0s autopkgtest [16:08:46]: starting date and time: 2024-11-14 16:08:46+0000 0s autopkgtest [16:08:46]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [16:08:46]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.mfoo_5ay/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy --apt-upgrade hnswlib --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=numpy/1:1.26.4+ds-11ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-42.secgroup --name adt-plucky-arm64-hnswlib-20241114-160846-juju-7f2275-prod-proposed-migration-environment-20-84d6ead9-0bf3-4b05-98e1-614395204b5a --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 80s autopkgtest [16:10:06]: testbed dpkg architecture: arm64 81s autopkgtest [16:10:07]: testbed apt version: 2.9.8 81s autopkgtest [16:10:07]: @@@@@@@@@@@@@@@@@@@@ test bed setup 82s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 82s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [105 kB] 82s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 82s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [966 kB] 82s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 82s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [138 kB] 82s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 82s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [724 kB] 82s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [6012 B] 83s Fetched 2085 kB in 1s (2246 kB/s) 83s Reading package lists... 85s Reading package lists... 86s Building dependency tree... 86s Reading state information... 87s Calculating upgrade... 87s The following packages will be upgraded: 87s pastebinit python3-systemd 87s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 87s Need to get 61.6 kB of archives. 87s After this operation, 347 kB of additional disk space will be used. 87s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 pastebinit all 1.7.1-1 [14.9 kB] 88s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-systemd arm64 235-1build5 [46.7 kB] 88s Fetched 61.6 kB in 0s (176 kB/s) 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79925 files and directories currently installed.) 88s Preparing to unpack .../pastebinit_1.7.1-1_all.deb ... 88s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ... 88s Preparing to unpack .../python3-systemd_235-1build5_arm64.deb ... 89s Unpacking python3-systemd (235-1build5) over (235-1build4) ... 89s Setting up pastebinit (1.7.1-1) ... 89s Setting up python3-systemd (235-1build5) ... 89s Processing triggers for man-db (2.12.1-3) ... 90s Reading package lists... 90s Building dependency tree... 90s Reading state information... 91s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 91s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 91s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 91s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 91s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 92s Reading package lists... 92s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s Calculating upgrade... 94s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 94s Reading package lists... 94s Building dependency tree... 94s Reading state information... 95s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 98s autopkgtest [16:10:24]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 98s autopkgtest [16:10:24]: @@@@@@@@@@@@@@@@@@@@ apt-source hnswlib 101s Get:1 http://ftpmaster.internal/ubuntu plucky/universe hnswlib 0.8.0-1build1 (dsc) [2255 B] 101s Get:2 http://ftpmaster.internal/ubuntu plucky/universe hnswlib 0.8.0-1build1 (tar) [67.2 kB] 101s Get:3 http://ftpmaster.internal/ubuntu plucky/universe hnswlib 0.8.0-1build1 (diff) [11.4 kB] 101s gpgv: Signature made Thu Apr 11 11:11:31 2024 UTC 101s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 101s gpgv: Can't check signature: No public key 101s dpkg-source: warning: cannot verify inline signature for ./hnswlib_0.8.0-1build1.dsc: no acceptable signature found 101s autopkgtest [16:10:27]: testing package hnswlib version 0.8.0-1build1 101s autopkgtest [16:10:27]: build not needed 102s autopkgtest [16:10:28]: test run-unit-test: preparing testbed 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 104s Starting pkgProblemResolver with broken count: 0 104s Starting 2 pkgProblemResolver with broken count: 0 104s Done 105s The following additional packages will be installed: 105s libblas3 libexpat1-dev libgfortran5 libhnswlib-dev liblapack3 libpython3-dev 105s libpython3.12-dev pybind11-dev python3-all python3-hnswlib python3-numpy 105s python3-pybind11 zlib1g-dev 105s Suggested packages: 105s pybind11-doc gcc gfortran python-numpy-doc python3-dev python3-pytest 105s Recommended packages: 105s libeigen3-dev 105s The following NEW packages will be installed: 105s autopkgtest-satdep libblas3 libexpat1-dev libgfortran5 libhnswlib-dev 105s liblapack3 libpython3-dev libpython3.12-dev pybind11-dev python3-all 105s python3-hnswlib python3-numpy python3-pybind11 zlib1g-dev 105s 0 upgraded, 14 newly installed, 0 to remove and 0 not upgraded. 105s Need to get 14.1 MB/14.1 MB of archives. 105s After this operation, 68.3 MB of additional disk space will be used. 105s Get:1 /tmp/autopkgtest.MEdxpU/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [728 B] 106s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 106s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libexpat1-dev arm64 2.6.2-2 [128 kB] 106s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 106s Get:5 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhnswlib-dev all 0.8.0-1build1 [24.5 kB] 106s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 106s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 106s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.12-dev arm64 3.12.7-3 [5565 kB] 106s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3-dev arm64 3.12.6-0ubuntu1 [10.2 kB] 106s Get:10 http://ftpmaster.internal/ubuntu plucky/universe arm64 pybind11-dev all 2.13.6-1 [168 kB] 106s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all arm64 3.12.6-0ubuntu1 [886 B] 106s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-numpy arm64 1:1.26.4+ds-11ubuntu1 [4149 kB] 107s Get:13 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pybind11 all 2.13.6-1 [176 kB] 107s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-hnswlib arm64 0.8.0-1build1 [148 kB] 107s Fetched 14.1 MB in 1s (12.0 MB/s) 107s Selecting previously unselected package libblas3:arm64. 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79930 files and directories currently installed.) 107s Preparing to unpack .../00-libblas3_3.12.0-3build2_arm64.deb ... 107s Unpacking libblas3:arm64 (3.12.0-3build2) ... 107s Selecting previously unselected package libexpat1-dev:arm64. 107s Preparing to unpack .../01-libexpat1-dev_2.6.2-2_arm64.deb ... 107s Unpacking libexpat1-dev:arm64 (2.6.2-2) ... 107s Selecting previously unselected package libgfortran5:arm64. 107s Preparing to unpack .../02-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 107s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 108s Selecting previously unselected package libhnswlib-dev. 108s Preparing to unpack .../03-libhnswlib-dev_0.8.0-1build1_all.deb ... 108s Unpacking libhnswlib-dev (0.8.0-1build1) ... 108s Selecting previously unselected package liblapack3:arm64. 108s Preparing to unpack .../04-liblapack3_3.12.0-3build2_arm64.deb ... 108s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 108s Selecting previously unselected package zlib1g-dev:arm64. 108s Preparing to unpack .../05-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 108s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 108s Selecting previously unselected package libpython3.12-dev:arm64. 108s Preparing to unpack .../06-libpython3.12-dev_3.12.7-3_arm64.deb ... 108s Unpacking libpython3.12-dev:arm64 (3.12.7-3) ... 108s Selecting previously unselected package libpython3-dev:arm64. 108s Preparing to unpack .../07-libpython3-dev_3.12.6-0ubuntu1_arm64.deb ... 108s Unpacking libpython3-dev:arm64 (3.12.6-0ubuntu1) ... 108s Selecting previously unselected package pybind11-dev. 108s Preparing to unpack .../08-pybind11-dev_2.13.6-1_all.deb ... 108s Unpacking pybind11-dev (2.13.6-1) ... 108s Selecting previously unselected package python3-all. 108s Preparing to unpack .../09-python3-all_3.12.6-0ubuntu1_arm64.deb ... 108s Unpacking python3-all (3.12.6-0ubuntu1) ... 108s Selecting previously unselected package python3-numpy. 108s Preparing to unpack .../10-python3-numpy_1%3a1.26.4+ds-11ubuntu1_arm64.deb ... 108s Unpacking python3-numpy (1:1.26.4+ds-11ubuntu1) ... 108s Selecting previously unselected package python3-pybind11. 108s Preparing to unpack .../11-python3-pybind11_2.13.6-1_all.deb ... 108s Unpacking python3-pybind11 (2.13.6-1) ... 108s Selecting previously unselected package python3-hnswlib:arm64. 108s Preparing to unpack .../12-python3-hnswlib_0.8.0-1build1_arm64.deb ... 108s Unpacking python3-hnswlib:arm64 (0.8.0-1build1) ... 109s Selecting previously unselected package autopkgtest-satdep. 109s Preparing to unpack .../13-1-autopkgtest-satdep.deb ... 109s Unpacking autopkgtest-satdep (0) ... 109s Setting up python3-all (3.12.6-0ubuntu1) ... 109s Setting up libblas3:arm64 (3.12.0-3build2) ... 109s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 109s Setting up libexpat1-dev:arm64 (2.6.2-2) ... 109s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 109s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 109s Setting up libhnswlib-dev (0.8.0-1build1) ... 109s Setting up liblapack3:arm64 (3.12.0-3build2) ... 109s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 109s Setting up libpython3.12-dev:arm64 (3.12.7-3) ... 109s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ... 111s Setting up libpython3-dev:arm64 (3.12.6-0ubuntu1) ... 111s Setting up pybind11-dev (2.13.6-1) ... 111s Setting up python3-pybind11 (2.13.6-1) ... 111s Setting up python3-hnswlib:arm64 (0.8.0-1build1) ... 111s Setting up autopkgtest-satdep (0) ... 111s Processing triggers for man-db (2.12.1-3) ... 112s Processing triggers for libc-bin (2.40-1ubuntu3) ... 115s (Reading database ... 81314 files and directories currently installed.) 115s Removing autopkgtest-satdep (0) ... 116s autopkgtest [16:10:42]: test run-unit-test: [----------------------- 117s testRandomSelf (bindings_test.RandomSelfTestCase.testRandomSelf) ... ok 124s testRandomSelf (bindings_test_filter.RandomSelfTestCase.testRandomSelf) ... ok 124s testGettingItems (bindings_test_getdata.RandomSelfTestCase.testGettingItems) ... ok 131s testRandomSelf (bindings_test_labels.RandomSelfTestCase.testRandomSelf) ... ok 132s testMetadata (bindings_test_metadata.RandomSelfTestCase.testMetadata) ... ok 135s test_cosine_space (bindings_test_pickle.PickleUnitTests.test_cosine_space) ... ok 137s test_inner_product_space (bindings_test_pickle.PickleUnitTests.test_inner_product_space) ... ok 138s test_l2_space (bindings_test_pickle.PickleUnitTests.test_l2_space) ... ok 176s testRandomSelf (bindings_test_recall.RandomSelfTestCase.testRandomSelf) ... ok 176s testRandomSelf (bindings_test_replace.RandomSelfTestCase.testRandomSelf) 186s Tests if replace of deleted elements works correctly ... ok 186s test_recall_degradation (bindings_test_replace.RandomSelfTestCase.test_recall_degradation) 200s Compares recall of the index with replaced elements and without ... ok 214s testRandomSelf (bindings_test_resize.RandomSelfTestCase.testRandomSelf) ... ok 214s testRandomSelf (bindings_test_spaces.RandomSelfTestCase.testRandomSelf) ... ok 264s testRandomSelf (bindings_test_stress_mt_replace.RandomSelfTestCase.testRandomSelf) ... Adding first batch of 5000 elements 264s Saving index to 'first_half.bin' 264s 264s Loading index from 'first_half.bin' 264s 264s Adding the second batch of 5000 elements 264s Adding 10000 elements 264s Querying only even elements 264s 264s **** Getting the data by label test **** 264s 264s Adding all elements (10000) 264s 264s **** Index save-load test **** 264s 264s Adding first batch of 5000 elements 264s Saving index to 'first_half.bin' 264s Saved. Deleting... 264s Deleted 264s 264s **** Mark delete test **** 264s 264s Re-initiating 264s 264s Loading index from 'first_half.bin' 264s 264s Adding the second batch of 5000 elements 264s All the data in data1 are removed 264s All the data in data1 are restored 264s 264s **** Index save-load test **** 264s 264s Adding first batch of 5000 elements 264s Saving index to 'first_half.bin' 264s Saved. Deleting... 264s Deleted 264s 264s **** Mark delete test **** 264s 264s Re-initiating 264s 264s Loading index from 'first_half.bin' 264s 264s Adding the second batch of 5000 elements 264s All the data in data1 are removed 264s All the data in data1 are restored 264s Adding all elements (10000) 264s Running pickle tests for 264s Running pickle tests for 264s Warning: 1 labels are missing from ann results (k=25, err_thresh=5) 264s Warning: 1 labels are missing from ann results (k=25, err_thresh=5) 264s Warning: 1 labels are missing from ann results (k=25, err_thresh=5) 264s Warning: 1 ann distance values are different from brute-force values (total # of values=2500, dists_thresh=50) 264s Warning: 1 labels are missing from ann results (k=25, err_thresh=5) 264s Warning: 1 labels are missing from ann results (k=25, err_thresh=5) 264s Warning: 1 labels are missing from ann results (k=25, err_thresh=5) 264s Warning: 1 ann distance values are different from brute-force values (total # of values=2500, dists_thresh=50) 264s Running pickle tests for 264s Adding batch of 100000 elements 264s Indices built 264s recall is : 0.995 264s Saving index to 'bf_index.bin' 264s 264s Loading index from 'bf_index.bin' 264s 264s recall after reloading is : 0.995 264s Generating data 264s Adding batch 1 264s Adding batch 2 264s Deleting neighbors of batch 2 264s All the neighbors of data2 are removed 264s Inserting batch 3 by replacing deleted elements 264s Checking that remaining labels are in index 264s Deleting batch 3 264s Saving index to index.bin 264s Loading index from index.bin 264s Inserting batch 4 by replacing deleted elements 264s Checking recall 264s Recall for the 4 batch: 0.9994 264s Deleting batch 4 264s Testing pickle serialization 264s Inserting batch 3 by replacing deleted elements 264s Checking recall 264s Recall for the 3 batch: 1.0 264s Generating data 264s Adding data 264s recall with replace: 0.97735 264s recall without replace: 0.98524 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s 264s **** Index resize test **** 264s 264s Adding first batch of 5000 elements 264s Resizing the index 264s Adding the second batch of 5000 elements 264s ok 264s 264s ---------------------------------------------------------------------- 264s Ran 14 tests in 147.569s 264s 264s OK 265s autopkgtest [16:13:11]: test run-unit-test: -----------------------] 265s autopkgtest [16:13:11]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 265s run-unit-test PASS 265s autopkgtest [16:13:11]: @@@@@@@@@@@@@@@@@@@@ summary 265s run-unit-test PASS 278s nova [W] Skipping flock in bos03-arm64 278s Creating nova instance adt-plucky-arm64-hnswlib-20241114-160846-juju-7f2275-prod-proposed-migration-environment-20-84d6ead9-0bf3-4b05-98e1-614395204b5a from image adt/ubuntu-plucky-arm64-server-20241114.img (UUID 4472f5f7-859f-4441-9e8e-9550fb35f210)...