0s autopkgtest [12:12:13]: starting date and time: 2024-11-16 12:12:13+0000 0s autopkgtest [12:12:13]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [12:12:13]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.k_zh2qz8/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:gpaw,src:openmpi --apt-upgrade gpaw --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=gpaw/24.6.0-1build1 openmpi/5.0.5-3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-16.secgroup --name adt-plucky-arm64-gpaw-20241116-121213-juju-7f2275-prod-proposed-migration-environment-15-2df21a97-92fc-4009-847f-7e96bafad9aa --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 61s autopkgtest [12:13:14]: testbed dpkg architecture: arm64 61s autopkgtest [12:13:14]: testbed apt version: 2.9.8 61s autopkgtest [12:13:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 62s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 62s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 62s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1021 kB] 63s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [94.9 kB] 63s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 63s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [172 kB] 63s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 63s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [797 kB] 63s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [6404 B] 63s Fetched 2238 kB in 1s (2402 kB/s) 63s Reading package lists... 65s Reading package lists... 66s Building dependency tree... 66s Reading state information... 66s Calculating upgrade... 67s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 67s Reading package lists... 67s Building dependency tree... 67s Reading state information... 67s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 68s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 68s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 68s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 68s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 69s Reading package lists... 69s Reading package lists... 69s Building dependency tree... 69s Reading state information... 70s Calculating upgrade... 70s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 70s Reading package lists... 71s Building dependency tree... 71s Reading state information... 71s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 74s autopkgtest [12:13:27]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 74s autopkgtest [12:13:27]: @@@@@@@@@@@@@@@@@@@@ apt-source gpaw 76s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe gpaw 24.6.0-1build1 (dsc) [2289 B] 76s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe gpaw 24.6.0-1build1 (tar) [2829 kB] 76s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe gpaw 24.6.0-1build1 (diff) [9784 B] 76s gpgv: Signature made Thu Nov 14 18:30:01 2024 UTC 76s gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 76s gpgv: Can't check signature: No public key 76s dpkg-source: warning: cannot verify inline signature for ./gpaw_24.6.0-1build1.dsc: no acceptable signature found 76s autopkgtest [12:13:29]: testing package gpaw version 24.6.0-1build1 77s autopkgtest [12:13:30]: build not needed 78s autopkgtest [12:13:31]: test serial: preparing testbed 80s Reading package lists... 80s Building dependency tree... 80s Reading state information... 81s Starting pkgProblemResolver with broken count: 0 81s Starting 2 pkgProblemResolver with broken count: 0 81s Done 82s The following additional packages will be installed: 82s blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 82s fonts-glyphicons-halflings fonts-lyx gpaw gpaw-data libamd-comgr2 82s libamdhip64-5 libblas3 libdeflate0 libdrm-amdgpu1 libelpa19 82s libevent-pthreads-2.1-7t64 libfabric1 libfftw3-double3 libfontconfig1 82s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhsa-runtime64-1 82s libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 libibumad3 libimagequant0 82s libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery 82s libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libllvm17t64 82s libmunge2 libopenjp2-7 libopenmpi3t64 libpciaccess0 libpmix2t64 82s libqhull-r8.0 libraqm0 librdmacm1t64 libscalapack-openmpi2.2 libsharpyuv0 82s libsymspg2 libtcl8.6 libtiff6 libtk8.6 libucx0 libwebp7 libwebpdemux2 82s libwebpmux3 libxc9 libxft2 libxnvctrl0 libxrender1 libxslt1.1 libxss1 82s mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common 82s python-matplotlib-data python3-all python3-appdirs python3-ase 82s python3-brotli python3-contourpy python3-cycler python3-dateutil 82s python3-decorator python3-fonttools python3-fs python3-kiwisolver 82s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-numpy 82s python3-packaging python3-pil python3-pil.imagetk python3-scipy python3-six 82s python3-spglib python3-sympy python3-tk python3-tz python3-ufolib2 82s python3-unicodedata2 python3.12-tk tk8.6-blt2.5 unicode-data x11-common 82s Suggested packages: 82s blt-demo libfftw3-bin libfftw3-dev libjs-jquery-ui-docs liblcms2-utils 82s scalapack-doc tcl8.6 tk8.6 opencl-icd gfortran | fortran-compiler 82s python-ase-doc python3-netcdf4 python3-pycodcif python-cycler-doc 82s python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript 82s gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python-matplotlib-doc 82s python3-cairocffi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip 82s python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc 82s python3-gmpy2 gcc gfortran python-numpy-doc python3-dev python3-pytest 82s python-pil-doc python-scipy-doc texlive-fonts-extra python-sympy-doc tix 82s python3-tk-dbg python3.13-tk 82s Recommended packages: 82s javascript-common python3-bs4 python3-cssselect python3-html5lib 82s python3-olefile g++ | c++-compiler isympy-common 82s The following NEW packages will be installed: 82s autopkgtest-satdep blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono 82s fonts-font-awesome fonts-glyphicons-halflings fonts-lyx gpaw gpaw-data 82s libamd-comgr2 libamdhip64-5 libblas3 libdeflate0 libdrm-amdgpu1 libelpa19 82s libevent-pthreads-2.1-7t64 libfabric1 libfftw3-double3 libfontconfig1 82s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhsa-runtime64-1 82s libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 libibumad3 libimagequant0 82s libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery 82s libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libllvm17t64 82s libmunge2 libopenjp2-7 libopenmpi3t64 libpciaccess0 libpmix2t64 82s libqhull-r8.0 libraqm0 librdmacm1t64 libscalapack-openmpi2.2 libsharpyuv0 82s libsymspg2 libtcl8.6 libtiff6 libtk8.6 libucx0 libwebp7 libwebpdemux2 82s libwebpmux3 libxc9 libxft2 libxnvctrl0 libxrender1 libxslt1.1 libxss1 82s mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common 82s python-matplotlib-data python3-all python3-appdirs python3-ase 82s python3-brotli python3-contourpy python3-cycler python3-dateutil 82s python3-decorator python3-fonttools python3-fs python3-kiwisolver 82s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-numpy 82s python3-packaging python3-pil python3-pil.imagetk python3-scipy python3-six 82s python3-spglib python3-sympy python3-tk python3-tz python3-ufolib2 82s python3-unicodedata2 python3.12-tk tk8.6-blt2.5 unicode-data x11-common 82s 0 upgraded, 102 newly installed, 0 to remove and 0 not upgraded. 82s Need to get 174 MB/174 MB of archives. 82s After this operation, 556 MB of additional disk space will be used. 82s Get:1 /tmp/autopkgtest.TJ8IrG/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [712 B] 82s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [987 kB] 82s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 82s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 82s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 fontconfig-config arm64 2.15.0-1.1ubuntu2 [37.4 kB] 82s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 libfontconfig1 arm64 2.15.0-1.1ubuntu2 [142 kB] 82s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 82s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 82s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 82s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 82s Get:11 http://ftpmaster.internal/ubuntu plucky/main arm64 libtk8.6 arm64 8.6.15-1 [774 kB] 83s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7build1 [618 kB] 83s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 blt arm64 2.5.3+dfsg-7build1 [4840 B] 83s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 83s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 83s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 fonts-lyx all 2.4.2.1-1 [171 kB] 83s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 gpaw-data all 24.1.0-1 [53.5 MB] 85s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc15 arm64 2.11.2-1 [162 kB] 85s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B] 85s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 librdmacm1t64 arm64 52.0-2ubuntu1 [71.5 kB] 85s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfabric1 arm64 1.17.0-3ubuntu1 [542 kB] 85s Get:22 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmunge2 arm64 0.5.15-4build1 [14.9 kB] 85s Get:23 http://ftpmaster.internal/ubuntu plucky/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB] 85s Get:24 http://ftpmaster.internal/ubuntu plucky/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB] 85s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB] 85s Get:26 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc-plugins arm64 2.11.2-1 [15.8 kB] 85s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpmix2t64 arm64 5.0.3-2 [662 kB] 85s Get:28 http://ftpmaster.internal/ubuntu plucky/universe arm64 libllvm17t64 arm64 1:17.0.6-18 [24.9 MB] 85s Get:29 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB] 86s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [20.9 kB] 86s Get:31 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB] 86s Get:32 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB] 86s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamdhip64-5 arm64 5.7.1-5 [9704 kB] 86s Get:34 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB] 86s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 libibumad3 arm64 52.0-2ubuntu1 [29.3 kB] 86s Get:36 http://ftpmaster.internal/ubuntu plucky/main arm64 libibmad5 arm64 52.0-2ubuntu1 [43.1 kB] 86s Get:37 http://ftpmaster.internal/ubuntu plucky/universe arm64 libucx0 arm64 1.17.0+ds-3build1 [1093 kB] 86s Get:38 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 libopenmpi3t64 arm64 5.0.5-3 [2040 kB] 86s Get:39 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 openmpi-common all 5.0.5-3 [95.6 kB] 86s Get:40 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 openmpi-bin arm64 5.0.5-3 [152 kB] 86s Get:41 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 86s Get:42 http://ftpmaster.internal/ubuntu plucky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 86s Get:43 http://ftpmaster.internal/ubuntu plucky/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 86s Get:44 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 86s Get:45 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 86s Get:46 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 86s Get:47 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 86s Get:48 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 86s Get:49 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 86s Get:50 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-scipy arm64 1.13.1-5 [16.3 MB] 87s Get:51 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsymspg2 arm64 2.4.0-1ubuntu1 [209 kB] 87s Get:52 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-spglib arm64 2.4.0-1ubuntu1 [29.5 kB] 87s Get:53 http://ftpmaster.internal/ubuntu plucky/universe arm64 python-matplotlib-data all 3.8.3-3 [2928 kB] 87s Get:54 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-six all 1.16.0-7 [13.1 kB] 87s Get:55 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-dateutil all 2.9.0-2 [80.3 kB] 87s Get:56 http://ftpmaster.internal/ubuntu plucky/main arm64 libimagequant0 arm64 2.18.0-1build1 [37.1 kB] 87s Get:57 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu2 [163 kB] 87s Get:58 http://ftpmaster.internal/ubuntu plucky/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 87s Get:59 http://ftpmaster.internal/ubuntu plucky/main arm64 liblcms2-2 arm64 2.16-2 [170 kB] 87s Get:60 http://ftpmaster.internal/ubuntu plucky/main arm64 libopenjp2-7 arm64 2.5.0-2ubuntu1 [182 kB] 87s Get:61 http://ftpmaster.internal/ubuntu plucky/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 87s Get:62 http://ftpmaster.internal/ubuntu plucky/main arm64 libharfbuzz0b arm64 10.0.1-1 [487 kB] 87s Get:63 http://ftpmaster.internal/ubuntu plucky/main arm64 libraqm0 arm64 0.10.1-1build1 [14.7 kB] 87s Get:64 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB] 87s Get:65 http://ftpmaster.internal/ubuntu plucky/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 87s Get:66 http://ftpmaster.internal/ubuntu plucky/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu2 [154 kB] 87s Get:67 http://ftpmaster.internal/ubuntu plucky/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [16.3 kB] 87s Get:68 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebp7 arm64 1.4.0-0.1 [192 kB] 87s Get:69 http://ftpmaster.internal/ubuntu plucky/main arm64 libtiff6 arm64 4.5.1+git230720-4ubuntu4 [193 kB] 87s Get:70 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebpdemux2 arm64 1.4.0-0.1 [12.3 kB] 87s Get:71 http://ftpmaster.internal/ubuntu plucky/main arm64 libwebpmux3 arm64 1.4.0-0.1 [25.1 kB] 87s Get:72 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-pil arm64 10.4.0-1ubuntu1 [456 kB] 87s Get:73 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.12-tk arm64 3.12.7-3 [115 kB] 87s Get:74 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tk arm64 3.12.6-1ubuntu1 [9806 B] 87s Get:75 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pil.imagetk arm64 10.4.0-1ubuntu1 [9504 B] 87s Get:76 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-contourpy arm64 1.3.0-2build1 [220 kB] 87s Get:77 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-cycler all 0.12.1-1 [9716 B] 87s Get:78 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-brotli arm64 1.1.0-2build2 [340 kB] 87s Get:79 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 87s Get:80 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-mpmath all 1.3.0-1 [425 kB] 87s Get:81 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-sympy all 1.13.3-1 [4228 kB] 87s Get:82 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-tz all 2024.1-2 [31.4 kB] 87s Get:83 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB] 87s Get:84 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fs all 2.4.16-4 [91.3 kB] 87s Get:85 http://ftpmaster.internal/ubuntu plucky/main arm64 libxslt1.1 arm64 1.1.39-0exp1ubuntu1 [167 kB] 87s Get:86 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-lxml arm64 5.3.0-1 [1205 kB] 87s Get:87 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build4 [26.7 kB] 87s Get:88 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-unicodedata2 arm64 15.1.0+ds-1build2 [360 kB] 87s Get:89 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all arm64 3.12.6-0ubuntu1 [886 B] 87s Get:90 http://ftpmaster.internal/ubuntu plucky/universe arm64 unicode-data all 15.1.0-1 [8878 kB] 87s Get:91 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-fonttools arm64 4.46.0-1build2 [1398 kB] 87s Get:92 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-kiwisolver arm64 1.4.7-2build1 [62.0 kB] 87s Get:93 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 87s Get:94 http://ftpmaster.internal/ubuntu plucky/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB] 87s Get:95 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-matplotlib arm64 3.8.3-3 [4515 kB] 87s Get:96 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-ase all 3.23.0-1 [1754 kB] 87s Get:97 http://ftpmaster.internal/ubuntu plucky/universe arm64 mpi-default-bin arm64 1.17 [2296 B] 87s Get:98 http://ftpmaster.internal/ubuntu plucky/universe arm64 libscalapack-openmpi2.2 arm64 2.2.1-3.1ubuntu2 [1610 kB] 88s Get:99 http://ftpmaster.internal/ubuntu plucky/universe arm64 libelpa19 arm64 2022.11.001-3build1 [457 kB] 88s Get:100 http://ftpmaster.internal/ubuntu plucky/main arm64 libfftw3-double3 arm64 3.3.10-1ubuntu4 [392 kB] 88s Get:101 http://ftpmaster.internal/ubuntu plucky/universe arm64 libxc9 arm64 5.2.3-1ubuntu1 [4109 kB] 88s Get:102 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 gpaw arm64 24.6.0-1build1 [1518 kB] 88s Fetched 174 MB in 6s (29.0 MB/s) 88s Selecting previously unselected package libtcl8.6:arm64. 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79964 files and directories currently installed.) 88s Preparing to unpack .../000-libtcl8.6_8.6.15+dfsg-2_arm64.deb ... 88s Unpacking libtcl8.6:arm64 (8.6.15+dfsg-2) ... 89s Selecting previously unselected package fonts-dejavu-mono. 89s Preparing to unpack .../001-fonts-dejavu-mono_2.37-8_all.deb ... 89s Unpacking fonts-dejavu-mono (2.37-8) ... 89s Selecting previously unselected package fonts-dejavu-core. 89s Preparing to unpack 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liblapack3:arm64 (3.12.0-3build2) ... 92s Selecting previously unselected package python3-numpy. 92s Preparing to unpack .../045-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 92s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 92s Selecting previously unselected package python3-decorator. 92s Preparing to unpack .../046-python3-decorator_5.1.1-5_all.deb ... 92s Unpacking python3-decorator (5.1.1-5) ... 92s Selecting previously unselected package liblbfgsb0:arm64. 92s Preparing to unpack .../047-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ... 92s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 92s Selecting previously unselected package python3-scipy. 92s Preparing to unpack .../048-python3-scipy_1.13.1-5_arm64.deb ... 92s Unpacking python3-scipy (1.13.1-5) ... 93s Selecting previously unselected package libsymspg2:arm64. 93s Preparing to unpack .../049-libsymspg2_2.4.0-1ubuntu1_arm64.deb ... 93s Unpacking libsymspg2:arm64 (2.4.0-1ubuntu1) ... 93s Selecting previously unselected 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libfftw3-double3:arm64 (3.3.10-1ubuntu4) ... 95s Selecting previously unselected package libxc9:arm64. 95s Preparing to unpack .../099-libxc9_5.2.3-1ubuntu1_arm64.deb ... 95s Unpacking libxc9:arm64 (5.2.3-1ubuntu1) ... 95s Selecting previously unselected package gpaw. 95s Preparing to unpack .../100-gpaw_24.6.0-1build1_arm64.deb ... 95s Unpacking gpaw (24.6.0-1build1) ... 96s Selecting previously unselected package autopkgtest-satdep. 96s Preparing to unpack .../101-1-autopkgtest-satdep.deb ... 96s Unpacking autopkgtest-satdep (0) ... 96s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 96s Setting up liblcms2-2:arm64 (2.16-2) ... 96s Setting up libsharpyuv0:arm64 (1.4.0-0.1) ... 96s Setting up libpciaccess0:arm64 (0.17-3build1) ... 96s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu2) ... 96s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 96s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 96s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 96s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 96s Setting up python3-unicodedata2 (15.1.0+ds-1build2) ... 96s Setting up fonts-lyx (2.4.2.1-1) ... 96s Setting up x11-common (1:7.7+23ubuntu3) ... 96s Setting up libibumad3:arm64 (52.0-2ubuntu1) ... 96s Setting up libdeflate0:arm64 (1.22-1) ... 96s Setting up libqhull-r8.0:arm64 (2020.2-6build1) ... 96s Setting up python3-all (3.12.6-0ubuntu1) ... 96s Setting up libibmad5:arm64 (52.0-2ubuntu1) ... 96s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ... 96s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ... 96s Setting up python3-tz (2024.1-2) ... 96s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 96s Setting up unicode-data (15.1.0-1) ... 96s Setting up libsymspg2:arm64 (2.4.0-1ubuntu1) ... 96s Setting up python3-six (1.16.0-7) ... 96s Setting up python3-decorator (5.1.1-5) ... 97s Setting up libblas3:arm64 (3.12.0-3build2) ... 97s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 97s Setting up python3-packaging (24.1-1) ... 97s Setting up libmunge2:arm64 (0.5.15-4build1) ... 97s Setting up libllvm17t64:arm64 (1:17.0.6-18) ... 97s Setting up gpaw-data (24.1.0-1) ... 97s Setting up python3-brotli (1.1.0-2build2) ... 97s Setting up python3-cycler (0.12.1-1) ... 97s Setting up libimagequant0:arm64 (2.18.0-1build1) ... 97s Setting up fonts-dejavu-mono (2.37-8) ... 97s Setting up python3-kiwisolver (1.4.7-2build1) ... 97s Setting up libhwloc15:arm64 (2.11.2-1) ... 97s Setting up libtcl8.6:arm64 (8.6.15+dfsg-2) ... 97s Setting up fonts-dejavu-core (2.37-8) ... 97s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu2) ... 97s Setting up libfftw3-double3:arm64 (3.3.10-1ubuntu4) ... 97s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 97s Setting up libwebp7:arm64 (1.4.0-0.1) ... 97s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 97s Setting up libxslt1.1:arm64 (1.1.39-0exp1ubuntu1) ... 97s Setting up openmpi-common (5.0.5-3) ... 97s Setting up librdmacm1t64:arm64 (52.0-2ubuntu1) ... 97s Setting up libopenjp2-7:arm64 (2.5.0-2ubuntu1) ... 97s Setting up libharfbuzz0b:arm64 (10.0.1-1) ... 97s Setting up python3-dateutil (2.9.0-2) ... 97s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 97s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 97s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 97s Setting up python3-mpmath (1.3.0-1) ... 98s Setting up python-matplotlib-data (3.8.3-3) ... 98s Setting up libwebpmux3:arm64 (1.4.0-0.1) ... 98s Setting up python3-appdirs (1.4.4-4) ... 98s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 98s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 98s Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ... 98s Setting up libxc9:arm64 (5.2.3-1ubuntu1) ... 98s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 98s Setting up libfabric1:arm64 (1.17.0-3ubuntu1) ... 98s Setting up python3-sympy (1.13.3-1) ... 105s Setting up liblapack3:arm64 (3.12.0-3build2) ... 105s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 105s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 105s Setting up libwebpdemux2:arm64 (1.4.0-0.1) ... 105s Setting up libhwloc-plugins:arm64 (2.11.2-1) ... 105s Setting up python3-fs (2.4.16-4) ... 105s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 105s Setting up libraqm0:arm64 (0.10.1-1build1) ... 105s Setting up libpmix2t64:arm64 (5.0.3-2) ... 105s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 107s Setting up python3-lxml:arm64 (5.3.0-1) ... 107s Setting up libtiff6:arm64 (4.5.1+git230720-4ubuntu4) ... 107s Setting up python3-contourpy (1.3.0-2build1) ... 107s Setting up libfontconfig1:arm64 (2.15.0-1.1ubuntu2) ... 107s Setting up python3-spglib (2.4.0-1ubuntu1) ... 108s Setting up libhsakmt1:arm64 (5.7.0-1build1) ... 108s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 108s Setting up libxft2:arm64 (2.3.6-1build1) ... 108s Setting up python3-scipy (1.13.1-5) ... 111s Setting up libtk8.6:arm64 (8.6.15-1) ... 111s Setting up python3.12-tk (3.12.7-3) ... 111s Setting up python3-pil:arm64 (10.4.0-1ubuntu1) ... 111s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 111s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 111s Setting up blt (2.5.3+dfsg-7build1) ... 112s Setting up python3-tk:arm64 (3.12.6-1ubuntu1) ... 112s Setting up libamdhip64-5 (5.7.1-5) ... 112s Setting up python3-pil.imagetk:arm64 (10.4.0-1ubuntu1) ... 112s Setting up libucx0:arm64 (1.17.0+ds-3build1) ... 112s Setting up libopenmpi3t64:arm64 (5.0.5-3) ... 112s Setting up openmpi-bin (5.0.5-3) ... 112s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 112s update-alternatives: warning: skip creation of /usr/share/man/man1/mpirun.1.gz because associated file /usr/share/man/man1/mpirun.openmpi.1.gz (of link group mpirun) doesn't exist 112s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 112s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 112s Setting up mpi-default-bin (1.17) ... 112s Setting up libscalapack-openmpi2.2:arm64 (2.2.1-3.1ubuntu2) ... 112s Setting up libelpa19 (2022.11.001-3build1) ... 112s Setting up python3-fonttools (4.46.0-1build2) ... 113s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... 113s Setting up python3-matplotlib (3.8.3-3) ... 114s Setting up python3-ase (3.23.0-1) ... 116s Setting up gpaw (24.6.0-1build1) ... 118s Setting up autopkgtest-satdep (0) ... 118s Processing triggers for libc-bin (2.40-1ubuntu3) ... 118s Processing triggers for man-db (2.13.0-1) ... 124s (Reading database ... 90714 files and directories currently installed.) 124s Removing autopkgtest-satdep (0) ... 124s autopkgtest [12:14:17]: test serial: for py in $(py3versions -s); do cd "$AUTOPKGTEST_TMP"; $py -m gpaw test; done 124s autopkgtest [12:14:17]: test serial: [----------------------- 125s ----------------------------------------------------------------------------------------- 125s | python-3.12.7 /usr/bin/python3.12 | 125s | gpaw-24.6.0 /usr/lib/python3/dist-packages/gpaw/ | 125s | ase-3.23.0 /usr/lib/python3/dist-packages/ase/ | 125s | numpy-1.26.4 /usr/lib/python3/dist-packages/numpy/ | 125s | scipy-1.13.1 /usr/lib/python3/dist-packages/scipy/ | 125s | libxc-5.2.3 yes | 125s | _gpaw /usr/lib/python3/dist-packages/_gpaw.cpython-312-aarch64-linux-gnu.so | 125s | MPI enabled yes | 125s | OpenMP enabled no | 125s | GPU enabled no | 125s | GPU-aware MPI no | 125s | CUPY /usr/lib/python3/dist-packages/gpaw/gpu/cpupy/__init__.py | 125s | scalapack yes | 125s | Elpa yes; version: 20221109 | 125s | FFTW yes | 125s | libvdwxc no | 125s | PAW-datasets (1) /usr/local/share/gpaw-setups | 125s | PAW-datasets (2) /usr/share/gpaw-setups | 125s ----------------------------------------------------------------------------------------- 125s Doing a test calculation (cores: 1): ... Done 125s 125s Test parallel calculation with "gpaw -P 4 test". 126s autopkgtest [12:14:19]: test serial: -----------------------] 128s autopkgtest [12:14:21]: test serial: - - - - - - - - - - results - - - - - - - - - - 128s serial PASS 128s autopkgtest [12:14:21]: test parallel: preparing testbed 130s Reading package lists... 130s Building dependency tree... 130s Reading state information... 130s Starting pkgProblemResolver with broken count: 0 130s Starting 2 pkgProblemResolver with broken count: 0 130s Done 131s The following NEW packages will be installed: 131s autopkgtest-satdep 131s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 131s Need to get 0 B/708 B of archives. 131s After this operation, 0 B of additional disk space will be used. 131s Get:1 /tmp/autopkgtest.TJ8IrG/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [708 B] 131s Selecting previously unselected package autopkgtest-satdep. 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 90714 files and directories currently installed.) 131s Preparing to unpack .../2-autopkgtest-satdep.deb ... 131s Unpacking autopkgtest-satdep (0) ... 131s Setting up autopkgtest-satdep (0) ... 134s (Reading database ... 90714 files and directories currently installed.) 134s Removing autopkgtest-satdep (0) ... 134s autopkgtest [12:14:27]: test parallel: for py in $(py3versions -s); do cd "$AUTOPKGTEST_TMP"; OMPI_MCA_rmaps_base_oversubscribe=1 $py -m gpaw -P 4 test; done 134s autopkgtest [12:14:27]: test parallel: [----------------------- 135s -------------------------------------------------------------------------- 135s There are not enough slots available in the system to satisfy the 4 135s slots that were requested by the application: 135s 135s /usr/bin/python3.12 135s 135s Either request fewer procs for your application, or make more slots 135s available for use. 135s 135s A "slot" is the PRRTE term for an allocatable unit where we can 135s launch a process. The number of slots available are defined by the 135s environment in which PRRTE processes are run: 135s 135s 1. Hostfile, via "slots=N" clauses (N defaults to number of 135s processor cores if not provided) 135s 2. The --host command line parameter, via a ":N" suffix on the 135s hostname (N defaults to 1 if not provided) 135s 3. Resource manager (e.g., SLURM, PBS/Torque, LSF, etc.) 135s 4. If none of a hostfile, the --host command line parameter, or an 135s RM is present, PRRTE defaults to the number of processor cores 135s 135s In all the above cases, if you want PRRTE to default to the number 135s of hardware threads instead of the number of processor cores, use the 135s --use-hwthread-cpus option. 135s 135s Alternatively, you can use the --map-by :OVERSUBSCRIBE option to ignore the 135s number of available slots when deciding the number of processes to 135s launch. 135s -------------------------------------------------------------------------- 136s parallel FAIL non-zero exit status 1 136s autopkgtest [12:14:29]: test parallel: - - - - - - - - - - results - - - - - - - - - - 136s autopkgtest [12:14:29]: @@@@@@@@@@@@@@@@@@@@ summary 136s serial PASS 136s parallel FAIL non-zero exit status 1 141s nova [W] Skipping flock in bos03-arm64 141s Creating nova instance adt-plucky-arm64-gpaw-20241116-121213-juju-7f2275-prod-proposed-migration-environment-15-2df21a97-92fc-4009-847f-7e96bafad9aa from image adt/ubuntu-plucky-arm64-server-20241116.img (UUID b01758a6-21f8-4caa-9834-062ee0544e32)...