0s autopkgtest [09:20:25]: starting date and time: 2024-11-13 09:20:25+0000 0s autopkgtest [09:20:25]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [09:20:25]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.mytkkair/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade h5sparse --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-17.secgroup --name adt-plucky-arm64-h5sparse-20241113-092025-juju-7f2275-prod-proposed-migration-environment-20-8d2c7b24-0b5f-4744-a39e-f21bcd0260b9 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 66s autopkgtest [09:21:31]: testbed dpkg architecture: arm64 67s autopkgtest [09:21:32]: testbed apt version: 2.9.8 67s autopkgtest [09:21:32]: @@@@@@@@@@@@@@@@@@@@ test bed setup 67s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 68s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 68s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 68s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 68s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 69s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 69s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 69s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 70s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 70s Fetched 1793 kB in 2s (797 kB/s) 70s Reading package lists... 72s Reading package lists... 73s Building dependency tree... 73s Reading state information... 73s Calculating upgrade... 73s The following NEW packages will be installed: 73s python3.13-gdbm 73s The following packages will be upgraded: 73s libpython3-stdlib python3 python3-gdbm python3-minimal 74s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 74s Need to get 101 kB of archives. 74s After this operation, 141 kB of additional disk space will be used. 74s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 74s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 74s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 74s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 74s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 74s Fetched 101 kB in 0s (268 kB/s) 75s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 75s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 75s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 75s Setting up python3-minimal (3.12.7-1) ... 75s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 75s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 75s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 75s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 75s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 75s Selecting previously unselected package python3.13-gdbm. 75s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 75s Unpacking python3.13-gdbm (3.13.0-2) ... 75s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 75s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 75s Setting up python3.13-gdbm (3.13.0-2) ... 75s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 75s Setting up python3 (3.12.7-1) ... 75s Setting up python3-gdbm:arm64 (3.12.7-1) ... 75s Processing triggers for man-db (2.12.1-3) ... 76s Reading package lists... 77s Building dependency tree... 77s Reading state information... 77s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 78s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 78s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 78s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 78s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 79s Reading package lists... 79s Reading package lists... 79s Building dependency tree... 79s Reading state information... 80s Calculating upgrade... 80s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 80s Reading package lists... 80s Building dependency tree... 80s Reading state information... 81s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 84s autopkgtest [09:21:49]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 84s autopkgtest [09:21:49]: @@@@@@@@@@@@@@@@@@@@ apt-source h5sparse 85s Get:1 http://ftpmaster.internal/ubuntu plucky/universe h5sparse 0.1.0-7 (dsc) [1534 B] 85s Get:2 http://ftpmaster.internal/ubuntu plucky/universe h5sparse 0.1.0-7 (tar) [10.5 kB] 85s Get:3 http://ftpmaster.internal/ubuntu plucky/universe h5sparse 0.1.0-7 (diff) [4348 B] 86s gpgv: Signature made Sun Oct 1 17:20:46 2023 UTC 86s gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA 86s gpgv: Can't check signature: No public key 86s dpkg-source: warning: cannot verify inline signature for ./h5sparse_0.1.0-7.dsc: no acceptable signature found 86s autopkgtest [09:21:51]: testing package h5sparse version 0.1.0-7 86s autopkgtest [09:21:51]: build not needed 87s autopkgtest [09:21:52]: test run-unit-test: preparing testbed 88s Reading package lists... 88s Building dependency tree... 88s Reading state information... 89s Starting pkgProblemResolver with broken count: 0 89s Starting 2 pkgProblemResolver with broken count: 0 89s Done 89s The following additional packages will be installed: 89s libaec0 libblas3 libgfortran5 libhdf5-103-1t64 libhdf5-hl-100t64 liblapack3 89s liblbfgsb0 liblzf1 libpython3.13-minimal libpython3.13-stdlib libsz2 89s python3-all python3-decorator python3-h5py python3-h5py-serial 89s python3-h5sparse python3-iniconfig python3-numpy python3-packaging 89s python3-pluggy python3-pytest python3-scipy python3-six python3.13 89s python3.13-minimal 89s Suggested packages: 89s python-h5py-doc gcc gfortran python-numpy-doc python3-dev python-scipy-doc 89s python3.13-venv python3.13-doc binfmt-support 89s Recommended packages: 89s g++ | c++-compiler python3-pil 90s The following NEW packages will be installed: 90s autopkgtest-satdep libaec0 libblas3 libgfortran5 libhdf5-103-1t64 90s libhdf5-hl-100t64 liblapack3 liblbfgsb0 liblzf1 libpython3.13-minimal 90s libpython3.13-stdlib libsz2 python3-all python3-decorator python3-h5py 90s python3-h5py-serial python3-h5sparse python3-iniconfig python3-numpy 90s python3-packaging python3-pluggy python3-pytest python3-scipy python3-six 90s python3.13 python3.13-minimal 90s 0 upgraded, 26 newly installed, 0 to remove and 0 not upgraded. 90s Need to get 31.4 MB/31.4 MB of archives. 90s After this operation, 130 MB of additional disk space will be used. 90s Get:1 /tmp/autopkgtest.rdCm1T/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [720 B] 90s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 90s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 91s Get:4 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 91s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 91s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 91s Get:7 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 91s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB] 91s Get:9 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB] 91s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 91s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 91s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 91s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 92s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 92s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 92s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 92s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 92s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py-serial arm64 3.11.0-5ubuntu1 [1064 kB] 92s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py all 3.11.0-5ubuntu1 [7974 B] 92s Get:20 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB] 93s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-six all 1.16.0-7 [13.1 kB] 93s Get:22 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5sparse all 0.1.0-7 [6732 B] 93s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 93s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 93s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 93s Get:26 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 93s Fetched 31.4 MB in 4s (8886 kB/s) 93s Selecting previously unselected package libpython3.13-minimal:arm64. 93s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 94s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ... 94s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 94s Selecting previously unselected package python3.13-minimal. 94s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_arm64.deb ... 94s Unpacking python3.13-minimal (3.13.0-2) ... 94s Selecting previously unselected package libaec0:arm64. 94s Preparing to unpack .../02-libaec0_1.1.3-1_arm64.deb ... 94s Unpacking libaec0:arm64 (1.1.3-1) ... 94s Selecting previously unselected package libblas3:arm64. 94s Preparing to unpack .../03-libblas3_3.12.0-3build2_arm64.deb ... 94s Unpacking libblas3:arm64 (3.12.0-3build2) ... 94s Selecting previously unselected package libgfortran5:arm64. 94s Preparing to unpack .../04-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 94s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package libsz2:arm64. 94s Preparing to unpack .../05-libsz2_1.1.3-1_arm64.deb ... 94s Unpacking libsz2:arm64 (1.1.3-1) ... 94s Selecting previously unselected package libhdf5-103-1t64:arm64. 94s Preparing to unpack .../06-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 94s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 94s Selecting previously unselected package libhdf5-hl-100t64:arm64. 94s Preparing to unpack .../07-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_arm64.deb ... 94s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 94s Selecting previously unselected package liblapack3:arm64. 94s Preparing to unpack .../08-liblapack3_3.12.0-3build2_arm64.deb ... 94s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 94s Selecting previously unselected package liblbfgsb0:arm64. 94s Preparing to unpack .../09-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ... 94s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 94s Selecting previously unselected package liblzf1:arm64. 94s Preparing to unpack .../10-liblzf1_3.6-4_arm64.deb ... 94s Unpacking liblzf1:arm64 (3.6-4) ... 94s Selecting previously unselected package libpython3.13-stdlib:arm64. 94s Preparing to unpack .../11-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 94s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 94s Selecting previously unselected package python3.13. 94s Preparing to unpack .../12-python3.13_3.13.0-2_arm64.deb ... 94s Unpacking python3.13 (3.13.0-2) ... 94s Selecting previously unselected package python3-all. 94s Preparing to unpack .../13-python3-all_3.12.7-1_arm64.deb ... 94s Unpacking python3-all (3.12.7-1) ... 94s Selecting previously unselected package python3-decorator. 94s Preparing to unpack .../14-python3-decorator_5.1.1-5_all.deb ... 94s Unpacking python3-decorator (5.1.1-5) ... 94s Selecting previously unselected package python3-numpy. 94s Preparing to unpack .../15-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 94s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 94s Selecting previously unselected package python3-h5py-serial. 95s Preparing to unpack .../16-python3-h5py-serial_3.11.0-5ubuntu1_arm64.deb ... 95s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 95s Selecting previously unselected package python3-h5py. 95s Preparing to unpack .../17-python3-h5py_3.11.0-5ubuntu1_all.deb ... 95s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 95s Selecting previously unselected package python3-scipy. 95s Preparing to unpack .../18-python3-scipy_1.13.1-5_arm64.deb ... 95s Unpacking python3-scipy (1.13.1-5) ... 95s Selecting previously unselected package python3-six. 95s Preparing to unpack .../19-python3-six_1.16.0-7_all.deb ... 95s Unpacking python3-six (1.16.0-7) ... 95s Selecting previously unselected package python3-h5sparse. 95s Preparing to unpack .../20-python3-h5sparse_0.1.0-7_all.deb ... 95s Unpacking python3-h5sparse (0.1.0-7) ... 95s Selecting previously unselected package python3-iniconfig. 95s Preparing to unpack .../21-python3-iniconfig_1.1.1-2_all.deb ... 95s Unpacking python3-iniconfig (1.1.1-2) ... 95s Selecting previously unselected package python3-packaging. 95s Preparing to unpack .../22-python3-packaging_24.1-1_all.deb ... 95s Unpacking python3-packaging (24.1-1) ... 95s Selecting previously unselected package python3-pluggy. 95s Preparing to unpack .../23-python3-pluggy_1.5.0-1_all.deb ... 95s Unpacking python3-pluggy (1.5.0-1) ... 95s Selecting previously unselected package python3-pytest. 95s Preparing to unpack .../24-python3-pytest_8.3.3-1_all.deb ... 95s Unpacking python3-pytest (8.3.3-1) ... 95s Selecting previously unselected package autopkgtest-satdep. 95s Preparing to unpack .../25-1-autopkgtest-satdep.deb ... 95s Unpacking autopkgtest-satdep (0) ... 95s Setting up python3-iniconfig (1.1.1-2) ... 96s Setting up libaec0:arm64 (1.1.3-1) ... 96s Setting up python3-six (1.16.0-7) ... 96s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 96s Setting up python3-decorator (5.1.1-5) ... 96s Setting up libblas3:arm64 (3.12.0-3build2) ... 96s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 96s Setting up python3-packaging (24.1-1) ... 96s Setting up liblzf1:arm64 (3.6-4) ... 96s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 96s Setting up python3-pluggy (1.5.0-1) ... 96s Setting up python3.13-minimal (3.13.0-2) ... 97s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 97s Setting up libsz2:arm64 (1.1.3-1) ... 97s Setting up liblapack3:arm64 (3.12.0-3build2) ... 97s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 97s Setting up python3.13 (3.13.0-2) ... 98s Setting up python3-pytest (8.3.3-1) ... 99s Setting up python3-all (3.12.7-1) ... 99s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 103s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 103s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 103s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 103s Setting up python3-scipy (1.13.1-5) ... 110s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 111s Setting up python3-h5py (3.11.0-5ubuntu1) ... 113s Setting up python3-h5sparse (0.1.0-7) ... 113s Setting up autopkgtest-satdep (0) ... 113s Processing triggers for systemd (256.5-2ubuntu4) ... 113s Processing triggers for man-db (2.12.1-3) ... 113s Processing triggers for libc-bin (2.40-1ubuntu3) ... 122s (Reading database ... 83341 files and directories currently installed.) 122s Removing autopkgtest-satdep (0) ... 123s autopkgtest [09:22:28]: test run-unit-test: [----------------------- 123s ============================= test session starts ============================== 123s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 123s cachedir: .pytest_cache 123s rootdir: /tmp/autopkgtest.rdCm1T/build.kp2/src 123s plugins: typeguard-4.4.1 123s collecting ... collected 0 items / 1 error 123s 123s ==================================== ERRORS ==================================== 123s ______________________ ERROR collecting h5sparse/tests.py ______________________ 123s ImportError while importing test module '/tmp/autopkgtest.rdCm1T/build.kp2/src/h5sparse/tests.py'. 123s Hint: make sure your test modules/packages have valid Python names. 123s Traceback: 123s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 123s from . import _debian_h5py_serial as _h5py 123s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 123s from . import _errors 123s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 123s 123s During handling of the above exception, another exception occurred: 123s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 123s return _bootstrap._gcd_import(name[level:], package, level) 123s h5sparse/__init__.py:2: in 123s from .h5sparse import Group, File, Dataset # noqa: F401 123s h5sparse/h5sparse.py:2: in 123s import h5py 123s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 123s from . import _debian_h5py_mpi as _h5py 123s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 123s =============================== warnings summary =============================== 123s h5sparse/__init__.py:1 123s /tmp/autopkgtest.rdCm1T/build.kp2/src/h5sparse/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 123s import pkg_resources 123s 123s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 123s =========================== short test summary info ============================ 123s ERROR h5sparse/tests.py 123s !!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!! 123s ========================= 1 warning, 1 error in 0.30s ========================== 124s autopkgtest [09:22:29]: test run-unit-test: -----------------------] 124s run-unit-test FAIL non-zero exit status 2 124s autopkgtest [09:22:29]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 125s autopkgtest [09:22:30]: test autodep8-python3: preparing testbed 229s autopkgtest [09:24:14]: testbed dpkg architecture: arm64 229s autopkgtest [09:24:14]: testbed apt version: 2.9.8 229s autopkgtest [09:24:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 231s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 231s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 231s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 231s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 231s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 231s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 231s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 231s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 231s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 232s Fetched 1793 kB in 1s (1818 kB/s) 232s Reading package lists... 234s Reading package lists... 235s Building dependency tree... 235s Reading state information... 236s Calculating upgrade... 237s The following NEW packages will be installed: 237s python3.13-gdbm 237s The following packages will be upgraded: 237s libpython3-stdlib python3 python3-gdbm python3-minimal 237s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 237s Need to get 101 kB of archives. 237s After this operation, 141 kB of additional disk space will be used. 237s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 237s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 237s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 237s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 237s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 238s Fetched 101 kB in 0s (277 kB/s) 238s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 238s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 238s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 238s Setting up python3-minimal (3.12.7-1) ... 239s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 239s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 239s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 239s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 239s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 239s Selecting previously unselected package python3.13-gdbm. 239s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 239s Unpacking python3.13-gdbm (3.13.0-2) ... 239s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 239s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 239s Setting up python3.13-gdbm (3.13.0-2) ... 239s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 239s Setting up python3 (3.12.7-1) ... 240s Setting up python3-gdbm:arm64 (3.12.7-1) ... 240s Processing triggers for man-db (2.12.1-3) ... 241s Reading package lists... 242s Building dependency tree... 242s Reading state information... 243s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 244s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 244s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 244s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 244s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 246s Reading package lists... 246s Reading package lists... 246s Building dependency tree... 246s Reading state information... 247s Calculating upgrade... 248s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 248s Reading package lists... 249s Building dependency tree... 249s Reading state information... 250s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 254s Reading package lists... 255s Building dependency tree... 255s Reading state information... 256s Starting pkgProblemResolver with broken count: 0 256s Starting 2 pkgProblemResolver with broken count: 0 256s Done 257s The following additional packages will be installed: 257s libaec0 libblas3 libgfortran5 libhdf5-103-1t64 libhdf5-hl-100t64 liblapack3 257s liblbfgsb0 liblzf1 libpython3.13-minimal libpython3.13-stdlib libsz2 257s python3-all python3-decorator python3-h5py python3-h5py-serial 257s python3-h5sparse python3-numpy python3-scipy python3-six python3.13 257s python3.13-minimal 257s Suggested packages: 257s python-h5py-doc gcc gfortran python-numpy-doc python3-dev python3-pytest 257s python-scipy-doc python3.13-venv python3.13-doc binfmt-support 257s Recommended packages: 257s g++ | c++-compiler python3-pil 257s The following NEW packages will be installed: 257s autopkgtest-satdep libaec0 libblas3 libgfortran5 libhdf5-103-1t64 257s libhdf5-hl-100t64 liblapack3 liblbfgsb0 liblzf1 libpython3.13-minimal 257s libpython3.13-stdlib libsz2 python3-all python3-decorator python3-h5py 257s python3-h5py-serial python3-h5sparse python3-numpy python3-scipy python3-six 257s python3.13 python3.13-minimal 257s 0 upgraded, 22 newly installed, 0 to remove and 0 not upgraded. 257s Need to get 31.1 MB/31.1 MB of archives. 257s After this operation, 129 MB of additional disk space will be used. 257s Get:1 /tmp/autopkgtest.rdCm1T/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [716 B] 257s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 258s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 258s Get:4 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 258s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 258s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 258s Get:7 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 258s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB] 258s Get:9 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB] 258s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 258s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 258s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 258s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 258s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 258s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 258s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 258s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 258s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py-serial arm64 3.11.0-5ubuntu1 [1064 kB] 258s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py all 3.11.0-5ubuntu1 [7974 B] 258s Get:20 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB] 259s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-six all 1.16.0-7 [13.1 kB] 259s Get:22 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5sparse all 0.1.0-7 [6732 B] 259s Fetched 31.1 MB in 1s (20.8 MB/s) 260s Selecting previously unselected package libpython3.13-minimal:arm64. 260s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 260s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ... 260s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 260s Selecting previously unselected package python3.13-minimal. 260s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_arm64.deb ... 260s Unpacking python3.13-minimal (3.13.0-2) ... 260s Selecting previously unselected package libaec0:arm64. 260s Preparing to unpack .../02-libaec0_1.1.3-1_arm64.deb ... 260s Unpacking libaec0:arm64 (1.1.3-1) ... 260s Selecting previously unselected package libblas3:arm64. 260s Preparing to unpack .../03-libblas3_3.12.0-3build2_arm64.deb ... 260s Unpacking libblas3:arm64 (3.12.0-3build2) ... 260s Selecting previously unselected package libgfortran5:arm64. 260s Preparing to unpack .../04-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 260s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 260s Selecting previously unselected package libsz2:arm64. 260s Preparing to unpack .../05-libsz2_1.1.3-1_arm64.deb ... 260s Unpacking libsz2:arm64 (1.1.3-1) ... 260s Selecting previously unselected package libhdf5-103-1t64:arm64. 260s Preparing to unpack .../06-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 260s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 260s Selecting previously unselected package libhdf5-hl-100t64:arm64. 260s Preparing to unpack .../07-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_arm64.deb ... 260s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 260s Selecting previously unselected package liblapack3:arm64. 260s Preparing to unpack .../08-liblapack3_3.12.0-3build2_arm64.deb ... 260s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 260s Selecting previously unselected package liblbfgsb0:arm64. 260s Preparing to unpack .../09-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ... 260s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 261s Selecting previously unselected package liblzf1:arm64. 261s Preparing to unpack .../10-liblzf1_3.6-4_arm64.deb ... 261s Unpacking liblzf1:arm64 (3.6-4) ... 261s Selecting previously unselected package libpython3.13-stdlib:arm64. 261s Preparing to unpack .../11-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 261s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 261s Selecting previously unselected package python3.13. 261s Preparing to unpack .../12-python3.13_3.13.0-2_arm64.deb ... 261s Unpacking python3.13 (3.13.0-2) ... 261s Selecting previously unselected package python3-all. 261s Preparing to unpack .../13-python3-all_3.12.7-1_arm64.deb ... 261s Unpacking python3-all (3.12.7-1) ... 261s Selecting previously unselected package python3-decorator. 261s Preparing to unpack .../14-python3-decorator_5.1.1-5_all.deb ... 261s Unpacking python3-decorator (5.1.1-5) ... 261s Selecting previously unselected package python3-numpy. 261s Preparing to unpack .../15-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 261s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 261s Selecting previously unselected package python3-h5py-serial. 261s Preparing to unpack .../16-python3-h5py-serial_3.11.0-5ubuntu1_arm64.deb ... 261s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 261s Selecting previously unselected package python3-h5py. 261s Preparing to unpack .../17-python3-h5py_3.11.0-5ubuntu1_all.deb ... 261s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 261s Selecting previously unselected package python3-scipy. 261s Preparing to unpack .../18-python3-scipy_1.13.1-5_arm64.deb ... 261s Unpacking python3-scipy (1.13.1-5) ... 262s Selecting previously unselected package python3-six. 262s Preparing to unpack .../19-python3-six_1.16.0-7_all.deb ... 262s Unpacking python3-six (1.16.0-7) ... 262s Selecting previously unselected package python3-h5sparse. 262s Preparing to unpack .../20-python3-h5sparse_0.1.0-7_all.deb ... 262s Unpacking python3-h5sparse (0.1.0-7) ... 262s Selecting previously unselected package autopkgtest-satdep. 262s Preparing to unpack .../21-2-autopkgtest-satdep.deb ... 262s Unpacking autopkgtest-satdep (0) ... 262s Setting up libaec0:arm64 (1.1.3-1) ... 262s Setting up python3-six (1.16.0-7) ... 263s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 263s Setting up python3-decorator (5.1.1-5) ... 263s Setting up libblas3:arm64 (3.12.0-3build2) ... 263s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 263s Setting up liblzf1:arm64 (3.6-4) ... 263s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 263s Setting up python3.13-minimal (3.13.0-2) ... 265s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 265s Setting up libsz2:arm64 (1.1.3-1) ... 265s Setting up liblapack3:arm64 (3.12.0-3build2) ... 265s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 265s Setting up python3.13 (3.13.0-2) ... 266s Setting up python3-all (3.12.7-1) ... 266s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 272s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 272s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 272s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 272s Setting up python3-scipy (1.13.1-5) ... 284s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 284s Setting up python3-h5py (3.11.0-5ubuntu1) ... 285s Setting up python3-h5sparse (0.1.0-7) ... 285s Setting up autopkgtest-satdep (0) ... 285s Processing triggers for systemd (256.5-2ubuntu4) ... 285s Processing triggers for man-db (2.12.1-3) ... 285s Processing triggers for libc-bin (2.40-1ubuntu3) ... 292s (Reading database ... 83177 files and directories currently installed.) 292s Removing autopkgtest-satdep (0) ... 294s autopkgtest [09:25:19]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import h5sparse; print(h5sparse)" ; done 294s autopkgtest [09:25:19]: test autodep8-python3: [----------------------- 294s Testing with python3.13: 294s Traceback (most recent call last): 294s File "/usr/lib/python3/dist-packages/h5py/__init__.py", line 24, in 294s from . import _debian_h5py_serial as _h5py 294s File "/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py", line 25, in 294s from . import _errors 294s ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 294s 294s During handling of the above exception, another exception occurred: 294s 294s Traceback (most recent call last): 294s File "", line 1, in 294s import h5sparse; print(h5sparse) 294s ^^^^^^^^^^^^^^^ 294s File "/usr/lib/python3/dist-packages/h5sparse/__init__.py", line 2, in 294s from .h5sparse import Group, File, Dataset # noqa: F401 294s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 294s File "/usr/lib/python3/dist-packages/h5sparse/h5sparse.py", line 2, in 294s import h5py 294s File "/usr/lib/python3/dist-packages/h5py/__init__.py", line 26, in 294s from . import _debian_h5py_mpi as _h5py 294s ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 295s autopkgtest [09:25:20]: test autodep8-python3: -----------------------] 295s autopkgtest [09:25:20]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 295s autodep8-python3 FAIL non-zero exit status 1 296s autopkgtest [09:25:21]: @@@@@@@@@@@@@@@@@@@@ summary 296s run-unit-test FAIL non-zero exit status 2 296s autodep8-python3 FAIL non-zero exit status 1 313s nova [W] Skipping flock in bos03-arm64 313s Creating nova instance adt-plucky-arm64-h5sparse-20241113-092025-juju-7f2275-prod-proposed-migration-environment-20-8d2c7b24-0b5f-4744-a39e-f21bcd0260b9 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)... 313s nova [W] Skipping flock in bos03-arm64 313s Creating nova instance adt-plucky-arm64-h5sparse-20241113-092025-juju-7f2275-prod-proposed-migration-environment-20-8d2c7b24-0b5f-4744-a39e-f21bcd0260b9 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...