pcscd 890s rhino libswing-layout-java-doc libxmlgraphics-commons-java-doc 890s libcglib-nodep-java libdom4j-java libjdom1-java libjdom2-java 890s libjettison-java libjoda-time-java libkxml2-java libxom-java libnss-mdns 890s fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho 890s fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic zip 890s Recommended packages: 890s librsvg2-common ant-optional libmariadb-java alsa-ucm-conf 890s alsa-topology-conf at-spi2-core libgdk-pixbuf2.0-bin libgl1-amber-dri 890s libgtk-3-bin mesa-vulkan-drivers | vulkan-icd libatk-wrapper-java-jni 890s fonts-dejavu-extra 890s The following NEW packages will be installed: 890s adwaita-icon-theme ant at-spi2-common autopkgtest-satdep 890s ca-certificates-java dconf-gsettings-backend dconf-service default-jre 890s default-jre-headless fontconfig fontconfig-config fonts-dejavu-core 890s fonts-dejavu-mono gtk-update-icon-cache hicolor-icon-theme 890s humanity-icon-theme igv java-common java-wrappers libapache-pom-java 890s libasound2-data libasound2t64 libatinject-jsr330-api-java 890s libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 890s libavahi-common-data libavahi-common3 libbatik-java libcairo-gobject2 890s libcairo2 libcolord2 libcolt-free-java libcommons-beanutils-java 890s libcommons-codec-java libcommons-collections3-java libcommons-compress-java 890s libcommons-configuration-java libcommons-io-java libcommons-jexl2-java 890s libcommons-lang-java libcommons-lang3-java libcommons-logging-java 890s libcommons-math3-java libcommons-parent-java libcups2t64 libdatrie1 890s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 libdsiutils-java 890s libepoxy0 liberror-prone-java libfastutil-java libfontconfig1 libgbm1 890s libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri 890s libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgoogle-gson-java 890s libgraphite2-3 libgtk-3-0t64 libgtk-3-common libguava-java libharfbuzz0b 890s libhtsjdk-java libhttpclient-java libhttpcore-java libicb-utils-java 890s libicu4j-java libjaxp1.3-java libjbig0 libjide-oss-java libjpeg-turbo8 890s libjpeg8 libjsap-java libjsr305-java liblcms2-2 liblerc4 liblightcouch-java 890s liblog4j1.2-java liblog4j2-java liblogback-java libmbedcrypto7t64 890s libmbedtls14t64 libmbedx509-1t64 libmjson-java libmongodb-java 890s libnb-absolutelayout-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni 890s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 890s libpixman-1-0 libprotobuf-java librhino-java libsharpyuv0 libslf4j-java 890s libsnappy-java libsnappy-jni libsnappy1v5 libswing-layout-java libthai-data 890s libthai0 libtiff6 libvulkan1 libwayland-client0 libwayland-cursor0 890s libwayland-egl1 libwayland-server0 libwebp7 libx11-xcb1 libxcb-dri2-0 890s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 890s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 libxcursor1 890s libxdamage1 libxfixes3 libxi6 libxinerama1 libxml-commons-external-java 890s libxmlgraphics-commons-java libxpp3-java libxrandr2 libxrender1 890s libxshmfence1 libxstream-java libxtst6 libxxf86vm1 mesa-libgallium 890s ncbi-vdb-data openjdk-21-jre openjdk-21-jre-headless ubuntu-mono unzip 890s x11-common 890s 0 upgraded, 155 newly installed, 0 to remove and 0 not upgraded. 890s Need to get 141 MB/141 MB of archives. 890s After this operation, 421 MB of additional disk space will be used. 890s Get:1 /tmp/autopkgtest.d7OWAi/6-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [700 B] 890s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 891s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 891s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 891s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.21-1 [46.2 kB] 891s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 891s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 891s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 891s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 891s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 891s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1 [145 kB] 891s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 gtk-update-icon-cache arm64 4.16.2+ds-2 [51.1 kB] 891s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 hicolor-icon-theme all 0.18-1 [13.5 kB] 891s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 humanity-icon-theme all 0.6.16 [1282 kB] 891s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 ubuntu-mono all 24.04-0ubuntu1 [151 kB] 891s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 adwaita-icon-theme all 47.0-1 [525 kB] 891s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 ca-certificates-java all 20240118 [11.6 kB] 891s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 java-common all 0.76 [6852 B] 891s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.14-2build1 [161 kB] 891s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcsclite1 arm64 2.3.0-1 [24.4 kB] 891s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre-headless arm64 21.0.5+11-1 [45.7 MB] 893s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre-headless arm64 2:1.21-76 [3176 B] 893s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 ant all 1.10.14-1 [2147 kB] 893s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 at-spi2-common all 2.54.0-1 [8774 B] 893s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 libdconf1 arm64 0.40.0-4build2 [39.8 kB] 893s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-service arm64 0.40.0-4build2 [26.9 kB] 893s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-gsettings-backend arm64 0.40.0-4build2 [22.0 kB] 893s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [55.0 kB] 893s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 893s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [80.2 kB] 893s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [66.6 kB] 893s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 893s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 893s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 893s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 893s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.42.2-1build1 [204 kB] 893s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 893s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 893s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 893s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 893s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo-gobject2 arm64 1.18.2-2 [127 kB] 893s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolord2 arm64 1.4.7-1build2 [149 kB] 893s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common-data arm64 0.8-13ubuntu6 [29.6 kB] 893s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common3 arm64 0.8-13ubuntu6 [23.3 kB] 893s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-client3 arm64 0.8-13ubuntu6 [27.2 kB] 893s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libcups2t64 arm64 2.4.10-1ubuntu2 [271 kB] 893s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libepoxy0 arm64 1.5.10-1build1 [240 kB] 893s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 893s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 9.0.0-1 [486 kB] 893s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 893s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 893s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 893s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 893s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-2 [233 kB] 893s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-2 [48.8 kB] 893s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-2 [27.5 kB] 893s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB] 893s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-cursor0 arm64 1.23.0-1 [10.6 kB] 893s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-egl1 arm64 1.23.0-1 [5636 B] 894s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcomposite1 arm64 1:0.4.5-1build3 [6336 B] 894s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB] 894s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcursor1 arm64 1:1.2.2-1 [21.2 kB] 894s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libxdamage1 arm64 1:1.1.6-1build1 [6236 B] 894s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libxinerama1 arm64 2:1.1.4-3build1 [6394 B] 894s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrandr2 arm64 2:1.5.4-1 [19.6 kB] 894s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-common all 3.24.43-3ubuntu2 [1202 kB] 894s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-0t64 arm64 3.24.43-3ubuntu2 [2898 kB] 894s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB] 894s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB] 894s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.7-1build1 [7870 B] 894s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B] 894s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B] 894s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB] 894s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B] 894s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB] 894s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B] 894s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB] 894s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B] 894s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B] 894s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.122-1 [20.9 kB] 894s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.122-1 [20.8 kB] 894s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB] 894s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.290.0-1 [153 kB] 894s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB] 894s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB] 894s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB] 894s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB] 894s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB] 894s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB] 894s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2-data all 1.2.12-1 [21.0 kB] 894s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2t64 arm64 1.2.12-1 [384 kB] 894s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 894s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 894s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 libxtst6 arm64 2:1.2.3-1.1build1 [13.0 kB] 894s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre arm64 21.0.5+11-1 [221 kB] 894s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre arm64 2:1.21-76 [918 B] 894s Get:97 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 894s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 java-wrappers all 0.5 [9042 B] 894s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjaxp1.3-java all 1.3.05-6 [227 kB] 894s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxml-commons-external-java all 1.4.01-6 [240 kB] 894s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapache-pom-java all 33-2 [5874 B] 894s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-parent-java all 56-1 [10.7 kB] 894s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-io-java all 2.16.1-1 [451 kB] 895s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 895s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxmlgraphics-commons-java all 2.8-2 [619 kB] 895s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libbatik-java all 1.17+dfsg-1 [3877 kB] 895s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-lang3-java all 3.14.0-1 [586 kB] 895s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-math3-java all 3.6.1-3 [2016 kB] 895s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfastutil-java all 8.5.14+dfsg-1 [20.2 MB] 896s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 libatinject-jsr330-api-java all 1.0+ds1-5 [5348 B] 896s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 liberror-prone-java all 2.18.0-1 [22.5 kB] 896s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjsr305-java all 0.1~+svn49-11 [27.0 kB] 896s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 libguava-java all 32.0.1-1 [2692 kB] 896s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxpp3-java all 1.1.4c-3 [292 kB] 896s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxstream-java all 1.4.20-1 [561 kB] 896s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjsap-java all 2.1-5 [100 kB] 896s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 libslf4j-java all 1.7.32-1 [141 kB] 896s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblogback-java all 1:1.2.11-5 [697 kB] 896s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-lang-java all 2.6-10 [270 kB] 896s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-configuration-java all 1.10-6 [342 kB] 896s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-collections3-java all 3.2.2-3 [526 kB] 896s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 libdsiutils-java all 2.7.3+dfsg-1 [511 kB] 896s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgoogle-gson-java all 2.10.1-1 [252 kB] 896s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-compress-java all 1.25.0-1 [612 kB] 896s Get:125 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-jexl2-java all 2.1.1-6 [250 kB] 896s Get:126 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmjson-java all 1.4.0-3 [60.4 kB] 896s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedcrypto7t64 arm64 2.28.8-1 [209 kB] 896s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedx509-1t64 arm64 2.28.8-1 [47.2 kB] 896s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedtls14t64 arm64 2.28.8-1 [82.2 kB] 896s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 ncbi-vdb-data all 3.0.2+dfsg-2build2 [67.5 kB] 896s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-vdb3 arm64 3.0.2+dfsg-2build2 [1143 kB] 896s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-ngs3 arm64 3.0.3+dfsg-9ubuntu1 [145 kB] 896s Get:133 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-jni arm64 3.0.3+dfsg-9ubuntu1 [4844 B] 896s Get:134 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-java arm64 3.0.3+dfsg-9ubuntu1 [91.1 kB] 896s Get:135 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 librhino-java all 1.7.15-1 [1354 kB] 896s Get:136 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 896s Get:137 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-jni arm64 1.1.10.5-2 [6618 B] 896s Get:138 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-java all 1.1.10.5-2 [83.7 kB] 896s Get:139 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtsjdk-java all 4.1.0+dfsg-2 [1823 kB] 896s Get:140 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-beanutils-java all 1.9.4-2 [228 kB] 896s Get:141 http://ftpmaster.internal/ubuntu plucky/universe arm64 libicu4j-java all 73.2-1 [16.4 MB] 897s Get:142 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcolt-free-java all 1.2.0+dfsg-8 [438 kB] 897s Get:143 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblog4j1.2-java all 1.2.17-11 [439 kB] 897s Get:144 http://ftpmaster.internal/ubuntu plucky/universe arm64 libicb-utils-java all 2.0.1+git20161002.afee1d9-5 [80.9 kB] 897s Get:145 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjide-oss-java all 3.7.6+dfsg-2 [1312 kB] 897s Get:146 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-codec-java all 1.16.0-1 [306 kB] 897s Get:147 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhttpcore-java all 4.4.16-1 [612 kB] 897s Get:148 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhttpclient-java all 4.5.14-1 [1241 kB] 897s Get:149 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblightcouch-java all 0.2.0-1 [74.2 kB] 897s Get:150 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmongodb-java all 3.6.3-2 [1899 kB] 897s Get:151 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblog4j2-java all 2.19.0-2 [2294 kB] 897s Get:152 http://ftpmaster.internal/ubuntu plucky/universe arm64 libnb-absolutelayout-java all 12.1-3 [7292 B] 897s Get:153 http://ftpmaster.internal/ubuntu plucky/universe arm64 libprotobuf-java all 3.21.12-9ubuntu1 [1208 kB] 897s Get:154 http://ftpmaster.internal/ubuntu plucky/universe arm64 libswing-layout-java all 1.0.4-4.1 [44.4 kB] 897s Get:155 http://ftpmaster.internal/ubuntu plucky/universe arm64 igv all 2.17.3+dfsg-1 [3254 kB] 898s Fetched 141 MB in 7s (20.2 MB/s) 898s Selecting previously unselected package libgdk-pixbuf2.0-common. 898s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 898s Preparing to unpack .../000-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 898s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 898s Selecting previously unselected package libjpeg-turbo8:arm64. 898s Preparing to unpack .../001-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 898s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 898s Selecting previously unselected package libjpeg8:arm64. 898s Preparing to unpack .../002-libjpeg8_8c-2ubuntu11_arm64.deb ... 898s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 898s Selecting previously unselected package libdeflate0:arm64. 898s Preparing to unpack .../003-libdeflate0_1.21-1_arm64.deb ... 898s Unpacking libdeflate0:arm64 (1.21-1) ... 898s Selecting previously unselected package libjbig0:arm64. 898s Preparing to unpack .../004-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 898s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 898s Selecting previously unselected package liblerc4:arm64. 898s Preparing to unpack .../005-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 898s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 898s Selecting previously unselected package libsharpyuv0:arm64. 898s Preparing to unpack .../006-libsharpyuv0_1.4.0-0.1_arm64.deb ... 898s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 898s Selecting previously unselected package libwebp7:arm64. 898s Preparing to unpack .../007-libwebp7_1.4.0-0.1_arm64.deb ... 898s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 898s Selecting previously unselected package libtiff6:arm64. 898s Preparing to unpack .../008-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 898s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 898s Selecting previously unselected package libgdk-pixbuf-2.0-0:arm64. 898s Preparing to unpack .../009-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_arm64.deb ... 898s Unpacking libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 898s Selecting previously unselected package gtk-update-icon-cache. 898s Preparing to unpack .../010-gtk-update-icon-cache_4.16.2+ds-2_arm64.deb ... 898s No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. 898s No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. 898s Unpacking gtk-update-icon-cache (4.16.2+ds-2) ... 898s Selecting previously unselected package hicolor-icon-theme. 898s Preparing to unpack .../011-hicolor-icon-theme_0.18-1_all.deb ... 898s Unpacking hicolor-icon-theme (0.18-1) ... 898s Selecting previously unselected package humanity-icon-theme. 898s Preparing to unpack .../012-humanity-icon-theme_0.6.16_all.deb ... 898s Unpacking humanity-icon-theme (0.6.16) ... 899s Selecting previously unselected package ubuntu-mono. 899s Preparing to unpack .../013-ubuntu-mono_24.04-0ubuntu1_all.deb ... 899s Unpacking ubuntu-mono (24.04-0ubuntu1) ... 899s Selecting previously unselected package adwaita-icon-theme. 899s Preparing to unpack .../014-adwaita-icon-theme_47.0-1_all.deb ... 899s Unpacking adwaita-icon-theme (47.0-1) ... 900s Selecting previously unselected package ca-certificates-java. 900s Preparing to unpack .../015-ca-certificates-java_20240118_all.deb ... 900s Unpacking ca-certificates-java (20240118) ... 900s Selecting previously unselected package java-common. 900s Preparing to unpack .../016-java-common_0.76_all.deb ... 900s Unpacking java-common (0.76) ... 900s Selecting previously unselected package liblcms2-2:arm64. 900s Preparing to unpack .../017-liblcms2-2_2.14-2build1_arm64.deb ... 900s Unpacking liblcms2-2:arm64 (2.14-2build1) ... 900s Selecting previously unselected package libpcsclite1:arm64. 900s Preparing to unpack .../018-libpcsclite1_2.3.0-1_arm64.deb ... 900s Unpacking libpcsclite1:arm64 (2.3.0-1) ... 900s Selecting previously unselected package openjdk-21-jre-headless:arm64. 900s Preparing to unpack .../019-openjdk-21-jre-headless_21.0.5+11-1_arm64.deb ... 900s Unpacking openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 901s Selecting previously unselected package default-jre-headless. 901s Preparing to unpack .../020-default-jre-headless_2%3a1.21-76_arm64.deb ... 901s Unpacking default-jre-headless (2:1.21-76) ... 901s Selecting previously unselected package ant. 901s Preparing to unpack .../021-ant_1.10.14-1_all.deb ... 901s Unpacking ant (1.10.14-1) ... 901s Selecting previously 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libxinerama1:arm64 (2:1.1.4-3build1) ... 903s Selecting previously unselected package libxrandr2:arm64. 903s Preparing to unpack .../063-libxrandr2_2%3a1.5.4-1_arm64.deb ... 903s Unpacking libxrandr2:arm64 (2:1.5.4-1) ... 903s Selecting previously unselected package libgtk-3-common. 903s Preparing to unpack .../064-libgtk-3-common_3.24.43-3ubuntu2_all.deb ... 903s Unpacking libgtk-3-common (3.24.43-3ubuntu2) ... 903s Selecting previously unselected package libgtk-3-0t64:arm64. 903s Preparing to unpack .../065-libgtk-3-0t64_3.24.43-3ubuntu2_arm64.deb ... 903s Unpacking libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 903s Selecting previously unselected package libglvnd0:arm64. 903s Preparing to unpack .../066-libglvnd0_1.7.0-1build1_arm64.deb ... 903s Unpacking libglvnd0:arm64 (1.7.0-1build1) ... 904s Selecting previously unselected package libglapi-mesa:arm64. 904s Preparing to unpack .../067-libglapi-mesa_24.2.3-1ubuntu1_arm64.deb ... 904s Unpacking libglapi-mesa:arm64 (24.2.3-1ubuntu1) 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package default-jre. 905s Preparing to unpack .../094-default-jre_2%3a1.21-76_arm64.deb ... 905s Unpacking default-jre (2:1.21-76) ... 905s Selecting previously unselected package unzip. 905s Preparing to unpack .../095-unzip_6.0-28ubuntu6_arm64.deb ... 905s Unpacking unzip (6.0-28ubuntu6) ... 905s Selecting previously unselected package java-wrappers. 905s Preparing to unpack .../096-java-wrappers_0.5_all.deb ... 905s Unpacking java-wrappers (0.5) ... 905s Selecting previously unselected package libjaxp1.3-java. 905s Preparing to unpack .../097-libjaxp1.3-java_1.3.05-6_all.deb ... 905s Unpacking libjaxp1.3-java (1.3.05-6) ... 905s Selecting previously unselected package libxml-commons-external-java. 905s Preparing to unpack .../098-libxml-commons-external-java_1.4.01-6_all.deb ... 905s Unpacking libxml-commons-external-java (1.4.01-6) ... 905s Selecting previously unselected package libapache-pom-java. 905s Preparing to unpack .../099-libapache-pom-java_33-2_all.deb ... 905s Unpacking 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... 906s Selecting previously unselected package libjsr305-java. 906s Preparing to unpack .../110-libjsr305-java_0.1~+svn49-11_all.deb ... 906s Unpacking libjsr305-java (0.1~+svn49-11) ... 906s Selecting previously unselected package libguava-java. 906s Preparing to unpack .../111-libguava-java_32.0.1-1_all.deb ... 906s Unpacking libguava-java (32.0.1-1) ... 906s Selecting previously unselected package libxpp3-java. 906s Preparing to unpack .../112-libxpp3-java_1.1.4c-3_all.deb ... 906s Unpacking libxpp3-java (1.1.4c-3) ... 906s Selecting previously unselected package libxstream-java. 906s Preparing to unpack .../113-libxstream-java_1.4.20-1_all.deb ... 906s Unpacking libxstream-java (1.4.20-1) ... 906s Selecting previously unselected package libjsap-java. 906s Preparing to unpack .../114-libjsap-java_2.1-5_all.deb ... 906s Unpacking libjsap-java (2.1-5) ... 906s Selecting previously unselected package libslf4j-java. 906s Preparing to unpack .../115-libslf4j-java_1.7.32-1_all.deb ... 906s Unpacking libslf4j-java (1.7.32-1) ... 906s Selecting previously unselected package liblogback-java. 906s Preparing to unpack .../116-liblogback-java_1%3a1.2.11-5_all.deb ... 906s Unpacking liblogback-java (1:1.2.11-5) ... 906s Selecting previously unselected package libcommons-lang-java. 906s Preparing to unpack .../117-libcommons-lang-java_2.6-10_all.deb ... 906s Unpacking libcommons-lang-java (2.6-10) ... 906s Selecting previously unselected package libcommons-configuration-java. 906s Preparing to unpack .../118-libcommons-configuration-java_1.10-6_all.deb ... 906s Unpacking libcommons-configuration-java (1.10-6) ... 906s Selecting previously unselected package libcommons-collections3-java. 906s Preparing to unpack .../119-libcommons-collections3-java_3.2.2-3_all.deb ... 906s Unpacking libcommons-collections3-java (3.2.2-3) ... 907s Selecting previously unselected package libdsiutils-java. 907s Preparing to unpack .../120-libdsiutils-java_2.7.3+dfsg-1_all.deb ... 907s Unpacking libdsiutils-java (2.7.3+dfsg-1) ... 907s Selecting previously unselected package libgoogle-gson-java. 907s Preparing to unpack .../121-libgoogle-gson-java_2.10.1-1_all.deb ... 907s Unpacking libgoogle-gson-java (2.10.1-1) ... 907s Selecting previously unselected package libcommons-compress-java. 907s Preparing to unpack .../122-libcommons-compress-java_1.25.0-1_all.deb ... 907s Unpacking libcommons-compress-java (1.25.0-1) ... 907s Selecting previously unselected package libcommons-jexl2-java. 907s Preparing to unpack .../123-libcommons-jexl2-java_2.1.1-6_all.deb ... 907s Unpacking libcommons-jexl2-java (2.1.1-6) ... 907s Selecting previously unselected package libmjson-java. 907s Preparing to unpack .../124-libmjson-java_1.4.0-3_all.deb ... 907s Unpacking libmjson-java (1.4.0-3) ... 907s Selecting previously unselected package libmbedcrypto7t64:arm64. 907s Preparing to unpack .../125-libmbedcrypto7t64_2.28.8-1_arm64.deb ... 907s Unpacking libmbedcrypto7t64:arm64 (2.28.8-1) ... 907s Selecting previously unselected package libmbedx509-1t64:arm64. 907s Preparing to unpack .../126-libmbedx509-1t64_2.28.8-1_arm64.deb ... 907s Unpacking libmbedx509-1t64:arm64 (2.28.8-1) ... 907s Selecting previously unselected package libmbedtls14t64:arm64. 907s Preparing to unpack .../127-libmbedtls14t64_2.28.8-1_arm64.deb ... 907s Unpacking libmbedtls14t64:arm64 (2.28.8-1) ... 907s Selecting previously unselected package ncbi-vdb-data. 907s Preparing to unpack .../128-ncbi-vdb-data_3.0.2+dfsg-2build2_all.deb ... 907s Unpacking ncbi-vdb-data (3.0.2+dfsg-2build2) ... 907s Selecting previously unselected package libncbi-vdb3:arm64. 907s Preparing to unpack .../129-libncbi-vdb3_3.0.2+dfsg-2build2_arm64.deb ... 907s Unpacking libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 907s Selecting previously unselected package libncbi-ngs3:arm64. 907s Preparing to unpack .../130-libncbi-ngs3_3.0.3+dfsg-9ubuntu1_arm64.deb ... 907s Unpacking libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 907s Selecting previously unselected package libngs-jni:arm64. 907s Preparing to unpack .../131-libngs-jni_3.0.3+dfsg-9ubuntu1_arm64.deb ... 907s Unpacking libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 907s Selecting previously unselected package libngs-java:arm64. 907s Preparing to unpack .../132-libngs-java_3.0.3+dfsg-9ubuntu1_arm64.deb ... 907s Unpacking libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 907s Selecting previously unselected package librhino-java. 907s Preparing to unpack .../133-librhino-java_1.7.15-1_all.deb ... 907s Unpacking librhino-java (1.7.15-1) ... 907s Selecting previously unselected package libsnappy1v5:arm64. 907s Preparing to unpack .../134-libsnappy1v5_1.2.1-1_arm64.deb ... 907s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 907s Selecting previously unselected package libsnappy-jni. 907s Preparing to unpack .../135-libsnappy-jni_1.1.10.5-2_arm64.deb ... 907s Unpacking libsnappy-jni (1.1.10.5-2) ... 907s Selecting previously unselected package libsnappy-java. 907s Preparing to unpack .../136-libsnappy-java_1.1.10.5-2_all.deb ... 907s Unpacking libsnappy-java (1.1.10.5-2) ... 907s Selecting previously unselected package libhtsjdk-java. 907s Preparing to unpack .../137-libhtsjdk-java_4.1.0+dfsg-2_all.deb ... 907s Unpacking libhtsjdk-java (4.1.0+dfsg-2) ... 907s Selecting previously unselected package libcommons-beanutils-java. 907s Preparing to unpack .../138-libcommons-beanutils-java_1.9.4-2_all.deb ... 907s Unpacking libcommons-beanutils-java (1.9.4-2) ... 907s Selecting previously unselected package libicu4j-java. 907s Preparing to unpack .../139-libicu4j-java_73.2-1_all.deb ... 907s Unpacking libicu4j-java (73.2-1) ... 907s Selecting previously unselected package libcolt-free-java. 908s Preparing to unpack .../140-libcolt-free-java_1.2.0+dfsg-8_all.deb ... 908s Unpacking libcolt-free-java (1.2.0+dfsg-8) ... 908s Selecting previously unselected package liblog4j1.2-java. 908s Preparing to unpack .../141-liblog4j1.2-java_1.2.17-11_all.deb ... 908s Unpacking liblog4j1.2-java (1.2.17-11) ... 908s Selecting previously unselected package libicb-utils-java. 908s Preparing to unpack .../142-libicb-utils-java_2.0.1+git20161002.afee1d9-5_all.deb ... 908s Unpacking libicb-utils-java (2.0.1+git20161002.afee1d9-5) ... 908s Selecting previously unselected package libjide-oss-java. 908s Preparing to unpack .../143-libjide-oss-java_3.7.6+dfsg-2_all.deb ... 908s Unpacking libjide-oss-java (3.7.6+dfsg-2) ... 908s Selecting previously unselected package libcommons-codec-java. 908s Preparing to unpack .../144-libcommons-codec-java_1.16.0-1_all.deb ... 908s Unpacking libcommons-codec-java (1.16.0-1) ... 908s Selecting previously unselected package libhttpcore-java. 908s Preparing to unpack .../145-libhttpcore-java_4.4.16-1_all.deb ... 908s Unpacking libhttpcore-java (4.4.16-1) ... 908s Selecting previously unselected package libhttpclient-java. 908s Preparing to unpack .../146-libhttpclient-java_4.5.14-1_all.deb ... 908s Unpacking libhttpclient-java (4.5.14-1) ... 908s Selecting previously unselected package liblightcouch-java. 908s Preparing to unpack .../147-liblightcouch-java_0.2.0-1_all.deb ... 908s Unpacking liblightcouch-java (0.2.0-1) ... 908s Selecting previously unselected package libmongodb-java. 908s Preparing to unpack .../148-libmongodb-java_3.6.3-2_all.deb ... 908s Unpacking libmongodb-java (3.6.3-2) ... 908s Selecting previously unselected package liblog4j2-java. 908s Preparing to unpack .../149-liblog4j2-java_2.19.0-2_all.deb ... 908s Unpacking liblog4j2-java (2.19.0-2) ... 908s Selecting previously unselected package libnb-absolutelayout-java. 908s Preparing to unpack .../150-libnb-absolutelayout-java_12.1-3_all.deb ... 908s Unpacking libnb-absolutelayout-java (12.1-3) ... 908s Selecting previously unselected package libprotobuf-java. 908s Preparing to unpack .../151-libprotobuf-java_3.21.12-9ubuntu1_all.deb ... 908s Unpacking libprotobuf-java (3.21.12-9ubuntu1) ... 908s Selecting previously unselected package libswing-layout-java. 908s Preparing to unpack .../152-libswing-layout-java_1.0.4-4.1_all.deb ... 908s Unpacking libswing-layout-java (1.0.4-4.1) ... 908s Selecting previously unselected package igv. 908s Preparing to unpack .../153-igv_2.17.3+dfsg-1_all.deb ... 908s Unpacking igv (2.17.3+dfsg-1) ... 908s Selecting previously unselected package autopkgtest-satdep. 908s Preparing to unpack .../154-6-autopkgtest-satdep.deb ... 908s Unpacking autopkgtest-satdep (0) ... 908s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 908s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ... 908s Setting up liblcms2-2:arm64 (2.14-2build1) ... 908s Setting up libpixman-1-0:arm64 (0.42.2-1build1) ... 908s Setting up libfastutil-java (8.5.14+dfsg-1) ... 908s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 908s Setting up libwayland-server0:arm64 (1.23.0-1) ... 908s Setting up libx11-xcb1:arm64 (2:1.8.7-1build1) ... 908s Setting up libslf4j-java (1.7.32-1) ... 908s Setting up libxdamage1:arm64 (1:1.1.6-1build1) ... 908s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ... 908s Setting up libjide-oss-java (3.7.6+dfsg-2) ... 908s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 908s Setting up libjsr305-java (0.1~+svn49-11) ... 908s Setting up hicolor-icon-theme (0.18-1) ... 908s Setting up libxi6:arm64 (2:1.8.2-1) ... 908s Setting up libmbedcrypto7t64:arm64 (2.28.8-1) ... 908s Setting up libicu4j-java (73.2-1) ... 908s Setting up java-common (0.76) ... 908s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 908s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 908s Setting up libxcb-render0:arm64 (1.17.0-2) ... 908s Setting up liblogback-java (1:1.2.11-5) ... 908s Setting up libswing-layout-java (1.0.4-4.1) ... 908s Setting up libdrm-radeon1:arm64 (2.4.122-1) ... 908s Setting up libglvnd0:arm64 (1.7.0-1build1) ... 908s Setting up libgoogle-gson-java (2.10.1-1) ... 908s Setting up libmjson-java (1.4.0-3) ... 908s Setting up libxcb-glx0:arm64 (1.17.0-2) ... 908s Setting up unzip (6.0-28ubuntu6) ... 908s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 908s Setting up x11-common (1:7.7+23ubuntu3) ... 909s Setting up libdeflate0:arm64 (1.21-1) ... 909s Setting up liblog4j1.2-java (1.2.17-11) ... 909s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 909s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 909s Setting up libcolord2:arm64 (1.4.7-1build2) ... 909s Setting up libxxf86vm1:arm64 (1:1.1.4-1build4) ... 909s Setting up libsnappy1v5:arm64 (1.2.1-1) ... 909s Setting up libxcb-present0:arm64 (1.17.0-2) ... 909s Setting up libdconf1:arm64 (0.40.0-4build2) ... 909s Setting up libcommons-collections3-java (3.2.2-3) ... 909s Setting up libasound2-data (1.2.12-1) ... 909s Setting up libnb-absolutelayout-java (12.1-3) ... 909s Setting up librhino-java (1.7.15-1) ... 909s Setting up libasound2t64:arm64 (1.2.12-1) ... 909s Setting up libepoxy0:arm64 (1.5.10-1build1) ... 909s Setting up libxfixes3:arm64 (1:6.0.0-2build1) ... 909s Setting up libxcb-sync1:arm64 (1.17.0-2) ... 909s Setting up libapache-pom-java (33-2) ... 909s Setting up libavahi-common-data:arm64 (0.8-13ubuntu6) ... 909s Setting up libxpp3-java (1.1.4c-3) ... 909s Setting up libatinject-jsr330-api-java (1.0+ds1-5) ... 909s Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... 909s Setting up libxinerama1:arm64 (2:1.1.4-3build1) ... 909s Setting up fonts-dejavu-mono (2.37-8) ... 909s Setting up libxrandr2:arm64 (2:1.5.4-1) ... 909s Setting up fonts-dejavu-core (2.37-8) ... 909s Setting up libpcsclite1:arm64 (2.3.0-1) ... 909s Setting up libmongodb-java (3.6.3-2) ... 909s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 909s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 909s Setting up libvulkan1:arm64 (1.3.290.0-1) ... 909s Setting up libwebp7:arm64 (1.4.0-0.1) ... 909s Setting up libcolt-free-java (1.2.0+dfsg-8) ... 909s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ... 909s Setting up libgif7:arm64 (5.2.2-1ubuntu1) ... 909s Setting up libxshmfence1:arm64 (1.3-1build5) ... 909s Setting up at-spi2-common (2.54.0-1) ... 909s Setting up libxcb-randr0:arm64 (1.17.0-2) ... 909s Setting up libxml-commons-external-java (1.4.01-6) ... 909s Setting up libharfbuzz0b:arm64 (9.0.0-1) ... 909s Setting up ncbi-vdb-data (3.0.2+dfsg-2build2) ... 909s Setting up libthai-data (0.1.29-2build1) ... 909s Setting up libcommons-math3-java (3.6.1-3) ... 909s Setting up libwayland-egl1:arm64 (1.23.0-1) ... 909s Setting up libhttpcore-java (4.4.16-1) ... 909s Setting up ca-certificates-java (20240118) ... 909s No JRE found. Skipping Java certificates setup. 909s Setting up libjaxp1.3-java (1.3.05-6) ... 909s Setting up libsnappy-jni (1.1.10.5-2) ... 909s Setting up libxcomposite1:arm64 (1:0.4.5-1build3) ... 909s Setting up libdrm-amdgpu1:arm64 (2.4.122-1) ... 909s Setting up libwayland-client0:arm64 (1.23.0-1) ... 909s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 909s Setting up mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 909s Setting up libxstream-java (1.4.20-1) ... 909s Setting up libmbedx509-1t64:arm64 (2.28.8-1) ... 909s Setting up java-wrappers (0.5) ... 909s Setting up libatk1.0-0t64:arm64 (2.54.0-1) ... 909s Setting up openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 909s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode 909s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 909s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 909s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 909s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 909s Setting up libgbm1:arm64 (24.2.3-1ubuntu1) ... 909s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 909s Setting up libxtst6:arm64 (2:1.2.3-1.1build1) ... 909s Setting up libxcursor1:arm64 (1:1.2.2-1) ... 909s Setting up libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 909s Setting up libcommons-parent-java (56-1) ... 909s Setting up libavahi-common3:arm64 (0.8-13ubuntu6) ... 909s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 909s Setting up dconf-service (0.40.0-4build2) ... 909s Setting up libcommons-lang-java (2.6-10) ... 909s Setting up libcommons-jexl2-java (2.1.1-6) ... 909s Setting up libthai0:arm64 (0.1.29-2build1) ... 909s Setting up libcommons-lang3-java (3.14.0-1) ... 909s Setting up libmbedtls14t64:arm64 (2.28.8-1) ... 909s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 909s Setting up libwayland-cursor0:arm64 (1.23.0-1) ... 909s Setting up libcommons-beanutils-java (1.9.4-2) ... 909s Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 909s Setting up libsnappy-java (1.1.10.5-2) ... 909s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 909s Setting up libcommons-configuration-java (1.10-6) ... 909s Setting up libcommons-codec-java (1.16.0-1) ... 909s Setting up libavahi-client3:arm64 (0.8-13ubuntu6) ... 909s Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 909s Setting up gtk-update-icon-cache (4.16.2+ds-2) ... 909s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 911s Regenerating fonts cache... done. 911s Setting up libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 911s Setting up libglx0:arm64 (1.7.0-1build1) ... 911s Setting up dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 911s Setting up libcommons-compress-java (1.25.0-1) ... 911s Setting up libcommons-io-java (2.16.1-1) ... 911s Setting up libpango-1.0-0:arm64 (1.54.0+ds-2) ... 911s Setting up libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 911s Setting up libxmlgraphics-commons-java (2.8-2) ... 911s Setting up libcairo2:arm64 (1.18.2-2) ... 911s Setting up libgl1:arm64 (1.7.0-1build1) ... 911s Setting up libhttpclient-java (4.5.14-1) ... 911s Setting up liblightcouch-java (0.2.0-1) ... 911s Setting up libcairo-gobject2:arm64 (1.18.2-2) ... 911s Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 911s Setting up libcups2t64:arm64 (2.4.10-1ubuntu2) ... 911s Setting up libgtk-3-common (3.24.43-3ubuntu2) ... 911s Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 911s Setting up libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 911s Setting up libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 911s Setting up libbatik-java (1.17+dfsg-1) ... 911s Setting up liblog4j2-java (2.19.0-2) ... 911s Setting up libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 911s Setting up libhtsjdk-java (4.1.0+dfsg-2) ... 911s Setting up libguava-java (32.0.1-1) ... 911s Setting up adwaita-icon-theme (47.0-1) ... 911s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 911s Setting up libprotobuf-java (3.21.12-9ubuntu1) ... 911s Setting up liberror-prone-java (2.18.0-1) ... 911s Setting up humanity-icon-theme (0.6.16) ... 912s Setting up ubuntu-mono (24.04-0ubuntu1) ... 912s Processing triggers for man-db (2.12.1-3) ... 913s Processing triggers for libglib2.0-0t64:arm64 (2.82.1-0ubuntu1) ... 913s Setting up libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 913s Processing triggers for libc-bin (2.40-1ubuntu3) ... 913s Processing triggers for ca-certificates-java (20240118) ... 914s Adding debian:ACCVRAIZ1.pem 914s Adding debian:AC_RAIZ_FNMT-RCM.pem 914s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 914s Adding debian:ANF_Secure_Server_Root_CA.pem 914s Adding debian:Actalis_Authentication_Root_CA.pem 914s Adding debian:AffirmTrust_Commercial.pem 914s Adding debian:AffirmTrust_Networking.pem 914s Adding debian:AffirmTrust_Premium.pem 914s Adding debian:AffirmTrust_Premium_ECC.pem 914s Adding debian:Amazon_Root_CA_1.pem 914s Adding debian:Amazon_Root_CA_2.pem 914s Adding debian:Amazon_Root_CA_3.pem 914s Adding debian:Amazon_Root_CA_4.pem 914s Adding debian:Atos_TrustedRoot_2011.pem 914s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 914s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 914s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 914s Adding debian:BJCA_Global_Root_CA1.pem 914s Adding debian:BJCA_Global_Root_CA2.pem 914s Adding debian:Baltimore_CyberTrust_Root.pem 914s Adding debian:Buypass_Class_2_Root_CA.pem 914s Adding debian:Buypass_Class_3_Root_CA.pem 914s Adding debian:CA_Disig_Root_R2.pem 914s Adding debian:CFCA_EV_ROOT.pem 914s Adding debian:COMODO_Certification_Authority.pem 914s Adding debian:COMODO_ECC_Certification_Authority.pem 914s Adding debian:COMODO_RSA_Certification_Authority.pem 914s Adding debian:Certainly_Root_E1.pem 914s Adding debian:Certainly_Root_R1.pem 914s Adding debian:Certigna.pem 914s Adding debian:Certigna_Root_CA.pem 914s Adding debian:Certum_EC-384_CA.pem 914s Adding debian:Certum_Trusted_Network_CA.pem 914s Adding debian:Certum_Trusted_Network_CA_2.pem 914s Adding debian:Certum_Trusted_Root_CA.pem 914s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 914s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 914s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 914s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 914s Adding debian:Comodo_AAA_Services_root.pem 914s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 914s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 914s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 914s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 914s Adding debian:DigiCert_Assured_ID_Root_CA.pem 914s Adding debian:DigiCert_Assured_ID_Root_G2.pem 914s Adding debian:DigiCert_Assured_ID_Root_G3.pem 914s Adding debian:DigiCert_Global_Root_CA.pem 914s Adding debian:DigiCert_Global_Root_G2.pem 914s Adding debian:DigiCert_Global_Root_G3.pem 914s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 914s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 914s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 914s Adding debian:DigiCert_Trusted_Root_G4.pem 914s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 914s Adding debian:Entrust_Root_Certification_Authority.pem 914s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 914s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 914s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 914s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 914s Adding debian:GLOBALTRUST_2020.pem 914s Adding debian:GTS_Root_R1.pem 914s Adding debian:GTS_Root_R2.pem 914s Adding debian:GTS_Root_R3.pem 914s Adding debian:GTS_Root_R4.pem 914s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 914s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 914s Adding debian:GlobalSign_Root_CA.pem 914s Adding debian:GlobalSign_Root_CA_-_R3.pem 914s Adding debian:GlobalSign_Root_CA_-_R6.pem 914s Adding debian:GlobalSign_Root_E46.pem 914s Adding debian:GlobalSign_Root_R46.pem 914s Adding debian:Go_Daddy_Class_2_CA.pem 914s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 914s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 914s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 914s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 914s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 914s Adding debian:HiPKI_Root_CA_-_G1.pem 914s Adding debian:Hongkong_Post_Root_CA_3.pem 914s Adding debian:ISRG_Root_X1.pem 914s Adding debian:ISRG_Root_X2.pem 914s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 914s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 914s Adding debian:Izenpe.com.pem 914s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 914s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 914s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 914s Adding debian:NAVER_Global_Root_Certification_Authority.pem 914s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 914s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 914s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 914s Adding debian:QuoVadis_Root_CA_1_G3.pem 914s Adding debian:QuoVadis_Root_CA_2.pem 914s Adding debian:QuoVadis_Root_CA_2_G3.pem 914s Adding debian:QuoVadis_Root_CA_3.pem 914s Adding debian:QuoVadis_Root_CA_3_G3.pem 914s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 914s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 914s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 914s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 914s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 914s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 914s Adding debian:SZAFIR_ROOT_CA2.pem 914s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 914s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 914s Adding debian:SecureSign_RootCA11.pem 914s Adding debian:SecureTrust_CA.pem 914s Adding debian:Secure_Global_CA.pem 914s Adding debian:Security_Communication_ECC_RootCA1.pem 914s Adding debian:Security_Communication_RootCA2.pem 914s Adding debian:Security_Communication_RootCA3.pem 914s Adding debian:Security_Communication_Root_CA.pem 914s Adding debian:Starfield_Class_2_CA.pem 914s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 914s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 914s Adding debian:SwissSign_Gold_CA_-_G2.pem 914s Adding debian:SwissSign_Silver_CA_-_G2.pem 914s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 914s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 914s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 914s Adding debian:TWCA_Global_Root_CA.pem 914s Adding debian:TWCA_Root_Certification_Authority.pem 914s Adding debian:TeliaSonera_Root_CA_v1.pem 914s Adding debian:Telia_Root_CA_v2.pem 914s Adding debian:TrustAsia_Global_Root_CA_G3.pem 914s Adding debian:TrustAsia_Global_Root_CA_G4.pem 914s Adding debian:Trustwave_Global_Certification_Authority.pem 914s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 914s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 914s Adding debian:TunTrust_Root_CA.pem 914s Adding debian:UCA_Extended_Validation_Root.pem 914s Adding debian:UCA_Global_G2_Root.pem 914s Adding debian:USERTrust_ECC_Certification_Authority.pem 914s Adding debian:USERTrust_RSA_Certification_Authority.pem 914s Adding debian:XRamp_Global_CA_Root.pem 914s Adding debian:certSIGN_ROOT_CA.pem 914s Adding debian:certSIGN_Root_CA_G2.pem 914s Adding debian:e-Szigno_Root_CA_2017.pem 914s Adding debian:ePKI_Root_Certification_Authority.pem 914s Adding debian:emSign_ECC_Root_CA_-_C3.pem 914s Adding debian:emSign_ECC_Root_CA_-_G3.pem 914s Adding debian:emSign_Root_CA_-_C1.pem 914s Adding debian:emSign_Root_CA_-_G1.pem 914s Adding debian:vTrus_ECC_Root_CA.pem 914s Adding debian:vTrus_Root_CA.pem 914s done. 914s Setting up openjdk-21-jre:arm64 (21.0.5+11-1) ... 914s Setting up ant (1.10.14-1) ... 914s Setting up default-jre-headless (2:1.21-76) ... 914s Setting up default-jre (2:1.21-76) ... 914s Setting up libjsap-java (2.1-5) ... 914s Setting up libdsiutils-java (2.7.3+dfsg-1) ... 914s Setting up libicb-utils-java (2.0.1+git20161002.afee1d9-5) ... 914s Setting up igv (2.17.3+dfsg-1) ... 914s Setting up autopkgtest-satdep (0) ... 922s (Reading database ... 95439 files and directories currently installed.) 922s Removing autopkgtest-satdep (0) ... 928s autopkgtest [19:19:09]: test command1: java -cp /usr/share/java/igv.jar org.broad.igv.tools.IgvTools index src/test/resources/htsjdk/samtools/example.bam 928s autopkgtest [19:19:09]: test command1: [----------------------- 928s Done 929s autopkgtest [19:19:10]: test command1: -----------------------] 929s command1 PASS 929s autopkgtest [19:19:10]: test command1: - - - - - - - - - - results - - - - - - - - - - 929s autopkgtest [19:19:10]: test picard-tools-run-unit-test: preparing testbed 1010s autopkgtest [19:20:31]: testbed dpkg architecture: arm64 1010s autopkgtest [19:20:31]: testbed apt version: 2.9.8 1010s autopkgtest [19:20:31]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1011s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 1012s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [183 kB] 1012s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 1012s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [41.7 kB] 1012s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2689 kB] 1012s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [241 kB] 1012s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 1012s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [1982 kB] 1012s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [34.8 kB] 1013s Fetched 5303 kB in 1s (4149 kB/s) 1013s Reading package lists... 1016s Reading package lists... 1016s Building dependency tree... 1016s Reading state information... 1017s Calculating upgrade... 1017s The following packages will be upgraded: 1017s libevdev2 libftdi1-2 libinih1 nano python3-lazr.uri 1017s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1017s Need to get 374 kB of archives. 1017s After this operation, 17.4 kB of additional disk space will be used. 1017s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libevdev2 arm64 1.13.3+dfsg-1 [36.0 kB] 1018s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 nano arm64 8.2-1 [289 kB] 1018s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libftdi1-2 arm64 1.5-7 [28.4 kB] 1018s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libinih1 arm64 58-1ubuntu1 [7412 B] 1018s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lazr.uri all 1.0.6-4 [13.6 kB] 1018s Fetched 374 kB in 0s (897 kB/s) 1019s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 1019s Preparing to unpack .../libevdev2_1.13.3+dfsg-1_arm64.deb ... 1019s Unpacking libevdev2:arm64 (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 1019s Preparing to unpack .../archives/nano_8.2-1_arm64.deb ... 1019s Unpacking nano (8.2-1) over (8.1-1) ... 1019s Preparing to unpack .../libftdi1-2_1.5-7_arm64.deb ... 1019s Unpacking libftdi1-2:arm64 (1.5-7) over (1.5-6build5) ... 1019s Preparing to unpack .../libinih1_58-1ubuntu1_arm64.deb ... 1019s Unpacking libinih1:arm64 (58-1ubuntu1) over (55-1ubuntu2) ... 1019s Preparing to unpack .../python3-lazr.uri_1.0.6-4_all.deb ... 1019s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 1019s Setting up libinih1:arm64 (58-1ubuntu1) ... 1019s Setting up python3-lazr.uri (1.0.6-4) ... 1019s Setting up libftdi1-2:arm64 (1.5-7) ... 1019s Setting up nano (8.2-1) ... 1019s Setting up libevdev2:arm64 (1.13.3+dfsg-1) ... 1019s Processing triggers for man-db (2.12.1-3) ... 1020s Processing triggers for install-info (7.1.1-1) ... 1020s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1020s Reading package lists... 1021s Building dependency tree... 1021s Reading state information... 1021s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1022s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 1022s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 1022s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 1022s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 1023s Reading package lists... 1023s Reading package lists... 1023s Building dependency tree... 1023s Reading state information... 1024s Calculating upgrade... 1024s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1024s Reading package lists... 1025s Building dependency tree... 1025s Reading state information... 1026s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1031s Reading package lists... 1031s Building dependency tree... 1031s Reading state information... 1032s Starting pkgProblemResolver with broken count: 0 1032s Starting 2 pkgProblemResolver with broken count: 0 1032s Done 1032s The following additional packages will be installed: 1032s adwaita-icon-theme at-spi2-common ca-certificates-java 1032s dconf-gsettings-backend dconf-service default-jre default-jre-headless 1032s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 1032s gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme java-common 1032s libapache-pom-java libasound2-data libasound2t64 libatk-bridge2.0-0t64 1032s libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data 1032s libavahi-common3 libbarclay-java libcairo-gobject2 libcairo2 libcolord2 1032s libcommons-codec-java libcommons-compress-java libcommons-io-java 1032s libcommons-jexl2-java libcommons-lang3-java libcommons-logging-java 1032s libcommons-math3-java libcommons-parent-java libcups2t64 libdatrie1 1032s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 libepoxy0 libfontconfig1 1032s libfreemarker-java libgatk-native-bindings-java libgbm1 libgdk-pixbuf-2.0-0 1032s libgdk-pixbuf2.0-common libgif7 libgkl-java libgl1 libgl1-mesa-dri 1032s libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgoogle-gson-java 1032s libgraphite2-3 libgtk-3-0t64 libgtk-3-common libharfbuzz0b libhtsjdk-java 1032s libhttpclient-java libhttpcore-java libjbig0 libjoptsimple-java 1032s libjpeg-turbo8 libjpeg8 liblcms2-2 liblerc4 liblightcouch-java 1032s liblog4j2-java libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 1032s libmjson-java libmongodb-java libncbi-ngs3 libncbi-vdb3 libngs-java 1032s libngs-jni libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 1032s libpicard-java libpixman-1-0 librhino-java libsharpyuv0 libslf4j-java 1032s libsnappy-java libsnappy-jni libsnappy1v5 libthai-data libthai0 libtiff6 1032s libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 1032s libwayland-server0 libwebp7 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 1032s libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 1032s libxcb-sync1 libxcb-xfixes0 libxcomposite1 libxcursor1 libxdamage1 1032s libxfixes3 libxi6 libxinerama1 libxrandr2 libxrender1 libxshmfence1 libxtst6 1032s libxxf86vm1 mesa-libgallium ncbi-vdb-data openjdk-21-jre 1032s openjdk-21-jre-headless picard-tools ubuntu-mono x11-common 1032s Suggested packages: 1032s alsa-utils libasound2-plugins colord libasm-java libxz-java 1032s libavalon-framework-java libexcalibur-logkit-java liblog4j1.2-java 1032s cups-common jython libdom4j-java libjaxen-java libjdom1-java libxalan2-java 1032s libgoogle-gson-java-doc gvfs libjoptsimple-java-doc liblcms2-utils 1032s libactivation-java libcommons-csv-java libconversant-disruptor-java 1032s libdisruptor-java libgeronimo-jms-1.1-spec-java 1032s libjackson2-dataformat-xml-java libjackson2-dataformat-yaml libjansi-java 1032s libjctools-java libjeromq-java libmail-java libwoodstox-java libngs-java-doc 1032s pcscd rhino libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic 1032s fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic 1032s Recommended packages: 1032s librsvg2-common alsa-ucm-conf alsa-topology-conf at-spi2-core 1032s libgdk-pixbuf2.0-bin libgkl-jni libgl1-amber-dri libgtk-3-bin r-base-core 1032s mesa-vulkan-drivers | vulkan-icd libatk-wrapper-java-jni fonts-dejavu-extra 1033s The following NEW packages will be installed: 1033s adwaita-icon-theme at-spi2-common autopkgtest-satdep ca-certificates-java 1033s dconf-gsettings-backend dconf-service default-jre default-jre-headless 1033s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 1033s gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme java-common 1033s libapache-pom-java libasound2-data libasound2t64 libatk-bridge2.0-0t64 1033s libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data 1033s libavahi-common3 libbarclay-java libcairo-gobject2 libcairo2 libcolord2 1033s libcommons-codec-java libcommons-compress-java libcommons-io-java 1033s libcommons-jexl2-java libcommons-lang3-java libcommons-logging-java 1033s libcommons-math3-java libcommons-parent-java libcups2t64 libdatrie1 1033s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 libepoxy0 libfontconfig1 1033s libfreemarker-java libgatk-native-bindings-java libgbm1 libgdk-pixbuf-2.0-0 1033s libgdk-pixbuf2.0-common libgif7 libgkl-java libgl1 libgl1-mesa-dri 1033s libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgoogle-gson-java 1033s libgraphite2-3 libgtk-3-0t64 libgtk-3-common libharfbuzz0b libhtsjdk-java 1033s libhttpclient-java libhttpcore-java libjbig0 libjoptsimple-java 1033s libjpeg-turbo8 libjpeg8 liblcms2-2 liblerc4 liblightcouch-java 1033s liblog4j2-java libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 1033s libmjson-java libmongodb-java libncbi-ngs3 libncbi-vdb3 libngs-java 1033s libngs-jni libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcsclite1 1033s libpicard-java libpixman-1-0 librhino-java libsharpyuv0 libslf4j-java 1033s libsnappy-java libsnappy-jni libsnappy1v5 libthai-data libthai0 libtiff6 1033s libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 1033s libwayland-server0 libwebp7 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 1033s libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 1033s libxcb-sync1 libxcb-xfixes0 libxcomposite1 libxcursor1 libxdamage1 1033s libxfixes3 libxi6 libxinerama1 libxrandr2 libxrender1 libxshmfence1 libxtst6 1033s libxxf86vm1 mesa-libgallium ncbi-vdb-data openjdk-21-jre 1033s openjdk-21-jre-headless picard-tools ubuntu-mono x11-common 1033s 0 upgraded, 132 newly installed, 0 to remove and 0 not upgraded. 1033s Need to get 88.2 MB/88.2 MB of archives. 1033s After this operation, 352 MB of additional disk space will be used. 1033s Get:1 /tmp/autopkgtest.d7OWAi/7-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [704 B] 1033s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 1033s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 1033s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 1033s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.21-1 [46.2 kB] 1033s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 1033s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 1033s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 1033s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 1033s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 1033s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1 [145 kB] 1033s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 gtk-update-icon-cache arm64 4.16.2+ds-2 [51.1 kB] 1033s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 hicolor-icon-theme all 0.18-1 [13.5 kB] 1033s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 humanity-icon-theme all 0.6.16 [1282 kB] 1033s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 ubuntu-mono all 24.04-0ubuntu1 [151 kB] 1033s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 adwaita-icon-theme all 47.0-1 [525 kB] 1033s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 at-spi2-common all 2.54.0-1 [8774 B] 1033s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 ca-certificates-java all 20240118 [11.6 kB] 1033s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libdconf1 arm64 0.40.0-4build2 [39.8 kB] 1033s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-service arm64 0.40.0-4build2 [26.9 kB] 1033s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-gsettings-backend arm64 0.40.0-4build2 [22.0 kB] 1033s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 java-common all 0.76 [6852 B] 1033s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.14-2build1 [161 kB] 1033s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcsclite1 arm64 2.3.0-1 [24.4 kB] 1033s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre-headless arm64 21.0.5+11-1 [45.7 MB] 1035s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre-headless arm64 2:1.21-76 [3176 B] 1035s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [55.0 kB] 1035s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 1035s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [80.2 kB] 1035s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [66.6 kB] 1035s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 1035s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 1035s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 1035s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 1035s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.42.2-1build1 [204 kB] 1035s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 1035s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 1035s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 1035s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 1035s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo-gobject2 arm64 1.18.2-2 [127 kB] 1035s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolord2 arm64 1.4.7-1build2 [149 kB] 1035s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common-data arm64 0.8-13ubuntu6 [29.6 kB] 1035s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common3 arm64 0.8-13ubuntu6 [23.3 kB] 1035s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-client3 arm64 0.8-13ubuntu6 [27.2 kB] 1035s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libcups2t64 arm64 2.4.10-1ubuntu2 [271 kB] 1035s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libepoxy0 arm64 1.5.10-1build1 [240 kB] 1035s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 1035s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 9.0.0-1 [486 kB] 1035s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 1035s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 1035s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 1035s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 1035s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-2 [233 kB] 1035s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-2 [48.8 kB] 1035s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-2 [27.5 kB] 1035s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB] 1035s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-cursor0 arm64 1.23.0-1 [10.6 kB] 1035s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-egl1 arm64 1.23.0-1 [5636 B] 1035s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcomposite1 arm64 1:0.4.5-1build3 [6336 B] 1035s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB] 1035s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcursor1 arm64 1:1.2.2-1 [21.2 kB] 1035s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libxdamage1 arm64 1:1.1.6-1build1 [6236 B] 1035s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libxinerama1 arm64 2:1.1.4-3build1 [6394 B] 1035s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrandr2 arm64 2:1.5.4-1 [19.6 kB] 1035s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-common all 3.24.43-3ubuntu2 [1202 kB] 1035s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-0t64 arm64 3.24.43-3ubuntu2 [2898 kB] 1035s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB] 1035s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB] 1035s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.7-1build1 [7870 B] 1035s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B] 1035s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B] 1035s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB] 1035s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B] 1035s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB] 1035s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B] 1035s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB] 1035s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B] 1035s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B] 1035s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.122-1 [20.9 kB] 1035s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.122-1 [20.8 kB] 1035s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB] 1036s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.290.0-1 [153 kB] 1036s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB] 1036s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB] 1036s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB] 1036s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB] 1036s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB] 1036s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB] 1036s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2-data all 1.2.12-1 [21.0 kB] 1036s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2t64 arm64 1.2.12-1 [384 kB] 1036s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 1036s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 1036s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libxtst6 arm64 2:1.2.3-1.1build1 [13.0 kB] 1036s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre arm64 21.0.5+11-1 [221 kB] 1036s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre arm64 2:1.21-76 [918 B] 1036s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapache-pom-java all 33-2 [5874 B] 1036s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-parent-java all 56-1 [10.7 kB] 1036s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-lang3-java all 3.14.0-1 [586 kB] 1036s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfreemarker-java all 2.3.32-2 [1542 kB] 1036s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgoogle-gson-java all 2.10.1-1 [252 kB] 1036s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjoptsimple-java all 5.0.4-4 [73.1 kB] 1036s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-codec-java all 1.16.0-1 [306 kB] 1036s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 1036s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhttpcore-java all 4.4.16-1 [612 kB] 1036s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhttpclient-java all 4.5.14-1 [1241 kB] 1036s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblightcouch-java all 0.2.0-1 [74.2 kB] 1036s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmongodb-java all 3.6.3-2 [1899 kB] 1037s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 libslf4j-java all 1.7.32-1 [141 kB] 1037s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblog4j2-java all 2.19.0-2 [2294 kB] 1037s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 libbarclay-java all 5.0.0+dfsg-1 [108 kB] 1037s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-compress-java all 1.25.0-1 [612 kB] 1037s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-io-java all 2.16.1-1 [451 kB] 1037s Get:113 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-jexl2-java all 2.1.1-6 [250 kB] 1037s Get:114 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-math3-java all 3.6.1-3 [2016 kB] 1037s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgatk-native-bindings-java all 1.0.0+dfsg-2 [8014 B] 1037s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmjson-java all 1.4.0-3 [60.4 kB] 1037s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedcrypto7t64 arm64 2.28.8-1 [209 kB] 1037s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedx509-1t64 arm64 2.28.8-1 [47.2 kB] 1037s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedtls14t64 arm64 2.28.8-1 [82.2 kB] 1037s Get:120 http://ftpmaster.internal/ubuntu plucky/universe arm64 ncbi-vdb-data all 3.0.2+dfsg-2build2 [67.5 kB] 1037s Get:121 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-vdb3 arm64 3.0.2+dfsg-2build2 [1143 kB] 1037s Get:122 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-ngs3 arm64 3.0.3+dfsg-9ubuntu1 [145 kB] 1037s Get:123 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-jni arm64 3.0.3+dfsg-9ubuntu1 [4844 B] 1037s Get:124 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-java arm64 3.0.3+dfsg-9ubuntu1 [91.1 kB] 1037s Get:125 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 librhino-java all 1.7.15-1 [1354 kB] 1037s Get:126 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 1037s Get:127 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-jni arm64 1.1.10.5-2 [6618 B] 1037s Get:128 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-java all 1.1.10.5-2 [83.7 kB] 1037s Get:129 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtsjdk-java all 4.1.0+dfsg-2 [1823 kB] 1037s Get:130 http://ftpmaster.internal/ubuntu plucky/universe arm64 libgkl-java all 0.8.11+dfsg-2build1 [24.9 kB] 1037s Get:131 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpicard-java all 3.1.1+dfsg-1 [1731 kB] 1037s Get:132 http://ftpmaster.internal/ubuntu plucky/universe arm64 picard-tools all 3.1.1+dfsg-1 [308 kB] 1038s Fetched 88.2 MB in 4s (19.9 MB/s) 1038s Selecting previously unselected package libgdk-pixbuf2.0-common. 1038s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 1038s Preparing to unpack .../000-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 1038s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 1038s Selecting previously unselected package libjpeg-turbo8:arm64. 1038s Preparing to unpack .../001-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 1038s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 1038s Selecting previously unselected package libjpeg8:arm64. 1038s Preparing to unpack .../002-libjpeg8_8c-2ubuntu11_arm64.deb ... 1038s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 1038s Selecting previously unselected package libdeflate0:arm64. 1038s Preparing to unpack .../003-libdeflate0_1.21-1_arm64.deb ... 1038s Unpacking libdeflate0:arm64 (1.21-1) ... 1038s Selecting previously unselected package libjbig0:arm64. 1038s Preparing to unpack .../004-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 1038s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 1038s Selecting previously unselected package liblerc4:arm64. 1038s Preparing to unpack .../005-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 1038s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 1038s Selecting previously unselected package libsharpyuv0:arm64. 1038s Preparing to unpack .../006-libsharpyuv0_1.4.0-0.1_arm64.deb ... 1038s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 1038s Selecting previously unselected package libwebp7:arm64. 1038s Preparing to unpack .../007-libwebp7_1.4.0-0.1_arm64.deb ... 1038s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 1038s Selecting previously unselected package libtiff6:arm64. 1038s Preparing to unpack .../008-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 1038s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 1038s Selecting previously unselected package libgdk-pixbuf-2.0-0:arm64. 1038s Preparing to unpack .../009-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_arm64.deb ... 1038s Unpacking libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 1038s Selecting previously unselected package gtk-update-icon-cache. 1038s Preparing to unpack .../010-gtk-update-icon-cache_4.16.2+ds-2_arm64.deb ... 1038s No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. 1038s No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. 1038s Unpacking gtk-update-icon-cache (4.16.2+ds-2) ... 1038s Selecting previously unselected package hicolor-icon-theme. 1038s Preparing to unpack .../011-hicolor-icon-theme_0.18-1_all.deb ... 1038s Unpacking hicolor-icon-theme (0.18-1) ... 1039s Selecting previously unselected package humanity-icon-theme. 1039s Preparing to unpack .../012-humanity-icon-theme_0.6.16_all.deb ... 1039s Unpacking humanity-icon-theme (0.6.16) ... 1039s Selecting previously unselected package ubuntu-mono. 1039s Preparing to unpack .../013-ubuntu-mono_24.04-0ubuntu1_all.deb ... 1039s Unpacking ubuntu-mono (24.04-0ubuntu1) ... 1039s Selecting previously unselected package adwaita-icon-theme. 1040s Preparing to unpack .../014-adwaita-icon-theme_47.0-1_all.deb ... 1040s Unpacking adwaita-icon-theme (47.0-1) ... 1040s Selecting previously unselected package at-spi2-common. 1040s Preparing to unpack .../015-at-spi2-common_2.54.0-1_all.deb ... 1040s Unpacking at-spi2-common (2.54.0-1) ... 1040s Selecting previously unselected package ca-certificates-java. 1040s Preparing to unpack .../016-ca-certificates-java_20240118_all.deb ... 1040s Unpacking ca-certificates-java (20240118) ... 1040s Selecting previously unselected package libdconf1:arm64. 1040s Preparing to unpack .../017-libdconf1_0.40.0-4build2_arm64.deb ... 1040s Unpacking libdconf1:arm64 (0.40.0-4build2) ... 1040s Selecting previously unselected package dconf-service. 1040s Preparing to unpack .../018-dconf-service_0.40.0-4build2_arm64.deb ... 1040s Unpacking dconf-service (0.40.0-4build2) ... 1040s Selecting previously unselected package dconf-gsettings-backend:arm64. 1040s Preparing to unpack .../019-dconf-gsettings-backend_0.40.0-4build2_arm64.deb ... 1040s Unpacking dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 1040s Selecting previously unselected package java-common. 1040s Preparing to unpack .../020-java-common_0.76_all.deb ... 1040s Unpacking java-common (0.76) ... 1040s Selecting previously unselected package liblcms2-2:arm64. 1040s Preparing to unpack .../021-liblcms2-2_2.14-2build1_arm64.deb ... 1040s Unpacking liblcms2-2:arm64 (2.14-2build1) ... 1040s Selecting previously unselected package libpcsclite1:arm64. 1040s Preparing to unpack .../022-libpcsclite1_2.3.0-1_arm64.deb ... 1040s Unpacking libpcsclite1:arm64 (2.3.0-1) ... 1040s Selecting previously unselected package openjdk-21-jre-headless:arm64. 1040s Preparing to unpack .../023-openjdk-21-jre-headless_21.0.5+11-1_arm64.deb ... 1040s Unpacking openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 1041s Selecting previously unselected package default-jre-headless. 1041s Preparing to unpack .../024-default-jre-headless_2%3a1.21-76_arm64.deb ... 1041s Unpacking default-jre-headless (2:1.21-76) ... 1041s Selecting previously unselected package libatk1.0-0t64:arm64. 1041s Preparing to unpack .../025-libatk1.0-0t64_2.54.0-1_arm64.deb ... 1041s Unpacking libatk1.0-0t64:arm64 (2.54.0-1) ... 1042s Selecting previously unselected package libxi6:arm64. 1042s Preparing to unpack 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unpack .../046-libharfbuzz0b_9.0.0-1_arm64.deb ... 1043s Unpacking libharfbuzz0b:arm64 (9.0.0-1) ... 1043s Selecting previously unselected package fontconfig. 1043s Preparing to unpack .../047-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 1043s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 1043s Selecting previously unselected package libthai-data. 1043s Preparing to unpack .../048-libthai-data_0.1.29-2build1_all.deb ... 1043s Unpacking libthai-data (0.1.29-2build1) ... 1043s Selecting previously unselected package libdatrie1:arm64. 1043s Preparing to unpack .../049-libdatrie1_0.2.13-3build1_arm64.deb ... 1043s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 1043s Selecting previously unselected package libthai0:arm64. 1043s Preparing to unpack .../050-libthai0_0.1.29-2build1_arm64.deb ... 1043s Unpacking libthai0:arm64 (0.1.29-2build1) ... 1043s Selecting previously unselected package libpango-1.0-0:arm64. 1043s Preparing to unpack .../051-libpango-1.0-0_1.54.0+ds-2_arm64.deb ... 1043s 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... 1046s Selecting previously unselected package libbarclay-java. 1046s Preparing to unpack .../108-libbarclay-java_5.0.0+dfsg-1_all.deb ... 1046s Unpacking libbarclay-java (5.0.0+dfsg-1) ... 1046s Selecting previously unselected package libcommons-compress-java. 1046s Preparing to unpack .../109-libcommons-compress-java_1.25.0-1_all.deb ... 1046s Unpacking libcommons-compress-java (1.25.0-1) ... 1046s Selecting previously unselected package libcommons-io-java. 1046s Preparing to unpack .../110-libcommons-io-java_2.16.1-1_all.deb ... 1046s Unpacking libcommons-io-java (2.16.1-1) ... 1046s Selecting previously unselected package libcommons-jexl2-java. 1046s Preparing to unpack .../111-libcommons-jexl2-java_2.1.1-6_all.deb ... 1046s Unpacking libcommons-jexl2-java (2.1.1-6) ... 1046s Selecting previously unselected package libcommons-math3-java. 1046s Preparing to unpack .../112-libcommons-math3-java_3.6.1-3_all.deb ... 1046s Unpacking libcommons-math3-java (3.6.1-3) ... 1046s Selecting previously unselected package libgatk-native-bindings-java. 1046s Preparing to unpack .../113-libgatk-native-bindings-java_1.0.0+dfsg-2_all.deb ... 1046s Unpacking libgatk-native-bindings-java (1.0.0+dfsg-2) ... 1046s Selecting previously unselected package libmjson-java. 1046s Preparing to unpack .../114-libmjson-java_1.4.0-3_all.deb ... 1046s Unpacking libmjson-java (1.4.0-3) ... 1046s Selecting previously unselected package libmbedcrypto7t64:arm64. 1046s Preparing to unpack .../115-libmbedcrypto7t64_2.28.8-1_arm64.deb ... 1046s Unpacking libmbedcrypto7t64:arm64 (2.28.8-1) ... 1046s Selecting previously unselected package libmbedx509-1t64:arm64. 1047s Preparing to unpack .../116-libmbedx509-1t64_2.28.8-1_arm64.deb ... 1047s Unpacking libmbedx509-1t64:arm64 (2.28.8-1) ... 1047s Selecting previously unselected package libmbedtls14t64:arm64. 1047s Preparing to unpack .../117-libmbedtls14t64_2.28.8-1_arm64.deb ... 1047s Unpacking libmbedtls14t64:arm64 (2.28.8-1) ... 1047s Selecting previously unselected package ncbi-vdb-data. 1047s Preparing to unpack .../118-ncbi-vdb-data_3.0.2+dfsg-2build2_all.deb ... 1047s Unpacking ncbi-vdb-data (3.0.2+dfsg-2build2) ... 1047s Selecting previously unselected package libncbi-vdb3:arm64. 1047s Preparing to unpack .../119-libncbi-vdb3_3.0.2+dfsg-2build2_arm64.deb ... 1047s Unpacking libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 1047s Selecting previously unselected package libncbi-ngs3:arm64. 1047s Preparing to unpack .../120-libncbi-ngs3_3.0.3+dfsg-9ubuntu1_arm64.deb ... 1047s Unpacking libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 1047s Selecting previously unselected package libngs-jni:arm64. 1047s Preparing to unpack .../121-libngs-jni_3.0.3+dfsg-9ubuntu1_arm64.deb ... 1047s Unpacking libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 1047s Selecting previously unselected package libngs-java:arm64. 1047s Preparing to unpack .../122-libngs-java_3.0.3+dfsg-9ubuntu1_arm64.deb ... 1047s Unpacking libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 1047s Selecting previously unselected package librhino-java. 1047s Preparing to unpack .../123-librhino-java_1.7.15-1_all.deb ... 1047s Unpacking librhino-java (1.7.15-1) ... 1047s Selecting previously unselected package libsnappy1v5:arm64. 1047s Preparing to unpack .../124-libsnappy1v5_1.2.1-1_arm64.deb ... 1047s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 1047s Selecting previously unselected package libsnappy-jni. 1047s Preparing to unpack .../125-libsnappy-jni_1.1.10.5-2_arm64.deb ... 1047s Unpacking libsnappy-jni (1.1.10.5-2) ... 1047s Selecting previously unselected package libsnappy-java. 1047s Preparing to unpack .../126-libsnappy-java_1.1.10.5-2_all.deb ... 1047s Unpacking libsnappy-java (1.1.10.5-2) ... 1047s Selecting previously unselected package libhtsjdk-java. 1047s Preparing to unpack .../127-libhtsjdk-java_4.1.0+dfsg-2_all.deb ... 1047s Unpacking libhtsjdk-java (4.1.0+dfsg-2) ... 1047s Selecting previously unselected package libgkl-java. 1047s Preparing to unpack .../128-libgkl-java_0.8.11+dfsg-2build1_all.deb ... 1047s Unpacking libgkl-java (0.8.11+dfsg-2build1) ... 1047s Selecting previously unselected package libpicard-java. 1047s Preparing to unpack .../129-libpicard-java_3.1.1+dfsg-1_all.deb ... 1047s Unpacking libpicard-java (3.1.1+dfsg-1) ... 1047s Selecting previously unselected package picard-tools. 1047s Preparing to unpack .../130-picard-tools_3.1.1+dfsg-1_all.deb ... 1047s Unpacking picard-tools (3.1.1+dfsg-1) ... 1047s Selecting previously unselected package autopkgtest-satdep. 1047s Preparing to unpack .../131-7-autopkgtest-satdep.deb ... 1047s Unpacking autopkgtest-satdep (0) ... 1047s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 1047s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ... 1047s Setting up liblcms2-2:arm64 (2.14-2build1) ... 1047s Setting up libpixman-1-0:arm64 (0.42.2-1build1) ... 1047s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 1047s Setting up libwayland-server0:arm64 (1.23.0-1) ... 1047s Setting up libx11-xcb1:arm64 (2:1.8.7-1build1) ... 1047s Setting up libslf4j-java (1.7.32-1) ... 1047s Setting up libxdamage1:arm64 (1:1.1.6-1build1) ... 1047s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ... 1047s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 1047s Setting up hicolor-icon-theme (0.18-1) ... 1047s Setting up libxi6:arm64 (2:1.8.2-1) ... 1047s Setting up libgatk-native-bindings-java (1.0.0+dfsg-2) ... 1047s Setting up libmbedcrypto7t64:arm64 (2.28.8-1) ... 1047s Setting up java-common (0.76) ... 1047s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 1047s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 1047s Setting up libxcb-render0:arm64 (1.17.0-2) ... 1047s Setting up libdrm-radeon1:arm64 (2.4.122-1) ... 1047s Setting up libglvnd0:arm64 (1.7.0-1build1) ... 1047s Setting up libgoogle-gson-java (2.10.1-1) ... 1047s Setting up libmjson-java (1.4.0-3) ... 1047s Setting up libxcb-glx0:arm64 (1.17.0-2) ... 1047s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 1047s Setting up x11-common (1:7.7+23ubuntu3) ... 1048s Setting up libdeflate0:arm64 (1.21-1) ... 1048s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 1048s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 1048s Setting up libcolord2:arm64 (1.4.7-1build2) ... 1048s Setting up libxxf86vm1:arm64 (1:1.1.4-1build4) ... 1048s Setting up libsnappy1v5:arm64 (1.2.1-1) ... 1048s Setting up libxcb-present0:arm64 (1.17.0-2) ... 1048s Setting up libdconf1:arm64 (0.40.0-4build2) ... 1048s Setting up libasound2-data (1.2.12-1) ... 1048s Setting up librhino-java (1.7.15-1) ... 1048s Setting up libasound2t64:arm64 (1.2.12-1) ... 1048s Setting up libepoxy0:arm64 (1.5.10-1build1) ... 1048s Setting up libxfixes3:arm64 (1:6.0.0-2build1) ... 1048s Setting up libxcb-sync1:arm64 (1.17.0-2) ... 1048s Setting up libapache-pom-java (33-2) ... 1048s Setting up libavahi-common-data:arm64 (0.8-13ubuntu6) ... 1048s Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... 1048s Setting up libxinerama1:arm64 (2:1.1.4-3build1) ... 1048s Setting up fonts-dejavu-mono (2.37-8) ... 1048s Setting up libxrandr2:arm64 (2:1.5.4-1) ... 1048s Setting up fonts-dejavu-core (2.37-8) ... 1048s Setting up libpcsclite1:arm64 (2.3.0-1) ... 1048s Setting up libmongodb-java (3.6.3-2) ... 1048s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 1048s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 1048s Setting up libvulkan1:arm64 (1.3.290.0-1) ... 1048s Setting up libwebp7:arm64 (1.4.0-0.1) ... 1048s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ... 1048s Setting up libgif7:arm64 (5.2.2-1ubuntu1) ... 1048s Setting up libfreemarker-java (2.3.32-2) ... 1048s Setting up libxshmfence1:arm64 (1.3-1build5) ... 1048s Setting up at-spi2-common (2.54.0-1) ... 1048s Setting up libxcb-randr0:arm64 (1.17.0-2) ... 1048s Setting up libharfbuzz0b:arm64 (9.0.0-1) ... 1048s Setting up ncbi-vdb-data (3.0.2+dfsg-2build2) ... 1048s Setting up libthai-data (0.1.29-2build1) ... 1048s Setting up libcommons-math3-java (3.6.1-3) ... 1048s Setting up libwayland-egl1:arm64 (1.23.0-1) ... 1048s Setting up libhttpcore-java (4.4.16-1) ... 1048s Setting up libjoptsimple-java (5.0.4-4) ... 1048s Setting up ca-certificates-java (20240118) ... 1048s No JRE found. Skipping Java certificates setup. 1048s Setting up libsnappy-jni (1.1.10.5-2) ... 1048s Setting up libxcomposite1:arm64 (1:0.4.5-1build3) ... 1048s Setting up libdrm-amdgpu1:arm64 (2.4.122-1) ... 1048s Setting up libwayland-client0:arm64 (1.23.0-1) ... 1048s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 1048s Setting up mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 1048s Setting up libmbedx509-1t64:arm64 (2.28.8-1) ... 1048s Setting up libatk1.0-0t64:arm64 (2.54.0-1) ... 1048s Setting up openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 1048s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode 1048s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 1048s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 1048s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 1048s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 1048s Setting up libgbm1:arm64 (24.2.3-1ubuntu1) ... 1048s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 1048s Setting up libxtst6:arm64 (2:1.2.3-1.1build1) ... 1048s Setting up libxcursor1:arm64 (1:1.2.2-1) ... 1048s Setting up libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 1048s Setting up libcommons-parent-java (56-1) ... 1048s Setting up libavahi-common3:arm64 (0.8-13ubuntu6) ... 1048s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 1048s Setting up dconf-service (0.40.0-4build2) ... 1048s Setting up libcommons-jexl2-java (2.1.1-6) ... 1048s Setting up libthai0:arm64 (0.1.29-2build1) ... 1048s Setting up libcommons-lang3-java (3.14.0-1) ... 1048s Setting up libmbedtls14t64:arm64 (2.28.8-1) ... 1048s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 1048s Setting up libwayland-cursor0:arm64 (1.23.0-1) ... 1048s Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 1048s Setting up libsnappy-java (1.1.10.5-2) ... 1048s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 1048s Setting up libcommons-codec-java (1.16.0-1) ... 1048s Setting up libavahi-client3:arm64 (0.8-13ubuntu6) ... 1048s Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 1048s Setting up gtk-update-icon-cache (4.16.2+ds-2) ... 1048s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 1050s Regenerating fonts cache... done. 1050s Setting up libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 1050s Setting up libglx0:arm64 (1.7.0-1build1) ... 1050s Setting up dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 1050s Setting up libcommons-compress-java (1.25.0-1) ... 1050s Setting up libcommons-io-java (2.16.1-1) ... 1050s Setting up libpango-1.0-0:arm64 (1.54.0+ds-2) ... 1050s Setting up libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 1050s Setting up libcairo2:arm64 (1.18.2-2) ... 1050s Setting up libgl1:arm64 (1.7.0-1build1) ... 1050s Setting up libhttpclient-java (4.5.14-1) ... 1050s Setting up liblightcouch-java (0.2.0-1) ... 1050s Setting up libcairo-gobject2:arm64 (1.18.2-2) ... 1050s Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 1050s Setting up libcups2t64:arm64 (2.4.10-1ubuntu2) ... 1050s Setting up libgtk-3-common (3.24.43-3ubuntu2) ... 1050s Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 1050s Setting up libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 1050s Setting up libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 1050s Setting up liblog4j2-java (2.19.0-2) ... 1050s Setting up libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 1050s Setting up libhtsjdk-java (4.1.0+dfsg-2) ... 1050s Setting up libbarclay-java (5.0.0+dfsg-1) ... 1050s Setting up libgkl-java (0.8.11+dfsg-2build1) ... 1050s Setting up libpicard-java (3.1.1+dfsg-1) ... 1050s Setting up adwaita-icon-theme (47.0-1) ... 1050s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 1050s Setting up humanity-icon-theme (0.6.16) ... 1050s Setting up ubuntu-mono (24.04-0ubuntu1) ... 1050s Processing triggers for man-db (2.12.1-3) ... 1051s Processing triggers for libglib2.0-0t64:arm64 (2.82.1-0ubuntu1) ... 1051s Setting up libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 1051s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1051s Processing triggers for ca-certificates-java (20240118) ... 1052s Adding debian:ACCVRAIZ1.pem 1052s Adding debian:AC_RAIZ_FNMT-RCM.pem 1052s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 1052s Adding debian:ANF_Secure_Server_Root_CA.pem 1052s Adding debian:Actalis_Authentication_Root_CA.pem 1052s Adding debian:AffirmTrust_Commercial.pem 1052s Adding debian:AffirmTrust_Networking.pem 1052s Adding debian:AffirmTrust_Premium.pem 1052s Adding debian:AffirmTrust_Premium_ECC.pem 1052s Adding debian:Amazon_Root_CA_1.pem 1052s Adding debian:Amazon_Root_CA_2.pem 1052s Adding debian:Amazon_Root_CA_3.pem 1052s Adding debian:Amazon_Root_CA_4.pem 1052s Adding debian:Atos_TrustedRoot_2011.pem 1052s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 1052s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 1052s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 1052s Adding debian:BJCA_Global_Root_CA1.pem 1052s Adding debian:BJCA_Global_Root_CA2.pem 1052s Adding debian:Baltimore_CyberTrust_Root.pem 1052s Adding debian:Buypass_Class_2_Root_CA.pem 1052s Adding debian:Buypass_Class_3_Root_CA.pem 1052s Adding debian:CA_Disig_Root_R2.pem 1052s Adding debian:CFCA_EV_ROOT.pem 1052s Adding debian:COMODO_Certification_Authority.pem 1052s Adding debian:COMODO_ECC_Certification_Authority.pem 1052s Adding debian:COMODO_RSA_Certification_Authority.pem 1052s Adding debian:Certainly_Root_E1.pem 1052s Adding debian:Certainly_Root_R1.pem 1052s Adding debian:Certigna.pem 1052s Adding debian:Certigna_Root_CA.pem 1052s Adding debian:Certum_EC-384_CA.pem 1052s Adding debian:Certum_Trusted_Network_CA.pem 1052s Adding debian:Certum_Trusted_Network_CA_2.pem 1052s Adding debian:Certum_Trusted_Root_CA.pem 1052s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 1052s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 1052s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 1052s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 1052s Adding debian:Comodo_AAA_Services_root.pem 1052s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 1052s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 1052s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 1052s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 1052s Adding debian:DigiCert_Assured_ID_Root_CA.pem 1052s Adding debian:DigiCert_Assured_ID_Root_G2.pem 1052s Adding debian:DigiCert_Assured_ID_Root_G3.pem 1052s Adding debian:DigiCert_Global_Root_CA.pem 1052s Adding debian:DigiCert_Global_Root_G2.pem 1052s Adding debian:DigiCert_Global_Root_G3.pem 1052s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 1052s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 1052s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 1052s Adding debian:DigiCert_Trusted_Root_G4.pem 1052s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 1052s Adding debian:Entrust_Root_Certification_Authority.pem 1052s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 1052s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 1052s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 1052s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 1052s Adding debian:GLOBALTRUST_2020.pem 1052s Adding debian:GTS_Root_R1.pem 1052s Adding debian:GTS_Root_R2.pem 1052s Adding debian:GTS_Root_R3.pem 1052s Adding debian:GTS_Root_R4.pem 1052s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 1052s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 1052s Adding debian:GlobalSign_Root_CA.pem 1052s Adding debian:GlobalSign_Root_CA_-_R3.pem 1052s Adding debian:GlobalSign_Root_CA_-_R6.pem 1052s Adding debian:GlobalSign_Root_E46.pem 1052s Adding debian:GlobalSign_Root_R46.pem 1052s Adding debian:Go_Daddy_Class_2_CA.pem 1052s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 1052s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 1052s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 1052s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 1052s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 1052s Adding debian:HiPKI_Root_CA_-_G1.pem 1052s Adding debian:Hongkong_Post_Root_CA_3.pem 1052s Adding debian:ISRG_Root_X1.pem 1052s Adding debian:ISRG_Root_X2.pem 1052s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 1052s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 1052s Adding debian:Izenpe.com.pem 1052s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 1052s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 1052s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 1052s Adding debian:NAVER_Global_Root_Certification_Authority.pem 1052s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 1052s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 1052s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 1052s Adding debian:QuoVadis_Root_CA_1_G3.pem 1052s Adding debian:QuoVadis_Root_CA_2.pem 1052s Adding debian:QuoVadis_Root_CA_2_G3.pem 1052s Adding debian:QuoVadis_Root_CA_3.pem 1052s Adding debian:QuoVadis_Root_CA_3_G3.pem 1052s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 1052s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 1052s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 1052s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 1052s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 1052s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 1052s Adding debian:SZAFIR_ROOT_CA2.pem 1052s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 1052s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 1052s Adding debian:SecureSign_RootCA11.pem 1052s Adding debian:SecureTrust_CA.pem 1052s Adding debian:Secure_Global_CA.pem 1052s Adding debian:Security_Communication_ECC_RootCA1.pem 1052s Adding debian:Security_Communication_RootCA2.pem 1052s Adding debian:Security_Communication_RootCA3.pem 1052s Adding debian:Security_Communication_Root_CA.pem 1052s Adding debian:Starfield_Class_2_CA.pem 1052s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 1052s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 1052s Adding debian:SwissSign_Gold_CA_-_G2.pem 1052s Adding debian:SwissSign_Silver_CA_-_G2.pem 1052s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 1052s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 1052s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 1052s Adding debian:TWCA_Global_Root_CA.pem 1052s Adding debian:TWCA_Root_Certification_Authority.pem 1052s Adding debian:TeliaSonera_Root_CA_v1.pem 1052s Adding debian:Telia_Root_CA_v2.pem 1052s Adding debian:TrustAsia_Global_Root_CA_G3.pem 1052s Adding debian:TrustAsia_Global_Root_CA_G4.pem 1052s Adding debian:Trustwave_Global_Certification_Authority.pem 1052s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 1052s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 1052s Adding debian:TunTrust_Root_CA.pem 1052s Adding debian:UCA_Extended_Validation_Root.pem 1052s Adding debian:UCA_Global_G2_Root.pem 1052s Adding debian:USERTrust_ECC_Certification_Authority.pem 1052s Adding debian:USERTrust_RSA_Certification_Authority.pem 1052s Adding debian:XRamp_Global_CA_Root.pem 1052s Adding debian:certSIGN_ROOT_CA.pem 1052s Adding debian:certSIGN_Root_CA_G2.pem 1052s Adding debian:e-Szigno_Root_CA_2017.pem 1052s Adding debian:ePKI_Root_Certification_Authority.pem 1052s Adding debian:emSign_ECC_Root_CA_-_C3.pem 1052s Adding debian:emSign_ECC_Root_CA_-_G3.pem 1052s Adding debian:emSign_Root_CA_-_C1.pem 1052s Adding debian:emSign_Root_CA_-_G1.pem 1052s Adding debian:vTrus_ECC_Root_CA.pem 1052s Adding debian:vTrus_Root_CA.pem 1052s done. 1052s Setting up openjdk-21-jre:arm64 (21.0.5+11-1) ... 1052s Setting up default-jre-headless (2:1.21-76) ... 1052s Setting up default-jre (2:1.21-76) ... 1052s Setting up picard-tools (3.1.1+dfsg-1) ... 1052s Setting up autopkgtest-satdep (0) ... 1060s (Reading database ... 94663 files and directories currently installed.) 1060s Removing autopkgtest-satdep (0) ... 1065s autopkgtest [19:21:26]: test picard-tools-run-unit-test: [----------------------- 1066s JavOpt: 1066s PicardProg: ViewSam 1066s PicardOpts: PF_STATUS=All ALIGNMENT_STATUS=All INPUT=unmapped.sam 1067s INFO 2024-11-01 19:21:28 ViewSam 1067s 1067s ********** NOTE: Picard's command line syntax is changing. 1067s ********** 1067s ********** For more information, please see: 1067s ********** 1067s https://github.com/broadinstitute/picard/wiki/Command-Line-Syntax-Transition-For-Users-(Pre-Transition) 1067s ********** 1067s ********** The command line looks like this in the new syntax: 1067s ********** 1067s ********** ViewSam -PF_STATUS All -ALIGNMENT_STATUS All -INPUT unmapped.sam 1067s ********** 1067s 1067s 1067s 19:21:28.361 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1067s 19:21:28.363 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 1067s 19:21:28.365 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1067s 19:21:28.367 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1067s 19:21:28.367 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 1067s 19:21:28.368 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1067s [Fri Nov 01 19:21:28 UTC 2024] ViewSam INPUT=unmapped.sam ALIGNMENT_STATUS=All PF_STATUS=All HEADER_ONLY=false RECORDS_ONLY=false VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false 1067s [Fri Nov 01 19:21:28 UTC 2024] Executing as ubuntu@autopkgtest on Linux 6.11.0-8-generic aarch64; OpenJDK 64-Bit Server VM 21.0.5+11-Ubuntu-1; Deflater: Jdk; Inflater: Jdk; Provider GCS is available; Picard version: 3.1.1 1067s @HD VN:1.0 SO:queryname 1067s @RG ID:0 SM:Hi,Mom! PL:ILLUMINA 1067s both_reads_align_clip_adapter 77 * 0 0 * * 0 0 CAACAGAAGCNGGNATCTGTGTTTGTGTTTCGGATTTCCTGCTGAANNGNTTNTCGNNTCNNNNNNNNATCCCGATTTCNTTCCGCAGCTNACCTCCCAAN )'.*.+2,))&&'&*/)-&*-)&.-)&)&),/-&&..)./.,.).*&&,&.&&-)&&&0*&&&&&&&&/32/,01460&&/6/*0*/2/283//36868/& RG:Z:0 aa:Z:Hello ab:Z:ATTCGG ac:B:c,1,2,3 af:B:f,1.0,2.0,3.0 ai:B:i,1,2,3 as:B:s,1,2,3 1067s both_reads_align_clip_adapter 141 * 0 0 * * 0 0 NCGCGGCATCNCGATTTCTTTCCGCAGCTAACCTCCCGACAGATCGGCAGCGCGTCGTGTAGGTTATTATGGTACATCTTGTCGTGCGGCNAGAGCATACA &/15445666651/566666553+2/14/&/555512+3/)-'/-&-'*+))*''13+3)'//++''/'))/3+&*5++)&'2+&+/*&-&&*)&-./1'1 RG:Z:0 aa:Z:Hello ab:Z:ATTCGG ac:B:c,1,2,3 af:B:f,1.0,2.0,3.0 ai:B:i,1,2,3 as:B:s,1,2,3 1067s both_reads_align_clip_marked 77 * 0 0 * * 0 0 CAACAGAAGCNGGNATCTGTGTTTGTGTTTCGGATTTCCTGCTGAANNGNTTNTCGNNTCNNNNNNNNATCCCGATTTCNTTCCGCAGCTNACCTCCCAAN )'.*.+2,))&&'&*/)-&*-)&.-)&)&),/-&&..)./.,.).*&&,&.&&-)&&&0*&&&&&&&&/32/,01460&&/6/*0*/2/283//36868/& RG:Z:0 XT:i:97 aa:Z:Hello ab:Z:ATTCGG ac:B:c,1,2,3 af:B:f,1.0,2.0,3.0 ai:B:i,1,2,3 as:B:s,1,2,3 1067s both_reads_align_clip_marked 141 * 0 0 * * 0 0 NCGCGGCATCNCGATTTCTTTCCGCAGCTAACCTCCCGACAGATCGGCAGCGCGTCGTGTAGGTTATTATGGTACATCTTGTCGTGCGGCNAGAGCATACA &/15445666651/566666553+2/14/&/555512+3/)-'/-&-'*+))*''13+3)'//++''/'))/3+&*5++)&'2+&+/*&-&&*)&-./1'1 RG:Z:0 XT:i:97 aa:Z:Hello ab:Z:ATTCGG ac:B:c,1,2,3 af:B:f,1.0,2.0,3.0 ai:B:i,1,2,3 as:B:s,1,2,3 1067s both_reads_present_only_first_aligns 77 * 0 0 * * 0 0 CAACAGAAGCNGGNATCTGTGTTTGTGTTTCGGATTTCCTGCTGAANNGNTTNTCGNNTCNNNNNNNNATCCCGATTTCNTTCCGCAGCTNACCTCCCAAN )'.*.+2,))&&'&*/)-&*-)&.-)&)&),/-&&..)./.,.).*&&,&.&&-)&&&0*&&&&&&&&/32/,01460&&/6/*0*/2/283//36868/& RG:Z:0 aa:Z:Hello ab:Z:ATTCGG ac:B:c,1,2,3 af:B:f,1.0,2.0,3.0 ai:B:i,1,2,3 as:B:s,1,2,3 1067s both_reads_present_only_first_aligns 141 * 0 0 * * 0 0 NCGCGGCATCNCGATTTCTTTCCGCAGCTAACCTCCCGACAGATCGGCAGCGCGTCGTGTAGGTTATTATGGTACATCTTGTCGTGCGGCNAGAGCATACA &/15445666651/566666553+2/14/&/555512+3/)-'/-&-'*+))*''13+3)'//++''/'))/3+&*5++)&'2+&+/*&-&&*)&-./1'1 RG:Z:0 aa:Z:Hello ab:Z:ATTCGG ac:B:c,1,2,3 af:B:f,1.0,2.0,3.0 ai:B:i,1,2,3 as:B:s,1,2,3 1067s neither_read_aligns_or_present 77 * 0 0 * * 0 0 CAACAGAAGCNGGNATCTGTGTTTGTGTTTCGGATTTCCTGCTGAANNGNTTNTCGNNTCNNNNNNNNATCCCGATTTCNTTCCGCAGCTNACCTCCCAAN )'.*.+2,))&&'&*/)-&*-)&.-)&)&),/-&&..)./.,.).*&&,&.&&-)&&&0*&&&&&&&&/32/,01460&&/6/*0*/2/283//36868/& RG:Z:0 aa:Z:Hello ab:Z:ATTCGG ac:B:c,1,2,3 af:B:f,1.0,2.0,3.0 ai:B:i,1,2,3 as:B:s,1,2,3 1067s neither_read_aligns_or_present 141 * 0 0 * * 0 0 NCGCGGCATCNCGATTTCTTTCCGCAGCTAACCTCCCGACAGATCGGCAGCGCGTCGTGTAGGTTATTATGGTACATCTTGTCGTGCGGCNAGAGCATACA &/15445666651/566666553+2/14/&/555512+3/)-'/-&-'*+))*''13+3)'//++''/'))/3+&*5++)&'2+&+/*&-&&*)&-./1'1 RG:Z:0 aa:Z:Hello ab:Z:ATTCGG ac:B:c,1,2,3 af:B:f,1.0,2.0,3.0 ai:B:i,1,2,3 as:B:s,1,2,3 1067s read_2_too_many_gaps 77 * 0 0 * * 0 0 CAACAGAAGCNGGNATCTGTGTTTGTGTTTCGGATTTCCTGCTGAANNGNTTNTCGNNTCNNNNNNNNATCCCGATTTCNTTCCGCAGCTNACCTCCCAAN )'.*.+2,))&&'&*/)-&*-)&.-)&)&),/-&&..)./.,.).*&&,&.&&-)&&&0*&&&&&&&&/32/,01460&&/6/*0*/2/283//36868/& RG:Z:0 aa:Z:Hello ab:Z:ATTCGG ac:B:c,1,2,3 af:B:f,1.0,2.0,3.0 ai:B:i,1,2,3 as:B:s,1,2,3 1067s read_2_too_many_gaps 141 * 0 0 * * 0 0 NCGCGGCATCNCGATTTCTTTCCGCAGCTAACCTCCCGACAGATCGGCAGCGCGTCGTGTAGGTTATTATGGTACATCTTGTCGTGCGGCNAGAGCATACA &/15445666651/566666553+2/14/&/555512+3/)-'/-&-'*+))*''13+3)'//++''/'))/3+&*5++)&'2+&+/*&-&&*)&-./1'1 RG:Z:0 aa:Z:Hello ab:Z:ATTCGG ac:B:c,1,2,3 af:B:f,1.0,2.0,3.0 ai:B:i,1,2,3 as:B:s,1,2,3 1067s [Fri Nov 01 19:21:28 UTC 2024] picard.sam.ViewSam done. Elapsed time: 0.00 minutes. 1067s Runtime.totalMemory()=67108864 1067s JavOpt: 1067s PicardProg: CollectSequencingArtifactMetrics 1067s PicardOpts: I=test.sam O=test R=test.fasta 1068s INFO 2024-11-01 19:21:29 CollectSequencingArtifactMetrics 1068s 1068s ********** NOTE: Picard's command line syntax is changing. 1068s ********** 1068s ********** For more information, please see: 1068s ********** 1068s https://github.com/broadinstitute/picard/wiki/Command-Line-Syntax-Transition-For-Users-(Pre-Transition) 1068s ********** 1068s ********** The command line looks like this in the new syntax: 1068s ********** 1068s ********** CollectSequencingArtifactMetrics -I test.sam -O test -R test.fasta 1068s ********** 1068s 1068s 1068s 19:21:29.546 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1068s 19:21:29.549 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 1068s 19:21:29.549 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1068s 19:21:29.551 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1068s 19:21:29.551 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 1068s 19:21:29.551 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1068s [Fri Nov 01 19:21:29 UTC 2024] CollectSequencingArtifactMetrics INPUT=test.sam OUTPUT=test REFERENCE_SEQUENCE=test.fasta MINIMUM_QUALITY_SCORE=20 MINIMUM_MAPPING_QUALITY=30 MINIMUM_INSERT_SIZE=60 MAXIMUM_INSERT_SIZE=600 INCLUDE_UNPAIRED=false INCLUDE_DUPLICATES=false INCLUDE_NON_PF_READS=false TANDEM_READS=false USE_OQ=true CONTEXT_SIZE=1 ASSUME_SORTED=true STOP_AFTER=0 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false 1068s [Fri Nov 01 19:21:29 UTC 2024] Executing as ubuntu@autopkgtest on Linux 6.11.0-8-generic aarch64; OpenJDK 64-Bit Server VM 21.0.5+11-Ubuntu-1; Deflater: Jdk; Inflater: Jdk; Provider GCS is available; Picard version: 3.1.1 1068s [Fri Nov 01 19:21:29 UTC 2024] picard.analysis.artifacts.CollectSequencingArtifactMetrics done. Elapsed time: 0.00 minutes. 1068s Runtime.totalMemory()=67108864 1068s All output files generated 1068s JavOpt: 1068s PicardProg: SortVcf 1068s PicardOpts: I=mini.vcf O=mini_sorted.vcf 1069s INFO 2024-11-01 19:21:30 SortVcf 1069s 1069s ********** NOTE: Picard's command line syntax is changing. 1069s ********** 1069s ********** For more information, please see: 1069s ********** 1069s https://github.com/broadinstitute/picard/wiki/Command-Line-Syntax-Transition-For-Users-(Pre-Transition) 1069s ********** 1069s ********** The command line looks like this in the new syntax: 1069s ********** 1069s ********** SortVcf -I mini.vcf -O mini_sorted.vcf 1069s ********** 1069s 1069s 1069s 19:21:30.840 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1069s 19:21:30.843 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 1069s 19:21:30.843 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1069s 19:21:30.845 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1069s 19:21:30.846 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 1069s 19:21:30.846 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1069s [Fri Nov 01 19:21:30 UTC 2024] SortVcf INPUT=[mini.vcf] OUTPUT=mini_sorted.vcf VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=true CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false 1069s [Fri Nov 01 19:21:30 UTC 2024] Executing as ubuntu@autopkgtest on Linux 6.11.0-8-generic aarch64; OpenJDK 64-Bit Server VM 21.0.5+11-Ubuntu-1; Deflater: Jdk; Inflater: Jdk; Provider GCS is available; Picard version: 3.1.1 1069s INFO 2024-11-01 19:21:30 SortVcf Reading entries from input file 1 1070s [Fri Nov 01 19:21:31 UTC 2024] picard.vcf.SortVcf done. Elapsed time: 0.01 minutes. 1070s Runtime.totalMemory()=67108864 1070s sorted vcf generated 1070s JavOpt: 1070s PicardProg: SplitVcfs 1070s PicardOpts: I=mini.vcf SNP_OUTPUT=snp.vcf INDEL_OUTPUT=indel.vcf 1071s INFO 2024-11-01 19:21:32 SplitVcfs 1071s 1071s ********** NOTE: Picard's command line syntax is changing. 1071s ********** 1071s ********** For more information, please see: 1071s ********** 1071s https://github.com/broadinstitute/picard/wiki/Command-Line-Syntax-Transition-For-Users-(Pre-Transition) 1071s ********** 1071s ********** The command line looks like this in the new syntax: 1071s ********** 1071s ********** SplitVcfs -I mini.vcf -SNP_OUTPUT snp.vcf -INDEL_OUTPUT indel.vcf 1071s ********** 1071s 1071s 1071s 19:21:32.349 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1071s 19:21:32.352 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 1071s 19:21:32.352 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1071s 19:21:32.354 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Loading libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1071s 19:21:32.354 WARN NativeLibraryLoader - LD_LIBRARY_PATH = null 1071s 19:21:32.354 WARN NativeLibraryLoader - OVERRIDE DEFAULT: Unable to load libgkl_compression.so from /usr/java/packages/lib:/usr/lib/aarch64-linux-gnu/jni:/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu:/usr/lib/jni:/lib:/usr/lib 1071s [Fri Nov 01 19:21:32 UTC 2024] SplitVcfs INPUT=mini.vcf SNP_OUTPUT=snp.vcf INDEL_OUTPUT=indel.vcf STRICT=true VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=true CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false 1071s [Fri Nov 01 19:21:32 UTC 2024] Executing as ubuntu@autopkgtest on Linux 6.11.0-8-generic aarch64; OpenJDK 64-Bit Server VM 21.0.5+11-Ubuntu-1; Deflater: Jdk; Inflater: Jdk; Provider GCS is available; Picard version: 3.1.1 1071s [Fri Nov 01 19:21:32 UTC 2024] picard.vcf.SplitVcfs done. Elapsed time: 0.01 minutes. 1071s Runtime.totalMemory()=67108864 1071s snp and indel vcfs generated 1072s autopkgtest [19:21:33]: test picard-tools-run-unit-test: -----------------------] 1072s autopkgtest [19:21:33]: test picard-tools-run-unit-test: - - - - - - - - - - results - - - - - - - - - - 1072s picard-tools-run-unit-test PASS 1073s autopkgtest [19:21:34]: test pilon-run-unit-test: preparing testbed 1145s autopkgtest [19:22:46]: testbed dpkg architecture: arm64 1145s autopkgtest [19:22:46]: testbed apt version: 2.9.8 1145s autopkgtest [19:22:46]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1146s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 1146s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2689 kB] 1146s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [41.7 kB] 1146s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 1146s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [183 kB] 1146s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [241 kB] 1146s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 1146s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [1982 kB] 1147s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [34.8 kB] 1147s Fetched 5303 kB in 1s (4628 kB/s) 1147s Reading package lists... 1150s Reading package lists... 1150s Building dependency tree... 1150s Reading state information... 1150s Calculating upgrade... 1151s The following packages will be upgraded: 1151s libevdev2 libftdi1-2 libinih1 nano python3-lazr.uri 1151s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1151s Need to get 374 kB of archives. 1151s After this operation, 17.4 kB of additional disk space will be used. 1151s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libevdev2 arm64 1.13.3+dfsg-1 [36.0 kB] 1151s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 nano arm64 8.2-1 [289 kB] 1151s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libftdi1-2 arm64 1.5-7 [28.4 kB] 1151s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libinih1 arm64 58-1ubuntu1 [7412 B] 1151s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lazr.uri all 1.0.6-4 [13.6 kB] 1152s Fetched 374 kB in 0s (898 kB/s) 1152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 1152s Preparing to unpack .../libevdev2_1.13.3+dfsg-1_arm64.deb ... 1152s Unpacking libevdev2:arm64 (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 1152s Preparing to unpack .../archives/nano_8.2-1_arm64.deb ... 1152s Unpacking nano (8.2-1) over (8.1-1) ... 1152s Preparing to unpack .../libftdi1-2_1.5-7_arm64.deb ... 1152s Unpacking libftdi1-2:arm64 (1.5-7) over (1.5-6build5) ... 1152s Preparing to unpack .../libinih1_58-1ubuntu1_arm64.deb ... 1152s Unpacking libinih1:arm64 (58-1ubuntu1) over (55-1ubuntu2) ... 1152s Preparing to unpack .../python3-lazr.uri_1.0.6-4_all.deb ... 1152s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 1152s Setting up libinih1:arm64 (58-1ubuntu1) ... 1152s Setting up python3-lazr.uri (1.0.6-4) ... 1152s Setting up libftdi1-2:arm64 (1.5-7) ... 1152s Setting up nano (8.2-1) ... 1152s Setting up libevdev2:arm64 (1.13.3+dfsg-1) ... 1152s Processing triggers for man-db (2.12.1-3) ... 1153s Processing triggers for install-info (7.1.1-1) ... 1153s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1153s Reading package lists... 1154s Building dependency tree... 1154s Reading state information... 1154s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1155s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 1155s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 1155s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 1155s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 1156s Reading package lists... 1156s Reading package lists... 1156s Building dependency tree... 1156s Reading state information... 1157s Calculating upgrade... 1157s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1157s Reading package lists... 1158s Building dependency tree... 1158s Reading state information... 1158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1163s Reading package lists... 1163s Building dependency tree... 1163s Reading state information... 1164s Starting pkgProblemResolver with broken count: 0 1164s Starting 2 pkgProblemResolver with broken count: 0 1164s Done 1164s The following additional packages will be installed: 1164s adwaita-icon-theme at-spi2-common ca-certificates-java 1164s dconf-gsettings-backend dconf-service default-jre default-jre-headless 1164s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 1164s gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme java-common 1164s java-wrappers libapache-pom-java libasound2-data libasound2t64 1164s libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 1164s libavahi-common-data libavahi-common3 libcairo-gobject2 libcairo2 libcolord2 1164s libcommons-compress-java libcommons-jexl2-java libcommons-lang-java 1164s libcommons-logging-java libcommons-parent-java libcups2t64 libdatrie1 1164s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 libepoxy0 libfontconfig1 1164s libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 1164s libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 1164s libgtk-3-0t64 libgtk-3-common libharfbuzz0b libhtsjdk-java libjbig0 1164s libjpeg-turbo8 libjpeg8 liblcms2-2 liblerc4 libmbedcrypto7t64 1164s libmbedtls14t64 libmbedx509-1t64 libmjson-java libncbi-ngs3 libncbi-vdb3 1164s libngs-java libngs-jni libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 1164s libpcsclite1 libpixman-1-0 librhino-java libsharpyuv0 libsnappy-java 1164s libsnappy-jni libsnappy1v5 libthai-data libthai0 libtiff6 libvulkan1 1164s libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 1164s libwebp7 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 1164s libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 1164s libxcomposite1 libxcursor1 libxdamage1 libxfixes3 libxi6 libxinerama1 1164s libxrandr2 libxrender1 libxshmfence1 libxtst6 libxxf86vm1 mesa-libgallium 1164s ncbi-vdb-data openjdk-21-jre openjdk-21-jre-headless pilon scala-library 1164s ubuntu-mono unzip x11-common 1164s Suggested packages: 1164s alsa-utils libasound2-plugins colord libasm-java libxz-java 1164s libcommons-lang-java-doc libavalon-framework-java libexcalibur-logkit-java 1164s liblog4j1.2-java cups-common gvfs picard-tools liblcms2-utils 1164s libngs-java-doc pcscd rhino libnss-mdns fonts-dejavu-extra 1164s fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei 1164s | fonts-wqy-zenhei fonts-indic zip 1164s Recommended packages: 1164s librsvg2-common alsa-ucm-conf alsa-topology-conf at-spi2-core 1164s libgdk-pixbuf2.0-bin libgl1-amber-dri libgtk-3-bin mesa-vulkan-drivers 1164s | vulkan-icd libatk-wrapper-java-jni fonts-dejavu-extra 1164s The following NEW packages will be installed: 1164s adwaita-icon-theme at-spi2-common autopkgtest-satdep ca-certificates-java 1164s dconf-gsettings-backend dconf-service default-jre default-jre-headless 1164s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 1164s gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme java-common 1164s java-wrappers libapache-pom-java libasound2-data libasound2t64 1164s libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 1164s libavahi-common-data libavahi-common3 libcairo-gobject2 libcairo2 libcolord2 1164s libcommons-compress-java libcommons-jexl2-java libcommons-lang-java 1164s libcommons-logging-java libcommons-parent-java libcups2t64 libdatrie1 1164s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-radeon1 libepoxy0 libfontconfig1 1164s libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 1164s libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 1164s libgtk-3-0t64 libgtk-3-common libharfbuzz0b libhtsjdk-java libjbig0 1164s libjpeg-turbo8 libjpeg8 liblcms2-2 liblerc4 libmbedcrypto7t64 1164s libmbedtls14t64 libmbedx509-1t64 libmjson-java libncbi-ngs3 libncbi-vdb3 1164s libngs-java libngs-jni libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 1164s libpcsclite1 libpixman-1-0 librhino-java libsharpyuv0 libsnappy-java 1164s libsnappy-jni libsnappy1v5 libthai-data libthai0 libtiff6 libvulkan1 1164s libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 1164s libwebp7 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 1164s libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 1164s libxcomposite1 libxcursor1 libxdamage1 libxfixes3 libxi6 libxinerama1 1164s libxrandr2 libxrender1 libxshmfence1 libxtst6 libxxf86vm1 mesa-libgallium 1164s ncbi-vdb-data openjdk-21-jre openjdk-21-jre-headless pilon scala-library 1164s ubuntu-mono unzip x11-common 1164s 0 upgraded, 119 newly installed, 0 to remove and 0 not upgraded. 1164s Need to get 85.0 MB/85.0 MB of archives. 1164s After this operation, 345 MB of additional disk space will be used. 1164s Get:1 /tmp/autopkgtest.d7OWAi/8-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [700 B] 1165s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 1165s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 1165s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 1165s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.21-1 [46.2 kB] 1165s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 1165s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 1165s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 1165s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 1165s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 1165s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1 [145 kB] 1165s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 gtk-update-icon-cache arm64 4.16.2+ds-2 [51.1 kB] 1165s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 hicolor-icon-theme all 0.18-1 [13.5 kB] 1166s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 humanity-icon-theme all 0.6.16 [1282 kB] 1166s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 ubuntu-mono all 24.04-0ubuntu1 [151 kB] 1166s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 adwaita-icon-theme all 47.0-1 [525 kB] 1166s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 at-spi2-common all 2.54.0-1 [8774 B] 1166s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 ca-certificates-java all 20240118 [11.6 kB] 1166s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libdconf1 arm64 0.40.0-4build2 [39.8 kB] 1166s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-service arm64 0.40.0-4build2 [26.9 kB] 1166s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 dconf-gsettings-backend arm64 0.40.0-4build2 [22.0 kB] 1166s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 java-common all 0.76 [6852 B] 1166s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.14-2build1 [161 kB] 1166s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libpcsclite1 arm64 2.3.0-1 [24.4 kB] 1166s Get:25 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre-headless arm64 21.0.5+11-1 [45.7 MB] 1167s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre-headless arm64 2:1.21-76 [3176 B] 1167s Get:27 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [55.0 kB] 1167s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 1167s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [80.2 kB] 1167s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [66.6 kB] 1167s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 1167s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 1167s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 1167s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 1167s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libpixman-1-0 arm64 0.42.2-1build1 [204 kB] 1167s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 1167s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 1167s Get:38 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 1167s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo2 arm64 1.18.2-2 [560 kB] 1167s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 libcairo-gobject2 arm64 1.18.2-2 [127 kB] 1167s Get:41 http://ftpmaster.internal/ubuntu plucky/main arm64 libcolord2 arm64 1.4.7-1build2 [149 kB] 1167s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common-data arm64 0.8-13ubuntu6 [29.6 kB] 1167s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-common3 arm64 0.8-13ubuntu6 [23.3 kB] 1167s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libavahi-client3 arm64 0.8-13ubuntu6 [27.2 kB] 1167s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libcups2t64 arm64 2.4.10-1ubuntu2 [271 kB] 1167s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 libepoxy0 arm64 1.5.10-1build1 [240 kB] 1167s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 1167s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 9.0.0-1 [486 kB] 1167s Get:49 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 1167s Get:50 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 1167s Get:51 http://ftpmaster.internal/ubuntu plucky/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 1167s Get:52 http://ftpmaster.internal/ubuntu plucky/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 1167s Get:53 http://ftpmaster.internal/ubuntu plucky/main arm64 libpango-1.0-0 arm64 1.54.0+ds-2 [233 kB] 1167s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-2 [48.8 kB] 1167s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-2 [27.5 kB] 1167s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-client0 arm64 1.23.0-1 [26.7 kB] 1167s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-cursor0 arm64 1.23.0-1 [10.6 kB] 1167s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-egl1 arm64 1.23.0-1 [5636 B] 1167s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcomposite1 arm64 1:0.4.5-1build3 [6336 B] 1167s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libxfixes3 arm64 1:6.0.0-2build1 [11.2 kB] 1167s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcursor1 arm64 1:1.2.2-1 [21.2 kB] 1167s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libxdamage1 arm64 1:1.1.6-1build1 [6236 B] 1167s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libxinerama1 arm64 2:1.1.4-3build1 [6394 B] 1167s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrandr2 arm64 2:1.5.4-1 [19.6 kB] 1167s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-common all 3.24.43-3ubuntu2 [1202 kB] 1167s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 libgtk-3-0t64 arm64 3.24.43-3ubuntu2 [2898 kB] 1167s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libglvnd0 arm64 1.7.0-1build1 [60.6 kB] 1167s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libglapi-mesa arm64 24.2.3-1ubuntu1 [59.4 kB] 1167s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libx11-xcb1 arm64 2:1.8.7-1build1 [7870 B] 1167s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [7418 B] 1167s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [7606 B] 1167s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-glx0 arm64 1.17.0-2 [25.5 kB] 1167s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-present0 arm64 1.17.0-2 [6224 B] 1167s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-randr0 arm64 1.17.0-2 [18.5 kB] 1167s Get:75 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-sync1 arm64 1.17.0-2 [9688 B] 1167s Get:76 http://ftpmaster.internal/ubuntu plucky/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [10.6 kB] 1167s Get:77 http://ftpmaster.internal/ubuntu plucky/main arm64 libxshmfence1 arm64 1.3-1build5 [4938 B] 1167s Get:78 http://ftpmaster.internal/ubuntu plucky/main arm64 libxxf86vm1 arm64 1:1.1.4-1build4 [9130 B] 1167s Get:79 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.122-1 [20.9 kB] 1167s Get:80 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-radeon1 arm64 2.4.122-1 [20.8 kB] 1167s Get:81 http://ftpmaster.internal/ubuntu plucky/main arm64 mesa-libgallium arm64 24.2.3-1ubuntu1 [9030 kB] 1167s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 libvulkan1 arm64 1.3.290.0-1 [153 kB] 1167s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 libwayland-server0 arm64 1.23.0-1 [35.7 kB] 1167s Get:84 http://ftpmaster.internal/ubuntu plucky/main arm64 libgbm1 arm64 24.2.3-1ubuntu1 [32.9 kB] 1167s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1-mesa-dri arm64 24.2.3-1ubuntu1 [33.3 kB] 1167s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx-mesa0 arm64 24.2.3-1ubuntu1 [164 kB] 1167s Get:87 http://ftpmaster.internal/ubuntu plucky/main arm64 libglx0 arm64 1.7.0-1build1 [33.2 kB] 1167s Get:88 http://ftpmaster.internal/ubuntu plucky/main arm64 libgl1 arm64 1.7.0-1build1 [106 kB] 1167s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2-data all 1.2.12-1 [21.0 kB] 1167s Get:90 http://ftpmaster.internal/ubuntu plucky/main arm64 libasound2t64 arm64 1.2.12-1 [384 kB] 1167s Get:91 http://ftpmaster.internal/ubuntu plucky/main arm64 libgif7 arm64 5.2.2-1ubuntu1 [35.5 kB] 1167s Get:92 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 1167s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 libxtst6 arm64 2:1.2.3-1.1build1 [13.0 kB] 1167s Get:94 http://ftpmaster.internal/ubuntu plucky/main arm64 openjdk-21-jre arm64 21.0.5+11-1 [221 kB] 1167s Get:95 http://ftpmaster.internal/ubuntu plucky/main arm64 default-jre arm64 2:1.21-76 [918 B] 1167s Get:96 http://ftpmaster.internal/ubuntu plucky/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 1167s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 java-wrappers all 0.5 [9042 B] 1167s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 libapache-pom-java all 33-2 [5874 B] 1167s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-parent-java all 56-1 [10.7 kB] 1168s Get:100 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-compress-java all 1.25.0-1 [612 kB] 1168s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 1168s Get:102 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-jexl2-java all 2.1.1-6 [250 kB] 1168s Get:103 http://ftpmaster.internal/ubuntu plucky/universe arm64 libcommons-lang-java all 2.6-10 [270 kB] 1168s Get:104 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmjson-java all 1.4.0-3 [60.4 kB] 1168s Get:105 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedcrypto7t64 arm64 2.28.8-1 [209 kB] 1168s Get:106 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedx509-1t64 arm64 2.28.8-1 [47.2 kB] 1168s Get:107 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmbedtls14t64 arm64 2.28.8-1 [82.2 kB] 1168s Get:108 http://ftpmaster.internal/ubuntu plucky/universe arm64 ncbi-vdb-data all 3.0.2+dfsg-2build2 [67.5 kB] 1168s Get:109 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-vdb3 arm64 3.0.2+dfsg-2build2 [1143 kB] 1168s Get:110 http://ftpmaster.internal/ubuntu plucky/universe arm64 libncbi-ngs3 arm64 3.0.3+dfsg-9ubuntu1 [145 kB] 1168s Get:111 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-jni arm64 3.0.3+dfsg-9ubuntu1 [4844 B] 1168s Get:112 http://ftpmaster.internal/ubuntu plucky/universe arm64 libngs-java arm64 3.0.3+dfsg-9ubuntu1 [91.1 kB] 1168s Get:113 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 librhino-java all 1.7.15-1 [1354 kB] 1168s Get:114 http://ftpmaster.internal/ubuntu plucky/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB] 1168s Get:115 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-jni arm64 1.1.10.5-2 [6618 B] 1168s Get:116 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsnappy-java all 1.1.10.5-2 [83.7 kB] 1168s Get:117 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtsjdk-java all 4.1.0+dfsg-2 [1823 kB] 1168s Get:118 http://ftpmaster.internal/ubuntu plucky/universe arm64 scala-library all 2.11.12-5 [9586 kB] 1169s Get:119 http://ftpmaster.internal/ubuntu plucky/universe arm64 pilon all 1.24-3 [495 kB] 1169s Fetched 85.0 MB in 4s (19.5 MB/s) 1169s Selecting previously unselected package libgdk-pixbuf2.0-common. 1169s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79705 files and directories currently installed.) 1169s Preparing to unpack .../000-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 1169s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 1169s Selecting previously unselected package libjpeg-turbo8:arm64. 1169s Preparing to unpack .../001-libjpeg-turbo8_2.1.5-2ubuntu2_arm64.deb ... 1169s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 1169s Selecting previously unselected package libjpeg8:arm64. 1169s Preparing to unpack .../002-libjpeg8_8c-2ubuntu11_arm64.deb ... 1169s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 1169s Selecting previously unselected package libdeflate0:arm64. 1169s Preparing to unpack .../003-libdeflate0_1.21-1_arm64.deb ... 1169s Unpacking libdeflate0:arm64 (1.21-1) ... 1169s Selecting previously unselected package libjbig0:arm64. 1169s Preparing to unpack .../004-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 1169s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 1169s Selecting previously unselected package liblerc4:arm64. 1169s Preparing to unpack .../005-liblerc4_4.0.0+ds-4ubuntu2_arm64.deb ... 1169s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 1169s Selecting previously unselected package libsharpyuv0:arm64. 1169s Preparing to unpack .../006-libsharpyuv0_1.4.0-0.1_arm64.deb ... 1169s Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ... 1169s Selecting previously unselected package libwebp7:arm64. 1169s Preparing to unpack .../007-libwebp7_1.4.0-0.1_arm64.deb ... 1169s Unpacking libwebp7:arm64 (1.4.0-0.1) ... 1169s Selecting previously unselected package libtiff6:arm64. 1169s Preparing to unpack .../008-libtiff6_4.5.1+git230720-4ubuntu4_arm64.deb ... 1169s Unpacking libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 1170s Selecting previously unselected package libgdk-pixbuf-2.0-0:arm64. 1170s Preparing to unpack .../009-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_arm64.deb ... 1170s Unpacking libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 1170s Selecting previously unselected package gtk-update-icon-cache. 1170s Preparing to unpack .../010-gtk-update-icon-cache_4.16.2+ds-2_arm64.deb ... 1170s No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. 1170s No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. 1170s Unpacking gtk-update-icon-cache (4.16.2+ds-2) ... 1170s Selecting previously unselected package hicolor-icon-theme. 1170s Preparing to unpack .../011-hicolor-icon-theme_0.18-1_all.deb ... 1170s Unpacking hicolor-icon-theme (0.18-1) ... 1170s Selecting previously unselected package humanity-icon-theme. 1170s Preparing to unpack .../012-humanity-icon-theme_0.6.16_all.deb ... 1170s Unpacking humanity-icon-theme (0.6.16) ... 1170s Selecting previously unselected package ubuntu-mono. 1170s Preparing to unpack .../013-ubuntu-mono_24.04-0ubuntu1_all.deb ... 1170s Unpacking ubuntu-mono (24.04-0ubuntu1) ... 1170s Selecting previously unselected package adwaita-icon-theme. 1170s Preparing to unpack .../014-adwaita-icon-theme_47.0-1_all.deb ... 1170s Unpacking adwaita-icon-theme (47.0-1) ... 1171s Selecting previously unselected package at-spi2-common. 1171s Preparing to unpack .../015-at-spi2-common_2.54.0-1_all.deb ... 1171s Unpacking at-spi2-common (2.54.0-1) ... 1171s Selecting previously unselected package ca-certificates-java. 1171s Preparing to unpack .../016-ca-certificates-java_20240118_all.deb ... 1171s Unpacking ca-certificates-java (20240118) ... 1171s Selecting previously unselected package libdconf1:arm64. 1171s Preparing to unpack .../017-libdconf1_0.40.0-4build2_arm64.deb ... 1171s Unpacking libdconf1:arm64 (0.40.0-4build2) ... 1171s Selecting previously unselected package dconf-service. 1171s Preparing to unpack .../018-dconf-service_0.40.0-4build2_arm64.deb ... 1171s Unpacking dconf-service (0.40.0-4build2) ... 1171s Selecting previously unselected package dconf-gsettings-backend:arm64. 1171s Preparing to unpack .../019-dconf-gsettings-backend_0.40.0-4build2_arm64.deb ... 1171s Unpacking dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 1171s Selecting previously unselected package java-common. 1171s Preparing to unpack .../020-java-common_0.76_all.deb ... 1171s Unpacking java-common (0.76) ... 1171s Selecting previously unselected package liblcms2-2:arm64. 1171s Preparing to unpack .../021-liblcms2-2_2.14-2build1_arm64.deb ... 1171s Unpacking liblcms2-2:arm64 (2.14-2build1) ... 1171s Selecting previously unselected package libpcsclite1:arm64. 1171s Preparing to unpack .../022-libpcsclite1_2.3.0-1_arm64.deb ... 1171s Unpacking libpcsclite1:arm64 (2.3.0-1) ... 1171s Selecting previously unselected package openjdk-21-jre-headless:arm64. 1171s Preparing to unpack .../023-openjdk-21-jre-headless_21.0.5+11-1_arm64.deb ... 1171s Unpacking openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 1172s Selecting previously unselected package default-jre-headless. 1172s Preparing to unpack .../024-default-jre-headless_2%3a1.21-76_arm64.deb ... 1172s Unpacking default-jre-headless (2:1.21-76) ... 1172s Selecting previously unselected package libatk1.0-0t64:arm64. 1172s Preparing to unpack .../025-libatk1.0-0t64_2.54.0-1_arm64.deb ... 1172s Unpacking libatk1.0-0t64:arm64 (2.54.0-1) ... 1172s Selecting previously unselected package libxi6:arm64. 1172s Preparing to unpack .../026-libxi6_2%3a1.8.2-1_arm64.deb ... 1172s Unpacking libxi6:arm64 (2:1.8.2-1) ... 1172s Selecting previously unselected package libatspi2.0-0t64:arm64. 1172s Preparing to unpack .../027-libatspi2.0-0t64_2.54.0-1_arm64.deb ... 1172s Unpacking libatspi2.0-0t64:arm64 (2.54.0-1) ... 1172s Selecting previously unselected package libatk-bridge2.0-0t64:arm64. 1172s Preparing to unpack .../028-libatk-bridge2.0-0t64_2.54.0-1_arm64.deb ... 1172s Unpacking libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 1172s Selecting previously unselected package fonts-dejavu-mono. 1172s Preparing to unpack .../029-fonts-dejavu-mono_2.37-8_all.deb ... 1172s Unpacking fonts-dejavu-mono (2.37-8) ... 1172s Selecting previously unselected package fonts-dejavu-core. 1172s Preparing to unpack .../030-fonts-dejavu-core_2.37-8_all.deb ... 1172s Unpacking fonts-dejavu-core (2.37-8) ... 1172s Selecting previously unselected package fontconfig-config. 1172s Preparing to unpack .../031-fontconfig-config_2.15.0-1.1ubuntu2_arm64.deb ... 1173s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 1173s Selecting previously unselected package libfontconfig1:arm64. 1173s Preparing to unpack .../032-libfontconfig1_2.15.0-1.1ubuntu2_arm64.deb ... 1173s Unpacking libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 1173s Selecting previously unselected package libpixman-1-0:arm64. 1173s Preparing to unpack .../033-libpixman-1-0_0.42.2-1build1_arm64.deb ... 1173s Unpacking libpixman-1-0:arm64 (0.42.2-1build1) ... 1173s Selecting previously unselected package libxcb-render0:arm64. 1173s Preparing to unpack .../034-libxcb-render0_1.17.0-2_arm64.deb ... 1173s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 1173s Selecting previously unselected package libxcb-shm0:arm64. 1173s Preparing to unpack .../035-libxcb-shm0_1.17.0-2_arm64.deb ... 1173s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 1173s Selecting previously unselected package libxrender1:arm64. 1173s Preparing to unpack .../036-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 1173s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 1173s Selecting previously unselected package libcairo2:arm64. 1173s Preparing to unpack .../037-libcairo2_1.18.2-2_arm64.deb ... 1173s Unpacking libcairo2:arm64 (1.18.2-2) ... 1173s Selecting previously unselected package libcairo-gobject2:arm64. 1173s Preparing to unpack .../038-libcairo-gobject2_1.18.2-2_arm64.deb ... 1173s Unpacking libcairo-gobject2:arm64 (1.18.2-2) ... 1173s Selecting previously unselected package libcolord2:arm64. 1173s Preparing to unpack .../039-libcolord2_1.4.7-1build2_arm64.deb ... 1173s Unpacking libcolord2:arm64 (1.4.7-1build2) ... 1173s Selecting previously unselected package libavahi-common-data:arm64. 1173s Preparing to unpack .../040-libavahi-common-data_0.8-13ubuntu6_arm64.deb ... 1173s Unpacking libavahi-common-data:arm64 (0.8-13ubuntu6) ... 1173s Selecting previously unselected package libavahi-common3:arm64. 1173s Preparing to unpack .../041-libavahi-common3_0.8-13ubuntu6_arm64.deb ... 1173s Unpacking libavahi-common3:arm64 (0.8-13ubuntu6) ... 1173s Selecting previously unselected package libavahi-client3:arm64. 1173s Preparing to unpack .../042-libavahi-client3_0.8-13ubuntu6_arm64.deb ... 1173s Unpacking libavahi-client3:arm64 (0.8-13ubuntu6) ... 1173s Selecting previously unselected package libcups2t64:arm64. 1173s Preparing to unpack .../043-libcups2t64_2.4.10-1ubuntu2_arm64.deb ... 1173s Unpacking libcups2t64:arm64 (2.4.10-1ubuntu2) ... 1173s Selecting previously unselected package libepoxy0:arm64. 1173s Preparing to unpack .../044-libepoxy0_1.5.10-1build1_arm64.deb ... 1173s Unpacking libepoxy0:arm64 (1.5.10-1build1) ... 1173s Selecting previously unselected package libgraphite2-3:arm64. 1173s Preparing to unpack .../045-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 1173s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 1173s Selecting previously unselected package libharfbuzz0b:arm64. 1173s Preparing to unpack .../046-libharfbuzz0b_9.0.0-1_arm64.deb ... 1173s Unpacking libharfbuzz0b:arm64 (9.0.0-1) ... 1173s Selecting previously unselected package fontconfig. 1173s Preparing to unpack .../047-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 1173s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 1173s Selecting previously unselected package libthai-data. 1173s Preparing to unpack .../048-libthai-data_0.1.29-2build1_all.deb ... 1173s Unpacking libthai-data (0.1.29-2build1) ... 1173s Selecting previously unselected package libdatrie1:arm64. 1173s Preparing to unpack .../049-libdatrie1_0.2.13-3build1_arm64.deb ... 1173s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 1173s Selecting previously unselected package libthai0:arm64. 1173s Preparing to unpack .../050-libthai0_0.1.29-2build1_arm64.deb ... 1173s Unpacking libthai0:arm64 (0.1.29-2build1) ... 1173s Selecting previously unselected package libpango-1.0-0:arm64. 1173s Preparing to unpack .../051-libpango-1.0-0_1.54.0+ds-2_arm64.deb ... 1173s Unpacking libpango-1.0-0:arm64 (1.54.0+ds-2) ... 1173s Selecting previously unselected package libpangoft2-1.0-0:arm64. 1173s Preparing to unpack .../052-libpangoft2-1.0-0_1.54.0+ds-2_arm64.deb ... 1173s Unpacking libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 1173s Selecting previously unselected package libpangocairo-1.0-0:arm64. 1173s Preparing to unpack .../053-libpangocairo-1.0-0_1.54.0+ds-2_arm64.deb ... 1173s Unpacking libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 1173s Selecting previously unselected package libwayland-client0:arm64. 1173s Preparing to unpack .../054-libwayland-client0_1.23.0-1_arm64.deb ... 1173s Unpacking libwayland-client0:arm64 (1.23.0-1) ... 1173s Selecting previously unselected package libwayland-cursor0:arm64. 1173s Preparing to unpack .../055-libwayland-cursor0_1.23.0-1_arm64.deb ... 1173s Unpacking libwayland-cursor0:arm64 (1.23.0-1) ... 1173s Selecting previously unselected package libwayland-egl1:arm64. 1173s Preparing to unpack .../056-libwayland-egl1_1.23.0-1_arm64.deb ... 1173s Unpacking libwayland-egl1:arm64 (1.23.0-1) ... 1174s Selecting previously unselected package libxcomposite1:arm64. 1174s Preparing to unpack .../057-libxcomposite1_1%3a0.4.5-1build3_arm64.deb ... 1174s Unpacking libxcomposite1:arm64 (1:0.4.5-1build3) ... 1174s Selecting previously unselected package libxfixes3:arm64. 1174s Preparing to unpack .../058-libxfixes3_1%3a6.0.0-2build1_arm64.deb ... 1174s Unpacking libxfixes3:arm64 (1:6.0.0-2build1) ... 1174s Selecting previously unselected package libxcursor1:arm64. 1174s Preparing to unpack .../059-libxcursor1_1%3a1.2.2-1_arm64.deb ... 1174s Unpacking libxcursor1:arm64 (1:1.2.2-1) ... 1174s Selecting previously unselected package libxdamage1:arm64. 1174s Preparing to unpack .../060-libxdamage1_1%3a1.1.6-1build1_arm64.deb ... 1174s Unpacking libxdamage1:arm64 (1:1.1.6-1build1) ... 1174s Selecting previously unselected package libxinerama1:arm64. 1174s Preparing to unpack .../061-libxinerama1_2%3a1.1.4-3build1_arm64.deb ... 1174s Unpacking libxinerama1:arm64 (2:1.1.4-3build1) ... 1174s Selecting previously unselected package libxrandr2:arm64. 1174s Preparing to unpack .../062-libxrandr2_2%3a1.5.4-1_arm64.deb ... 1174s Unpacking libxrandr2:arm64 (2:1.5.4-1) ... 1174s Selecting previously unselected package libgtk-3-common. 1174s Preparing to unpack .../063-libgtk-3-common_3.24.43-3ubuntu2_all.deb ... 1174s Unpacking libgtk-3-common (3.24.43-3ubuntu2) ... 1174s Selecting previously unselected package libgtk-3-0t64:arm64. 1174s Preparing to unpack .../064-libgtk-3-0t64_3.24.43-3ubuntu2_arm64.deb ... 1174s Unpacking libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 1174s Selecting previously unselected package libglvnd0:arm64. 1174s Preparing to unpack .../065-libglvnd0_1.7.0-1build1_arm64.deb ... 1174s Unpacking libglvnd0:arm64 (1.7.0-1build1) ... 1174s Selecting previously unselected package libglapi-mesa:arm64. 1174s Preparing to unpack .../066-libglapi-mesa_24.2.3-1ubuntu1_arm64.deb ... 1174s Unpacking libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 1174s Selecting previously unselected package libx11-xcb1:arm64. 1174s Preparing to unpack .../067-libx11-xcb1_2%3a1.8.7-1build1_arm64.deb ... 1174s Unpacking libx11-xcb1:arm64 (2:1.8.7-1build1) ... 1174s Selecting previously unselected package libxcb-dri2-0:arm64. 1174s Preparing to unpack .../068-libxcb-dri2-0_1.17.0-2_arm64.deb ... 1174s Unpacking libxcb-dri2-0:arm64 (1.17.0-2) ... 1174s Selecting previously unselected package libxcb-dri3-0:arm64. 1174s Preparing to unpack .../069-libxcb-dri3-0_1.17.0-2_arm64.deb ... 1174s Unpacking libxcb-dri3-0:arm64 (1.17.0-2) ... 1174s Selecting previously unselected package libxcb-glx0:arm64. 1174s Preparing to unpack .../070-libxcb-glx0_1.17.0-2_arm64.deb ... 1174s Unpacking libxcb-glx0:arm64 (1.17.0-2) ... 1174s Selecting previously unselected package libxcb-present0:arm64. 1174s Preparing to unpack .../071-libxcb-present0_1.17.0-2_arm64.deb ... 1174s Unpacking libxcb-present0:arm64 (1.17.0-2) ... 1174s Selecting previously unselected package libxcb-randr0:arm64. 1174s Preparing to unpack .../072-libxcb-randr0_1.17.0-2_arm64.deb ... 1174s Unpacking libxcb-randr0:arm64 (1.17.0-2) ... 1174s Selecting previously unselected package libxcb-sync1:arm64. 1174s Preparing to unpack .../073-libxcb-sync1_1.17.0-2_arm64.deb ... 1174s Unpacking libxcb-sync1:arm64 (1.17.0-2) ... 1174s Selecting previously unselected package libxcb-xfixes0:arm64. 1174s Preparing to unpack .../074-libxcb-xfixes0_1.17.0-2_arm64.deb ... 1174s Unpacking libxcb-xfixes0:arm64 (1.17.0-2) ... 1174s Selecting previously unselected package libxshmfence1:arm64. 1174s Preparing to unpack .../075-libxshmfence1_1.3-1build5_arm64.deb ... 1174s Unpacking libxshmfence1:arm64 (1.3-1build5) ... 1174s Selecting previously unselected package libxxf86vm1:arm64. 1174s Preparing to unpack .../076-libxxf86vm1_1%3a1.1.4-1build4_arm64.deb ... 1174s Unpacking libxxf86vm1:arm64 (1:1.1.4-1build4) ... 1174s Selecting previously unselected package libdrm-amdgpu1:arm64. 1174s Preparing to unpack .../077-libdrm-amdgpu1_2.4.122-1_arm64.deb ... 1174s Unpacking libdrm-amdgpu1:arm64 (2.4.122-1) ... 1174s Selecting previously unselected package libdrm-radeon1:arm64. 1174s Preparing to unpack .../078-libdrm-radeon1_2.4.122-1_arm64.deb ... 1174s Unpacking libdrm-radeon1:arm64 (2.4.122-1) ... 1174s Selecting previously unselected package mesa-libgallium:arm64. 1174s Preparing to unpack .../079-mesa-libgallium_24.2.3-1ubuntu1_arm64.deb ... 1174s Unpacking mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 1175s Selecting previously unselected package libvulkan1:arm64. 1175s Preparing to unpack .../080-libvulkan1_1.3.290.0-1_arm64.deb ... 1175s Unpacking libvulkan1:arm64 (1.3.290.0-1) ... 1175s Selecting previously unselected package libwayland-server0:arm64. 1175s Preparing to unpack .../081-libwayland-server0_1.23.0-1_arm64.deb ... 1175s Unpacking libwayland-server0:arm64 (1.23.0-1) ... 1175s Selecting previously unselected package libgbm1:arm64. 1175s Preparing to unpack .../082-libgbm1_24.2.3-1ubuntu1_arm64.deb ... 1175s Unpacking libgbm1:arm64 (24.2.3-1ubuntu1) ... 1175s Selecting previously unselected package libgl1-mesa-dri:arm64. 1175s Preparing to unpack .../083-libgl1-mesa-dri_24.2.3-1ubuntu1_arm64.deb ... 1175s Unpacking libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 1175s Selecting previously unselected package libglx-mesa0:arm64. 1175s Preparing to unpack .../084-libglx-mesa0_24.2.3-1ubuntu1_arm64.deb ... 1175s Unpacking libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 1175s Selecting previously unselected package libglx0:arm64. 1175s Preparing to unpack .../085-libglx0_1.7.0-1build1_arm64.deb ... 1175s Unpacking libglx0:arm64 (1.7.0-1build1) ... 1175s Selecting previously unselected package libgl1:arm64. 1175s Preparing to unpack .../086-libgl1_1.7.0-1build1_arm64.deb ... 1175s Unpacking libgl1:arm64 (1.7.0-1build1) ... 1175s Selecting previously unselected package libasound2-data. 1175s Preparing to unpack .../087-libasound2-data_1.2.12-1_all.deb ... 1175s Unpacking libasound2-data (1.2.12-1) ... 1175s Selecting previously unselected package libasound2t64:arm64. 1175s Preparing to unpack .../088-libasound2t64_1.2.12-1_arm64.deb ... 1175s Unpacking libasound2t64:arm64 (1.2.12-1) ... 1175s Selecting previously unselected package libgif7:arm64. 1175s Preparing to unpack .../089-libgif7_5.2.2-1ubuntu1_arm64.deb ... 1175s Unpacking libgif7:arm64 (5.2.2-1ubuntu1) ... 1175s Selecting previously unselected package x11-common. 1175s Preparing to unpack .../090-x11-common_1%3a7.7+23ubuntu3_all.deb ... 1175s Unpacking x11-common (1:7.7+23ubuntu3) ... 1175s Selecting previously unselected package libxtst6:arm64. 1175s Preparing to unpack .../091-libxtst6_2%3a1.2.3-1.1build1_arm64.deb ... 1175s Unpacking libxtst6:arm64 (2:1.2.3-1.1build1) ... 1175s Selecting previously unselected package openjdk-21-jre:arm64. 1175s Preparing to unpack .../092-openjdk-21-jre_21.0.5+11-1_arm64.deb ... 1175s Unpacking openjdk-21-jre:arm64 (21.0.5+11-1) ... 1175s Selecting previously unselected package default-jre. 1175s Preparing to unpack .../093-default-jre_2%3a1.21-76_arm64.deb ... 1175s Unpacking default-jre (2:1.21-76) ... 1175s Selecting previously unselected package unzip. 1175s Preparing to unpack .../094-unzip_6.0-28ubuntu6_arm64.deb ... 1175s Unpacking unzip (6.0-28ubuntu6) ... 1175s Selecting previously unselected package java-wrappers. 1175s Preparing to unpack .../095-java-wrappers_0.5_all.deb ... 1175s Unpacking java-wrappers (0.5) ... 1175s Selecting previously unselected package libapache-pom-java. 1175s Preparing to unpack .../096-libapache-pom-java_33-2_all.deb ... 1175s Unpacking libapache-pom-java (33-2) ... 1175s Selecting previously unselected package libcommons-parent-java. 1175s Preparing to unpack .../097-libcommons-parent-java_56-1_all.deb ... 1175s Unpacking libcommons-parent-java (56-1) ... 1175s Selecting previously unselected package libcommons-compress-java. 1175s Preparing to unpack .../098-libcommons-compress-java_1.25.0-1_all.deb ... 1175s Unpacking libcommons-compress-java (1.25.0-1) ... 1175s Selecting previously unselected package libcommons-logging-java. 1175s Preparing to unpack .../099-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ... 1175s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ... 1175s Selecting previously unselected package libcommons-jexl2-java. 1175s Preparing to unpack .../100-libcommons-jexl2-java_2.1.1-6_all.deb ... 1175s Unpacking libcommons-jexl2-java (2.1.1-6) ... 1175s Selecting previously unselected package libcommons-lang-java. 1175s Preparing to unpack .../101-libcommons-lang-java_2.6-10_all.deb ... 1175s Unpacking libcommons-lang-java (2.6-10) ... 1176s Selecting previously unselected package libmjson-java. 1176s Preparing to unpack .../102-libmjson-java_1.4.0-3_all.deb ... 1176s Unpacking libmjson-java (1.4.0-3) ... 1176s Selecting previously unselected package libmbedcrypto7t64:arm64. 1176s Preparing to unpack .../103-libmbedcrypto7t64_2.28.8-1_arm64.deb ... 1176s Unpacking libmbedcrypto7t64:arm64 (2.28.8-1) ... 1176s Selecting previously unselected package libmbedx509-1t64:arm64. 1176s Preparing to unpack .../104-libmbedx509-1t64_2.28.8-1_arm64.deb ... 1176s Unpacking libmbedx509-1t64:arm64 (2.28.8-1) ... 1176s Selecting previously unselected package libmbedtls14t64:arm64. 1176s Preparing to unpack .../105-libmbedtls14t64_2.28.8-1_arm64.deb ... 1176s Unpacking libmbedtls14t64:arm64 (2.28.8-1) ... 1176s Selecting previously unselected package ncbi-vdb-data. 1176s Preparing to unpack .../106-ncbi-vdb-data_3.0.2+dfsg-2build2_all.deb ... 1176s Unpacking ncbi-vdb-data (3.0.2+dfsg-2build2) ... 1176s Selecting previously unselected package libncbi-vdb3:arm64. 1176s Preparing to unpack .../107-libncbi-vdb3_3.0.2+dfsg-2build2_arm64.deb ... 1176s Unpacking libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 1176s Selecting previously unselected package libncbi-ngs3:arm64. 1176s Preparing to unpack .../108-libncbi-ngs3_3.0.3+dfsg-9ubuntu1_arm64.deb ... 1176s Unpacking libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 1176s Selecting previously unselected package libngs-jni:arm64. 1176s Preparing to unpack .../109-libngs-jni_3.0.3+dfsg-9ubuntu1_arm64.deb ... 1176s Unpacking libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 1176s Selecting previously unselected package libngs-java:arm64. 1176s Preparing to unpack .../110-libngs-java_3.0.3+dfsg-9ubuntu1_arm64.deb ... 1176s Unpacking libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 1176s Selecting previously unselected package librhino-java. 1176s Preparing to unpack .../111-librhino-java_1.7.15-1_all.deb ... 1176s Unpacking librhino-java (1.7.15-1) ... 1176s Selecting previously unselected package libsnappy1v5:arm64. 1176s Preparing to unpack .../112-libsnappy1v5_1.2.1-1_arm64.deb ... 1176s Unpacking libsnappy1v5:arm64 (1.2.1-1) ... 1176s Selecting previously unselected package libsnappy-jni. 1176s Preparing to unpack .../113-libsnappy-jni_1.1.10.5-2_arm64.deb ... 1176s Unpacking libsnappy-jni (1.1.10.5-2) ... 1176s Selecting previously unselected package libsnappy-java. 1176s Preparing to unpack .../114-libsnappy-java_1.1.10.5-2_all.deb ... 1176s Unpacking libsnappy-java (1.1.10.5-2) ... 1176s Selecting previously unselected package libhtsjdk-java. 1176s Preparing to unpack .../115-libhtsjdk-java_4.1.0+dfsg-2_all.deb ... 1176s Unpacking libhtsjdk-java (4.1.0+dfsg-2) ... 1176s Selecting previously unselected package scala-library. 1176s Preparing to unpack .../116-scala-library_2.11.12-5_all.deb ... 1176s Unpacking scala-library (2.11.12-5) ... 1177s Selecting previously unselected package pilon. 1177s Preparing to unpack .../117-pilon_1.24-3_all.deb ... 1177s Unpacking pilon (1.24-3) ... 1177s Selecting previously unselected package autopkgtest-satdep. 1177s Preparing to unpack .../118-8-autopkgtest-satdep.deb ... 1177s Unpacking autopkgtest-satdep (0) ... 1177s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 1177s Setting up libxcb-dri3-0:arm64 (1.17.0-2) ... 1177s Setting up liblcms2-2:arm64 (2.14-2build1) ... 1177s Setting up libpixman-1-0:arm64 (0.42.2-1build1) ... 1177s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 1177s Setting up libwayland-server0:arm64 (1.23.0-1) ... 1177s Setting up libx11-xcb1:arm64 (2:1.8.7-1build1) ... 1177s Setting up libxdamage1:arm64 (1:1.1.6-1build1) ... 1177s Setting up libxcb-xfixes0:arm64 (1.17.0-2) ... 1177s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 1177s Setting up hicolor-icon-theme (0.18-1) ... 1177s Setting up libxi6:arm64 (2:1.8.2-1) ... 1177s Setting up libmbedcrypto7t64:arm64 (2.28.8-1) ... 1177s Setting up java-common (0.76) ... 1177s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 1177s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 1177s Setting up libxcb-render0:arm64 (1.17.0-2) ... 1177s Setting up libdrm-radeon1:arm64 (2.4.122-1) ... 1177s Setting up libglvnd0:arm64 (1.7.0-1build1) ... 1177s Setting up libmjson-java (1.4.0-3) ... 1177s Setting up libxcb-glx0:arm64 (1.17.0-2) ... 1177s Setting up unzip (6.0-28ubuntu6) ... 1177s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 1177s Setting up x11-common (1:7.7+23ubuntu3) ... 1177s Setting up libdeflate0:arm64 (1.21-1) ... 1177s Setting up scala-library (2.11.12-5) ... 1177s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 1177s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 1177s Setting up libcolord2:arm64 (1.4.7-1build2) ... 1177s Setting up libxxf86vm1:arm64 (1:1.1.4-1build4) ... 1177s Setting up libsnappy1v5:arm64 (1.2.1-1) ... 1177s Setting up libxcb-present0:arm64 (1.17.0-2) ... 1177s Setting up libdconf1:arm64 (0.40.0-4build2) ... 1177s Setting up libasound2-data (1.2.12-1) ... 1177s Setting up librhino-java (1.7.15-1) ... 1177s Setting up libasound2t64:arm64 (1.2.12-1) ... 1177s Setting up libepoxy0:arm64 (1.5.10-1build1) ... 1177s Setting up libxfixes3:arm64 (1:6.0.0-2build1) ... 1177s Setting up libxcb-sync1:arm64 (1.17.0-2) ... 1177s Setting up libapache-pom-java (33-2) ... 1177s Setting up libavahi-common-data:arm64 (0.8-13ubuntu6) ... 1177s Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... 1177s Setting up libxinerama1:arm64 (2:1.1.4-3build1) ... 1177s Setting up fonts-dejavu-mono (2.37-8) ... 1177s Setting up libxrandr2:arm64 (2:1.5.4-1) ... 1177s Setting up fonts-dejavu-core (2.37-8) ... 1177s Setting up libpcsclite1:arm64 (2.3.0-1) ... 1177s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 1177s Setting up libglapi-mesa:arm64 (24.2.3-1ubuntu1) ... 1177s Setting up libvulkan1:arm64 (1.3.290.0-1) ... 1177s Setting up libwebp7:arm64 (1.4.0-0.1) ... 1177s Setting up libxcb-dri2-0:arm64 (1.17.0-2) ... 1177s Setting up libgif7:arm64 (5.2.2-1ubuntu1) ... 1177s Setting up libxshmfence1:arm64 (1.3-1build5) ... 1177s Setting up at-spi2-common (2.54.0-1) ... 1177s Setting up libxcb-randr0:arm64 (1.17.0-2) ... 1177s Setting up libharfbuzz0b:arm64 (9.0.0-1) ... 1177s Setting up ncbi-vdb-data (3.0.2+dfsg-2build2) ... 1177s Setting up libthai-data (0.1.29-2build1) ... 1177s Setting up libwayland-egl1:arm64 (1.23.0-1) ... 1177s Setting up ca-certificates-java (20240118) ... 1177s No JRE found. Skipping Java certificates setup. 1177s Setting up libsnappy-jni (1.1.10.5-2) ... 1177s Setting up libxcomposite1:arm64 (1:0.4.5-1build3) ... 1177s Setting up libdrm-amdgpu1:arm64 (2.4.122-1) ... 1177s Setting up libwayland-client0:arm64 (1.23.0-1) ... 1177s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 1177s Setting up mesa-libgallium:arm64 (24.2.3-1ubuntu1) ... 1177s Setting up libmbedx509-1t64:arm64 (2.28.8-1) ... 1177s Setting up java-wrappers (0.5) ... 1177s Setting up libatk1.0-0t64:arm64 (2.54.0-1) ... 1177s Setting up openjdk-21-jre-headless:arm64 (21.0.5+11-1) ... 1177s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode 1177s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 1177s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 1177s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 1177s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 1177s Setting up libgbm1:arm64 (24.2.3-1ubuntu1) ... 1177s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 1177s Setting up libxtst6:arm64 (2:1.2.3-1.1build1) ... 1177s Setting up libxcursor1:arm64 (1:1.2.2-1) ... 1177s Setting up libgl1-mesa-dri:arm64 (24.2.3-1ubuntu1) ... 1177s Setting up libcommons-parent-java (56-1) ... 1177s Setting up libavahi-common3:arm64 (0.8-13ubuntu6) ... 1177s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 1177s Setting up dconf-service (0.40.0-4build2) ... 1177s Setting up libcommons-lang-java (2.6-10) ... 1177s Setting up libcommons-jexl2-java (2.1.1-6) ... 1177s Setting up libthai0:arm64 (0.1.29-2build1) ... 1177s Setting up libmbedtls14t64:arm64 (2.28.8-1) ... 1177s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 1177s Setting up libwayland-cursor0:arm64 (1.23.0-1) ... 1177s Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1) ... 1177s Setting up libsnappy-java (1.1.10.5-2) ... 1177s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 1177s Setting up libavahi-client3:arm64 (0.8-13ubuntu6) ... 1177s Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... 1177s Setting up gtk-update-icon-cache (4.16.2+ds-2) ... 1177s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 1179s Regenerating fonts cache... done. 1179s Setting up libglx-mesa0:arm64 (24.2.3-1ubuntu1) ... 1179s Setting up libglx0:arm64 (1.7.0-1build1) ... 1179s Setting up dconf-gsettings-backend:arm64 (0.40.0-4build2) ... 1180s Setting up libcommons-compress-java (1.25.0-1) ... 1180s Setting up libpango-1.0-0:arm64 (1.54.0+ds-2) ... 1180s Setting up libncbi-vdb3:arm64 (3.0.2+dfsg-2build2) ... 1180s Setting up libcairo2:arm64 (1.18.2-2) ... 1180s Setting up libgl1:arm64 (1.7.0-1build1) ... 1180s Setting up libcairo-gobject2:arm64 (1.18.2-2) ... 1180s Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-2) ... 1180s Setting up libcups2t64:arm64 (2.4.10-1ubuntu2) ... 1180s Setting up libgtk-3-common (3.24.43-3ubuntu2) ... 1180s Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-2) ... 1180s Setting up libncbi-ngs3:arm64 (3.0.3+dfsg-9ubuntu1) ... 1180s Setting up libngs-jni:arm64 (3.0.3+dfsg-9ubuntu1) ... 1180s Setting up libngs-java:arm64 (3.0.3+dfsg-9ubuntu1) ... 1180s Setting up libhtsjdk-java (4.1.0+dfsg-2) ... 1180s Setting up adwaita-icon-theme (47.0-1) ... 1180s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 1180s Setting up humanity-icon-theme (0.6.16) ... 1180s Setting up ubuntu-mono (24.04-0ubuntu1) ... 1180s Processing triggers for man-db (2.12.1-3) ... 1181s Processing triggers for libglib2.0-0t64:arm64 (2.82.1-0ubuntu1) ... 1181s Setting up libgtk-3-0t64:arm64 (3.24.43-3ubuntu2) ... 1181s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1181s Processing triggers for ca-certificates-java (20240118) ... 1181s Adding debian:ACCVRAIZ1.pem 1181s Adding debian:AC_RAIZ_FNMT-RCM.pem 1181s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 1181s Adding debian:ANF_Secure_Server_Root_CA.pem 1181s Adding debian:Actalis_Authentication_Root_CA.pem 1181s Adding debian:AffirmTrust_Commercial.pem 1181s Adding debian:AffirmTrust_Networking.pem 1181s Adding debian:AffirmTrust_Premium.pem 1181s Adding debian:AffirmTrust_Premium_ECC.pem 1181s Adding debian:Amazon_Root_CA_1.pem 1181s Adding debian:Amazon_Root_CA_2.pem 1181s Adding debian:Amazon_Root_CA_3.pem 1181s Adding debian:Amazon_Root_CA_4.pem 1181s Adding debian:Atos_TrustedRoot_2011.pem 1181s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 1181s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 1181s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 1181s Adding debian:BJCA_Global_Root_CA1.pem 1181s Adding debian:BJCA_Global_Root_CA2.pem 1181s Adding debian:Baltimore_CyberTrust_Root.pem 1181s Adding debian:Buypass_Class_2_Root_CA.pem 1181s Adding debian:Buypass_Class_3_Root_CA.pem 1181s Adding debian:CA_Disig_Root_R2.pem 1181s Adding debian:CFCA_EV_ROOT.pem 1181s Adding debian:COMODO_Certification_Authority.pem 1181s Adding debian:COMODO_ECC_Certification_Authority.pem 1181s Adding debian:COMODO_RSA_Certification_Authority.pem 1181s Adding debian:Certainly_Root_E1.pem 1181s Adding debian:Certainly_Root_R1.pem 1181s Adding debian:Certigna.pem 1181s Adding debian:Certigna_Root_CA.pem 1181s Adding debian:Certum_EC-384_CA.pem 1181s Adding debian:Certum_Trusted_Network_CA.pem 1181s Adding debian:Certum_Trusted_Network_CA_2.pem 1181s Adding debian:Certum_Trusted_Root_CA.pem 1181s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 1181s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 1181s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 1181s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 1181s Adding debian:Comodo_AAA_Services_root.pem 1181s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 1181s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 1181s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 1181s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 1181s Adding debian:DigiCert_Assured_ID_Root_CA.pem 1181s Adding debian:DigiCert_Assured_ID_Root_G2.pem 1181s Adding debian:DigiCert_Assured_ID_Root_G3.pem 1181s Adding debian:DigiCert_Global_Root_CA.pem 1181s Adding debian:DigiCert_Global_Root_G2.pem 1181s Adding debian:DigiCert_Global_Root_G3.pem 1181s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 1181s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 1181s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 1181s Adding debian:DigiCert_Trusted_Root_G4.pem 1181s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 1181s Adding debian:Entrust_Root_Certification_Authority.pem 1181s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 1181s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 1181s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 1181s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 1181s Adding debian:GLOBALTRUST_2020.pem 1181s Adding debian:GTS_Root_R1.pem 1181s Adding debian:GTS_Root_R2.pem 1181s Adding debian:GTS_Root_R3.pem 1181s Adding debian:GTS_Root_R4.pem 1181s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 1181s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 1181s Adding debian:GlobalSign_Root_CA.pem 1181s Adding debian:GlobalSign_Root_CA_-_R3.pem 1181s Adding debian:GlobalSign_Root_CA_-_R6.pem 1181s Adding debian:GlobalSign_Root_E46.pem 1181s Adding debian:GlobalSign_Root_R46.pem 1181s Adding debian:Go_Daddy_Class_2_CA.pem 1181s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 1181s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 1181s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 1181s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 1181s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 1181s Adding debian:HiPKI_Root_CA_-_G1.pem 1181s Adding debian:Hongkong_Post_Root_CA_3.pem 1181s Adding debian:ISRG_Root_X1.pem 1181s Adding debian:ISRG_Root_X2.pem 1181s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 1181s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 1181s Adding debian:Izenpe.com.pem 1181s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 1181s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 1181s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 1181s Adding debian:NAVER_Global_Root_Certification_Authority.pem 1181s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 1181s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 1181s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 1181s Adding debian:QuoVadis_Root_CA_1_G3.pem 1181s Adding debian:QuoVadis_Root_CA_2.pem 1181s Adding debian:QuoVadis_Root_CA_2_G3.pem 1181s Adding debian:QuoVadis_Root_CA_3.pem 1181s Adding debian:QuoVadis_Root_CA_3_G3.pem 1181s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 1181s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 1181s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 1181s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 1181s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 1181s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 1181s Adding debian:SZAFIR_ROOT_CA2.pem 1181s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 1181s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 1181s Adding debian:SecureSign_RootCA11.pem 1181s Adding debian:SecureTrust_CA.pem 1181s Adding debian:Secure_Global_CA.pem 1181s Adding debian:Security_Communication_ECC_RootCA1.pem 1181s Adding debian:Security_Communication_RootCA2.pem 1181s Adding debian:Security_Communication_RootCA3.pem 1181s Adding debian:Security_Communication_Root_CA.pem 1181s Adding debian:Starfield_Class_2_CA.pem 1181s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 1181s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 1181s Adding debian:SwissSign_Gold_CA_-_G2.pem 1181s Adding debian:SwissSign_Silver_CA_-_G2.pem 1181s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 1181s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 1181s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 1181s Adding debian:TWCA_Global_Root_CA.pem 1181s Adding debian:TWCA_Root_Certification_Authority.pem 1181s Adding debian:TeliaSonera_Root_CA_v1.pem 1181s Adding debian:Telia_Root_CA_v2.pem 1181s Adding debian:TrustAsia_Global_Root_CA_G3.pem 1181s Adding debian:TrustAsia_Global_Root_CA_G4.pem 1181s Adding debian:Trustwave_Global_Certification_Authority.pem 1181s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 1181s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 1181s Adding debian:TunTrust_Root_CA.pem 1181s Adding debian:UCA_Extended_Validation_Root.pem 1181s Adding debian:UCA_Global_G2_Root.pem 1181s Adding debian:USERTrust_ECC_Certification_Authority.pem 1181s Adding debian:USERTrust_RSA_Certification_Authority.pem 1181s Adding debian:XRamp_Global_CA_Root.pem 1181s Adding debian:certSIGN_ROOT_CA.pem 1181s Adding debian:certSIGN_Root_CA_G2.pem 1181s Adding debian:e-Szigno_Root_CA_2017.pem 1181s Adding debian:ePKI_Root_Certification_Authority.pem 1181s Adding debian:emSign_ECC_Root_CA_-_C3.pem 1181s Adding debian:emSign_ECC_Root_CA_-_G3.pem 1181s Adding debian:emSign_Root_CA_-_C1.pem 1181s Adding debian:emSign_Root_CA_-_G1.pem 1181s Adding debian:vTrus_ECC_Root_CA.pem 1181s Adding debian:vTrus_Root_CA.pem 1181s done. 1181s Setting up openjdk-21-jre:arm64 (21.0.5+11-1) ... 1181s Setting up default-jre-headless (2:1.21-76) ... 1181s Setting up default-jre (2:1.21-76) ... 1181s Setting up pilon (1.24-3) ... 1181s Setting up autopkgtest-satdep (0) ... 1187s (Reading database ... 94242 files and directories currently installed.) 1187s Removing autopkgtest-satdep (0) ... 1194s autopkgtest [19:23:35]: test pilon-run-unit-test: [----------------------- 1195s Pilon version [COMMIT] [DATE] 1195s Genome: NC_045512.2.fasta 1195s Fixing snps, indels, gaps, local 1195s Input genome size: 29903 1195s Scanning BAMs 1195s SRR11728627.sorted.bam: 1250 reads, 0 filtered, 1009 mapped, 0 proper, 0 stray, Unpaired 100% 124+/-36, max 231 unpaired 1195s Processing NC_045512.2:1-29903 1195s unpaired SRR11728627.sorted.bam: coverage 4 1195s Total Reads: 1009, Coverage: 4, minDepth: 5 1195s Confirmed 4501 of 29903 bases (15.05%) 1195s Corrected 2 snps; 0 ambiguous bases; corrected 0 small insertions totaling 0 bases, 1 small deletions totaling 1 bases 1195s Large collapsed region: NC_045512.2:7701-17739 size 10039 1195s # Attempting to fix local continuity breaks 1195s # fix break: NC_045512.2:5582-8928 0 -0 +0 NoSolution 1195s # fix break: NC_045512.2:9224-10520 0 -0 +0 NoSolution 1195s # fix break: NC_045512.2:10739-28099 0 -0 +0 NoSolution 1195s NC_045512.2:1-29903 log: 1195s Finished processing NC_045512.2:1-29903 1195s Writing updated NC_045512.2_pilon to pilon.fasta 1196s Mean unpaired coverage: 4 1196s Mean total coverage: 4 1196s autopkgtest [19:23:37]: test pilon-run-unit-test: -----------------------] 1196s pilon-run-unit-test PASS 1196s autopkgtest [19:23:37]: test pilon-run-unit-test: - - - - - - - - - - results - - - - - - - - - - 1197s autopkgtest [19:23:38]: @@@@@@@@@@@@@@@@@@@@ summary 1197s beagle-run-sample-analysis PASS 1197s chromhmm-run-sample-analysis PASS 1197s drop-seq-run-unit-test PASS 1197s fastqc-run-unit-test PASS 1197s jalview-run-unit-test PASS 1197s command1 PASS 1197s picard-tools-run-unit-test PASS 1197s pilon-run-unit-test PASS 1209s nova [W] Skipping flock in bos03-arm64 1209s Creating nova instance adt-plucky-arm64-htsjdk-20241101-190341-juju-7f2275-prod-proposed-migration-environment-14-9025d7f8-e81a-4e21-a7b1-5c8145caa910 from image adt/ubuntu-plucky-arm64-server-20241101.img (UUID 520a937f-514a-4e80-b76b-163a8c247e3e)... 1209s nova [W] Skipping flock in bos03-arm64 1209s Creating nova instance adt-plucky-arm64-htsjdk-20241101-190341-juju-7f2275-prod-proposed-migration-environment-14-9025d7f8-e81a-4e21-a7b1-5c8145caa910 from image adt/ubuntu-plucky-arm64-server-20241101.img (UUID 520a937f-514a-4e80-b76b-163a8c247e3e)... 1209s nova [W] Skipping flock in bos03-arm64 1209s Creating nova instance adt-plucky-arm64-htsjdk-20241101-190341-juju-7f2275-prod-proposed-migration-environment-14-9025d7f8-e81a-4e21-a7b1-5c8145caa910 from image adt/ubuntu-plucky-arm64-server-20241101.img (UUID 520a937f-514a-4e80-b76b-163a8c247e3e)... 1209s nova [W] Skipping flock in bos03-arm64 1209s Creating nova instance adt-plucky-arm64-htsjdk-20241101-190341-juju-7f2275-prod-proposed-migration-environment-14-9025d7f8-e81a-4e21-a7b1-5c8145caa910 from image adt/ubuntu-plucky-arm64-server-20241101.img (UUID 520a937f-514a-4e80-b76b-163a8c247e3e)... 1209s nova [W] Skipping flock in bos03-arm64 1209s Creating nova instance adt-plucky-arm64-htsjdk-20241101-190341-juju-7f2275-prod-proposed-migration-environment-14-9025d7f8-e81a-4e21-a7b1-5c8145caa910 from image adt/ubuntu-plucky-arm64-server-20241101.img (UUID 520a937f-514a-4e80-b76b-163a8c247e3e)... 1209s nova [W] Skipping flock in bos03-arm64 1209s Creating nova instance adt-plucky-arm64-htsjdk-20241101-190341-juju-7f2275-prod-proposed-migration-environment-14-9025d7f8-e81a-4e21-a7b1-5c8145caa910 from image adt/ubuntu-plucky-arm64-server-20241101.img (UUID 520a937f-514a-4e80-b76b-163a8c247e3e)... 1209s nova [W] Skipping flock in bos03-arm64 1209s Creating nova instance adt-plucky-arm64-htsjdk-20241101-190341-juju-7f2275-prod-proposed-migration-environment-14-9025d7f8-e81a-4e21-a7b1-5c8145caa910 from image adt/ubuntu-plucky-arm64-server-20241101.img (UUID 520a937f-514a-4e80-b76b-163a8c247e3e)... 1209s nova [W] Skipping flock in bos03-arm64 1209s Creating nova instance adt-plucky-arm64-htsjdk-20241101-190341-juju-7f2275-prod-proposed-migration-environment-14-9025d7f8-e81a-4e21-a7b1-5c8145caa910 from image adt/ubuntu-plucky-arm64-server-20241101.img (UUID 520a937f-514a-4e80-b76b-163a8c247e3e)...